pycom12661g00120

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012661
Physical Location & Seq
Forward (+)
84959 .. 85773
815 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12661g00120.1

Sequence Viewer

Length: 534 bp
ATGGAATACACATTTAAACCAAATTCTCTTTCTCAATCATTAAGTTCTATGAAAATCATAAGCATTGACAAGGCATTCATCACTATGAAACACATGAGACTCTTACCGAGGATTTACTTAACACGATTGCGACTAGCAACCTCCACTACTTGTGAATATAATCATGCATGCAAATTAAGTGTCGACCCCCAACCCACATATGATAGGAGCATATTTAGGCGACTTAGTTGGCTTTTTAAGCCATTTTCGTGTGTTTTTAGGTTCCCATGGCTAAGGAAGCAAAAAGGTGCATTTTGGAGCAAAATTGGAGTTGGAATGGATAGCTTATGCTTGGAGATTCCTAATCACAAGAGGATTCCTAATCAAATGAGGAATCCTAGTCAAAGAAGATTCCATGTTTCAGCAACATTAAGGACTTCTATCTATTCTAGGACACAAAACAAATGTTTCCCTCCTTGCCGTGCAAGGGATAACCTTCTTTCCTATTCTAAAGCATTAAAACACATTCCTTTTTCATATCAAACTCAGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

178

Amino Acids

20.89

Weight (kDa)

10.45

Isoelectric Point (pI)

47.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 183
AcsI RAATTY 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 466
AjuI GAANNNNNNNTTGG 2 cut(s) 13, 45
AluBI AGCT 1 cut(s) 324
AluI AGCT 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 91
ApoI RAATTY 1 cut(s) 22
ArsI GACNNNNNNTTYG 2 cut(s) 165, 197
BceAI ACGGC 1 cut(s) 444
BcoDI GTCTC 1 cut(s) 91
BfaI CTAG 3 cut(s) 134, 378, 429
BmiI GGNNCC 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 107, 266
Bsc4I CCNNNNNNNGG 1 cut(s) 466
BseDI CCNNGG 2 cut(s) 107, 266
BseLI CCNNNNNNNGG 1 cut(s) 466
BslI CCNNNNNNNGG 1 cut(s) 466
BsmAI GTCTC 1 cut(s) 91
BsmI GAATGC 1 cut(s) 74
Bsp19I CCATGG 1 cut(s) 266
BspLI GGNNCC 1 cut(s) 263
BssECI CCNNGG 2 cut(s) 107, 266
BssT1I CCWWGG 1 cut(s) 266
BstC8I GCNNGC 1 cut(s) 169
BstDEI CTNAG 3 cut(s) 224, 272, 525
BstDSI CCRYGG 1 cut(s) 266
BstMAI GTCTC 1 cut(s) 91
BstMWI GCNNNNNNNGC 2 cut(s) 238, 277
BstNSI RCATGY 1 cut(s) 171
BtgI CCRYGG 1 cut(s) 266
Cac8I GCNNGC 1 cut(s) 169
CviAII CATG 5 cut(s) 94, 164, 168, 267, 395
CviJI RGCY 5 cut(s) 232, 241, 271, 324, 529
CviKI_1 RGCY 5 cut(s) 232, 241, 271, 324, 529
DdeI CTNAG 3 cut(s) 224, 272, 525
DraI TTTAAA 1 cut(s) 16
Eco130I CCWWGG 1 cut(s) 266
EcoT14I CCWWGG 1 cut(s) 266
EcoT22I ATGCAT 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 266
FaeI CATG 5 cut(s) 97, 167, 171, 270, 398
FatI CATG 5 cut(s) 93, 163, 167, 266, 394
FauNDI CATATG 1 cut(s) 199
FblI GTMKAC 1 cut(s) 183
FspBI CTAG 3 cut(s) 134, 378, 429
Hin1II CATG 5 cut(s) 97, 167, 171, 270, 398
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HinfI GANTC 5 cut(s) 99, 337, 355, 373, 390
Hpy166II GTNNAC 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 184
HpyAV CCTTC 1 cut(s) 485
HpyCH4V TGCA 4 cut(s) 167, 171, 290, 464
HpyF10VI GCNNNNNNNGC 2 cut(s) 238, 277
HpyF3I CTNAG 3 cut(s) 224, 272, 525
Hsp92II CATG 5 cut(s) 97, 167, 171, 270, 398
LmnI GCTCC 2 cut(s) 207, 297
MaeI CTAG 3 cut(s) 134, 378, 429
MboII GAAGA 1 cut(s) 399
MluCI AATT 3 cut(s) 22, 173, 303
MlyI GAGTC 1 cut(s) 93
MmeI TCCRAC 1 cut(s) 292
MnlI CCTC 5 cut(s) 102, 151, 345, 363, 462
Mph1103I ATGCAT 1 cut(s) 169
MseI TTAA 7 cut(s) 15, 41, 119, 176, 237, 410, 497
MslI CAYNNNNRTG 2 cut(s) 83, 247
Mva1269I GAATGC 1 cut(s) 74
MwoI GCNNNNNNNGC 2 cut(s) 238, 277
NcoI CCATGG 1 cut(s) 266
NdeI CATATG 1 cut(s) 199
NlaIII CATG 5 cut(s) 97, 167, 171, 270, 398
NlaIV GGNNCC 1 cut(s) 263
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PctI GAATGC 1 cut(s) 74
PfeI GAWTC 4 cut(s) 337, 355, 373, 390
PleI GAGTC 1 cut(s) 93
PpsI GAGTC 1 cut(s) 93
PspN4I GGNNCC 1 cut(s) 263
RseI CAYNNNNRTG 2 cut(s) 83, 247
SalI GTCGAC 1 cut(s) 182
SaqAI TTAA 7 cut(s) 15, 41, 119, 176, 237, 410, 497
SchI GAGTC 1 cut(s) 93
SetI ASST 5 cut(s) 143, 263, 289, 326, 477
SmiMI CAYNNNNRTG 2 cut(s) 83, 247
SphI GCATGC 1 cut(s) 171
Sse9I AATT 3 cut(s) 22, 173, 303
SspMI CTAG 3 cut(s) 134, 378, 429
StyI CCWWGG 1 cut(s) 266
TaqI TCGA 1 cut(s) 183
TasI AATT 3 cut(s) 22, 173, 303
TfiI GAWTC 4 cut(s) 337, 355, 373, 390
Tru1I TTAA 7 cut(s) 15, 41, 119, 176, 237, 410, 497
Tru9I TTAA 7 cut(s) 15, 41, 119, 176, 237, 410, 497
TspDTI ATGAA 4 cut(s) 65, 67, 101, 504
XapI RAATTY 1 cut(s) 22
XceI RCATGY 1 cut(s) 171
XmiI GTMKAC 1 cut(s) 183
XspI CTAG 3 cut(s) 134, 378, 429
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.