DNA polymerase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 235 |
| AccI | GTMKAC | 1 cut(s) | 810 |
| AccII | CGCG | 1 cut(s) | 454 |
| AclWI | GGATC | 4 cut(s) | 257, 270, 302, 315 |
| AcsI | RAATTY | 3 cut(s) | 508, 551, 913 |
| AfaI | GTAC | 1 cut(s) | 252 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 197 |
| AflIII | ACRYGT | 1 cut(s) | 830 |
| AgsI | TTSAA | 2 cut(s) | 507, 652 |
| AjiI | CACGTC | 1 cut(s) | 808 |
| AluBI | AGCT | 5 cut(s) | 139, 527, 543, 596, 871 |
| AluI | AGCT | 5 cut(s) | 139, 527, 543, 596, 871 |
| Alw21I | GWGCWC | 2 cut(s) | 352, 796 |
| Alw26I | GTCTC | 2 cut(s) | 595, 697 |
| Alw44I | GTGCAC | 1 cut(s) | 792 |
| AlwI | GGATC | 4 cut(s) | 257, 270, 302, 315 |
| AoxI | GGCC | 1 cut(s) | 720 |
| ApaLI | GTGCAC | 1 cut(s) | 792 |
| ApeKI | GCWGC | 1 cut(s) | 449 |
| ApoI | RAATTY | 3 cut(s) | 508, 551, 913 |
| AspLEI | GCGC | 1 cut(s) | 454 |
| AspS9I | GGNCC | 1 cut(s) | 485 |
| AsuC2I | CCSGG | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 1 cut(s) | 571 |
| AsuNHI | GCTAGC | 1 cut(s) | 203 |
| AvaII | GGWCC | 1 cut(s) | 485 |
| BaeGI | GKGCMC | 1 cut(s) | 796 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 170, 203 |
| BamHI | GGATCC | 2 cut(s) | 262, 307 |
| Bbv12I | GWGCWC | 2 cut(s) | 352, 796 |
| BbvI | GCAGC | 1 cut(s) | 461 |
| BccI | CCATC | 1 cut(s) | 524 |
| BciVI | GTATCC | 1 cut(s) | 198 |
| BcnI | CCSGG | 1 cut(s) | 24 |
| BcoDI | GTCTC | 2 cut(s) | 595, 697 |
| BfaI | CTAG | 3 cut(s) | 204, 735, 965 |
| BfmI | CTRYAG | 1 cut(s) | 612 |
| BfuAI | ACCTGC | 1 cut(s) | 235 |
| BfuI | GTATCC | 1 cut(s) | 198 |
| BglII | AGATCT | 1 cut(s) | 325 |
| BisI | GCNGC | 1 cut(s) | 450 |
| BlsI | GCNGC | 1 cut(s) | 451 |
| Bme1390I | CCNGG | 1 cut(s) | 24 |
| Bme18I | GGWCC | 1 cut(s) | 485 |
| BmgBI | CACGTC | 1 cut(s) | 808 |
| BmgT120I | GGNCC | 1 cut(s) | 485 |
| BmiI | GGNNCC | 2 cut(s) | 264, 309 |
| BmrFI | CCNGG | 1 cut(s) | 24 |
| BmrI | ACTGGG | 1 cut(s) | 823 |
| BmsI | GCATC | 2 cut(s) | 235, 707 |
| BmtI | GCTAGC | 1 cut(s) | 207 |
| BmuI | ACTGGG | 1 cut(s) | 823 |
| BpmI | CTGGAG | 1 cut(s) | 293 |
| BpuEI | CTTGAG | 1 cut(s) | 609 |
| BpuMI | CCSGG | 1 cut(s) | 24 |
| BsaI | GGTCTC | 1 cut(s) | 595 |
| BsaJI | CCNNGG | 2 cut(s) | 23, 723 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 197 |
| Bse1I | ACTGG | 2 cut(s) | 276, 818 |
| Bse3DI | GCAATG | 2 cut(s) | 61, 927 |
| BseDI | CCNNGG | 2 cut(s) | 23, 723 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 197 |
| BseMI | GCAATG | 2 cut(s) | 61, 927 |
| BseMII | CTCAG | 1 cut(s) | 606 |
| BseNI | ACTGG | 2 cut(s) | 276, 818 |
| BseSI | GKGCMC | 1 cut(s) | 796 |
| BseXI | GCAGC | 1 cut(s) | 461 |
| BseYI | CCCAGC | 1 cut(s) | 523 |
| BsgI | GTGCAG | 1 cut(s) | 252 |
| Bsh1236I | CGCG | 1 cut(s) | 454 |
| BshFI | GGCC | 1 cut(s) | 722 |
| BsiHKAI | GWGCWC | 2 cut(s) | 352, 796 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 197 |
| BsmAI | GTCTC | 2 cut(s) | 595, 697 |
| BsmI | GAATGC | 1 cut(s) | 574 |
| BsnI | GGCC | 1 cut(s) | 722 |
| Bso31I | GGTCTC | 1 cut(s) | 595 |
| Bsp1286I | GDGCHC | 2 cut(s) | 352, 796 |
| Bsp1407I | TGTACA | 1 cut(s) | 250 |
| Bsp143I | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| BspANI | GGCC | 1 cut(s) | 722 |
| BspCNI | CTCAG | 1 cut(s) | 605 |
| BspFNI | CGCG | 1 cut(s) | 454 |
| BspLI | GGNNCC | 2 cut(s) | 264, 309 |
| BspMI | ACCTGC | 1 cut(s) | 235 |
| BspOI | GCTAGC | 1 cut(s) | 207 |
| BspPI | GGATC | 4 cut(s) | 257, 270, 302, 315 |
| BspTNI | GGTCTC | 1 cut(s) | 595 |
| BsrDI | GCAATG | 2 cut(s) | 61, 927 |
| BsrGI | TGTACA | 1 cut(s) | 250 |
| BsrI | ACTGG | 2 cut(s) | 276, 818 |
| BssECI | CCNNGG | 2 cut(s) | 23, 723 |
| BssMI | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| BssT1I | CCWWGG | 1 cut(s) | 723 |
| Bst4CI | ACNGT | 4 cut(s) | 131, 403, 613, 981 |
| BstAUI | TGTACA | 1 cut(s) | 250 |
| BstC8I | GCNNGC | 1 cut(s) | 205 |
| BstDEI | CTNAG | 3 cut(s) | 33, 74, 592 |
| BstFNI | CGCG | 1 cut(s) | 454 |
| BstHHI | GCGC | 1 cut(s) | 454 |
| BstKTI | GATC | 5 cut(s) | 258, 265, 310, 328, 564 |
| BstMAI | GTCTC | 2 cut(s) | 595, 697 |
| BstMBI | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| BstNSI | RCATGY | 1 cut(s) | 834 |
| BstSCI | CCNGG | 1 cut(s) | 22 |
| BstSFI | CTRYAG | 1 cut(s) | 612 |
| BstSLI | GKGCMC | 1 cut(s) | 796 |
| BstUI | CGCG | 1 cut(s) | 454 |
| BstV1I | GCAGC | 1 cut(s) | 461 |
| BstX2I | RGATCY | 3 cut(s) | 262, 307, 325 |
| BstYI | RGATCY | 3 cut(s) | 262, 307, 325 |
| BsuI | GTATCC | 1 cut(s) | 198 |
| BsuRI | GGCC | 1 cut(s) | 722 |
| BtrI | CACGTC | 1 cut(s) | 808 |
| BtsI | GCAGTG | 1 cut(s) | 749 |
| BtsIMutI | CAGTG | 4 cut(s) | 202, 269, 749, 986 |
| BveI | ACCTGC | 1 cut(s) | 235 |
| Cac8I | GCNNGC | 1 cut(s) | 205 |
| CfoI | GCGC | 1 cut(s) | 454 |
| Cfr13I | GGNCC | 1 cut(s) | 485 |
| CseI | GACGC | 1 cut(s) | 196 |
| Csp6I | GTAC | 1 cut(s) | 251 |
| CviAII | CATG | 3 cut(s) | 259, 826, 831 |
| CviJI | RGCY | 8 cut(s) | 32, 139, 496, 527, 543, 596, 722, 871 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 139, 496, 527, 543, 596, 722, 871 |
| CviQI | GTAC | 1 cut(s) | 251 |
| DdeI | CTNAG | 3 cut(s) | 33, 74, 592 |
| DpnI | GATC | 5 cut(s) | 257, 264, 309, 327, 563 |
| DpnII | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| Eco130I | CCWWGG | 1 cut(s) | 723 |
| Eco31I | GGTCTC | 1 cut(s) | 595 |
| Eco47I | GGWCC | 1 cut(s) | 485 |
| EcoO109I | RGGNCCY | 1 cut(s) | 485 |
| EcoT14I | CCWWGG | 1 cut(s) | 723 |
| ErhI | CCWWGG | 1 cut(s) | 723 |
| FaeI | CATG | 3 cut(s) | 262, 829, 834 |
| FatI | CATG | 3 cut(s) | 258, 825, 830 |
| FblI | GTMKAC | 1 cut(s) | 810 |
| Fnu4HI | GCNGC | 1 cut(s) | 450 |
| Fsp4HI | GCNGC | 1 cut(s) | 450 |
| FspBI | CTAG | 3 cut(s) | 204, 735, 965 |
| GlaI | GCGC | 1 cut(s) | 453 |
| GluI | GCNGC | 1 cut(s) | 450 |
| GsaI | CCCAGC | 1 cut(s) | 527 |
| GsuI | CTGGAG | 1 cut(s) | 293 |
| HaeIII | GGCC | 1 cut(s) | 722 |
| HapII | CCGG | 1 cut(s) | 23 |
| HgaI | GACGC | 1 cut(s) | 196 |
| HhaI | GCGC | 1 cut(s) | 454 |
| Hin1II | CATG | 3 cut(s) | 262, 829, 834 |
| Hin6I | GCGC | 1 cut(s) | 452 |
| HinP1I | GCGC | 1 cut(s) | 452 |
| HincII | GTYRAC | 1 cut(s) | 682 |
| HindII | GTYRAC | 1 cut(s) | 682 |
| HindIII | AAGCTT | 1 cut(s) | 869 |
| HinfI | GANTC | 2 cut(s) | 19, 738 |
| HpaI | GTTAAC | 1 cut(s) | 682 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 1 cut(s) | 571 |
| Hpy166II | GTNNAC | 4 cut(s) | 406, 682, 794, 811 |
| Hpy188I | TCNGA | 3 cut(s) | 124, 231, 576 |
| Hpy188III | TCNNGA | 2 cut(s) | 305, 565 |
| Hpy8I | GTNNAC | 4 cut(s) | 406, 682, 794, 811 |
| HpyAV | CCTTC | 2 cut(s) | 286, 498 |
| HpyCH4III | ACNGT | 4 cut(s) | 131, 403, 613, 981 |
| HpyCH4IV | ACGT | 1 cut(s) | 807 |
| HpyCH4V | TGCA | 8 cut(s) | 175, 269, 449, 549, 641, 698, 794, 805 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 74, 592 |
| HpySE526I | ACGT | 1 cut(s) | 807 |
| Hsp92II | CATG | 3 cut(s) | 262, 829, 834 |
| HspAI | GCGC | 1 cut(s) | 452 |
| KspAI | GTTAAC | 1 cut(s) | 682 |
| Kzo9I | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| LmnI | GCTCC | 3 cut(s) | 241, 532, 577 |
| Lsp1109I | GCAGC | 1 cut(s) | 461 |
| LweI | GCATC | 2 cut(s) | 235, 707 |
| MaeI | CTAG | 3 cut(s) | 204, 735, 965 |
| MaeII | ACGT | 1 cut(s) | 807 |
| MaeIII | GTNAC | 4 cut(s) | 634, 713, 833, 947 |
| MalI | GATC | 5 cut(s) | 257, 264, 309, 327, 563 |
| MboI | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| MboII | GAAGA | 2 cut(s) | 431, 854 |
| MflI | RGATCY | 3 cut(s) | 262, 307, 325 |
| MhlI | GDGCHC | 2 cut(s) | 352, 796 |
| MluCI | AATT | 8 cut(s) | 44, 391, 508, 551, 687, 768, 797, 913 |
| MmeI | TCCRAC | 2 cut(s) | 437, 767 |
| MnlI | CCTC | 4 cut(s) | 268, 289, 550, 633 |
| MseI | TTAA | 3 cut(s) | 381, 473, 681 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 1 cut(s) | 24 |
| Mva1269I | GAATGC | 1 cut(s) | 574 |
| MvnI | CGCG | 1 cut(s) | 454 |
| NciI | CCSGG | 1 cut(s) | 24 |
| NdeII | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| NheI | GCTAGC | 1 cut(s) | 203 |
| NlaIII | CATG | 3 cut(s) | 262, 829, 834 |
| NlaIV | GGNNCC | 2 cut(s) | 264, 309 |
| NspI | RCATGY | 1 cut(s) | 834 |
| PciI | ACATGT | 1 cut(s) | 830 |
| PctI | GAATGC | 1 cut(s) | 574 |
| PfeI | GAWTC | 2 cut(s) | 19, 738 |
| PkrI | GCNGC | 1 cut(s) | 451 |
| PpuMI | RGGWCCY | 1 cut(s) | 485 |
| PscI | ACATGT | 1 cut(s) | 830 |
| Psp5II | RGGWCCY | 1 cut(s) | 485 |
| PspFI | CCCAGC | 1 cut(s) | 523 |
| PspN4I | GGNNCC | 2 cut(s) | 264, 309 |
| PspPI | GGNCC | 1 cut(s) | 485 |
| PspPPI | RGGWCCY | 1 cut(s) | 485 |
| PsuI | RGATCY | 3 cut(s) | 262, 307, 325 |
| RsaI | GTAC | 1 cut(s) | 252 |
| RsaNI | GTAC | 1 cut(s) | 251 |
| SaqAI | TTAA | 3 cut(s) | 381, 473, 681 |
| SatI | GCNGC | 1 cut(s) | 450 |
| Sau3AI | GATC | 5 cut(s) | 255, 262, 307, 325, 561 |
| Sau96I | GGNCC | 1 cut(s) | 485 |
| ScrFI | CCNGG | 1 cut(s) | 24 |
| SduI | GDGCHC | 2 cut(s) | 352, 796 |
| SfaNI | GCATC | 2 cut(s) | 235, 707 |
| SfcI | CTRYAG | 1 cut(s) | 612 |
| SinI | GGWCC | 1 cut(s) | 485 |
| SmlI | CTYRAG | 1 cut(s) | 624 |
| SmoI | CTYRAG | 1 cut(s) | 624 |
| Sse9I | AATT | 8 cut(s) | 44, 391, 508, 551, 687, 768, 797, 913 |
| SspMI | CTAG | 3 cut(s) | 204, 735, 965 |
| StyD4I | CCNGG | 1 cut(s) | 22 |
| StyI | CCWWGG | 1 cut(s) | 723 |
| TaaI | ACNGT | 4 cut(s) | 131, 403, 613, 981 |
| TaiI | ACGT | 1 cut(s) | 810 |
| TaqI | TCGA | 1 cut(s) | 287 |
| TasI | AATT | 8 cut(s) | 44, 391, 508, 551, 687, 768, 797, 913 |
| TatI | WGTACW | 1 cut(s) | 250 |
| TfiI | GAWTC | 2 cut(s) | 19, 738 |
| Tru1I | TTAA | 3 cut(s) | 381, 473, 681 |
| Tru9I | TTAA | 3 cut(s) | 381, 473, 681 |
| TscAI | CASTG | 4 cut(s) | 202, 276, 756, 986 |
| TseI | GCWGC | 1 cut(s) | 449 |
| TspDTI | ATGAA | 8 cut(s) | 305, 443, 854, 883, 898, 912, 916, 961 |
| TspRI | CASTG | 4 cut(s) | 202, 276, 756, 986 |
| VneI | GTGCAC | 1 cut(s) | 792 |
| VpaK11BI | GGWCC | 1 cut(s) | 485 |
| XapI | RAATTY | 3 cut(s) | 508, 551, 913 |
| XceI | RCATGY | 1 cut(s) | 834 |
| XmiI | GTMKAC | 1 cut(s) | 810 |
| XspI | CTAG | 3 cut(s) | 204, 735, 965 |