Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000310

Physical Location & Seq

Genomic Coordinates Forward (+)

65429073 .. 65432350

Gene Structure 3278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00331480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGCCTCCGTCCCCTCACCGGCGCCATCGCCTCGCCGGTGTTTCTCTTCCAACACCACCACGTCGTTGCTCCGAGATCCGAACCCCAACTGGTCCAACCTACCTCCAAGGAGTTTATCCTCCTCGATTGGTGCGACTTCGAGCACCCGGTGCTAGCATGGTGAAGCAGCTTCAATTTCAGTTTTCGACTCGATTTTGGAAACTTCAAGCTTGGATGGAAGGCCGCGATGACTGGTGGGGCCGGGCTTACGGTGGCAGCGGCAATGTGGAGGTCAAAAGTGACTCAATTAGTGAAGGGAGTTCAGATTTTGATCCGGAATCGGATGGGTCACCGCCCTTTTACATGCTTGATGCTTACGAAGAGTTCTATGGACCTAATATGGGCACTTGTTTATCTATTTGGGAAGTAAGCTGGTGCAAATTTGAGGTGATCGTGAATGCTCCGAAAGATATAAGGGTCTCAGCTTCCACAAAGAAAACTGTAGATATTCCTCAAGTGGTTGTTACTGCAATAAGTTTGAAAACTATTATCAATGAGAAGCAGAATGTTAACGAAATTGTCCGTGCATCCGTTGTCCGTTGCAACAAGGCCAAGGTAAGACCTAGAATCTATTTTACACTGCCTTGTGTTTTGCTAATTATTGAGTTGTCTTGTTGGAGTGCTGGTATGCTGAGCCACTTTACTGTTGTCCGTAAGCTTGATGGTGGCATATTTCCTATGGGGTTTACTAAAGTGGCTGCAGATAAGAATTCTAAAGCCGGAACAAATGTCTTGAGCATTGAGGGCAGGTGGGCTTTACTCGCATATCTTGTTCTCAATGAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0003896 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006270 GO:0006271 GO:0006272 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009965 GO:0009987 GO:0010016 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0022616 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0032993 GO:0033554 GO:0034061 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097747 GO:0099402 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 DNA_pol_alpha_N zf-DNA_Pol

Protein Analysis

275

Amino Acids

30.79

Weight (kDa)

9.31

Isoelectric Point (pI)

46.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67100 AT5G67100
fragaria_vesca	FvH4_1g20001 FvH4_1g22730 FvH4_1g22730 FvH4_1g22730 FvH4_6g13861 FvH4_6g33603
malus_domestica	MD02G1174100.v1.1 MD02G1174200.v1.1 MD02G1174400.v1.1 MD15G1285400.v1.1
prunus_persica	Prupe.7G131600_v2.0.a1
pyrus_communis	pycom02g14040 pycom02g14050 pycom02g14060 pycom02g14070 pycom15g24830 pycom15g24840
rosa_chinensis	RchiOBHm_Chr2g0109901 RchiOBHm_Chr2g0117021 RchiOBHm_Chr2g0168121 RchiOBHm_Chr4g0394581
rosa_laevigata	RLG00000001621 RLG00000001943 RLG00000003450 RLG00000006116 RLG00000006535 RLG00000008147 RLG00000009121 RLG00000010680 RLG00000013987 RLG00000017585 RLG00000017603 RLG00000017638 RLG00000017923 RLG00000018320 RLG00000021520 RLG00000022613 RLG00000022614 RLG00000023966 RLG00000025998 RLG00000027760 RLG00000033421
rosa_multiflora	Rmu_co7985806.1_g000001 Rmu_co8250293.1_g000001 Rmu_co8353517.1_g000001 Rmu_sc0000697.1_g000011 Rmu_sc0000776.1_g000079 Rmu_sc0001023.1_g000057 Rmu_sc0001266.1_g000019 Rmu_sc0002711.1_g000010 Rmu_sc0002731.1_g000005 Rmu_sc0003002.1_g000047 Rmu_sc0003030.1_g000002 Rmu_sc0003672.1_g000003 Rmu_sc0004168.1_g000062 Rmu_sc0004180.1_g000003 Rmu_sc0009205.1_g000008 Rmu_sc0011259.1_g000001 Rmu_sc0011259.1_g000002 Rmu_sc0027274.1_g000001
rosa_roxburghii	Rroxscaffold_1G00023520 Rroxscaffold_2G00104450 Rroxscaffold_2G00126810 Rroxscaffold_2G00144870 Rroxscaffold_4G00315680 Rroxscaffold_4G00331480 Rroxscaffold_7G00182820
rosa_rugosa	Rorug02G0209600 Rorug04G0130600 Rorug04G0130600 Rorug04G0130700 Rorug05G0230000
rosa_samantha	Rh1AG170000 Rh1CG157700 Rh1CG385600 Rh2AG215100 Rh2AG265500 Rh2BG277300 Rh2CG217600 Rh2CG217700 Rh2DG220600 Rh2DG272800 Rh2DG291800 Rh3AG215700 Rh3BG271700 Rh3DG075200 Rh3DG242600 Rh4AG115400 Rh4AG138100 Rh4AG333600 Rh4BG115100 Rh4BG366300 Rh4CG125400 Rh4CG380400 Rh4DG083500 Rh4DG113200 Rh4DG192900 Rh4DG246300 Rh5AG075000 Rh5BG482300 Rh5CG181200 Rh5CG247200 Rh5CG506900 Rh5DG167600 Rh5DG202900 Rh6AG000500 Rh6AG213400 Rh6BG335800 Rh6CG255700 Rh7AG337500 Rh7BG404500 Rh7BG461500 Rh7CG355600
rosa_wichuraiana	Rw0G019110 Rw2G020950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	777
Acc36I	ACCTGC	1 cut(s)	777
AccB1I	GGYRCC	1 cut(s)	21
AccII	CGCG	1 cut(s)	225
AccIII	TCCGGA	1 cut(s)	313
AciI	CCGC	3 cut(s)	223, 258, 332
AclWI	GGATC	2 cut(s)	70, 305
AcsI	RAATTY	3 cut(s)	419, 748, 822
AcyI	GRCGYC	1 cut(s)	22
AdeI	CACNNNGTG	1 cut(s)	149
AfiI	CCNNNNNNNGG	2 cut(s)	18, 380
AgsI	TTSAA	3 cut(s)	173, 206, 520
AjiI	CACGTC	1 cut(s)	62
AluBI	AGCT	5 cut(s)	169, 209, 411, 464, 697
AluI	AGCT	5 cut(s)	169, 209, 411, 464, 697
Alw21I	GWGCWC	1 cut(s)	145
Alw26I	GTCTC	1 cut(s)	463
AlwI	GGATC	2 cut(s)	70, 305
Aor13HI	TCCGGA	1 cut(s)	313
AoxI	GGCC	3 cut(s)	220, 238, 588
ApeKI	GCWGC	3 cut(s)	166, 255, 737
ApoI	RAATTY	3 cut(s)	419, 748, 822
AspLEI	GCGC	1 cut(s)	24
AspS9I	GGNCC	3 cut(s)	92, 238, 371
AsuC2I	CCSGG	2 cut(s)	147, 242
AsuHPI	GGTGA	4 cut(s)	8, 172, 321, 439
AsuNHI	GCTAGC	1 cut(s)	152
AvaII	GGWCC	2 cut(s)	92, 371
BaeGI	GKGCMC	1 cut(s)	386
BanI	GGYRCC	1 cut(s)	21
Bbv12I	GWGCWC	1 cut(s)	145
BbvI	GCAGC	3 cut(s)	178, 267, 724
BccI	CCATC	4 cut(s)	33, 208, 317, 695
BcnI	CCSGG	2 cut(s)	147, 242
BcoDI	GTCTC	1 cut(s)	463
BfaI	CTAG	2 cut(s)	153, 603
BfmI	CTRYAG	2 cut(s)	480, 738
BfoI	RGCGCY	1 cut(s)	25
BfuAI	ACCTGC	1 cut(s)	777
BisI	GCNGC	5 cut(s)	167, 223, 256, 259, 738
BlpI	GCTNAGC	1 cut(s)	671
BlsI	GCNGC	5 cut(s)	168, 224, 257, 260, 739
Bme1390I	CCNGG	2 cut(s)	147, 242
Bme18I	GGWCC	2 cut(s)	92, 371
BmgBI	CACGTC	1 cut(s)	62
BmgT120I	GGNCC	3 cut(s)	92, 238, 371
BmiI	GGNNCC	2 cut(s)	23, 239
BmrFI	CCNGG	2 cut(s)	147, 242
BmsI	GCATC	2 cut(s)	340, 575
BmtI	GCTAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	1 cut(s)	671
BpuEI	CTTGAG	2 cut(s)	477, 793
BpuMI	CCSGG	2 cut(s)	147, 242
BsaBI	GATNNNNATC	1 cut(s)	309
BsaHI	GRCGYC	1 cut(s)	22
BsaI	GGTCTC	1 cut(s)	463
BsaJI	CCNNGG	2 cut(s)	106, 591
BsaWI	WCCGGW	1 cut(s)	313
BsaXI	ACNNNNNCTCC	2 cut(s)	649, 679
Bsc4I	CCNNNNNNNGG	2 cut(s)	18, 380
Bse118I	RCCGGY	2 cut(s)	18, 35
Bse1I	ACTGG	2 cut(s)	94, 236
Bse3DI	GCAATG	1 cut(s)	268
Bse8I	GATNNNNATC	1 cut(s)	309
BseAI	TCCGGA	1 cut(s)	313
BseDI	CCNNGG	2 cut(s)	106, 591
BseGI	GGATG	3 cut(s)	219, 328, 566
BseJI	GATNNNNATC	1 cut(s)	309
BseLI	CCNNNNNNNGG	2 cut(s)	18, 380
BseMI	GCAATG	1 cut(s)	268
BseMII	CTCAG	2 cut(s)	474, 662
BseNI	ACTGG	2 cut(s)	94, 236
BseRI	GAGGAG	1 cut(s)	111
BseSI	GKGCMC	1 cut(s)	386
BseXI	GCAGC	3 cut(s)	178, 267, 724
Bsh1236I	CGCG	1 cut(s)	225
BshFI	GGCC	3 cut(s)	222, 240, 590
BshNI	GGYRCC	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	145
BsiSI	CCGG	6 cut(s)	19, 36, 147, 241, 314, 759
BslI	CCNNNNNNNGG	2 cut(s)	18, 380
BsmAI	GTCTC	1 cut(s)	463
BsmI	GAATGC	1 cut(s)	442
BsnI	GGCC	3 cut(s)	222, 240, 590
Bso31I	GGTCTC	1 cut(s)	463
Bsp1286I	GDGCHC	2 cut(s)	145, 386
Bsp13I	TCCGGA	1 cut(s)	313
Bsp143I	GATC	3 cut(s)	75, 310, 429
Bsp1720I	GCTNAGC	1 cut(s)	671
BspACI	CCGC	3 cut(s)	223, 258, 332
BspANI	GGCC	3 cut(s)	222, 240, 590
BspCNI	CTCAG	2 cut(s)	473, 663
BspEI	TCCGGA	1 cut(s)	313
BspFNI	CGCG	1 cut(s)	225
BspLI	GGNNCC	2 cut(s)	23, 239
BspMAI	CTGCAG	1 cut(s)	742
BspMI	ACCTGC	1 cut(s)	777
BspOI	GCTAGC	1 cut(s)	156
BspPI	GGATC	2 cut(s)	70, 305
BspT107I	GGYRCC	1 cut(s)	21
BspTNI	GGTCTC	1 cut(s)	463
BsrDI	GCAATG	1 cut(s)	268
BsrFI	RCCGGY	2 cut(s)	18, 35
BsrI	ACTGG	2 cut(s)	94, 236
BssAI	RCCGGY	2 cut(s)	18, 35
BssECI	CCNNGG	2 cut(s)	106, 591
BssMI	GATC	3 cut(s)	75, 310, 429
BssNI	GRCGYC	1 cut(s)	22
BssT1I	CCWWGG	2 cut(s)	106, 591
Bst4CI	ACNGT	3 cut(s)	251, 481, 685
Bst6I	CTCTTC	2 cut(s)	51, 354
BstACI	GRCGYC	1 cut(s)	22
BstAPI	GCANNNNNTGC	1 cut(s)	149
BstC8I	GCNNGC	1 cut(s)	154
BstDEI	CTNAG	2 cut(s)	460, 671
BstEII	GGTNACC	1 cut(s)	327
BstF5I	GGATG	3 cut(s)	219, 328, 566
BstFNI	CGCG	1 cut(s)	225
BstH2I	RGCGCY	1 cut(s)	25
BstHHI	GCGC	1 cut(s)	24
BstKTI	GATC	3 cut(s)	78, 313, 432
BstMAI	GTCTC	1 cut(s)	463
BstMBI	GATC	3 cut(s)	75, 310, 429
BstMWI	GCNNNNNNNGC	3 cut(s)	149, 783, 800
BstNSI	RCATGY	1 cut(s)	346
BstPI	GGTNACC	1 cut(s)	327
BstSCI	CCNGG	2 cut(s)	145, 240
BstSFI	CTRYAG	2 cut(s)	480, 738
BstSLI	GKGCMC	1 cut(s)	386
BstUI	CGCG	1 cut(s)	225
BstV1I	GCAGC	3 cut(s)	178, 267, 724
BstX2I	RGATCY	1 cut(s)	75
BstYI	RGATCY	1 cut(s)	75
BsuRI	GGCC	3 cut(s)	222, 240, 590
BtgZI	GCGATG	2 cut(s)	11, 240
BtrI	CACGTC	1 cut(s)	62
BtsCI	GGATG	3 cut(s)	219, 328, 566
BtsI	GCAGTG	1 cut(s)	617
BtsIMutI	CAGTG	1 cut(s)	617
BveI	ACCTGC	1 cut(s)	777
Cac8I	GCNNGC	1 cut(s)	154
CfoI	GCGC	1 cut(s)	24
Cfr10I	RCCGGY	2 cut(s)	18, 35
Cfr13I	GGNCC	3 cut(s)	92, 238, 371
CviAII	CATG	2 cut(s)	157, 343
DdeI	CTNAG	2 cut(s)	460, 671
DinI	GGCGCC	1 cut(s)	23
DpnI	GATC	3 cut(s)	77, 312, 431
DpnII	GATC	3 cut(s)	75, 310, 429
DraIII	CACNNNGTG	1 cut(s)	149
Eam1104I	CTCTTC	2 cut(s)	51, 354
EarI	CTCTTC	2 cut(s)	51, 354
Eco130I	CCWWGG	2 cut(s)	106, 591
Eco31I	GGTCTC	1 cut(s)	463
Eco47I	GGWCC	2 cut(s)	92, 371
Eco91I	GGTNACC	1 cut(s)	327
EcoO65I	GGTNACC	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	748
EcoT14I	CCWWGG	2 cut(s)	106, 591
EgeI	GGCGCC	1 cut(s)	23
EheI	GGCGCC	1 cut(s)	23
ErhI	CCWWGG	2 cut(s)	106, 591
FaeI	CATG	2 cut(s)	160, 346
FaiI	YATR	9 cut(s)	158, 344, 369, 380, 452, 668, 710, 719, 805
FatI	CATG	2 cut(s)	156, 342
Fnu4HI	GCNGC	5 cut(s)	167, 223, 256, 259, 738
FokI	GGATG	3 cut(s)	226, 335, 553
Fsp4HI	GCNGC	5 cut(s)	167, 223, 256, 259, 738
FspBI	CTAG	2 cut(s)	153, 603
GlaI	GCGC	1 cut(s)	23
GluI	GCNGC	5 cut(s)	167, 223, 256, 259, 738
HaeII	RGCGCY	1 cut(s)	25
HaeIII	GGCC	3 cut(s)	222, 240, 590
HapII	CCGG	6 cut(s)	19, 36, 147, 241, 314, 759
HhaI	GCGC	1 cut(s)	24
Hin1I	GRCGYC	1 cut(s)	22
Hin1II	CATG	2 cut(s)	160, 346
Hin6I	GCGC	1 cut(s)	22
HinP1I	GCGC	1 cut(s)	22
HincII	GTYRAC	1 cut(s)	550
HindII	GTYRAC	1 cut(s)	550
HindIII	AAGCTT	2 cut(s)	207, 695
HinfI	GANTC	4 cut(s)	187, 281, 317, 606
HpaI	GTTAAC	1 cut(s)	550
HpaII	CCGG	6 cut(s)	19, 36, 147, 241, 314, 759
HphI	GGTGA	4 cut(s)	8, 172, 321, 439
Hpy166II	GTNNAC	2 cut(s)	550, 726
Hpy188I	TCNGA	5 cut(s)	73, 80, 304, 322, 444
Hpy188III	TCNNGA	3 cut(s)	314, 433, 772
Hpy8I	GTNNAC	2 cut(s)	550, 726
Hpy99I	CGWCG	1 cut(s)	66
HpyAV	CCTTC	2 cut(s)	212, 287
HpyCH4III	ACNGT	3 cut(s)	251, 481, 685
HpyCH4IV	ACGT	1 cut(s)	61
HpyCH4V	TGCA	5 cut(s)	417, 509, 566, 582, 740
HpyF10VI	GCNNNNNNNGC	3 cut(s)	149, 783, 800
HpyF3I	CTNAG	2 cut(s)	460, 671
HpySE526I	ACGT	1 cut(s)	61
Hsp92I	GRCGYC	1 cut(s)	22
Hsp92II	CATG	2 cut(s)	160, 346
HspAI	GCGC	1 cut(s)	22
KasI	GGCGCC	1 cut(s)	21
Kpn2I	TCCGGA	1 cut(s)	313
KspAI	GTTAAC	1 cut(s)	550
Kzo9I	GATC	3 cut(s)	75, 310, 429
LmnI	GCTCC	2 cut(s)	74, 445
Lsp1109I	GCAGC	3 cut(s)	178, 267, 724
LweI	GCATC	2 cut(s)	340, 575
MaeI	CTAG	2 cut(s)	153, 603
MaeII	ACGT	1 cut(s)	61
MaeIII	GTNAC	3 cut(s)	278, 327, 502
MalI	GATC	3 cut(s)	77, 312, 431
MboI	GATC	3 cut(s)	75, 310, 429
MboII	GAAGA	2 cut(s)	38, 371
MflI	RGATCY	1 cut(s)	75
MhlI	GDGCHC	2 cut(s)	145, 386
MluCI	AATT	7 cut(s)	173, 285, 419, 555, 636, 748, 822
Mly113I	GGCGCC	1 cut(s)	22
MlyI	GAGTC	2 cut(s)	181, 275
MmeI	TCCRAC	3 cut(s)	74, 119, 635
MroI	TCCGGA	1 cut(s)	313
MseI	TTAA	2 cut(s)	549, 826
MspA1I	CMGCKG	1 cut(s)	258
MspI	CCGG	6 cut(s)	19, 36, 147, 241, 314, 759
MspR9I	CCNGG	2 cut(s)	147, 242
Mva1269I	GAATGC	1 cut(s)	442
MvnI	CGCG	1 cut(s)	225
MwoI	GCNNNNNNNGC	3 cut(s)	149, 783, 800
NarI	GGCGCC	1 cut(s)	22
NciI	CCSGG	2 cut(s)	147, 242
NdeII	GATC	3 cut(s)	75, 310, 429
NheI	GCTAGC	1 cut(s)	152
NlaIII	CATG	2 cut(s)	160, 346
NlaIV	GGNNCC	2 cut(s)	23, 239
NmuCI	GTSAC	2 cut(s)	278, 327
NspI	RCATGY	1 cut(s)	346
PaqCI	CACCTGC	1 cut(s)	777
PcsI	WCGNNNNNNNCGW	1 cut(s)	130
PctI	GAATGC	1 cut(s)	442
PfeI	GAWTC	2 cut(s)	317, 606
PkrI	GCNGC	5 cut(s)	168, 224, 257, 260, 739
PleI	GAGTC	2 cut(s)	181, 275
PluTI	GGCGCC	1 cut(s)	25
PpsI	GAGTC	2 cut(s)	181, 275
PspEI	GGTNACC	1 cut(s)	327
PspN4I	GGNNCC	2 cut(s)	23, 239
PspPI	GGNCC	3 cut(s)	92, 238, 371
PstI	CTGCAG	1 cut(s)	742
PsuI	RGATCY	1 cut(s)	75
SaqAI	TTAA	2 cut(s)	549, 826
SatI	GCNGC	5 cut(s)	167, 223, 256, 259, 738
Sau3AI	GATC	3 cut(s)	75, 310, 429
Sau96I	GGNCC	3 cut(s)	92, 238, 371
SchI	GAGTC	2 cut(s)	181, 275
ScrFI	CCNGG	2 cut(s)	147, 242
SduI	GDGCHC	2 cut(s)	145, 386
SfaNI	GCATC	2 cut(s)	340, 575
SfcI	CTRYAG	2 cut(s)	480, 738
SfoI	GGCGCC	1 cut(s)	23
SgrAI	CRCCGGYG	2 cut(s)	18, 35
SinI	GGWCC	2 cut(s)	92, 371
SmlI	CTYRAG	2 cut(s)	492, 772
SmoI	CTYRAG	2 cut(s)	492, 772
Sse9I	AATT	7 cut(s)	173, 285, 419, 555, 636, 748, 822
SsiI	CCGC	3 cut(s)	223, 258, 332
SspDI	GGCGCC	1 cut(s)	21
SspMI	CTAG	2 cut(s)	153, 603
StyD4I	CCNGG	2 cut(s)	145, 240
StyI	CCWWGG	2 cut(s)	106, 591
TaaI	ACNGT	3 cut(s)	251, 481, 685
TaiI	ACGT	1 cut(s)	64
TaqI	TCGA	4 cut(s)	124, 139, 185, 190
TasI	AATT	7 cut(s)	173, 285, 419, 555, 636, 748, 822
TauI	GCSGC	2 cut(s)	225, 261
TfiI	GAWTC	2 cut(s)	317, 606
Tru1I	TTAA	2 cut(s)	549, 826
Tru9I	TTAA	2 cut(s)	549, 826
TscAI	CASTG	1 cut(s)	624
TseFI	GTSAC	2 cut(s)	278, 327
TseI	GCWGC	3 cut(s)	166, 255, 737
Tsp45I	GTSAC	2 cut(s)	278, 327
TspGWI	ACGGA	4 cut(s)	551, 559, 566, 680
TspRI	CASTG	1 cut(s)	624
VpaK11BI	GGWCC	2 cut(s)	92, 371
XapI	RAATTY	3 cut(s)	419, 748, 822
XceI	RCATGY	1 cut(s)	346
XspI	CTAG	2 cut(s)	153, 603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.