DNA polymerase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 28 |
| AccB1I | GGYRCC | 2 cut(s) | 28, 550 |
| AccII | CGCG | 1 cut(s) | 125 |
| AccIII | TCCGGA | 1 cut(s) | 379 |
| AciI | CCGC | 4 cut(s) | 123, 159, 341, 482 |
| AclWI | GGATC | 1 cut(s) | 531 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AgsI | TTSAA | 3 cut(s) | 398, 422, 489 |
| AluBI | AGCT | 4 cut(s) | 145, 418, 472, 539 |
| AluI | AGCT | 4 cut(s) | 145, 418, 472, 539 |
| Alw21I | GWGCWC | 1 cut(s) | 74 |
| AlwI | GGATC | 1 cut(s) | 531 |
| Aor13HI | TCCGGA | 1 cut(s) | 379 |
| AoxI | GGCC | 2 cut(s) | 120, 138 |
| ApeKI | GCWGC | 2 cut(s) | 156, 472 |
| Asp718I | GGTACC | 1 cut(s) | 28 |
| AspS9I | GGNCC | 2 cut(s) | 138, 272 |
| AsuHPI | GGTGA | 1 cut(s) | 441 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BanI | GGYRCC | 2 cut(s) | 28, 550 |
| Bbv12I | GWGCWC | 1 cut(s) | 74 |
| BbvI | GCAGC | 2 cut(s) | 168, 459 |
| BccI | CCATC | 2 cut(s) | 108, 218 |
| BisI | GCNGC | 5 cut(s) | 123, 157, 160, 473, 483 |
| BlsI | GCNGC | 5 cut(s) | 124, 158, 161, 474, 484 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 2 cut(s) | 138, 272 |
| BmiI | GGNNCC | 3 cut(s) | 30, 139, 552 |
| BmsI | GCATC | 3 cut(s) | 241, 418, 469 |
| BpuEI | CTTGAG | 1 cut(s) | 424 |
| BsaBI | GATNNNNATC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 2 cut(s) | 77, 432 |
| BsaWI | WCCGGW | 1 cut(s) | 379 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bse1I | ACTGG | 1 cut(s) | 136 |
| Bse3DI | GCAATG | 1 cut(s) | 169 |
| Bse8I | GATNNNNATC | 1 cut(s) | 210 |
| BseAI | TCCGGA | 1 cut(s) | 379 |
| BseDI | CCNNGG | 2 cut(s) | 77, 432 |
| BseGI | GGATG | 3 cut(s) | 106, 119, 433 |
| BseJI | GATNNNNATC | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseMI | GCAATG | 1 cut(s) | 169 |
| BseMII | CTCAG | 1 cut(s) | 62 |
| BseNI | ACTGG | 1 cut(s) | 136 |
| BseRI | GAGGAG | 1 cut(s) | 94 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseXI | GCAGC | 2 cut(s) | 168, 459 |
| Bsh1236I | CGCG | 1 cut(s) | 125 |
| BshFI | GGCC | 2 cut(s) | 122, 140 |
| BshNI | GGYRCC | 2 cut(s) | 28, 550 |
| BsiHKAI | GWGCWC | 1 cut(s) | 74 |
| BsiSI | CCGG | 1 cut(s) | 380 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BsnI | GGCC | 2 cut(s) | 122, 140 |
| Bsp1286I | GDGCHC | 2 cut(s) | 74, 287 |
| Bsp13I | TCCGGA | 1 cut(s) | 379 |
| Bsp143I | GATC | 2 cut(s) | 211, 523 |
| BspACI | CCGC | 4 cut(s) | 123, 159, 341, 482 |
| BspANI | GGCC | 2 cut(s) | 122, 140 |
| BspCNI | CTCAG | 1 cut(s) | 61 |
| BspEI | TCCGGA | 1 cut(s) | 379 |
| BspFNI | CGCG | 1 cut(s) | 125 |
| BspLI | GGNNCC | 3 cut(s) | 30, 139, 552 |
| BspPI | GGATC | 1 cut(s) | 531 |
| BspT107I | GGYRCC | 2 cut(s) | 28, 550 |
| BsrDI | GCAATG | 1 cut(s) | 169 |
| BsrI | ACTGG | 1 cut(s) | 136 |
| BssECI | CCNNGG | 2 cut(s) | 77, 432 |
| BssMI | GATC | 2 cut(s) | 211, 523 |
| Bst4CI | ACNGT | 2 cut(s) | 289, 386 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstDEI | CTNAG | 1 cut(s) | 48 |
| BstF5I | GGATG | 3 cut(s) | 106, 119, 433 |
| BstFNI | CGCG | 1 cut(s) | 125 |
| BstKTI | GATC | 2 cut(s) | 214, 526 |
| BstMBI | GATC | 2 cut(s) | 211, 523 |
| BstNSI | RCATGY | 2 cut(s) | 247, 358 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BstUI | CGCG | 1 cut(s) | 125 |
| BstV1I | GCAGC | 2 cut(s) | 168, 459 |
| BstX2I | RGATCY | 1 cut(s) | 523 |
| BstYI | RGATCY | 1 cut(s) | 523 |
| BsuRI | GGCC | 2 cut(s) | 122, 140 |
| BtgZI | GCGATG | 1 cut(s) | 140 |
| BtsCI | GGATG | 3 cut(s) | 106, 119, 433 |
| BtsI | GCAGTG | 2 cut(s) | 93, 230 |
| BtsIMutI | CAGTG | 3 cut(s) | 93, 230, 285 |
| Cfr13I | GGNCC | 2 cut(s) | 138, 272 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 4 cut(s) | 244, 355, 476, 547 |
| CviJI | RGCY | 7 cut(s) | 122, 140, 145, 418, 472, 485, 539 |
| CviKI_1 | RGCY | 7 cut(s) | 122, 140, 145, 418, 472, 485, 539 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DdeI | CTNAG | 1 cut(s) | 48 |
| DpnI | GATC | 2 cut(s) | 213, 525 |
| DpnII | GATC | 2 cut(s) | 211, 523 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| FaeI | CATG | 4 cut(s) | 247, 358, 479, 550 |
| FaiI | YATR | 9 cut(s) | 107, 245, 270, 281, 325, 356, 372, 477, 548 |
| FatI | CATG | 4 cut(s) | 243, 354, 475, 546 |
| Fnu4HI | GCNGC | 5 cut(s) | 123, 157, 160, 473, 483 |
| FokI | GGATG | 3 cut(s) | 113, 126, 440 |
| Fsp4HI | GCNGC | 5 cut(s) | 123, 157, 160, 473, 483 |
| GluI | GCNGC | 5 cut(s) | 123, 157, 160, 473, 483 |
| HaeIII | GGCC | 2 cut(s) | 122, 140 |
| HapII | CCGG | 1 cut(s) | 380 |
| Hin1II | CATG | 4 cut(s) | 247, 358, 479, 550 |
| HindIII | AAGCTT | 1 cut(s) | 416 |
| HinfI | GANTC | 5 cut(s) | 43, 55, 182, 218, 437 |
| HpaII | CCGG | 1 cut(s) | 380 |
| HphI | GGTGA | 1 cut(s) | 441 |
| Hpy188I | TCNGA | 5 cut(s) | 51, 78, 205, 223, 330 |
| Hpy188III | TCNNGA | 2 cut(s) | 215, 380 |
| HpyAV | CCTTC | 3 cut(s) | 112, 188, 298 |
| HpyCH4III | ACNGT | 2 cut(s) | 289, 386 |
| HpyCH4V | TGCA | 3 cut(s) | 358, 374, 475 |
| HpyF3I | CTNAG | 1 cut(s) | 48 |
| Hsp92II | CATG | 4 cut(s) | 247, 358, 479, 550 |
| Kpn2I | TCCGGA | 1 cut(s) | 379 |
| KpnI | GGTACC | 1 cut(s) | 32 |
| Kzo9I | GATC | 2 cut(s) | 211, 523 |
| LpnPI | CCDG | 5 cut(s) | 96, 117, 135, 200, 393 |
| Lsp1109I | GCAGC | 2 cut(s) | 168, 459 |
| LweI | GCATC | 3 cut(s) | 241, 418, 469 |
| MaeIII | GTNAC | 2 cut(s) | 179, 228 |
| MalI | GATC | 2 cut(s) | 213, 525 |
| MboI | GATC | 2 cut(s) | 211, 523 |
| MboII | GAAGA | 2 cut(s) | 16, 272 |
| MflI | RGATCY | 1 cut(s) | 523 |
| MhlI | GDGCHC | 2 cut(s) | 74, 287 |
| MluCI | AATT | 5 cut(s) | 186, 375, 399, 491, 503 |
| MlyI | GAGTC | 3 cut(s) | 52, 176, 431 |
| MmeI | TCCRAC | 1 cut(s) | 501 |
| MnlI | CCTC | 4 cut(s) | 57, 72, 163, 427 |
| MroI | TCCGGA | 1 cut(s) | 379 |
| MseI | TTAA | 2 cut(s) | 309, 494 |
| MspA1I | CMGCKG | 1 cut(s) | 159 |
| MspI | CCGG | 1 cut(s) | 380 |
| MvnI | CGCG | 1 cut(s) | 125 |
| NdeII | GATC | 2 cut(s) | 211, 523 |
| NlaIII | CATG | 4 cut(s) | 247, 358, 479, 550 |
| NlaIV | GGNNCC | 3 cut(s) | 30, 139, 552 |
| NmeAIII | GCCGAG | 2 cut(s) | 166, 457 |
| NmuCI | GTSAC | 2 cut(s) | 179, 228 |
| NspI | RCATGY | 2 cut(s) | 247, 358 |
| PfeI | GAWTC | 2 cut(s) | 55, 218 |
| PkrI | GCNGC | 5 cut(s) | 124, 158, 161, 474, 484 |
| PleI | GAGTC | 3 cut(s) | 51, 176, 431 |
| PpsI | GAGTC | 3 cut(s) | 51, 176, 431 |
| PspN4I | GGNNCC | 3 cut(s) | 30, 139, 552 |
| PspPI | GGNCC | 2 cut(s) | 138, 272 |
| PsuI | RGATCY | 1 cut(s) | 523 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SaqAI | TTAA | 2 cut(s) | 309, 494 |
| SatI | GCNGC | 5 cut(s) | 123, 157, 160, 473, 483 |
| Sau3AI | GATC | 2 cut(s) | 211, 523 |
| Sau96I | GGNCC | 2 cut(s) | 138, 272 |
| SchI | GAGTC | 3 cut(s) | 52, 176, 431 |
| SduI | GDGCHC | 2 cut(s) | 74, 287 |
| SetI | ASST | 9 cut(s) | 147, 154, 174, 277, 309, 420, 474, 541, 556 |
| SfaNI | GCATC | 3 cut(s) | 241, 418, 469 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SmlI | CTYRAG | 1 cut(s) | 439 |
| SmoI | CTYRAG | 1 cut(s) | 439 |
| Sse9I | AATT | 5 cut(s) | 186, 375, 399, 491, 503 |
| SsiI | CCGC | 4 cut(s) | 123, 159, 341, 482 |
| TaaI | ACNGT | 2 cut(s) | 289, 386 |
| TasI | AATT | 5 cut(s) | 186, 375, 399, 491, 503 |
| TauI | GCSGC | 3 cut(s) | 125, 162, 485 |
| TfiI | GAWTC | 2 cut(s) | 55, 218 |
| Tru1I | TTAA | 2 cut(s) | 309, 494 |
| Tru9I | TTAA | 2 cut(s) | 309, 494 |
| TscAI | CASTG | 3 cut(s) | 93, 237, 292 |
| TseFI | GTSAC | 2 cut(s) | 179, 228 |
| TseI | GCWGC | 2 cut(s) | 156, 472 |
| Tsp45I | GTSAC | 2 cut(s) | 179, 228 |
| TspDTI | ATGAA | 5 cut(s) | 17, 68, 312, 428, 516 |
| TspRI | CASTG | 3 cut(s) | 93, 237, 292 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XceI | RCATGY | 2 cut(s) | 247, 358 |