Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002711.1

Orthogroup ID

OG0000310

Physical Location & Seq

Genomic Coordinates Reverse (-)

63170 .. 66559

Gene Structure 3390 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002711.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

atgcaagttgaagatgattatagtgatgttgatgtacaagaaagtgagtttggttatgaaagtttccatgcaagtggggtgagagactacacttcggcggaatgggtacaatattggaaatctaagcttccaaatgaaggcgagatacttgaagatgattccgaagaggaggatgacttgtctagtgaggaggatacagagtttgaagtcatacaccataatcccttgttcatcgaggaggatgcggagcttgaagtcatacaccataatcccttattcattgaggtagatattcccatggaggaagagagtccttcaatactttgtgatgatgaagaaattgaagagccaaggactttctcgcctcccaaatccatggagatccatcatgagcttcccaaggtggagagtagaacattgagcacttatgtttttaatgagaggattgggatcaagagaggcgctggaaccgaggtgtcggcgcggtccagcgccttggagcccctccgagctctccagcaaggcggccaccgctctgaaaacgccgacgaccgaatccagatcaagatggagaagccggtctacgacacggtcgacgaggacgagtacgacgccatcatcaacaagcagagcaaggagttcggggacttcatcgaggacgacgacggcctagggtaccgcgacgacagcgagaaagaggactggacctgccacgggcttccgacgtcgtcggatgaatcgaatggcgatatgaggcccaagaggaggaagacggtggagaagaaggagaaggagaaggagaaggagccgaggcccaaaaagcccaattcgtcgcttacggcggcggcagcgatgatggggaagcagaggctttcgtcgatgtttacgtcgccggtgtttaataaaagtatggatggtgacaaggccaaaggattgtcttgtgatagcattgtggatgatgtgattgccgagtttgtgctggacgaggctgatagagagagatggaggagggcacaaccggcgaggagtttcgttccgattatcggagttaagagtgagagagtgagagaggcggtgcatgtcgatggtgaggcttgggcttgggtcggatttgggtgctggatcgattggaggtggcggcgtgatgaaatggtggccggagatggtgttctccggtggttgatgagggaagaagaagatgagaggtcgagggagagagagagaccgtgcggccaggagagagggagggagggagagagagagtatacaaaaaaaagggagaaaaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0003896 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006270 GO:0006271 GO:0006272 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009965 GO:0009987 GO:0010016 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0022616 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0032993 GO:0033554 GO:0034061 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097747 GO:0099402 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 DNA_pol_alpha_N zf-DNA_Pol

Protein Analysis

429

Amino Acids

49.73

Weight (kDa)

4.65

Isoelectric Point (pI)

64.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67100 AT5G67100
fragaria_vesca	FvH4_1g20001 FvH4_1g22730 FvH4_1g22730 FvH4_1g22730 FvH4_6g13861 FvH4_6g33603
malus_domestica	MD02G1174100.v1.1 MD02G1174200.v1.1 MD02G1174400.v1.1 MD15G1285400.v1.1
prunus_persica	Prupe.7G131600_v2.0.a1
pyrus_communis	pycom02g14040 pycom02g14050 pycom02g14060 pycom02g14070 pycom15g24830 pycom15g24840
rosa_chinensis	RchiOBHm_Chr2g0109901 RchiOBHm_Chr2g0117021 RchiOBHm_Chr2g0168121 RchiOBHm_Chr4g0394581
rosa_laevigata	RLG00000001621 RLG00000001943 RLG00000003450 RLG00000006116 RLG00000006535 RLG00000008147 RLG00000009121 RLG00000010680 RLG00000013987 RLG00000017585 RLG00000017603 RLG00000017638 RLG00000017923 RLG00000018320 RLG00000021520 RLG00000022613 RLG00000022614 RLG00000023966 RLG00000025998 RLG00000027760 RLG00000033421
rosa_multiflora	Rmu_co7985806.1_g000001 Rmu_co8250293.1_g000001 Rmu_co8353517.1_g000001 Rmu_sc0000697.1_g000011 Rmu_sc0000776.1_g000079 Rmu_sc0001023.1_g000057 Rmu_sc0001266.1_g000019 Rmu_sc0002711.1_g000010 Rmu_sc0002731.1_g000005 Rmu_sc0003002.1_g000047 Rmu_sc0003030.1_g000002 Rmu_sc0003672.1_g000003 Rmu_sc0004168.1_g000062 Rmu_sc0004180.1_g000003 Rmu_sc0009205.1_g000008 Rmu_sc0011259.1_g000001 Rmu_sc0011259.1_g000002 Rmu_sc0027274.1_g000001
rosa_roxburghii	Rroxscaffold_1G00023520 Rroxscaffold_2G00104450 Rroxscaffold_2G00126810 Rroxscaffold_2G00144870 Rroxscaffold_4G00315680 Rroxscaffold_4G00331480 Rroxscaffold_7G00182820
rosa_rugosa	Rorug02G0209600 Rorug04G0130600 Rorug04G0130600 Rorug04G0130700 Rorug05G0230000
rosa_samantha	Rh1AG170000 Rh1CG157700 Rh1CG385600 Rh2AG215100 Rh2AG265500 Rh2BG277300 Rh2CG217600 Rh2CG217700 Rh2DG220600 Rh2DG272800 Rh2DG291800 Rh3AG215700 Rh3BG271700 Rh3DG075200 Rh3DG242600 Rh4AG115400 Rh4AG138100 Rh4AG333600 Rh4BG115100 Rh4BG366300 Rh4CG125400 Rh4CG380400 Rh4DG083500 Rh4DG113200 Rh4DG192900 Rh4DG246300 Rh5AG075000 Rh5BG482300 Rh5CG181200 Rh5CG247200 Rh5CG506900 Rh5DG167600 Rh5DG202900 Rh6AG000500 Rh6AG213400 Rh6BG335800 Rh6CG255700 Rh7AG337500 Rh7BG404500 Rh7BG461500 Rh7CG355600
rosa_wichuraiana	Rw0G019110 Rw2G020950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	728
Acc36I	ACCTGC	1 cut(s)	716
Acc65I	GGTACC	1 cut(s)	675
AccB1I	GGYRCC	1 cut(s)	675
AccBSI	CCGCTC	1 cut(s)	534
AccI	GTMKAC	3 cut(s)	582, 594, 1265
AccII	CGCG	2 cut(s)	484, 681
AclWI	GGATC	3 cut(s)	376, 458, 1130
AcoI	YGGCCR	3 cut(s)	526, 1155, 1231
AcyI	GRCGYC	2 cut(s)	612, 725
AfaI	GTAC	4 cut(s)	36, 108, 608, 677
AfiI	CCNNNNNNNGG	4 cut(s)	137, 714, 765, 1043
AgsI	TTSAA	6 cut(s)	11, 152, 206, 254, 318, 344
AjnI	CCWGG	1 cut(s)	1233
AjuI	GAANNNNNNNTTGG	2 cut(s)	33, 65
AloI	GAACNNNNNNTCC	2 cut(s)	1152, 1184
AluBI	AGCT	4 cut(s)	127, 250, 394, 512
AluI	AGCT	4 cut(s)	127, 250, 394, 512
Alw21I	GWGCWC	2 cut(s)	425, 514
Alw26I	GTCTC	2 cut(s)	78, 1216
AlwI	GGATC	3 cut(s)	376, 458, 1130
AoxI	GGCC	7 cut(s)	526, 667, 755, 812, 924, 1155, 1231
ApeKI	GCWGC	1 cut(s)	848
Asp718I	GGTACC	1 cut(s)	675
AspA2I	CCTAGG	1 cut(s)	670
AspLEI	GCGC	3 cut(s)	464, 484, 494
AspS9I	GGNCC	4 cut(s)	486, 705, 756, 813
AsuHPI	GGTGA	3 cut(s)	91, 929, 1100
AvaII	GGWCC	2 cut(s)	486, 705
AvrII	CCTAGG	1 cut(s)	670
BaeGI	GKGCMC	1 cut(s)	1015
BanI	GGYRCC	1 cut(s)	675
BanII	GRGCYC	2 cut(s)	504, 514
BarI	GAAGNNNNNNTAC	4 cut(s)	129, 161, 566, 598
BbsI	GAAGAC	1 cut(s)	776
Bbv12I	GWGCWC	2 cut(s)	425, 514
BbvI	GCAGC	1 cut(s)	860
BccI	CCATC	8 cut(s)	393, 562, 623, 850, 908, 996, 1079, 1157
BceAI	ACGGC	2 cut(s)	682, 855
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 622, 656
BciT130I	CCWGG	1 cut(s)	1235
BciVI	GTATCC	1 cut(s)	187
BcoDI	GTCTC	2 cut(s)	78, 1216
BfaI	CTAG	2 cut(s)	183, 671
BfoI	RGCGCY	2 cut(s)	465, 495
BfuAI	ACCTGC	1 cut(s)	716
BfuI	GTATCC	1 cut(s)	187
BisI	GCNGC	6 cut(s)	526, 843, 846, 849, 1139, 1231
BlnI	CCTAGG	1 cut(s)	670
BlsI	GCNGC	6 cut(s)	527, 844, 847, 850, 1140, 1232
Bme1390I	CCNGG	1 cut(s)	1235
Bme18I	GGWCC	2 cut(s)	486, 705
BmgT120I	GGNCC	4 cut(s)	486, 705, 756, 813
BmiI	GGNNCC	4 cut(s)	469, 501, 677, 807
BmrFI	CCNGG	1 cut(s)	1235
BmsI	GCATC	1 cut(s)	232
BpiI	GAAGAC	1 cut(s)	776
BpmI	CTGGAG	1 cut(s)	500
Bsa29I	ATCGAT	1 cut(s)	1125
BsaBI	GATNNNNATC	1 cut(s)	449
BsaHI	GRCGYC	2 cut(s)	612, 725
BsaI	GGTCTC	1 cut(s)	1216
BsaJI	CCNNGG	9 cut(s)	297, 350, 375, 399, 471, 495, 670, 712, 809
BsaWI	WCCGGW	1 cut(s)	1173
BsaXI	ACNNNNNCTCC	2 cut(s)	1152, 1182
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 714, 765, 1043
Bse118I	RCCGGY	3 cut(s)	577, 892, 1018
Bse1I	ACTGG	1 cut(s)	707
Bse8I	GATNNNNATC	1 cut(s)	449
BseBI	CCWGG	1 cut(s)	1235
BseCI	ATCGAT	1 cut(s)	1125
BseDI	CCNNGG	9 cut(s)	297, 350, 375, 399, 471, 495, 670, 712, 809
BseGI	GGATG	5 cut(s)	178, 247, 739, 919, 961
BseJI	GATNNNNATC	1 cut(s)	449
BseLI	CCNNNNNNNGG	4 cut(s)	137, 714, 765, 1043
BseNI	ACTGG	1 cut(s)	707
BseRI	GAGGAG	6 cut(s)	182, 203, 251, 778, 1021, 1039
BseSI	GKGCMC	1 cut(s)	1015
BseXI	GCAGC	1 cut(s)	860
Bsh1236I	CGCG	2 cut(s)	484, 681
Bsh1285I	CGRYCG	2 cut(s)	553, 594
BshFI	GGCC	7 cut(s)	528, 669, 757, 814, 926, 1157, 1233
BshNI	GGYRCC	1 cut(s)	675
BshVI	ATCGAT	1 cut(s)	1125
BsiEI	CGRYCG	2 cut(s)	553, 594
BsiHKAI	GWGCWC	2 cut(s)	425, 514
BsiSI	CCGG	5 cut(s)	578, 893, 1019, 1158, 1174
BslFI	GGGAC	1 cut(s)	659
BslI	CCNNNNNNNGG	4 cut(s)	137, 714, 765, 1043
BsmAI	GTCTC	2 cut(s)	78, 1216
BsmFI	GGGAC	1 cut(s)	659
BsnI	GGCC	7 cut(s)	528, 669, 757, 814, 926, 1157, 1233
Bso31I	GGTCTC	1 cut(s)	1216
Bsp1286I	GDGCHC	4 cut(s)	425, 504, 514, 1015
Bsp1407I	TGTACA	1 cut(s)	34
Bsp143I	GATC	4 cut(s)	381, 450, 561, 1122
Bsp19I	CCATGG	2 cut(s)	297, 375
BspANI	GGCC	7 cut(s)	528, 669, 757, 814, 926, 1157, 1233
BspDI	ATCGAT	1 cut(s)	1125
BspFNI	CGCG	2 cut(s)	484, 681
BspHI	TCATGA	1 cut(s)	388
BspLI	GGNNCC	4 cut(s)	469, 501, 677, 807
BspMI	ACCTGC	1 cut(s)	716
BspPI	GGATC	3 cut(s)	376, 458, 1130
BspQI	GCTCTTC	1 cut(s)	339
BspT107I	GGYRCC	1 cut(s)	675
BspTNI	GGTCTC	1 cut(s)	1216
BsrBI	CCGCTC	1 cut(s)	534
BsrFI	RCCGGY	3 cut(s)	577, 892, 1018
BsrGI	TGTACA	1 cut(s)	34
BsrI	ACTGG	1 cut(s)	707
BssAI	RCCGGY	3 cut(s)	577, 892, 1018
BssECI	CCNNGG	9 cut(s)	297, 350, 375, 399, 471, 495, 670, 712, 809
BssMI	GATC	4 cut(s)	381, 450, 561, 1122
BssNAI	GTATAC	1 cut(s)	1266
BssNI	GRCGYC	2 cut(s)	612, 725
BssT1I	CCWWGG	6 cut(s)	297, 350, 375, 399, 495, 670
Bst1107I	GTATAC	1 cut(s)	1266
Bst2UI	CCWGG	1 cut(s)	1235
Bst4CI	ACNGT	3 cut(s)	592, 775, 1227
Bst6I	CTCTTC	3 cut(s)	159, 300, 339
BstACI	GRCGYC	2 cut(s)	612, 725
BstAUI	TGTACA	1 cut(s)	34
BstDEI	CTNAG	1 cut(s)	123
BstDSI	CCRYGG	3 cut(s)	297, 375, 712
BstF5I	GGATG	5 cut(s)	178, 247, 739, 919, 961
BstFNI	CGCG	2 cut(s)	484, 681
BstH2I	RGCGCY	2 cut(s)	465, 495
BstHHI	GCGC	3 cut(s)	464, 484, 494
BstKTI	GATC	4 cut(s)	384, 453, 564, 1125
BstMAI	GTCTC	2 cut(s)	78, 1216
BstMBI	GATC	4 cut(s)	381, 450, 561, 1122
BstMCI	CGRYCG	2 cut(s)	553, 594
BstMWI	GCNNNNNNNGC	5 cut(s)	531, 687, 820, 848, 1019
BstNI	CCWGG	1 cut(s)	1235
BstNSI	RCATGY	1 cut(s)	1082
BstSCI	CCNGG	1 cut(s)	1233
BstSLI	GKGCMC	1 cut(s)	1015
BstUI	CGCG	2 cut(s)	484, 681
BstV1I	GCAGC	1 cut(s)	860
BstV2I	GAAGAC	1 cut(s)	776
BstX2I	RGATCY	1 cut(s)	381
BstXI	CCANNNNNNTGG	3 cut(s)	74, 376, 496
BstYI	RGATCY	1 cut(s)	381
BstZ17I	GTATAC	1 cut(s)	1266
Bsu15I	ATCGAT	1 cut(s)	1125
BsuI	GTATCC	1 cut(s)	187
BsuRI	GGCC	7 cut(s)	528, 669, 757, 814, 926, 1157, 1233
BsuTUI	ATCGAT	1 cut(s)	1125
BtgI	CCRYGG	3 cut(s)	297, 375, 712
BtgZI	GCGATG	1 cut(s)	866
BtsCI	GGATG	5 cut(s)	178, 247, 739, 919, 961
BveI	ACCTGC	1 cut(s)	716
CciI	TCATGA	1 cut(s)	388
CfoI	GCGC	3 cut(s)	464, 484, 494
Cfr10I	RCCGGY	3 cut(s)	577, 892, 1018
Cfr13I	GGNCC	4 cut(s)	486, 705, 756, 813
ClaI	ATCGAT	1 cut(s)	1125
CseI	GACGC	1 cut(s)	620
Csp6I	GTAC	4 cut(s)	35, 107, 607, 676
CviAII	CATG	5 cut(s)	68, 298, 376, 389, 1079
CviQI	GTAC	4 cut(s)	35, 107, 607, 676
DdeI	CTNAG	1 cut(s)	123
DpnI	GATC	4 cut(s)	383, 452, 563, 1124
DpnII	GATC	4 cut(s)	381, 450, 561, 1122
EaeI	YGGCCR	3 cut(s)	526, 1155, 1231
Eam1104I	CTCTTC	3 cut(s)	159, 300, 339
EarI	CTCTTC	3 cut(s)	159, 300, 339
EciI	GGCGGA	1 cut(s)	113
Ecl136II	GAGCTC	1 cut(s)	512
Eco130I	CCWWGG	6 cut(s)	297, 350, 375, 399, 495, 670
Eco24I	GRGCYC	2 cut(s)	504, 514
Eco31I	GGTCTC	1 cut(s)	1216
Eco47I	GGWCC	2 cut(s)	486, 705
Eco53kI	GAGCTC	1 cut(s)	512
EcoICRI	GAGCTC	1 cut(s)	512
EcoRII	CCWGG	1 cut(s)	1233
EcoT14I	CCWWGG	6 cut(s)	297, 350, 375, 399, 495, 670
EcoT38I	GRGCYC	2 cut(s)	504, 514
ErhI	CCWWGG	6 cut(s)	297, 350, 375, 399, 495, 670
FaeI	CATG	5 cut(s)	71, 301, 379, 392, 1082
FaqI	GGGAC	1 cut(s)	659
FatI	CATG	5 cut(s)	67, 297, 375, 388, 1078
FblI	GTMKAC	3 cut(s)	582, 594, 1265
Fnu4HI	GCNGC	6 cut(s)	526, 843, 846, 849, 1139, 1231
FokI	GGATG	5 cut(s)	185, 254, 746, 926, 968
FriOI	GRGCYC	2 cut(s)	504, 514
Fsp4HI	GCNGC	6 cut(s)	526, 843, 846, 849, 1139, 1231
FspBI	CTAG	2 cut(s)	183, 671
GlaI	GCGC	3 cut(s)	463, 483, 493
GluI	GCNGC	6 cut(s)	526, 843, 846, 849, 1139, 1231
GsuI	CTGGAG	1 cut(s)	500
HaeII	RGCGCY	2 cut(s)	465, 495
HaeIII	GGCC	7 cut(s)	528, 669, 757, 814, 926, 1157, 1233
HapII	CCGG	5 cut(s)	578, 893, 1019, 1158, 1174
HgaI	GACGC	1 cut(s)	620
HhaI	GCGC	3 cut(s)	464, 484, 494
Hin1I	GRCGYC	2 cut(s)	612, 725
Hin1II	CATG	5 cut(s)	71, 301, 379, 392, 1082
Hin6I	GCGC	3 cut(s)	462, 482, 492
HinP1I	GCGC	3 cut(s)	462, 482, 492
HincII	GTYRAC	1 cut(s)	595
HindII	GTYRAC	1 cut(s)	595
HindIII	AAGCTT	1 cut(s)	125
HinfI	GANTC	4 cut(s)	158, 310, 555, 737
HpaII	CCGG	5 cut(s)	578, 893, 1019, 1158, 1174
HphI	GGTGA	3 cut(s)	91, 929, 1100
Hpy166II	GTNNAC	4 cut(s)	583, 595, 885, 1266
Hpy188I	TCNGA	8 cut(s)	163, 509, 538, 723, 733, 1038, 1046, 1109
Hpy188III	TCNNGA	4 cut(s)	389, 454, 559, 565
Hpy8I	GTNNAC	4 cut(s)	583, 595, 885, 1266
HpyAV	CCTTC	6 cut(s)	131, 324, 778, 784, 790, 796
HpyCH4III	ACNGT	3 cut(s)	592, 775, 1227
HpyCH4IV	ACGT	2 cut(s)	725, 887
HpyCH4V	TGCA	3 cut(s)	4, 71, 1078
HpyF10VI	GCNNNNNNNGC	5 cut(s)	531, 687, 820, 848, 1019
HpyF3I	CTNAG	1 cut(s)	123
HpySE526I	ACGT	2 cut(s)	725, 887
Hsp92I	GRCGYC	2 cut(s)	612, 725
Hsp92II	CATG	5 cut(s)	71, 301, 379, 392, 1082
HspAI	GCGC	3 cut(s)	462, 482, 492
KpnI	GGTACC	1 cut(s)	679
Kzo9I	GATC	4 cut(s)	381, 450, 561, 1122
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	3 cut(s)	247, 499, 805
Lsp1109I	GCAGC	1 cut(s)	860
LweI	GCATC	1 cut(s)	232
MaeI	CTAG	2 cut(s)	183, 671
MaeII	ACGT	2 cut(s)	725, 887
MaeIII	GTNAC	1 cut(s)	917
MalI	GATC	4 cut(s)	383, 452, 563, 1124
MbiI	CCGCTC	1 cut(s)	534
MboI	GATC	4 cut(s)	381, 450, 561, 1122
MflI	RGATCY	1 cut(s)	381
MhlI	GDGCHC	4 cut(s)	425, 504, 514, 1015
MluCI	AATT	2 cut(s)	339, 826
MlyI	GAGTC	1 cut(s)	319
MmeI	TCCRAC	3 cut(s)	711, 746, 1087
MseI	TTAA	3 cut(s)	435, 900, 1050
MslI	CAYNNNNRTG	2 cut(s)	72, 1083
MspI	CCGG	5 cut(s)	578, 893, 1019, 1158, 1174
MspR9I	CCNGG	1 cut(s)	1235
MvaI	CCWGG	1 cut(s)	1235
MvnI	CGCG	2 cut(s)	484, 681
MwoI	GCNNNNNNNGC	5 cut(s)	531, 687, 820, 848, 1019
NcoI	CCATGG	2 cut(s)	297, 375
NdeII	GATC	4 cut(s)	381, 450, 561, 1122
NlaIII	CATG	5 cut(s)	71, 301, 379, 392, 1082
NlaIV	GGNNCC	4 cut(s)	469, 501, 677, 807
NmeAIII	GCCGAG	2 cut(s)	834, 994
NmuCI	GTSAC	1 cut(s)	917
NspI	RCATGY	1 cut(s)	1082
PagI	TCATGA	1 cut(s)	388
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	5 cut(s)	591, 600, 660, 737, 884
PfeI	GAWTC	3 cut(s)	158, 555, 737
PflFI	GACNNNGTC	2 cut(s)	590, 727
PkrI	GCNGC	6 cut(s)	527, 844, 847, 850, 1140, 1232
PleI	GAGTC	1 cut(s)	318
PpsI	GAGTC	1 cut(s)	318
Psp124BI	GAGCTC	1 cut(s)	514
Psp6I	CCWGG	1 cut(s)	1233
PspGI	CCWGG	1 cut(s)	1233
PspN4I	GGNNCC	4 cut(s)	469, 501, 677, 807
PspPI	GGNCC	4 cut(s)	486, 705, 756, 813
PsuI	RGATCY	1 cut(s)	381
PsyI	GACNNNGTC	2 cut(s)	590, 727
RsaI	GTAC	4 cut(s)	36, 108, 608, 677
RsaNI	GTAC	4 cut(s)	35, 107, 607, 676
RseI	CAYNNNNRTG	2 cut(s)	72, 1083
SacI	GAGCTC	1 cut(s)	514
SalI	GTCGAC	1 cut(s)	593
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	3 cut(s)	435, 900, 1050
SatI	GCNGC	6 cut(s)	526, 843, 846, 849, 1139, 1231
Sau3AI	GATC	4 cut(s)	381, 450, 561, 1122
Sau96I	GGNCC	4 cut(s)	486, 705, 756, 813
SchI	GAGTC	1 cut(s)	319
ScrFI	CCNGG	1 cut(s)	1235
SduI	GDGCHC	4 cut(s)	425, 504, 514, 1015
SfaNI	GCATC	1 cut(s)	232
SgrAI	CRCCGGYG	1 cut(s)	892
SinI	GGWCC	2 cut(s)	486, 705
SmiMI	CAYNNNNRTG	2 cut(s)	72, 1083
Sse9I	AATT	2 cut(s)	339, 826
SspI	AATATT	1 cut(s)	113
SspMI	CTAG	2 cut(s)	183, 671
SstI	GAGCTC	1 cut(s)	514
StyD4I	CCNGG	1 cut(s)	1233
StyI	CCWWGG	6 cut(s)	297, 350, 375, 399, 495, 670
TaaI	ACNGT	3 cut(s)	592, 775, 1227
TaiI	ACGT	2 cut(s)	728, 890
TaqI	TCGA	8 cut(s)	234, 594, 654, 740, 878, 1083, 1125, 1208
TaqII	GACCGA	1 cut(s)	567
TasI	AATT	2 cut(s)	339, 826
TatI	WGTACW	1 cut(s)	34
TauI	GCSGC	5 cut(s)	528, 845, 848, 1141, 1233
TfiI	GAWTC	3 cut(s)	158, 555, 737
Tru1I	TTAA	3 cut(s)	435, 900, 1050
Tru9I	TTAA	3 cut(s)	435, 900, 1050
TseFI	GTSAC	1 cut(s)	917
TseI	GCWGC	1 cut(s)	848
Tsp45I	GTSAC	1 cut(s)	917
TspDTI	ATGAA	8 cut(s)	72, 150, 220, 268, 348, 640, 750, 1161
Tth111I	GACNNNGTC	2 cut(s)	590, 727
VpaK11BI	GGWCC	2 cut(s)	486, 705
XceI	RCATGY	1 cut(s)	1082
XmaJI	CCTAGG	1 cut(s)	670
XmiI	GTMKAC	3 cut(s)	582, 594, 1265
XspI	CTAG	2 cut(s)	183, 671
ZraI	GACGTC	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.