pycom17g16670

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
14729077 .. 14730370
1294 bp
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UTR
Exon/CDS
Intron
pycom17g16670.9

Sequence Viewer

Length: 732 bp
ATGCATAACAAAGATACATATCAAAAGTCATTAAGCTTTGTGAAAACTATAAGCGTTGACAAGGCACTCATCACTATGAAACGCATGAGATTTGTACCAAGGATTTACTTAACAACAATTACTGTTAACCCCCAACCCACATACATAATAATTCATATAAAACATATAATCATGGCTTCAAATTCTCCTCTAACTAAAGAGAATGAACTAAGTCTAAGGATAGAAAGAACCAAGAAAAACGCTCCACACTCCAATGGCATGCACGGCACTCCCTTGGATGGCAGGTTGCACAATTCCTCCTTTCCTTGCTTCCTTGCTTGCGGCACTAGGGTGTTGAATGAATGTGTGATAGGCACTCTTAGTGAAGGAAAAGGATTGCACAATCCCATTGAAAAAGGGTTAATTCAGGGCAGAAATCAAATGGGAATTGGATTAGGGAGTTCGAAGGTTTCTAGAAGGGATGGTTTAGGGCAGATTCCTAAACCTAAAGGGCCAAGGATACATGATATTTGTGTAGGAGAAGGATTTTGGATAAGGTTCCTAGAAACTGAATTAGGTAATAGGATAATAAGGTTGGATAAGGTTGCTTGTTTCTTGCTTCTTCCTTATCCTCTTTGCATTTGGGCTTCCTCCACCAGATTTGTAGCCTTTCCTACTATCCAATCCATGCCCAAAAATGCTCTAAATAGCCTCAAAATGCTCTTTCTTGCTCCTTTTGCCATTAGGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

244

Amino Acids

27.25

Weight (kDa)

10.07

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 273
AciI CCGC 1 cut(s) 321
AcsI RAATTY 1 cut(s) 181
AfaI GTAC 1 cut(s) 96
AfiI CCNNNNNNNGG 1 cut(s) 278
AgsI TTSAA 3 cut(s) 180, 337, 392
AleI CACNNNNGTG 1 cut(s) 329
AluBI AGCT 1 cut(s) 36
AluI AGCT 1 cut(s) 36
AoxI GGCC 1 cut(s) 491
ApoI RAATTY 1 cut(s) 181
AspS9I GGNCC 2 cut(s) 491, 726
AsuII TTCGAA 1 cut(s) 443
AvaII GGWCC 1 cut(s) 726
BccI CCATC 2 cut(s) 272, 455
BceAI ACGGC 1 cut(s) 280
BciVI GTATCC 1 cut(s) 492
BfaI CTAG 3 cut(s) 327, 453, 542
BfuAI ACCTGC 1 cut(s) 273
BfuI GTATCC 1 cut(s) 492
BisI GCNGC 1 cut(s) 322
BlsI GCNGC 1 cut(s) 323
Bme18I GGWCC 1 cut(s) 726
BmgT120I GGNCC 2 cut(s) 491, 726
BmiI GGNNCC 1 cut(s) 539
Bpu14I TTCGAA 1 cut(s) 443
BsaBI GATNNNNATC 1 cut(s) 18
BsaJI CCNNGG 3 cut(s) 98, 273, 494
BsaXI ACNNNNNCTCC 2 cut(s) 281, 311
Bsc4I CCNNNNNNNGG 1 cut(s) 278
Bse8I GATNNNNATC 1 cut(s) 18
BseDI CCNNGG 3 cut(s) 98, 273, 494
BseGI GGATG 2 cut(s) 283, 466
BseJI GATNNNNATC 1 cut(s) 18
BseLI CCNNNNNNNGG 1 cut(s) 278
BseRI GAGGAG 1 cut(s) 177
BshFI GGCC 1 cut(s) 493
BslI CCNNNNNNNGG 1 cut(s) 278
BsnI GGCC 1 cut(s) 493
Bsp119I TTCGAA 1 cut(s) 443
BspACI CCGC 1 cut(s) 321
BspANI GGCC 1 cut(s) 493
BspLI GGNNCC 1 cut(s) 539
BspMI ACCTGC 1 cut(s) 273
BspT104I TTCGAA 1 cut(s) 443
BssECI CCNNGG 3 cut(s) 98, 273, 494
BssT1I CCWWGG 3 cut(s) 98, 273, 494
Bst4CI ACNGT 1 cut(s) 124
BstBI TTCGAA 1 cut(s) 443
BstC8I GCNNGC 2 cut(s) 260, 319
BstDEI CTNAG 3 cut(s) 209, 215, 359
BstF5I GGATG 2 cut(s) 283, 466
BstMWI GCNNNNNNNGC 2 cut(s) 264, 716
BstNSI RCATGY 1 cut(s) 262
BsuI GTATCC 1 cut(s) 492
BsuRI GGCC 1 cut(s) 493
BtsCI GGATG 2 cut(s) 283, 466
BveI ACCTGC 1 cut(s) 273
Cac8I GCNNGC 2 cut(s) 260, 319
Cfr13I GGNCC 2 cut(s) 491, 726
Csp6I GTAC 1 cut(s) 95
CspCI CAANNNNNGTGG 2 cut(s) 622, 657
CviAII CATG 5 cut(s) 85, 172, 259, 503, 667
CviJI RGCY 6 cut(s) 36, 176, 493, 626, 647, 690
CviKI_1 RGCY 6 cut(s) 36, 176, 493, 626, 647, 690
CviQI GTAC 1 cut(s) 95
DdeI CTNAG 3 cut(s) 209, 215, 359
Eco130I CCWWGG 3 cut(s) 98, 273, 494
Eco47I GGWCC 1 cut(s) 726
EcoO109I RGGNCCY 1 cut(s) 726
EcoT14I CCWWGG 3 cut(s) 98, 273, 494
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 98, 273, 494
FaeI CATG 5 cut(s) 88, 175, 262, 506, 670
FatI CATG 5 cut(s) 84, 171, 258, 502, 666
Fnu4HI GCNGC 1 cut(s) 322
FokI GGATG 2 cut(s) 290, 473
Fsp4HI GCNGC 1 cut(s) 322
FspBI CTAG 3 cut(s) 327, 453, 542
GluI GCNGC 1 cut(s) 322
HaeIII GGCC 1 cut(s) 493
Hin1II CATG 5 cut(s) 88, 175, 262, 506, 670
HincII GTYRAC 2 cut(s) 58, 127
HindII GTYRAC 2 cut(s) 58, 127
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 1 cut(s) 475
HpaI GTTAAC 1 cut(s) 127
Hpy166II GTNNAC 2 cut(s) 58, 127
Hpy188III TCNNGA 1 cut(s) 453
Hpy8I GTNNAC 2 cut(s) 58, 127
HpyAV CCTTC 4 cut(s) 359, 439, 450, 515
HpyCH4III ACNGT 1 cut(s) 124
HpyCH4V TGCA 5 cut(s) 4, 262, 289, 379, 618
HpyF10VI GCNNNNNNNGC 2 cut(s) 264, 716
HpyF3I CTNAG 3 cut(s) 209, 215, 359
Hsp92II CATG 5 cut(s) 88, 175, 262, 506, 670
KspAI GTTAAC 1 cut(s) 127
LmnI GCTCC 2 cut(s) 247, 715
LpnPI CCDG 3 cut(s) 268, 392, 649
MaeI CTAG 3 cut(s) 327, 453, 542
MboII GAAGA 1 cut(s) 593
MluCI AATT 7 cut(s) 117, 150, 181, 292, 402, 426, 551
MmeI TCCRAC 1 cut(s) 555
MnlI CCTC 5 cut(s) 198, 307, 621, 640, 701
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 4 cut(s) 32, 110, 126, 401
MslI CAYNNNNRTG 3 cut(s) 74, 252, 329
MwoI GCNNNNNNNGC 2 cut(s) 264, 716
NlaIII CATG 5 cut(s) 88, 175, 262, 506, 670
NlaIV GGNNCC 1 cut(s) 539
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 262
NspV TTCGAA 1 cut(s) 443
OliI CACNNNNGTG 1 cut(s) 329
PaeI GCATGC 1 cut(s) 262
PfeI GAWTC 1 cut(s) 475
PkrI GCNGC 1 cut(s) 323
PpuMI RGGWCCY 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 726
PspN4I GGNNCC 1 cut(s) 539
PspPI GGNCC 2 cut(s) 491, 726
PspPPI RGGWCCY 1 cut(s) 726
RsaI GTAC 1 cut(s) 96
RsaNI GTAC 1 cut(s) 95
RseI CAYNNNNRTG 3 cut(s) 74, 252, 329
SaqAI TTAA 4 cut(s) 32, 110, 126, 401
SatI GCNGC 1 cut(s) 322
Sau96I GGNCC 2 cut(s) 491, 726
SetI ASST 9 cut(s) 38, 287, 450, 487, 539, 559, 575, 585, 731
SfuI TTCGAA 1 cut(s) 443
SinI GGWCC 1 cut(s) 726
SmiMI CAYNNNNRTG 3 cut(s) 74, 252, 329
SphI GCATGC 1 cut(s) 262
Sse9I AATT 7 cut(s) 117, 150, 181, 292, 402, 426, 551
SsiI CCGC 1 cut(s) 321
SspMI CTAG 3 cut(s) 327, 453, 542
StyI CCWWGG 3 cut(s) 98, 273, 494
TaaI ACNGT 1 cut(s) 124
TaqI TCGA 1 cut(s) 443
TasI AATT 7 cut(s) 117, 150, 181, 292, 402, 426, 551
TauI GCSGC 1 cut(s) 324
TfiI GAWTC 1 cut(s) 475
Tru1I TTAA 4 cut(s) 32, 110, 126, 401
Tru9I TTAA 4 cut(s) 32, 110, 126, 401
TspDTI ATGAA 4 cut(s) 92, 143, 219, 354
VpaK11BI GGWCC 1 cut(s) 726
XapI RAATTY 1 cut(s) 181
XbaI TCTAGA 1 cut(s) 452
XceI RCATGY 1 cut(s) 262
XspI CTAG 3 cut(s) 327, 453, 542
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.