DNA polymerase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 387 |
| AccII | CGCG | 1 cut(s) | 126 |
| AciI | CCGC | 5 cut(s) | 111, 124, 150, 159, 215 |
| AclWI | GGATC | 1 cut(s) | 379 |
| AcsI | RAATTY | 1 cut(s) | 358 |
| AfaI | GTAC | 1 cut(s) | 55 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AleI | CACNNNNGTG | 1 cut(s) | 28 |
| AluBI | AGCT | 1 cut(s) | 307 |
| AluI | AGCT | 1 cut(s) | 307 |
| AlwI | GGATC | 1 cut(s) | 379 |
| AoxI | GGCC | 3 cut(s) | 121, 139, 283 |
| ApeKI | GCWGC | 2 cut(s) | 156, 347 |
| ApoI | RAATTY | 1 cut(s) | 358 |
| AspS9I | GGNCC | 3 cut(s) | 139, 272, 283 |
| AsuC2I | CCSGG | 1 cut(s) | 143 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BbsI | GAAGAC | 1 cut(s) | 419 |
| BbvI | GCAGC | 2 cut(s) | 168, 334 |
| BccI | CCATC | 3 cut(s) | 109, 218, 305 |
| BcnI | CCSGG | 1 cut(s) | 143 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfuAI | ACCTGC | 1 cut(s) | 387 |
| BisI | GCNGC | 4 cut(s) | 124, 157, 160, 348 |
| BlsI | GCNGC | 4 cut(s) | 125, 158, 161, 349 |
| Bme1390I | CCNGG | 1 cut(s) | 143 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 3 cut(s) | 139, 272, 283 |
| BmiI | GGNNCC | 1 cut(s) | 140 |
| BmrFI | CCNGG | 1 cut(s) | 143 |
| BmrI | ACTGGG | 1 cut(s) | 64 |
| BmsI | GCATC | 2 cut(s) | 202, 241 |
| BmuI | ACTGGG | 1 cut(s) | 64 |
| BpiI | GAAGAC | 1 cut(s) | 419 |
| BpuEI | CTTGAG | 1 cut(s) | 403 |
| BpuMI | CCSGG | 1 cut(s) | 143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bse1I | ACTGG | 2 cut(s) | 70, 137 |
| Bse3DI | GCAATG | 1 cut(s) | 169 |
| BseGI | GGATG | 4 cut(s) | 107, 120, 229, 414 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseMI | GCAATG | 1 cut(s) | 169 |
| BseNI | ACTGG | 2 cut(s) | 70, 137 |
| BseXI | GCAGC | 2 cut(s) | 168, 334 |
| Bsh1236I | CGCG | 1 cut(s) | 126 |
| BshFI | GGCC | 3 cut(s) | 123, 141, 285 |
| BsiSI | CCGG | 2 cut(s) | 142, 369 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BsnI | GGCC | 3 cut(s) | 123, 141, 285 |
| Bsp143I | GATC | 1 cut(s) | 371 |
| BspACI | CCGC | 5 cut(s) | 111, 124, 150, 159, 215 |
| BspANI | GGCC | 3 cut(s) | 123, 141, 285 |
| BspFNI | CGCG | 1 cut(s) | 126 |
| BspLI | GGNNCC | 1 cut(s) | 140 |
| BspMAI | CTGCAG | 1 cut(s) | 352 |
| BspMI | ACCTGC | 1 cut(s) | 387 |
| BspPI | GGATC | 1 cut(s) | 379 |
| BsrDI | GCAATG | 1 cut(s) | 169 |
| BsrI | ACTGG | 2 cut(s) | 70, 137 |
| BssMI | GATC | 1 cut(s) | 371 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstC8I | GCNNGC | 1 cut(s) | 148 |
| BstF5I | GGATG | 4 cut(s) | 107, 120, 229, 414 |
| BstFNI | CGCG | 1 cut(s) | 126 |
| BstKTI | GATC | 1 cut(s) | 374 |
| BstMBI | GATC | 1 cut(s) | 371 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 147, 156, 393 |
| BstNSI | RCATGY | 1 cut(s) | 247 |
| BstSCI | CCNGG | 1 cut(s) | 141 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstUI | CGCG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 168, 334 |
| BstV2I | GAAGAC | 1 cut(s) | 419 |
| BsuRI | GGCC | 3 cut(s) | 123, 141, 285 |
| BtgZI | GCGATG | 1 cut(s) | 141 |
| BtsCI | GGATG | 4 cut(s) | 107, 120, 229, 414 |
| BtsI | GCAGTG | 1 cut(s) | 230 |
| BtsIMutI | CAGTG | 1 cut(s) | 230 |
| BveI | ACCTGC | 1 cut(s) | 387 |
| Cac8I | GCNNGC | 1 cut(s) | 148 |
| Cfr13I | GGNCC | 3 cut(s) | 139, 272, 283 |
| Csp6I | GTAC | 1 cut(s) | 54 |
| CviAII | CATG | 1 cut(s) | 244 |
| CviJI | RGCY | 7 cut(s) | 123, 141, 146, 285, 307, 347, 368 |
| CviKI_1 | RGCY | 7 cut(s) | 123, 141, 146, 285, 307, 347, 368 |
| CviQI | GTAC | 1 cut(s) | 54 |
| DpnI | GATC | 1 cut(s) | 373 |
| DpnII | GATC | 1 cut(s) | 371 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| EcoRI | GAATTC | 1 cut(s) | 358 |
| FaeI | CATG | 1 cut(s) | 247 |
| FaiI | YATR | 9 cut(s) | 28, 58, 60, 108, 245, 270, 281, 320, 329 |
| FatI | CATG | 1 cut(s) | 243 |
| FauI | CCCGC | 1 cut(s) | 104 |
| FauNDI | CATATG | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 4 cut(s) | 124, 157, 160, 348 |
| FokI | GGATG | 3 cut(s) | 114, 127, 236 |
| Fsp4HI | GCNGC | 4 cut(s) | 124, 157, 160, 348 |
| GluI | GCNGC | 4 cut(s) | 124, 157, 160, 348 |
| HaeIII | GGCC | 3 cut(s) | 123, 141, 285 |
| HapII | CCGG | 2 cut(s) | 142, 369 |
| Hin1II | CATG | 1 cut(s) | 247 |
| HindIII | AAGCTT | 1 cut(s) | 305 |
| HinfI | GANTC | 2 cut(s) | 182, 218 |
| HpaII | CCGG | 2 cut(s) | 142, 369 |
| Hpy166II | GTNNAC | 1 cut(s) | 336 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 382 |
| Hpy8I | GTNNAC | 1 cut(s) | 336 |
| HpyAV | CCTTC | 2 cut(s) | 113, 188 |
| HpyCH4V | TGCA | 1 cut(s) | 350 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 147, 156, 393 |
| Hsp92II | CATG | 1 cut(s) | 247 |
| Kzo9I | GATC | 1 cut(s) | 371 |
| LpnPI | CCDG | 5 cut(s) | 83, 118, 155, 382, 382 |
| Lsp1109I | GCAGC | 2 cut(s) | 168, 334 |
| LweI | GCATC | 2 cut(s) | 202, 241 |
| MaeIII | GTNAC | 3 cut(s) | 4, 179, 228 |
| MalI | GATC | 1 cut(s) | 373 |
| MboI | GATC | 1 cut(s) | 371 |
| MboII | GAAGA | 1 cut(s) | 272 |
| MluCI | AATT | 3 cut(s) | 46, 186, 358 |
| MlyI | GAGTC | 1 cut(s) | 176 |
| MmeI | TCCRAC | 1 cut(s) | 381 |
| MnlI | CCTC | 3 cut(s) | 163, 385, 399 |
| MseI | TTAA | 2 cut(s) | 65, 77 |
| MslI | CAYNNNNRTG | 1 cut(s) | 28 |
| MspA1I | CMGCKG | 1 cut(s) | 159 |
| MspI | CCGG | 2 cut(s) | 142, 369 |
| MspR9I | CCNGG | 1 cut(s) | 143 |
| MvnI | CGCG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 147, 156, 393 |
| NciI | CCSGG | 1 cut(s) | 143 |
| NdeI | CATATG | 1 cut(s) | 58 |
| NdeII | GATC | 1 cut(s) | 371 |
| NlaIII | CATG | 1 cut(s) | 247 |
| NlaIV | GGNNCC | 1 cut(s) | 140 |
| NmuCI | GTSAC | 2 cut(s) | 179, 228 |
| NspI | RCATGY | 1 cut(s) | 247 |
| OliI | CACNNNNGTG | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 218 |
| PkrI | GCNGC | 4 cut(s) | 125, 158, 161, 349 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| PspN4I | GGNNCC | 1 cut(s) | 140 |
| PspPI | GGNCC | 3 cut(s) | 139, 272, 283 |
| PstI | CTGCAG | 1 cut(s) | 352 |
| RsaI | GTAC | 1 cut(s) | 55 |
| RsaNI | GTAC | 1 cut(s) | 54 |
| RseI | CAYNNNNRTG | 1 cut(s) | 28 |
| SaqAI | TTAA | 2 cut(s) | 65, 77 |
| SatI | GCNGC | 4 cut(s) | 124, 157, 160, 348 |
| Sau3AI | GATC | 1 cut(s) | 371 |
| Sau96I | GGNCC | 3 cut(s) | 139, 272, 283 |
| SchI | GAGTC | 1 cut(s) | 176 |
| ScrFI | CCNGG | 1 cut(s) | 143 |
| SetI | ASST | 4 cut(s) | 174, 277, 309, 401 |
| SfaNI | GCATC | 2 cut(s) | 202, 241 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 28 |
| SmlI | CTYRAG | 1 cut(s) | 382 |
| SmoI | CTYRAG | 1 cut(s) | 382 |
| Sse9I | AATT | 3 cut(s) | 46, 186, 358 |
| SsiI | CCGC | 5 cut(s) | 111, 124, 150, 159, 215 |
| StyD4I | CCNGG | 1 cut(s) | 141 |
| TasI | AATT | 3 cut(s) | 46, 186, 358 |
| TauI | GCSGC | 2 cut(s) | 126, 162 |
| TfiI | GAWTC | 1 cut(s) | 218 |
| Tru1I | TTAA | 2 cut(s) | 65, 77 |
| Tru9I | TTAA | 2 cut(s) | 65, 77 |
| TscAI | CASTG | 1 cut(s) | 237 |
| TseFI | GTSAC | 2 cut(s) | 179, 228 |
| TseI | GCWGC | 2 cut(s) | 156, 347 |
| Tsp45I | GTSAC | 2 cut(s) | 179, 228 |
| TspGWI | ACGGA | 1 cut(s) | 95 |
| TspRI | CASTG | 1 cut(s) | 237 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XapI | RAATTY | 1 cut(s) | 358 |
| XceI | RCATGY | 1 cut(s) | 247 |