DNA polymerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 27 |
| AccII | CGCG | 1 cut(s) | 164 |
| AciI | CCGC | 4 cut(s) | 128, 159, 164, 381 |
| AcyI | GRCGYC | 1 cut(s) | 45 |
| AfaI | GTAC | 1 cut(s) | 41 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 359 |
| AjiI | CACGTC | 1 cut(s) | 204 |
| AluBI | AGCT | 3 cut(s) | 125, 187, 334 |
| AluI | AGCT | 3 cut(s) | 125, 187, 334 |
| Alw26I | GTCTC | 1 cut(s) | 310 |
| AoxI | GGCC | 3 cut(s) | 84, 129, 240 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| AspLEI | GCGC | 2 cut(s) | 164, 295 |
| AspS9I | GGNCC | 1 cut(s) | 130 |
| AsuHPI | GGTGA | 1 cut(s) | 245 |
| BaeGI | GKGCMC | 1 cut(s) | 331 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 31 |
| BbsI | GAAGAC | 1 cut(s) | 105 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 2 cut(s) | 56, 224 |
| BceAI | ACGGC | 2 cut(s) | 89, 172 |
| BcoDI | GTCTC | 1 cut(s) | 310 |
| BisI | GCNGC | 4 cut(s) | 126, 129, 160, 165 |
| BlsI | GCNGC | 4 cut(s) | 127, 130, 161, 166 |
| BmgBI | CACGTC | 1 cut(s) | 204 |
| BmgT120I | GGNCC | 1 cut(s) | 130 |
| BmsI | GCATC | 1 cut(s) | 186 |
| BpiI | GAAGAC | 1 cut(s) | 105 |
| BsaHI | GRCGYC | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 1 cut(s) | 87 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 359 |
| BseDI | CCNNGG | 1 cut(s) | 87 |
| BseGI | GGATG | 2 cut(s) | 235, 277 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BseRI | GAGGAG | 3 cut(s) | 123, 337, 355 |
| BseSI | GKGCMC | 1 cut(s) | 331 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 164 |
| Bsh1285I | CGRYCG | 1 cut(s) | 27 |
| BshFI | GGCC | 3 cut(s) | 86, 131, 242 |
| BsiEI | CGRYCG | 1 cut(s) | 27 |
| BsiSI | CCGG | 1 cut(s) | 296 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BsmAI | GTCTC | 1 cut(s) | 310 |
| BsmBI | CGTCTC | 1 cut(s) | 310 |
| BsnI | GGCC | 3 cut(s) | 86, 131, 242 |
| Bsp1286I | GDGCHC | 1 cut(s) | 331 |
| Bsp143I | GATC | 1 cut(s) | 12 |
| BspACI | CCGC | 4 cut(s) | 128, 159, 164, 381 |
| BspANI | GGCC | 3 cut(s) | 86, 131, 242 |
| BspFNI | CGCG | 1 cut(s) | 164 |
| BssECI | CCNNGG | 1 cut(s) | 87 |
| BssMI | GATC | 1 cut(s) | 12 |
| BssNI | GRCGYC | 1 cut(s) | 45 |
| BssT1I | CCWWGG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 2 cut(s) | 25, 104 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstACI | GRCGYC | 1 cut(s) | 45 |
| BstC8I | GCNNGC | 1 cut(s) | 336 |
| BstF5I | GGATG | 2 cut(s) | 235, 277 |
| BstFNI | CGCG | 1 cut(s) | 164 |
| BstHHI | GCGC | 2 cut(s) | 164, 295 |
| BstKTI | GATC | 1 cut(s) | 15 |
| BstMAI | GTCTC | 1 cut(s) | 310 |
| BstMBI | GATC | 1 cut(s) | 12 |
| BstMCI | CGRYCG | 1 cut(s) | 27 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 53, 137, 290, 335 |
| BstSLI | GKGCMC | 1 cut(s) | 331 |
| BstUI | CGCG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BstV2I | GAAGAC | 1 cut(s) | 105 |
| BsuRI | GGCC | 3 cut(s) | 86, 131, 242 |
| BtgZI | GCGATG | 2 cut(s) | 37, 182 |
| BtrI | CACGTC | 1 cut(s) | 204 |
| BtsCI | GGATG | 2 cut(s) | 235, 277 |
| Cac8I | GCNNGC | 1 cut(s) | 336 |
| CfoI | GCGC | 2 cut(s) | 164, 295 |
| Cfr13I | GGNCC | 1 cut(s) | 130 |
| CseI | GACGC | 1 cut(s) | 53 |
| Csp6I | GTAC | 1 cut(s) | 40 |
| CviQI | GTAC | 1 cut(s) | 40 |
| DpnI | GATC | 1 cut(s) | 14 |
| DpnII | GATC | 1 cut(s) | 12 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| Eco130I | CCWWGG | 1 cut(s) | 87 |
| EcoT14I | CCWWGG | 1 cut(s) | 87 |
| ErhI | CCWWGG | 1 cut(s) | 87 |
| Esp3I | CGTCTC | 1 cut(s) | 310 |
| FaiI | YATR | 2 cut(s) | 81, 388 |
| FblI | GTMKAC | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 4 cut(s) | 126, 129, 160, 165 |
| FokI | GGATG | 2 cut(s) | 242, 284 |
| Fsp4HI | GCNGC | 4 cut(s) | 126, 129, 160, 165 |
| GlaI | GCGC | 2 cut(s) | 163, 294 |
| GluI | GCNGC | 4 cut(s) | 126, 129, 160, 165 |
| HaeIII | GGCC | 3 cut(s) | 86, 131, 242 |
| HapII | CCGG | 1 cut(s) | 296 |
| HgaI | GACGC | 1 cut(s) | 53 |
| HhaI | GCGC | 2 cut(s) | 164, 295 |
| Hin1I | GRCGYC | 1 cut(s) | 45 |
| Hin6I | GCGC | 2 cut(s) | 162, 293 |
| HinP1I | GCGC | 2 cut(s) | 162, 293 |
| HincII | GTYRAC | 1 cut(s) | 28 |
| HindII | GTYRAC | 1 cut(s) | 28 |
| HindIII | AAGCTT | 1 cut(s) | 185 |
| HpaII | CCGG | 1 cut(s) | 296 |
| HphI | GGTGA | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 2 cut(s) | 354, 362 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| Hpy99I | CGWCG | 6 cut(s) | 32, 47, 152, 196, 208, 211 |
| HpyAV | CCTTC | 2 cut(s) | 107, 113 |
| HpyCH4III | ACNGT | 2 cut(s) | 25, 104 |
| HpyCH4IV | ACGT | 1 cut(s) | 203 |
| HpyCH4V | TGCA | 1 cut(s) | 386 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 53, 137, 290, 335 |
| HpySE526I | ACGT | 1 cut(s) | 203 |
| Hsp92I | GRCGYC | 1 cut(s) | 45 |
| HspAI | GCGC | 2 cut(s) | 162, 293 |
| Kzo9I | GATC | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 122 |
| LpnPI | CCDG | 2 cut(s) | 309, 320 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 1 cut(s) | 186 |
| MaeII | ACGT | 1 cut(s) | 203 |
| MaeIII | GTNAC | 1 cut(s) | 233 |
| MalI | GATC | 1 cut(s) | 14 |
| MboI | GATC | 1 cut(s) | 12 |
| MboII | GAAGA | 2 cut(s) | 104, 110 |
| MhlI | GDGCHC | 1 cut(s) | 331 |
| MluCI | AATT | 1 cut(s) | 143 |
| MseI | TTAA | 2 cut(s) | 216, 366 |
| MspA1I | CMGCKG | 1 cut(s) | 334 |
| MspI | CCGG | 1 cut(s) | 296 |
| MvnI | CGCG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 53, 137, 290, 335 |
| NdeII | GATC | 1 cut(s) | 12 |
| NmeAIII | GCCGAG | 1 cut(s) | 310 |
| NmuCI | GTSAC | 1 cut(s) | 233 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 24, 33, 200 |
| PflFI | GACNNNGTC | 1 cut(s) | 23 |
| PkrI | GCNGC | 4 cut(s) | 127, 130, 161, 166 |
| PspPI | GGNCC | 1 cut(s) | 130 |
| PsyI | GACNNNGTC | 1 cut(s) | 23 |
| PvuII | CAGCTG | 1 cut(s) | 334 |
| RsaI | GTAC | 1 cut(s) | 41 |
| RsaNI | GTAC | 1 cut(s) | 40 |
| SalI | GTCGAC | 1 cut(s) | 26 |
| SaqAI | TTAA | 2 cut(s) | 216, 366 |
| SatI | GCNGC | 4 cut(s) | 126, 129, 160, 165 |
| Sau3AI | GATC | 1 cut(s) | 12 |
| Sau96I | GGNCC | 1 cut(s) | 130 |
| SduI | GDGCHC | 1 cut(s) | 331 |
| SetI | ASST | 4 cut(s) | 127, 189, 206, 336 |
| SfaNI | GCATC | 1 cut(s) | 186 |
| Sse9I | AATT | 1 cut(s) | 143 |
| SsiI | CCGC | 4 cut(s) | 128, 159, 164, 381 |
| StyI | CCWWGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 2 cut(s) | 25, 104 |
| TaiI | ACGT | 1 cut(s) | 206 |
| TaqI | TCGA | 2 cut(s) | 27, 194 |
| TasI | AATT | 1 cut(s) | 143 |
| TauI | GCSGC | 3 cut(s) | 131, 162, 167 |
| Tru1I | TTAA | 2 cut(s) | 216, 366 |
| Tru9I | TTAA | 2 cut(s) | 216, 366 |
| TseFI | GTSAC | 1 cut(s) | 233 |
| TseI | GCWGC | 1 cut(s) | 125 |
| Tsp45I | GTSAC | 1 cut(s) | 233 |
| TspDTI | ATGAA | 1 cut(s) | 337 |
| TspGWI | ACGGA | 1 cut(s) | 334 |
| Tth111I | GACNNNGTC | 1 cut(s) | 23 |
| XmiI | GTMKAC | 1 cut(s) | 27 |