Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000310

Physical Location & Seq

Genomic Coordinates Forward (+)

38113602 .. 38129448

Gene Structure 15847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG213400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAGAGATTCAGGTGGGGAAGTTGGAGTTCCCTATGAGACTTACTTTCCCTATGAGACTTACTTTCCAATGCCAACCCCAGCAAAGGATAAACCATGGTATTCCAGAGAACAAGGAAGCGACCACATCACGATGATTTCAACAGAGCATGACTGGACCAAAAATTCTGAGCAGTATCAATGGATGAAAAGGGACATGGCTTCAGTTGATCGATCTGAAACTCCTTGGTTGATATTTATGGGGCATAGACCAATGTATACATCTGCCCCTGGATTCCTGAGTGTTGATGAGAAATTCGTTGACAAAGTTGAACCATTACTTCTGGCAAGCAAAGTTGATCTGGCGCTGTTTGGTCATGTCCATAACTACGAGCGAACCTGCTCCATTTATAAGAGCCAATGCATGAAATTGCCTTGCAAAGATGAGGCTGGGATCGACACATATGATCACAGCAACTACAGTGCCCCAGTGCCAGCCATAATTGGAATGGCTGGCTTTTCCTTGGACAAGTTTCCCAGTGGTGTTAAAGTAGGAAGTTCATATCAGAGTTGTTGTGCGGTTGTAAAGAACATGCAAAGATGTGTCTATGCAATTCCGGACAGTCCTTTATTTCAAACTGACGAAATGATGAAGCTTGAAAAGGATGCCGAGGACTCAAGGATTTCACCCACAGATTTTCGTAAGAAGCTGCATAATGCGGCTTCAGAATTAAAGAATGAATTAGCAAAGAAGTTGTTGGATCTCAATGTATCAGCTTTTAGCATGGCACCTGTCAAGAGGAACTATGCTTTTGAGCGATCTGACATACCTGCAGGGGAGAATTATGTACTGAAGATCAATTATCCATTCCGGGATCCACCACTATCAGCATATCTAAAAGGAGAAACTTTTTGTGCTCTTCTAGGAACTCATAGCAGCGCGTTGGAACTTTTCCTTGTTAAAAGGAAGATAAAAGGACCTTCTTGGCTATCAGTTTCAAATTTTTCCATCTGCCCAGCTCCACAACGGGTAAGCTGGTGCAAATTTGAGGTGATCGTGAATGCTCCGAAAGATATAAAGGTCTCAGCTTCCACAAAGAAAACTGTAGATATTCCTCAAGTGGTTGTTACTGCAATAAGTTTGAAAACTATTATCAATGAGAAGCAGAATGTTAACGAAATTGTCTCTGCATCTGTTGTCTACTGTAACAAGGCCAAGTGTTCGCAGGGTTCAGATGATGAGAAAGGTGATGAGAGTGGTCATGCAACTGGGAGTCAGAATGAGAACCCCAGTGTCAATCCCAAATCTTCAGGAAACTCGAAAAATGCAAAGTTCTCTCGACATTTAATTATTTGCATTCAGAAGACTGCTTTTAAGGACAACTCACATGTAGGTGCATTTGTCACCGAGATATGCTCACGGATATCAAGTGCAAAAGGGAGGGATGGAAGATTTGAGAATTTGTTTATTAGAAAAGATTCAAGCTCTGCATACTTTAGTCACCTATTTGTGGGCACTGCTGTGTATACCAGGAATCGTTGTTTTCGTTTAGCTCTATCATCAAAGGCAGGGAAGAATTCAGTGCTTCTACCTACTGGGCACTTCAAAACTAAGGACATGATGAGTTATGGTTTCCAACAGCAGTCTGAAGAGGAGATACCCTGCATTTTGATACATAGAGGTCAACCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0003896 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006270 GO:0006271 GO:0006272 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009965 GO:0009987 GO:0010016 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0022616 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0032993 GO:0033554 GO:0034061 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097747 GO:0099402 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 DNA_pol_alpha_N zf-DNA_Pol

Protein Analysis

556

Amino Acids

62.21

Weight (kDa)

8.69

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	41 - 123	4.6e-07	Calcineurin-like phosphoesterase
DNA_pol_B_exo1	PF03104	304 - 397	5.1e-08	DNA polymerase family B, exonuclease domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67100 AT5G67100
fragaria_vesca	FvH4_1g20001 FvH4_1g22730 FvH4_1g22730 FvH4_1g22730 FvH4_6g13861 FvH4_6g33603
malus_domestica	MD02G1174100.v1.1 MD02G1174200.v1.1 MD02G1174400.v1.1 MD15G1285400.v1.1
prunus_persica	Prupe.7G131600_v2.0.a1
pyrus_communis	pycom02g14040 pycom02g14050 pycom02g14060 pycom02g14070 pycom15g24830 pycom15g24840
rosa_chinensis	RchiOBHm_Chr2g0109901 RchiOBHm_Chr2g0117021 RchiOBHm_Chr2g0168121 RchiOBHm_Chr4g0394581
rosa_laevigata	RLG00000001621 RLG00000001943 RLG00000003450 RLG00000006116 RLG00000006535 RLG00000008147 RLG00000009121 RLG00000010680 RLG00000013987 RLG00000017585 RLG00000017603 RLG00000017638 RLG00000017923 RLG00000018320 RLG00000021520 RLG00000022613 RLG00000022614 RLG00000023966 RLG00000025998 RLG00000027760 RLG00000033421
rosa_multiflora	Rmu_co7985806.1_g000001 Rmu_co8250293.1_g000001 Rmu_co8353517.1_g000001 Rmu_sc0000697.1_g000011 Rmu_sc0000776.1_g000079 Rmu_sc0001023.1_g000057 Rmu_sc0001266.1_g000019 Rmu_sc0002711.1_g000010 Rmu_sc0002731.1_g000005 Rmu_sc0003002.1_g000047 Rmu_sc0003030.1_g000002 Rmu_sc0003672.1_g000003 Rmu_sc0004168.1_g000062 Rmu_sc0004180.1_g000003 Rmu_sc0009205.1_g000008 Rmu_sc0011259.1_g000001 Rmu_sc0011259.1_g000002 Rmu_sc0027274.1_g000001
rosa_roxburghii	Rroxscaffold_1G00023520 Rroxscaffold_2G00104450 Rroxscaffold_2G00126810 Rroxscaffold_2G00144870 Rroxscaffold_4G00315680 Rroxscaffold_4G00331480 Rroxscaffold_7G00182820
rosa_rugosa	Rorug02G0209600 Rorug04G0130600 Rorug04G0130600 Rorug04G0130700 Rorug05G0230000
rosa_samantha	Rh1AG170000 Rh1CG157700 Rh1CG385600 Rh2AG215100 Rh2AG265500 Rh2BG277300 Rh2CG217600 Rh2CG217700 Rh2DG220600 Rh2DG272800 Rh2DG291800 Rh3AG215700 Rh3BG271700 Rh3DG075200 Rh3DG242600 Rh4AG115400 Rh4AG138100 Rh4AG333600 Rh4BG115100 Rh4BG366300 Rh4CG125400 Rh4CG380400 Rh4DG083500 Rh4DG113200 Rh4DG192900 Rh4DG246300 Rh5AG075000 Rh5BG482300 Rh5CG181200 Rh5CG247200 Rh5CG506900 Rh5DG167600 Rh5DG202900 Rh6AG000500 Rh6AG213400 Rh6BG335800 Rh6CG255700 Rh7AG337500 Rh7BG404500 Rh7BG461500 Rh7CG355600
rosa_wichuraiana	Rw0G019110 Rw2G020950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	390
Acc36I	ACCTGC	2 cut(s)	386, 817
AccB1I	GGYRCC	1 cut(s)	766
AccI	GTMKAC	3 cut(s)	257, 1179, 1505
AccII	CGCG	1 cut(s)	920
AccIII	TCCGGA	1 cut(s)	595
AciI	CCGC	2 cut(s)	557, 698
AclWI	GGATC	4 cut(s)	440, 747, 848, 861
AcsI	RAATTY	6 cut(s)	163, 293, 979, 1022, 1438, 1555
AcuI	CTGAAG	5 cut(s)	186, 687, 851, 1272, 1647
AfaI	GTAC	1 cut(s)	828
AfiI	CCNNNNNNNGG	2 cut(s)	85, 1489
AflIII	ACRYGT	1 cut(s)	1366
AgsI	TTSAA	8 cut(s)	141, 311, 614, 638, 978, 1123, 1461, 1585
AjnI	CCWGG	2 cut(s)	268, 1508
AleI	CACNNNNGTG	1 cut(s)	1499
AluBI	AGCT	8 cut(s)	634, 688, 755, 998, 1014, 1067, 1464, 1532
AluI	AGCT	8 cut(s)	634, 688, 755, 998, 1014, 1067, 1464, 1532
Alw21I	GWGCWC	1 cut(s)	898
Alw26I	GTCTC	4 cut(s)	32, 50, 1066, 1168
AlwI	GGATC	4 cut(s)	440, 747, 848, 861
Aor13HI	TCCGGA	1 cut(s)	595
AoxI	GGCC	1 cut(s)	1191
ApeKI	GCWGC	2 cut(s)	688, 915
ApoI	RAATTY	6 cut(s)	163, 293, 979, 1022, 1438, 1555
Asp700I	GAANNNNTTC	1 cut(s)	1456
AspLEI	GCGC	2 cut(s)	346, 920
AspS9I	GGNCC	2 cut(s)	156, 956
AsuC2I	CCSGG	1 cut(s)	851
AsuHPI	GGTGA	5 cut(s)	657, 1042, 1238, 1375, 1472
AvaII	GGWCC	2 cut(s)	156, 956
BaeGI	GKGCMC	3 cut(s)	466, 1496, 1581
BamHI	GGATCC	1 cut(s)	853
BanI	GGYRCC	1 cut(s)	766
BarI	GAAGNNNNNNTAC	2 cut(s)	1620, 1652
BbsI	GAAGAC	1 cut(s)	1349
Bbv12I	GWGCWC	1 cut(s)	898
BbvI	GCAGC	2 cut(s)	675, 927
BccI	CCATC	2 cut(s)	995, 1418
BciT130I	CCWGG	2 cut(s)	270, 1510
BclI	TGATCA	1 cut(s)	445
BcnI	CCSGG	1 cut(s)	851
BcoDI	GTCTC	4 cut(s)	32, 50, 1066, 1168
BfaI	CTAG	2 cut(s)	902, 1669
BfmI	CTRYAG	3 cut(s)	457, 810, 1083
BfoI	RGCGCY	1 cut(s)	347
BfuAI	ACCTGC	2 cut(s)	386, 817
BisI	GCNGC	3 cut(s)	689, 699, 916
BlsI	GCNGC	3 cut(s)	690, 700, 917
Bme1390I	CCNGG	3 cut(s)	270, 851, 1510
Bme18I	GGWCC	2 cut(s)	156, 956
BmgT120I	GGNCC	2 cut(s)	156, 956
BmiI	GGNNCC	2 cut(s)	768, 855
BmrFI	CCNGG	3 cut(s)	270, 851, 1510
BmrI	ACTGGG	5 cut(s)	461, 510, 1257, 1263, 1584
BmsI	GCATC	2 cut(s)	634, 1178
BmuI	ACTGGG	5 cut(s)	461, 510, 1257, 1263, 1584
BpiI	GAAGAC	1 cut(s)	1349
BplI	GAGNNNNNCTC	2 cut(s)	1379, 1411
BpuEI	CTTGAG	2 cut(s)	640, 1080
BpuMI	CCSGG	1 cut(s)	851
Bsa29I	ATCGAT	1 cut(s)	211
BsaI	GGTCTC	1 cut(s)	1066
BsaJI	CCNNGG	5 cut(s)	95, 224, 268, 501, 648
BsaWI	WCCGGW	1 cut(s)	595
Bsc4I	CCNNNNNNNGG	2 cut(s)	85, 1489
Bse1I	ACTGG	6 cut(s)	158, 467, 516, 1252, 1269, 1579
BseAI	TCCGGA	1 cut(s)	595
BseBI	CCWGG	2 cut(s)	270, 1510
BseCI	ATCGAT	1 cut(s)	211
BseDI	CCNNGG	5 cut(s)	95, 224, 268, 501, 648
BseGI	GGATG	3 cut(s)	189, 649, 1429
BseLI	CCNNNNNNNGG	2 cut(s)	85, 1489
BseMII	CTCAG	3 cut(s)	159, 269, 1077
BseNI	ACTGG	6 cut(s)	158, 467, 516, 1252, 1269, 1579
BseRI	GAGGAG	1 cut(s)	1646
BseSI	GKGCMC	3 cut(s)	466, 1496, 1581
BseXI	GCAGC	2 cut(s)	675, 927
BseYI	CCCAGC	3 cut(s)	79, 428, 994
Bsh1236I	CGCG	1 cut(s)	920
BshFI	GGCC	1 cut(s)	1193
BshNI	GGYRCC	1 cut(s)	766
BshVI	ATCGAT	1 cut(s)	211
BsiHKAI	GWGCWC	1 cut(s)	898
BsiSI	CCGG	2 cut(s)	596, 850
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	2 cut(s)	85, 1489
BsmAI	GTCTC	4 cut(s)	32, 50, 1066, 1168
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	2 cut(s)	1045, 1335
BsnI	GGCC	1 cut(s)	1193
Bso31I	GGTCTC	1 cut(s)	1066
Bsp1286I	GDGCHC	4 cut(s)	466, 898, 1496, 1581
Bsp13I	TCCGGA	1 cut(s)	595
Bsp19I	CCATGG	1 cut(s)	95
BspACI	CCGC	2 cut(s)	557, 698
BspANI	GGCC	1 cut(s)	1193
BspCNI	CTCAG	3 cut(s)	160, 270, 1076
BspDI	ATCGAT	1 cut(s)	211
BspEI	TCCGGA	1 cut(s)	595
BspFNI	CGCG	1 cut(s)	920
BspLI	GGNNCC	2 cut(s)	768, 855
BspMAI	CTGCAG	1 cut(s)	814
BspMI	ACCTGC	2 cut(s)	386, 817
BspPI	GGATC	4 cut(s)	440, 747, 848, 861
BspQI	GCTCTTC	1 cut(s)	903
BspT107I	GGYRCC	1 cut(s)	766
BspTNI	GGTCTC	1 cut(s)	1066
BsrI	ACTGG	6 cut(s)	158, 467, 516, 1252, 1269, 1579
BssECI	CCNNGG	5 cut(s)	95, 224, 268, 501, 648
BssNAI	GTATAC	2 cut(s)	258, 1506
BssT1I	CCWWGG	3 cut(s)	95, 224, 501
Bst1107I	GTATAC	2 cut(s)	258, 1506
Bst2UI	CCWGG	2 cut(s)	270, 1510
Bst4CI	ACNGT	4 cut(s)	461, 602, 1084, 1184
Bst6I	CTCTTC	2 cut(s)	903, 1623
BstC8I	GCNNGC	3 cut(s)	328, 474, 493
BstDEI	CTNAG	4 cut(s)	168, 278, 1063, 1590
BstDSI	CCRYGG	1 cut(s)	95
BstF5I	GGATG	3 cut(s)	189, 649, 1429
BstFNI	CGCG	1 cut(s)	920
BstH2I	RGCGCY	1 cut(s)	347
BstHHI	GCGC	2 cut(s)	346, 920
BstMAI	GTCTC	4 cut(s)	32, 50, 1066, 1168
BstNI	CCWGG	2 cut(s)	270, 1510
BstNSI	RCATGY	2 cut(s)	574, 1370
BstSCI	CCNGG	3 cut(s)	268, 849, 1508
BstSFI	CTRYAG	3 cut(s)	457, 810, 1083
BstSLI	GKGCMC	3 cut(s)	466, 1496, 1581
BstUI	CGCG	1 cut(s)	920
BstV1I	GCAGC	2 cut(s)	675, 927
BstV2I	GAAGAC	1 cut(s)	1349
BstX2I	RGATCY	2 cut(s)	739, 853
BstYI	RGATCY	2 cut(s)	739, 853
BstZ17I	GTATAC	2 cut(s)	258, 1506
Bsu15I	ATCGAT	1 cut(s)	211
BsuRI	GGCC	1 cut(s)	1193
BsuTUI	ATCGAT	1 cut(s)	211
BtgI	CCRYGG	1 cut(s)	95
BtsCI	GGATG	3 cut(s)	189, 649, 1429
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	6 cut(s)	466, 474, 523, 1276, 1494, 1566
BveI	ACCTGC	2 cut(s)	386, 817
Cac8I	GCNNGC	3 cut(s)	328, 474, 493
CfoI	GCGC	2 cut(s)	346, 920
Cfr13I	GGNCC	2 cut(s)	156, 956
ClaI	ATCGAT	1 cut(s)	211
Csp6I	GTAC	1 cut(s)	827
CviQI	GTAC	1 cut(s)	827
DdeI	CTNAG	4 cut(s)	168, 278, 1063, 1590
Eam1104I	CTCTTC	2 cut(s)	903, 1623
EarI	CTCTTC	2 cut(s)	903, 1623
Eco130I	CCWWGG	3 cut(s)	95, 224, 501
Eco31I	GGTCTC	1 cut(s)	1066
Eco32I	GATATC	1 cut(s)	1404
Eco47I	GGWCC	2 cut(s)	156, 956
Eco57I	CTGAAG	5 cut(s)	186, 687, 851, 1272, 1647
EcoO109I	RGGNCCY	1 cut(s)	956
EcoRI	GAATTC	1 cut(s)	1555
EcoRII	CCWGG	2 cut(s)	268, 1508
EcoRV	GATATC	1 cut(s)	1404
EcoT14I	CCWWGG	3 cut(s)	95, 224, 501
EcoT22I	ATGCAT	1 cut(s)	404
ErhI	CCWWGG	3 cut(s)	95, 224, 501
FaqI	GGGAC	1 cut(s)	206
FauNDI	CATATG	1 cut(s)	442
FbaI	TGATCA	1 cut(s)	445
FblI	GTMKAC	3 cut(s)	257, 1179, 1505
Fnu4HI	GCNGC	3 cut(s)	689, 699, 916
FokI	GGATG	3 cut(s)	196, 656, 1436
Fsp4HI	GCNGC	3 cut(s)	689, 699, 916
FspBI	CTAG	2 cut(s)	902, 1669
GlaI	GCGC	2 cut(s)	345, 919
GluI	GCNGC	3 cut(s)	689, 699, 916
GsaI	CCCAGC	3 cut(s)	83, 432, 998
HaeII	RGCGCY	1 cut(s)	347
HaeIII	GGCC	1 cut(s)	1193
HapII	CCGG	2 cut(s)	596, 850
HhaI	GCGC	2 cut(s)	346, 920
Hin6I	GCGC	2 cut(s)	344, 918
HinP1I	GCGC	2 cut(s)	344, 918
HincII	GTYRAC	3 cut(s)	301, 1153, 1664
HindII	GTYRAC	3 cut(s)	301, 1153, 1664
HindIII	AAGCTT	1 cut(s)	632
HinfI	GANTC	6 cut(s)	8, 273, 653, 1252, 1457, 1513
HpaI	GTTAAC	1 cut(s)	1153
HpaII	CCGG	2 cut(s)	596, 850
HphI	GGTGA	5 cut(s)	657, 1042, 1238, 1375, 1472
Hpy166II	GTNNAC	6 cut(s)	258, 301, 1153, 1180, 1506, 1664
Hpy188III	TCNNGA	8 cut(s)	105, 130, 277, 596, 775, 1036, 1290, 1317
Hpy8I	GTNNAC	6 cut(s)	258, 301, 1153, 1180, 1506, 1664
HpyAV	CCTTC	1 cut(s)	969
HpyCH4III	ACNGT	4 cut(s)	461, 602, 1084, 1184
HpyF3I	CTNAG	4 cut(s)	168, 278, 1063, 1590
HspAI	GCGC	2 cut(s)	344, 918
Kpn2I	TCCGGA	1 cut(s)	595
Ksp22I	TGATCA	1 cut(s)	445
KspAI	GTTAAC	1 cut(s)	1153
LguI	GCTCTTC	1 cut(s)	903
LmnI	GCTCC	3 cut(s)	386, 1003, 1048
Lsp1109I	GCAGC	2 cut(s)	675, 927
LweI	GCATC	2 cut(s)	634, 1178
MaeI	CTAG	2 cut(s)	902, 1669
MaeIII	GTNAC	4 cut(s)	1105, 1184, 1381, 1478
MboII	GAAGA	8 cut(s)	844, 890, 958, 1278, 1354, 1440, 1564, 1640
MflI	RGATCY	2 cut(s)	739, 853
MhlI	GDGCHC	4 cut(s)	466, 898, 1496, 1581
MlyI	GAGTC	2 cut(s)	647, 1261
MmeI	TCCRAC	4 cut(s)	4, 717, 903, 1639
MnlI	CCTC	8 cut(s)	418, 643, 771, 1021, 1104, 1413, 1624, 1652
Mph1103I	ATGCAT	1 cut(s)	404
MroI	TCCGGA	1 cut(s)	595
MroXI	GAANNNNTTC	1 cut(s)	1456
MseI	TTAA	6 cut(s)	525, 710, 939, 1152, 1325, 1353
MslI	CAYNNNNRTG	3 cut(s)	131, 1371, 1499
MspI	CCGG	2 cut(s)	596, 850
MspR9I	CCNGG	3 cut(s)	270, 851, 1510
Mva1269I	GAATGC	2 cut(s)	1045, 1335
MvaI	CCWGG	2 cut(s)	270, 1510
MvnI	CGCG	1 cut(s)	920
NciI	CCSGG	1 cut(s)	851
NcoI	CCATGG	1 cut(s)	95
NdeI	CATATG	1 cut(s)	442
NlaIV	GGNNCC	2 cut(s)	768, 855
NmeAIII	GCCGAG	1 cut(s)	673
NmuCI	GTSAC	2 cut(s)	1381, 1478
NsiI	ATGCAT	1 cut(s)	404
NspI	RCATGY	2 cut(s)	574, 1370
OliI	CACNNNNGTG	1 cut(s)	1499
PciI	ACATGT	1 cut(s)	1366
PciSI	GCTCTTC	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	1 cut(s)	1522
PctI	GAATGC	2 cut(s)	1045, 1335
PdmI	GAANNNNTTC	1 cut(s)	1456
PfeI	GAWTC	4 cut(s)	8, 273, 1457, 1513
PfoI	TCCNGGA	1 cut(s)	849
PkrI	GCNGC	3 cut(s)	690, 700, 917
PleI	GAGTC	2 cut(s)	647, 1260
PpsI	GAGTC	2 cut(s)	647, 1260
PpuMI	RGGWCCY	1 cut(s)	956
PscI	ACATGT	1 cut(s)	1366
PsiI	TTATAA	1 cut(s)	390
Psp5II	RGGWCCY	1 cut(s)	956
Psp6I	CCWGG	2 cut(s)	268, 1508
PspFI	CCCAGC	3 cut(s)	79, 428, 994
PspGI	CCWGG	2 cut(s)	268, 1508
PspN4I	GGNNCC	2 cut(s)	768, 855
PspPI	GGNCC	2 cut(s)	156, 956
PspPPI	RGGWCCY	1 cut(s)	956
PstI	CTGCAG	1 cut(s)	814
PsuI	RGATCY	2 cut(s)	739, 853
RsaI	GTAC	1 cut(s)	828
RsaNI	GTAC	1 cut(s)	827
RseI	CAYNNNNRTG	3 cut(s)	131, 1371, 1499
SapI	GCTCTTC	1 cut(s)	903
SaqAI	TTAA	6 cut(s)	525, 710, 939, 1152, 1325, 1353
SatI	GCNGC	3 cut(s)	689, 699, 916
Sau96I	GGNCC	2 cut(s)	156, 956
SbfI	CCTGCAGG	1 cut(s)	814
SchI	GAGTC	2 cut(s)	647, 1261
ScrFI	CCNGG	3 cut(s)	270, 851, 1510
SdaI	CCTGCAGG	1 cut(s)	814
SduI	GDGCHC	4 cut(s)	466, 898, 1496, 1581
SfaNI	GCATC	2 cut(s)	634, 1178
SfcI	CTRYAG	3 cut(s)	457, 810, 1083
SinI	GGWCC	2 cut(s)	156, 956
SmiMI	CAYNNNNRTG	3 cut(s)	131, 1371, 1499
SmlI	CTYRAG	2 cut(s)	655, 1095
SmoI	CTYRAG	2 cut(s)	655, 1095
Sse8387I	CCTGCAGG	1 cut(s)	814
SsiI	CCGC	2 cut(s)	557, 698
SspMI	CTAG	2 cut(s)	902, 1669
StyD4I	CCNGG	3 cut(s)	268, 849, 1508
StyI	CCWWGG	3 cut(s)	95, 224, 501
TaaI	ACNGT	4 cut(s)	461, 602, 1084, 1184
TaqI	TCGA	4 cut(s)	211, 435, 1298, 1318
TatI	WGTACW	1 cut(s)	826
TauI	GCSGC	1 cut(s)	701
TfiI	GAWTC	4 cut(s)	8, 273, 1457, 1513
Tru1I	TTAA	6 cut(s)	525, 710, 939, 1152, 1325, 1353
Tru9I	TTAA	6 cut(s)	525, 710, 939, 1152, 1325, 1353
TscAI	CASTG	6 cut(s)	466, 474, 523, 1276, 1501, 1566
TseFI	GTSAC	2 cut(s)	1381, 1478
TseI	GCWGC	2 cut(s)	688, 915
Tsp45I	GTSAC	2 cut(s)	1381, 1478
TspDTI	ATGAA	5 cut(s)	200, 419, 528, 644, 732
TspGWI	ACGGA	1 cut(s)	1414
TspRI	CASTG	6 cut(s)	466, 474, 523, 1276, 1501, 1566
VpaK11BI	GGWCC	2 cut(s)	156, 956
XapI	RAATTY	6 cut(s)	163, 293, 979, 1022, 1438, 1555
XceI	RCATGY	2 cut(s)	574, 1370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	484
XmiI	GTMKAC	3 cut(s)	257, 1179, 1505
XmnI	GAANNNNTTC	1 cut(s)	1456
XspI	CTAG	2 cut(s)	902, 1669
Zsp2I	ATGCAT	1 cut(s)	404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.