pycom01g00450

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
532038 .. 538181
6144 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g00450.31

Sequence Viewer

Length: 4311 bp
ATGCCTAATTGGCAATCCTGTGATCAGGAATGTTTAGGATATGTGTATGAAAAAGAATGGTCTCATAAACCTAACTTCTTTAGGTCATATTCTCTTAATTACATATTCCTTGGACTTATTGTTCAAGCATATAATGTTTATATGAGACATACTTTAACATGTGAAATGTCCATAAAGTATCATCATATGATTGGCTTTAGGGCACATTTCCAAAAACATTTTGATACACTAGTTCATAGAATGTGTACAATAATAAATTTAAAATTTAATCTAACACCATTTATTAAAATGTTAGTCTCTGATTGTAATTTTGCTATTCTTTTGTTAGTTATGTTTTCGAGGTGTTATTTGAGCCAAAGCAATAGGATTACCTGGTTGACCAATTCAAACAGGAATTCTGTAAGTTATATGAGGATCCGCTATCATAGGAGGGTTTCCAAAAACTATCCTTACCCTTACCTTATTCTAAGCAACATCAATCGAAGCTTGTTTTCTTGCCCAACGGTTATGTCTACATCACTAAGGTTCGCATGGTTTTGTAGAAGAAACAAAATCTTTGTTATGTGTGAAAATAATTTTTCATGTTTAAACAAATTTTTTTATAGAAGTTCAAGTATTACTAAAATGGATTTTCCCTCTCCCTCCCCCTCGCCATTGATAAATGAAGGTCAAATATTTGCTATGCCAAATACAAATACTGATGTCCGCCTGAGTCGCCTAGTTATCATTTTACCAAAATTTGCAAGAAAACGAATAAAAGAAGGCTTTTTATATTATACTTATTCACCCAACTATGGATTGACAATTTTGACCTTATTAGGTTTAAAAAAAAAAAAAAAAATTCTAAATACATCCCAAATCACTTTTAGGGTATTATTTATCTTCTCAACTATCAAAACCCTCACACCCTCCATTATTTCGGAAGCTTCACATGAGGTAAGACTTCATATTTTTCATTGTGTTAGTGATTTCGATGACATCGATAATTATTTAATCTTGTGTTCGCTGCGTTATTTAAACTTCTATATTCATATTCATCTAACTATACAAAATAACAATCAAATCAGAAACTCACCATTTGGTTGCTTTGCGCGGTCCATAATCTTGTTAAATAGAAAGTACACAACGATCTCATCTTTGGTGGGATTAAATCGATACCCTACCATCAACATATCAAACCCCTTGTACTTGTCAGTGGACTACAAGGAAGCTGAAGATGACTGCGTGGAAGCTAAGGATGCCATGACAAAAGACAAGGACAATGACGTAGTTGATATTTTCTGTCACGGTTTGAGAATAACAGAGCATATTCTATGCCTTCCTTTACCAATTAAAGCTAAAACCCTAATTGGTGATATGCTAATTACCCTATATAGCTTAGTAACTCATTCTGTATGGGCATTGAACTTTCCATTTCCATGTGAATCTTTAAAAATTTGTAATTTTTGCTTCTTTCTATGTGGGTCTTTACAGATGTTGAATTTTTACAAATGTAGAATTTATGGCTTTTTATGTGTGGGCTTTTCCAAATGTTATGGCTTATTCCATTTACGTTTAACTCTTTACAAATATTGGATTTATGGCTTATTCCATATCTGTGTGGACCTTTACAAATTTTCAACTTGTGTTTCGTGTGGGCCTTTACAAATGTTGAACTTCTACTTCATTTCGTGTGAACGTTTACGAATGTTGAATTTATTGCTCATTCCATTTCTGTGTGGGCCTTTACAAATGTTGAATTTATGGATCATTCCATTAGCTTGTGGGTATTTACAAAAGTCGAATTTATGGCTCATTCCATGTGGATCTTTAAAAATATTGAATTTATGGCTCATTCCATTTGCATGTGGGCTTTTACAAATGAATTTCTGGCTCATTCCATTACCATATGGTTGTGGCTCATACCATTTACATTTGGGCATTACAAATGTTGAATTTATGGTTTATTCCGTGTGGCCATTGACAAATGTTAAATTTGTGGCTCATCTCATTTTTCGTGCAGGCTTTACAAATGTGAAAATTTTGCCTCATTCTTTGTCATCCATATGGACATTCACAAATGTTGAATTTGTGGCTCATTTTATTTCCGTGTATGCTTTTACAATATTGAATTTGTGGGCCTTTACAAGTGTTGAAGTTGTGGCTCATTTCGTTTCCATGTTGGTTTTTACAAATGTTGAATTTGTGGGCCATTATAAACTTGAATTAATTGTTAATTTCGTGTTTGTGTGGGCTTTTACAAATGTTGAATATGTGGCTCATTCCATTTCGGTATGGGCTTTTACAAATTTTGAACTTGTACCTTATTCTATGTCAACCTTTACTAATGTTGGATCTGTGGCTTATTCCGTGTGGGCCTTTAAAAATGTTAAATTTGTAGCTCATTCCGTGTGGACCTTTACAAATGTTAAAATTATGGCCCATTCATTTTCATGTGGGTTTTTACAAATGTTGAATTTGTGGGCATTTACAAATGTTGAATTTGTGCTTCATTCTATTTCGGAGTGGTTAAAAATTTTGAACTTGTATTCATCTTCCATATGGGCATTTACAAATATTAAATTTATGAATCGTTCTGTTTGTGCCTTTAAAAATGATGAATTTGTGACGCATTATGTGTGGGCATTGACATGTATTGAATTTGTGCCTCATTCCATTTCCATGTTGGGTAAATTTGTGGTTCATTCCATTTCTGTGTGTGCATTTACAAATGTGGAATTTGTGGCTCATTTCATGTGGACCTTTACAAATATTGAATTTGTAGGTCATTCTATATCTGTGTGGAACTTTACAGATTTTAAATTTGTGACTCATTCCTATTTTGTGTGGGCATTGACAAATGTTGAGTTTGTGGGTCATTCCATTTTTGTATGGGCATTTGCAAATGTTGACTTTTTGCTTCATTCCATATCGAATCTAGCCTTTCTTGAACTTCAATTTCGTCCATCCACCTTGCTCCAAGCATGTGCTATTCATTCCAAGCCCAAAACTGCTCCGAAATGCTCCAAATTGCACTTTCTTGCTACTTTAGTCAATTGGACCTACAAACACACGAAAATACTAACTAAGTTGCATAAATATGCTCCTATCAGGACTCCAAAAAGGTTTGAAGTTTTTCTCAGAAACCAGCGACTTTCCCAAATTCCGACGAACCAGATGGCAGCGACCGACGAGGACCACCGGAGAAGACTAGGGAATATTCCGTCAAATTTGACGGAATATTCTAACATCCTAACGTCCACAGCCTCTGCCTGCGCGTGGTGGCGCGTAAAGCTGTGCCGTAGGCGACGTGTGAAGGTGCATCCAGCCTCCAATATTGATTTCATATATTTAAACCCTAGGTTTGAGCAACCTATGGGGGTTTTATTTAAGTTTCCGTATATGTGTTCTAATGAATTTAAAAATAGTTATTTCACATATAGGGGAAACGTATCCCGAGGACTTAAGGGGTCAGTGGGTAGTTTGTTTTTATACCTATATATAGTTATAGTTTCCATAAATGCGTATTTACTTCATTTTATGCTTATGTTGCCAAGTATCATTATTGTGATATTAATTGTGATGCATGCTGCTATAGGGTTGGGATATTACTGTCATAACATTCATACATATTTGTACATGCTCATCTTGCTGCACCCTGGTGTTAGTACTCCGCCCAGGCCAAGGCCAGTCCTTCACGTGTATGTTCACATCTGCACCATTCACTCTGCATTAGGCAATTCTGACTCATATGTGACCACGCCTTGCCGCCAGTCTTTACATGATCGTACAACTTTGACTCGTGTGCTAGCACATATGGATGAGCAATTGATTATACTTGATTACCACATGACTATATTACTGTGGCATTTGATATATCATGACTTGGCATATTTTTGGTTATGTTGTTATTGTATTGTTGTTACATACTTACGTAGCATGTTCGAAAATAAAGGTTTTCTTACAAACGTTGTTTTGCTGACCCACTCAACTTTGTTTTTTCTAAACCCTATAAATTATCATTCTATTCCGGGGATTAGATTGGGGGGATTTTGGACGAATTTAGTTAAAACAAAATTAAATGGCAAGAATTCTTCTCCACACATGAAACATATGACAATGCCCCAAATTATTCTTCTCAAGTTTCTTAATTATCAAAAGCATGATAGAGATACATCTCAAAGATCATTAAGTTCTATGAAAATCATAAGCATTGACAAAGCATTTGTAACTATGAAAATTCATAACGATTATGTGAAATTCCCTTATATTCTAGCATCAAATCCCTGCATGCAAACTAAGTGTGCACCCTTAATAAACATACAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1437

Amino Acids

167.29

Weight (kDa)

9.3

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2196
AccI GTMKAC 1 cut(s) 512
AccII CGCG 3 cut(s) 1093, 3257, 3267
AciI CCGC 5 cut(s) 418, 706, 1093, 3653, 3748
AclI AACGTT 2 cut(s) 1678, 3948
AclWI GGATC 5 cut(s) 409, 422, 1754, 1813, 2341
AcoI YGGCCR 1 cut(s) 1955
AcuI CTGAAG 1 cut(s) 1233
AcvI CACGTG 1 cut(s) 3679
AfaI GTAC 7 cut(s) 247, 1121, 1187, 2301, 3617, 3649, 3769
AfiI CCNNNNNNNGG 3 cut(s) 794, 3258, 3663
AflII CTTAAG 1 cut(s) 3443
AflIII ACRYGT 4 cut(s) 158, 2630, 3289, 3678
AhlI ACTAGT 1 cut(s) 229
AjiI CACGTC 1 cut(s) 3290
AjnI CCWGG 3 cut(s) 371, 3637, 3656
AjuI GAANNNNNNNTTGG 4 cut(s) 3305, 3337, 4098, 4130
AleI CACNNNNGTG 1 cut(s) 3639
AloI GAACNNNNNNTCC 2 cut(s) 105, 137
AluBI AGCT 9 cut(s) 486, 926, 1211, 1232, 1337, 1377, 1760, 2381, 3274
AluI AGCT 9 cut(s) 486, 926, 1211, 1232, 1337, 1377, 1760, 2381, 3274
Alw21I GWGCWC 1 cut(s) 4288
Alw26I GTCTC 3 cut(s) 66, 139, 301
Alw44I GTGCAC 1 cut(s) 4284
AlwI GGATC 5 cut(s) 409, 422, 1754, 1813, 2341
AlwNI CAGNNNCTG 1 cut(s) 3248
Ama87I CYCGRG 1 cut(s) 3435
AoxI GGCC 9 cut(s) 1637, 1721, 1955, 2118, 2188, 2355, 2418, 3659, 3665
ApaLI GTGCAC 1 cut(s) 4284
ApeKI GCWGC 4 cut(s) 1006, 3161, 3569, 3631
ArsI GACNNNNNNTTYG 2 cut(s) 4187, 4219
AseI ATTAAT 2 cut(s) 2207, 3554
Asp700I GAANNNNTTC 1 cut(s) 3114
AspA2I CCTAGG 1 cut(s) 3338
AspLEI GCGC 3 cut(s) 1093, 3257, 3267
AsuC2I CCSGG 1 cut(s) 4011
AsuHPI GGTGA 3 cut(s) 777, 1065, 1364
AsuII TTCGAA 1 cut(s) 3924
AsuNHI GCTAGC 1 cut(s) 3787
AvaI CYCGRG 1 cut(s) 3435
AvaII GGWCC 6 cut(s) 1095, 1603, 2394, 2739, 3039, 3175
AvrII CCTAGG 1 cut(s) 3338
BaeGI GKGCMC 2 cut(s) 205, 4288
BaeI ACNNNNGTAYC 2 cut(s) 216, 249
BalI TGGCCA 1 cut(s) 1957
BamHI GGATCC 1 cut(s) 414
BauI CACGAG 1 cut(s) 3780
BbrPI CACGTG 1 cut(s) 3679
BbsI GAAGAC 1 cut(s) 3193
Bbv12I GWGCWC 1 cut(s) 4288
BbvI GCAGC 4 cut(s) 993, 3173, 3556, 3618
BccI CCATC 3 cut(s) 1172, 2953, 3151
BceAI ACGGC 1 cut(s) 3264
BciT130I CCWGG 3 cut(s) 373, 3639, 3658
BciVI GTATCC 1 cut(s) 3442
BclI TGATCA 1 cut(s) 22
BcnI CCSGG 1 cut(s) 4011
BcoDI GTCTC 3 cut(s) 66, 139, 301
BcuI ACTAGT 1 cut(s) 229
BfaI CTAG 7 cut(s) 230, 719, 2918, 3191, 3339, 3788, 4253
BfmI CTRYAG 1 cut(s) 3573
BfrI CTTAAG 1 cut(s) 3443
BfuI GTATCC 1 cut(s) 3442
BglI GCCNNNNNGGC 1 cut(s) 10
BisI GCNGC 5 cut(s) 1007, 3162, 3570, 3632, 3748
BlnI CCTAGG 1 cut(s) 3338
BlsI GCNGC 5 cut(s) 1008, 3163, 3571, 3633, 3749
BmcAI AGTACT 1 cut(s) 3649
Bme1390I CCNGG 4 cut(s) 373, 3639, 3658, 4011
Bme18I GGWCC 6 cut(s) 1095, 1603, 2394, 2739, 3039, 3175
BmeT110I CYCGRG 1 cut(s) 3435
BmgBI CACGTC 1 cut(s) 3290
BmiI GGNNCC 1 cut(s) 416
BmrFI CCNGG 4 cut(s) 373, 3639, 3658, 4011
BmsI GCATC 4 cut(s) 1228, 3310, 3552, 4265
BmtI GCTAGC 1 cut(s) 3791
BpiI GAAGAC 1 cut(s) 3193
Bpu10I CCTNAGC 1 cut(s) 1233
Bpu14I TTCGAA 1 cut(s) 3924
BpuEI CTTGAG 1 cut(s) 4103
BpuMI CCSGG 1 cut(s) 4011
Bsa29I ATCGAT 2 cut(s) 981, 1153
BsaAI YACGTR 2 cut(s) 3679, 3914
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 7 cut(s) 109, 3338, 3436, 3637, 3656, 3662, 4010
BsaWI WCCGGW 1 cut(s) 3180
Bsc4I CCNNNNNNNGG 3 cut(s) 794, 3258, 3663
Bse1I ACTGG 2 cut(s) 3668, 3751
BseBI CCWGG 3 cut(s) 373, 3639, 3658
BseCI ATCGAT 2 cut(s) 981, 1153
BseDI CCNNGG 7 cut(s) 109, 3338, 3436, 3637, 3656, 3662, 4010
BseGI GGATG 7 cut(s) 851, 1243, 2039, 2945, 3228, 3301, 3805
BseLI CCNNNNNNNGG 3 cut(s) 794, 3258, 3663
BseMII CTCAG 2 cut(s) 701, 3133
BseNI ACTGG 2 cut(s) 3668, 3751
BseSI GKGCMC 2 cut(s) 205, 4288
BseXI GCAGC 4 cut(s) 993, 3173, 3556, 3618
BsgI GTGCAG 3 cut(s) 2019, 3617, 3679
Bsh1236I CGCG 3 cut(s) 1093, 3257, 3267
Bsh1285I CGRYCG 1 cut(s) 3168
BshFI GGCC 9 cut(s) 1639, 1723, 1957, 2120, 2190, 2357, 2420, 3661, 3667
BshVI ATCGAT 2 cut(s) 981, 1153
BsiEI CGRYCG 1 cut(s) 3168
BsiHKAI GWGCWC 1 cut(s) 4288
BsiHKCI CYCGRG 1 cut(s) 3435
BsiSI CCGG 2 cut(s) 3181, 4010
BslI CCNNNNNNNGG 3 cut(s) 794, 3258, 3663
BsmAI GTCTC 3 cut(s) 66, 139, 301
BsnI GGCC 9 cut(s) 1639, 1723, 1957, 2120, 2190, 2357, 2420, 3661, 3667
Bso31I GGTCTC 1 cut(s) 66
BsoBI CYCGRG 1 cut(s) 3435
Bsp119I TTCGAA 1 cut(s) 3924
Bsp1286I GDGCHC 2 cut(s) 205, 4288
Bsp1407I TGTACA 2 cut(s) 245, 3615
Bsp143I GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
BspACI CCGC 5 cut(s) 418, 706, 1093, 3653, 3748
BspANI GGCC 9 cut(s) 1639, 1723, 1957, 2120, 2190, 2357, 2420, 3661, 3667
BspCNI CTCAG 2 cut(s) 702, 3132
BspDI ATCGAT 2 cut(s) 981, 1153
BspFNI CGCG 3 cut(s) 1093, 3257, 3267
BspHI TCATGA 1 cut(s) 3859
BspLI GGNNCC 1 cut(s) 416
BspOI GCTAGC 1 cut(s) 3791
BspPI GGATC 5 cut(s) 409, 422, 1754, 1813, 2341
BspT104I TTCGAA 1 cut(s) 3924
BspTI CTTAAG 1 cut(s) 3443
BspTNI GGTCTC 1 cut(s) 66
BsrGI TGTACA 2 cut(s) 245, 3615
BsrI ACTGG 2 cut(s) 3668, 3751
BssECI CCNNGG 7 cut(s) 109, 3338, 3436, 3637, 3656, 3662, 4010
BssMI GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
BssSI CACGAG 1 cut(s) 3780
BssT1I CCWWGG 3 cut(s) 109, 3338, 3662
Bst2BI CACGAG 1 cut(s) 3780
Bst2UI CCWGG 3 cut(s) 373, 3639, 3658
Bst4CI ACNGT 4 cut(s) 505, 1289, 3593, 3843
BstAFI CTTAAG 1 cut(s) 3443
BstAUI TGTACA 2 cut(s) 245, 3615
BstBAI YACGTR 2 cut(s) 3679, 3914
BstBI TTCGAA 1 cut(s) 3924
BstC8I GCNNGC 5 cut(s) 2002, 3253, 3567, 3789, 4271
BstDEI CTNAG 8 cut(s) 467, 521, 710, 1233, 1378, 3066, 3119, 4278
BstF5I GGATG 7 cut(s) 851, 1243, 2039, 2945, 3228, 3301, 3805
BstFNI CGCG 3 cut(s) 1093, 3257, 3267
BstHHI GCGC 3 cut(s) 1093, 3257, 3267
BstKTI GATC 8 cut(s) 25, 417, 1131, 1749, 1808, 2336, 3766, 4166
BstMAI GTCTC 3 cut(s) 66, 139, 301
BstMBI GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
BstMCI CGRYCG 1 cut(s) 3168
BstMWI GCNNNNNNNGC 6 cut(s) 10, 714, 1238, 3271, 3529, 3628
BstNI CCWGG 3 cut(s) 373, 3639, 3658
BstNSI RCATGY 8 cut(s) 162, 1848, 2634, 2967, 3569, 3622, 3922, 4273
BstSCI CCNGG 4 cut(s) 371, 3637, 3656, 4009
BstSFI CTRYAG 1 cut(s) 3573
BstSLI GKGCMC 2 cut(s) 205, 4288
BstSNI TACGTA 1 cut(s) 3914
BstUI CGCG 3 cut(s) 1093, 3257, 3267
BstV1I GCAGC 4 cut(s) 993, 3173, 3556, 3618
BstV2I GAAGAC 1 cut(s) 3193
BstX2I RGATCY 3 cut(s) 414, 1805, 2333
BstYI RGATCY 3 cut(s) 414, 1805, 2333
Bsu15I ATCGAT 2 cut(s) 981, 1153
BsuI GTATCC 1 cut(s) 3442
BsuRI GGCC 9 cut(s) 1639, 1723, 1957, 2120, 2190, 2357, 2420, 3661, 3667
BsuTUI ATCGAT 2 cut(s) 981, 1153
BtrI CACGTC 1 cut(s) 3290
BtsCI GGATG 7 cut(s) 851, 1243, 2039, 2945, 3228, 3301, 3805
BtsIMutI CAGTG 2 cut(s) 1200, 3459
Cac8I GCNNGC 5 cut(s) 2002, 3253, 3567, 3789, 4271
CaiI CAGNNNCTG 1 cut(s) 3248
CciI TCATGA 1 cut(s) 3859
CfoI GCGC 3 cut(s) 1093, 3257, 3267
ClaI ATCGAT 2 cut(s) 981, 1153
CseI GACGC 1 cut(s) 2617
CsiI ACCWGGT 1 cut(s) 371
Csp6I GTAC 7 cut(s) 246, 1120, 1186, 2300, 3616, 3648, 3768
CviQI GTAC 7 cut(s) 246, 1120, 1186, 2300, 3616, 3648, 3768
DdeI CTNAG 8 cut(s) 467, 521, 710, 1233, 1378, 3066, 3119, 4278
DpnI GATC 8 cut(s) 24, 416, 1130, 1748, 1807, 2335, 3765, 4165
DpnII GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
EaeI YGGCCR 1 cut(s) 1955
EciI GGCGGA 2 cut(s) 695, 3642
Eco105I TACGTA 1 cut(s) 3914
Eco130I CCWWGG 3 cut(s) 109, 3338, 3662
Eco31I GGTCTC 1 cut(s) 66
Eco47I GGWCC 6 cut(s) 1095, 1603, 2394, 2739, 3039, 3175
Eco57I CTGAAG 1 cut(s) 1233
Eco72I CACGTG 1 cut(s) 3679
Eco88I CYCGRG 1 cut(s) 3435
EcoRI GAATTC 2 cut(s) 394, 4069
EcoRII CCWGG 3 cut(s) 371, 3637, 3656
EcoT14I CCWWGG 3 cut(s) 109, 3338, 3662
EcoT22I ATGCAT 1 cut(s) 3567
ErhI CCWWGG 3 cut(s) 109, 3338, 3662
FalI AAGNNNNNCTT 2 cut(s) 3924, 3956
FauNDI CATATG 7 cut(s) 186, 1888, 2045, 2540, 3730, 3795, 4092
FbaI TGATCA 1 cut(s) 22
FblI GTMKAC 1 cut(s) 512
Fnu4HI GCNGC 5 cut(s) 1007, 3162, 3570, 3632, 3748
FokI GGATG 7 cut(s) 838, 1250, 2026, 2932, 3215, 3288, 3812
Fsp4HI GCNGC 5 cut(s) 1007, 3162, 3570, 3632, 3748
FspBI CTAG 7 cut(s) 230, 719, 2918, 3191, 3339, 3788, 4253
GlaI GCGC 3 cut(s) 1092, 3256, 3266
GluI GCNGC 5 cut(s) 1007, 3162, 3570, 3632, 3748
HaeIII GGCC 9 cut(s) 1639, 1723, 1957, 2120, 2190, 2357, 2420, 3661, 3667
HapII CCGG 2 cut(s) 3181, 4010
HgaI GACGC 1 cut(s) 2617
HhaI GCGC 3 cut(s) 1093, 3257, 3267
Hin6I GCGC 3 cut(s) 1091, 3255, 3265
HinP1I GCGC 3 cut(s) 1091, 3255, 3265
HincII GTYRAC 3 cut(s) 378, 2316, 2890
HindII GTYRAC 3 cut(s) 378, 2316, 2890
HindIII AAGCTT 2 cut(s) 484, 924
HinfI GANTC 8 cut(s) 712, 1424, 2569, 2809, 2914, 3094, 3725, 3778
HpaII CCGG 2 cut(s) 3181, 4010
HphI GGTGA 3 cut(s) 777, 1065, 1364
Hpy188I TCNGA 8 cut(s) 301, 922, 1067, 2503, 2997, 3122, 3147, 3724
Hpy188III TCNNGA 5 cut(s) 26, 2927, 3091, 3435, 3860
Hpy99I CGWCG 3 cut(s) 3151, 3173, 3291
HpyAV CCTTC 5 cut(s) 659, 755, 1328, 3289, 3683
HpyCH4III ACNGT 4 cut(s) 505, 1289, 3593, 3843
HpyCH4IV ACGT 9 cut(s) 1266, 1552, 1678, 3236, 3289, 3429, 3678, 3913, 3948
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 714, 1238, 3271, 3529, 3628
HpyF3I CTNAG 8 cut(s) 467, 521, 710, 1233, 1378, 3066, 3119, 4278
HpySE526I ACGT 9 cut(s) 1266, 1552, 1678, 3236, 3289, 3429, 3678, 3913, 3948
HspAI GCGC 3 cut(s) 1091, 3255, 3265
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
LmnI GCTCC 4 cut(s) 2961, 2998, 3008, 3088
Lsp1109I GCAGC 4 cut(s) 993, 3173, 3556, 3618
LweI GCATC 4 cut(s) 1228, 3310, 3552, 4265
MabI ACCWGGT 1 cut(s) 371
MaeI CTAG 7 cut(s) 230, 719, 2918, 3191, 3339, 3788, 4253
MaeII ACGT 9 cut(s) 1266, 1552, 1678, 3236, 3289, 3429, 3678, 3913, 3948
MaeIII GTNAC 7 cut(s) 1283, 1381, 2605, 2806, 3733, 3901, 4207
MalI GATC 8 cut(s) 24, 416, 1130, 1748, 1807, 2335, 3765, 4165
MboI GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
MboII GAAGA 7 cut(s) 555, 874, 1226, 2526, 3198, 4065, 4106
MfeI CAATTG 2 cut(s) 3034, 3806
MflI RGATCY 3 cut(s) 414, 1805, 2333
MhlI GDGCHC 2 cut(s) 205, 4288
MlsI TGGCCA 1 cut(s) 1957
MluNI TGGCCA 1 cut(s) 1957
MlyI GAGTC 5 cut(s) 721, 2803, 3088, 3719, 3772
MmeI TCCRAC 2 cut(s) 2311, 3170
Mox20I TGGCCA 1 cut(s) 1957
Mph1103I ATGCAT 1 cut(s) 3567
MroXI GAANNNNTTC 1 cut(s) 3114
MscI TGGCCA 1 cut(s) 1957
Msp20I TGGCCA 1 cut(s) 1957
MspCI CTTAAG 1 cut(s) 3443
MspI CCGG 2 cut(s) 3181, 4010
MspR9I CCNGG 4 cut(s) 373, 3639, 3658, 4011
MssI GTTTAAAC 1 cut(s) 588
MunI CAATTG 2 cut(s) 3034, 3806
MvaI CCWGG 3 cut(s) 373, 3639, 3658
MvnI CGCG 3 cut(s) 1093, 3257, 3267
MwoI GCNNNNNNNGC 6 cut(s) 10, 714, 1238, 3271, 3529, 3628
NciI CCSGG 1 cut(s) 4011
NdeI CATATG 7 cut(s) 186, 1888, 2045, 2540, 3730, 3795, 4092
NdeII GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
NheI GCTAGC 1 cut(s) 3787
NlaIV GGNNCC 1 cut(s) 416
NmuCI GTSAC 4 cut(s) 1283, 2605, 2806, 3733
NsiI ATGCAT 1 cut(s) 3567
NspI RCATGY 8 cut(s) 162, 1848, 2634, 2967, 3569, 3622, 3922, 4273
NspV TTCGAA 1 cut(s) 3924
OliI CACNNNNGTG 1 cut(s) 3639
PaeI GCATGC 2 cut(s) 3569, 4273
PagI TCATGA 1 cut(s) 3859
PciI ACATGT 2 cut(s) 158, 2630
PcsI WCGNNNNNNNCGW 1 cut(s) 978
PdmI GAANNNNTTC 1 cut(s) 3114
PfeI GAWTC 3 cut(s) 1424, 2569, 2914
PkrI GCNGC 5 cut(s) 1008, 3163, 3571, 3633, 3749
PleI GAGTC 5 cut(s) 720, 2803, 3088, 3719, 3772
PmaCI CACGTG 1 cut(s) 3679
PmeI GTTTAAAC 1 cut(s) 588
PmlI CACGTG 1 cut(s) 3679
PpsI GAGTC 5 cut(s) 720, 2803, 3088, 3719, 3772
Ppu21I YACGTR 2 cut(s) 3679, 3914
PscI ACATGT 2 cut(s) 158, 2630
PshBI ATTAAT 2 cut(s) 2207, 3554
PsiI TTATAA 1 cut(s) 2196
Psp1406I AACGTT 2 cut(s) 1678, 3948
Psp6I CCWGG 3 cut(s) 371, 3637, 3656
PspCI CACGTG 1 cut(s) 3679
PspGI CCWGG 3 cut(s) 371, 3637, 3656
PspN4I GGNNCC 1 cut(s) 416
PstNI CAGNNNCTG 1 cut(s) 3248
PsuI RGATCY 3 cut(s) 414, 1805, 2333
RsaI GTAC 7 cut(s) 247, 1121, 1187, 2301, 3617, 3649, 3769
RsaNI GTAC 7 cut(s) 246, 1120, 1186, 2300, 3616, 3648, 3768
SatI GCNGC 5 cut(s) 1007, 3162, 3570, 3632, 3748
Sau3AI GATC 8 cut(s) 22, 414, 1128, 1746, 1805, 2333, 3763, 4163
ScaI AGTACT 1 cut(s) 3649
SchI GAGTC 5 cut(s) 721, 2803, 3088, 3719, 3772
ScrFI CCNGG 4 cut(s) 373, 3639, 3658, 4011
SduI GDGCHC 2 cut(s) 205, 4288
SexAI ACCWGGT 1 cut(s) 371
SfaNI GCATC 4 cut(s) 1228, 3310, 3552, 4265
SfcI CTRYAG 1 cut(s) 3573
SfuI TTCGAA 1 cut(s) 3924
SinI GGWCC 6 cut(s) 1095, 1603, 2394, 2739, 3039, 3175
SmlI CTYRAG 2 cut(s) 3443, 4118
SmoI CTYRAG 2 cut(s) 3443, 4118
SnaBI TACGTA 1 cut(s) 3914
SpeI ACTAGT 1 cut(s) 229
SphI GCATGC 2 cut(s) 3569, 4273
SsiI CCGC 5 cut(s) 418, 706, 1093, 3653, 3748
SspI AATATT 9 cut(s) 675, 1571, 1818, 2106, 2557, 2752, 3199, 3221, 3316
SspMI CTAG 7 cut(s) 230, 719, 2918, 3191, 3339, 3788, 4253
StyD4I CCNGG 4 cut(s) 371, 3637, 3656, 4009
StyI CCWWGG 3 cut(s) 109, 3338, 3662
TaaI ACNGT 4 cut(s) 505, 1289, 3593, 3843
TaiI ACGT 9 cut(s) 1269, 1555, 1681, 3239, 3292, 3432, 3681, 3916, 3951
TaqI TCGA 8 cut(s) 338, 481, 972, 981, 1153, 1781, 2912, 3924
TaqII GACCGA 1 cut(s) 3182
TatI WGTACW 5 cut(s) 245, 1119, 1185, 3615, 3647
TauI GCSGC 1 cut(s) 3750
TfiI GAWTC 3 cut(s) 1424, 2569, 2914
TscAI CASTG 2 cut(s) 1200, 3459
TseFI GTSAC 4 cut(s) 1283, 2605, 2806, 3733
TseI GCWGC 4 cut(s) 1006, 3161, 3569, 3631
Tsp45I GTSAC 4 cut(s) 1283, 2605, 2806, 3733
TspGWI ACGGA 7 cut(s) 1939, 2077, 2338, 2377, 3192, 3230, 3366
TspRI CASTG 2 cut(s) 1200, 3459
Vha464I CTTAAG 1 cut(s) 3443
VneI GTGCAC 1 cut(s) 4284
VpaK11BI GGWCC 6 cut(s) 1095, 1603, 2394, 2739, 3039, 3175
VspI ATTAAT 2 cut(s) 2207, 3554
XceI RCATGY 8 cut(s) 162, 1848, 2634, 2967, 3569, 3622, 3922, 4273
XcmI CCANNNNNNNNNTGG 1 cut(s) 2662
XmaJI CCTAGG 1 cut(s) 3338
XmiI GTMKAC 1 cut(s) 512
XmnI GAANNNNTTC 1 cut(s) 3114
XspI CTAG 7 cut(s) 230, 719, 2918, 3191, 3339, 3788, 4253
ZrmI AGTACT 1 cut(s) 3649
Zsp2I ATGCAT 1 cut(s) 3567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.