Rroxscaffold_6G00429160

Protein of unknown function (DUF1517)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000368
Physical Location & Seq
Reverse (-)
49504250 .. 49511279
7030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00429160.1

Sequence Viewer

Length: 1449 bp
ATGGCTACATCTGCGTTGCTCGGAGCCAACTCCTTGATCTCATTGAAGCAAACCTCCCCAATCCCCTTCTCCCGTCTTCGTTCTCTCCCCACCAAGCCACTCCAGTTCACCTACTTCACCACAGCCACCTTGAAAACGCAACCCTTATCTTCTTCTTCTCCCAAATATGATCTGAAACTCAAATGCTCCTCGGAGAAGAATCACTTCACATCAGACGATGCCTCTCAGGCAGAAGTCAACCCAACTCAAGACCCACTTGAGACCATCGCCAATGAAATATTATCGAATGTTCTCAAGGGACTGAAAACACCTGCAGTAGAGAACCCACCATTTGATGCTATCTTCAATGAAACATTCTCGAACGCTCTCAAGGGACTCAAAACACCTGCAAAAGAGAATCCTAACCCACTTGAGGCTATCTTCAATGAAACATTAGCGAGAGCTCTCAAGGTACTCAAGACACCTGCCATGGCTGCCGTGTTGTTGAGTTTGTTATTGACGTTTAACCCGAACTGCTCGTGGGCCGCCTCGGGTGGTCGGGTCGGGGGAAGCTCGTTCTCCTCACGCTCTTCGTCGTCATCCTCGTCATGGTCGTCGTCTTATTCTTCTTCATCATCGTCCTATAGATCTTCAAGTTCTTCACCTTCGTATTCGTACACGTCGTATTCGTCATATTCAACGCCTTCATCATCGAGTTCTTCGTCTACTACCTCGATGTCCGAGGTCTCAACGTCTTCCAATTTGGATTCGTCTGAAGCGTCAGCGGAGGATGAGGATAAATTCTTCTGTTGTTTTTTTATCCTTCTGCTTTTTTTTCTTGGTTTTTTTGCCTCCCTTATACCAAAAAAAAAAAAACATAACTTGCATTGCCAGAGTAGAATTTTTAATAAAACTAGTCATTTTGCACTCTCTTTCCAGGTTGGCCTCTTGGGCACATCAAGAGGACTCCAAAAGGATCTTGATCGAATTACTGAAACTGCAGATACATCTACCCCTGAGGGTTTACACTATGTTTTGAGGGAGGCAAAAATAGCTTTGCTTCGAAATTCTGATTATTGGATATCAACTTATTTATCTGTGACTCCACGTGAAAACATAGCGGATGCAGAGAAATGCTTCAATAAAATTTCAGTTGAAGAGAGGGCCAAATTTGATGAAGAAACTCTTGTTAATGTGAACAACAAAAAGAAGAAAAGCCCAACGAGCAAGAAAGACAACAAATTCCAAAATGAATATATAGTGGTTACACTATTGGTCGCTACTGAAGGCGAGCATATGTTGCCCACCATGAATGGCAGTGCTGAGTTACAGGCAGCATTGCAAAGCCTCAAATGCATATCCTCAAAGAATATAATAGCAACTGAAGTGTTATGGACTGCACAGCAAGAAAATGACGTGCTATTGGAGCAGGAACTACTTGAAGATTACCCACTTCTGAAGCGCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1517

Protein Analysis

482

Amino Acids

52.95

Weight (kDa)

7.55

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1517 PF07466 304 - 481 5.5e-59 Protein of unknown function (DUF1517)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000368)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54520
fragaria_vesca FvH4_4g09430 FvH4_5g29750 FvH4_6g03490 FvH4_6g03500 FvH4_6g03510 FvH4_6g03510 FvH4_6g03510 FvH4_6g03520 FvH4_6g03530 FvH4_6g03530 FvH4_6g03530
malus_domestica MD04G1220400.v1.1 MD12G1236800.v1.1
prunus_persica Prupe.6G339400_v2.0.a1 Prupe.6G339400_v2.0.a1
pyrus_communis pycom04g19510 pycom12g21790
rosa_chinensis RchiOBHm_Chr3g0451981 RchiOBHm_Chr3g0451991 RchiOBHm_Chr3g0452001 RchiOBHm_Chr3g0452011 RchiOBHm_Chr3g0452041 RchiOBHm_Chr3g0452111 RchiOBHm_Chr3g0452121
rosa_laevigata RLG00000009056 RLG00000025627 RLG00000025628 RLG00000025630 RLG00000025631 RLG00000025632 RLG00000035582
rosa_multiflora Rmu_co8213316.1_g000001 Rmu_co8226081.1_g000001 Rmu_co8290691.1_g000001 Rmu_sc0001358.1_g000002 Rmu_sc0001358.1_g000004 Rmu_sc0001358.1_g000008 Rmu_sc0001358.1_g000011 Rmu_sc0001448.1_g000001 Rmu_sc0001448.1_g000005 Rmu_sc0001448.1_g000009 Rmu_sc0001729.1_g000006 Rmu_sc0001729.1_g000012 Rmu_sc0001729.1_g000017
rosa_roxburghii Rroxscaffold_164G00436060 Rroxscaffold_164G00436070 Rroxscaffold_164G00436100 Rroxscaffold_164G00436110 Rroxscaffold_164G00436120 Rroxscaffold_164G00436130 Rroxscaffold_4G00296230 Rroxscaffold_6G00389530 Rroxscaffold_6G00429160 Rroxscaffold_6G00429170 Rroxscaffold_6G00429200 Rroxscaffold_6G00429220 Rroxscaffold_6G00429240
rosa_rugosa Rorug01G0052400 Rorug01G0052500 Rorug02G0637900 Rorug02G0637900 Rorug02G0638000 Rorug02G0638100 Rorug02G0638100 Rorug02G0638100 Rorug02G0638100 Rorug02G0638200 Rorug02G0638300 Rorug02G0638400 Rorug04G0037400
rosa_samantha Rh2DG349300 Rh3AG039600 Rh3AG039700 Rh3AG039800 Rh3AG039900 Rh3AG040200 Rh3AG040300 Rh3BG041100 Rh3BG041200 Rh3BG041300 Rh3BG041500 Rh3BG041700 Rh3BG041800 Rh3CG039500 Rh3CG039600 Rh3CG039700 Rh3CG039800 Rh3CG040000 Rh3CG040200 Rh3DG040200 Rh3DG040400 Rh3DG040500 Rh3DG041000 Rh3DG041100 Rh4BG107500 Rh6BG085400 Rh6DG400800
rosa_wichuraiana Rw0G023520 Rw3G002980 Rw3G002990 Rw3G003010 Rw3G003030 Rw3G003040 Rw3G003060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 319, 394, 472
Acc36I ACCTGC 3 cut(s) 319, 394, 472
AccI GTMKAC 1 cut(s) 704
AciI CCGC 3 cut(s) 525, 764, 1100
AclWI GGATC 1 cut(s) 963
AcsI RAATTY 6 cut(s) 779, 879, 1045, 1125, 1148, 1220
AcuI CTGAAG 3 cut(s) 774, 1284, 1383
AcvI CACGTG 1 cut(s) 1088
AfaI GTAC 2 cut(s) 453, 656
AfeI AGCGCT 1 cut(s) 1442
AfiI CCNNNNNNNGG 2 cut(s) 412, 588
AflIII ACRYGT 1 cut(s) 657
AgsI TTSAA 9 cut(s) 46, 133, 346, 424, 633, 678, 1120, 1136, 1421
AhlI ACTAGT 1 cut(s) 893
AjiI CACGTC 2 cut(s) 660, 1396
AjnI CCWGG 1 cut(s) 915
AluBI AGCT 3 cut(s) 443, 552, 1034
AluI AGCT 3 cut(s) 443, 552, 1034
Alw21I GWGCWC 1 cut(s) 445
Alw26I GTCTC 2 cut(s) 254, 730
AlwI GGATC 1 cut(s) 963
Ama87I CYCGRG 1 cut(s) 529
Aor51HI AGCGCT 1 cut(s) 1442
AoxI GGCC 3 cut(s) 522, 922, 1143
ApeKI GCWGC 2 cut(s) 473, 1313
ApoI RAATTY 6 cut(s) 779, 879, 1045, 1125, 1148, 1220
Asp700I GAANNNNTTC 2 cut(s) 203, 1115
AspLEI GCGC 1 cut(s) 1443
AspS9I GGNCC 2 cut(s) 522, 1143
AsuHPI GGTGA 3 cut(s) 100, 109, 633
AsuII TTCGAA 1 cut(s) 1042
AvaI CYCGRG 1 cut(s) 529
AxyI CCTNAGG 1 cut(s) 996
BaeGI GKGCMC 1 cut(s) 935
BanII GRGCYC 1 cut(s) 445
BauI CACGAG 1 cut(s) 517
BbrPI CACGTG 1 cut(s) 1088
BbsI GAAGAC 2 cut(s) 68, 726
Bbv12I GWGCWC 1 cut(s) 445
BbvI GCAGC 2 cut(s) 460, 1325
BccI CCATC 1 cut(s) 272
BceAI ACGGC 1 cut(s) 461
BciT130I CCWGG 1 cut(s) 917
BcoDI GTCTC 2 cut(s) 254, 730
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 1 cut(s) 894
BfmI CTRYAG 3 cut(s) 312, 622, 978
BfoI RGCGCY 1 cut(s) 1444
BfuAI ACCTGC 3 cut(s) 319, 394, 472
BglI GCCNNNNNGGC 2 cut(s) 227, 930
BglII AGATCT 1 cut(s) 626
BisI GCNGC 3 cut(s) 474, 525, 1314
BlsI GCNGC 3 cut(s) 475, 526, 1315
Bme1390I CCNGG 1 cut(s) 917
BmeT110I CYCGRG 1 cut(s) 529
BmgBI CACGTC 2 cut(s) 660, 1396
BmgT120I GGNCC 2 cut(s) 522, 1143
BmiI GGNNCC 1 cut(s) 25
BmrFI CCNGG 1 cut(s) 917
BmsI GCATC 3 cut(s) 208, 325, 1093
BpiI GAAGAC 2 cut(s) 68, 726
BpmI CTGGAG 1 cut(s) 86
Bpu14I TTCGAA 1 cut(s) 1042
BpuEI CTTGAG 7 cut(s) 231, 278, 278, 353, 431, 431, 440
BsaAI YACGTR 1 cut(s) 1088
BsaBI GATNNNNATC 1 cut(s) 960
BsaI GGTCTC 2 cut(s) 254, 730
BsaJI CCNNGG 4 cut(s) 189, 468, 528, 720
Bsc4I CCNNNNNNNGG 2 cut(s) 412, 588
Bse1I ACTGG 1 cut(s) 103
Bse21I CCTNAGG 1 cut(s) 996
Bse3DI GCAATG 2 cut(s) 865, 1316
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 1 cut(s) 917
BseDI CCNNGG 4 cut(s) 189, 468, 528, 720
BseGI GGATG 3 cut(s) 578, 775, 1108
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 2 cut(s) 412, 588
BseMI GCAATG 2 cut(s) 865, 1316
BseMII CTCAG 3 cut(s) 239, 987, 1293
BseNI ACTGG 1 cut(s) 103
BseRI GAGGAG 2 cut(s) 178, 550
BseSI GKGCMC 1 cut(s) 935
BseXI GCAGC 2 cut(s) 460, 1325
BsgI GTGCAG 1 cut(s) 1362
BshFI GGCC 3 cut(s) 524, 924, 1145
BsiHKAI GWGCWC 1 cut(s) 445
BsiHKCI CYCGRG 1 cut(s) 529
BslFI GGGAC 2 cut(s) 312, 387
BslI CCNNNNNNNGG 2 cut(s) 412, 588
BsmAI GTCTC 2 cut(s) 254, 730
BsmFI GGGAC 2 cut(s) 312, 387
BsnI GGCC 3 cut(s) 524, 924, 1145
Bso31I GGTCTC 2 cut(s) 254, 730
BsoBI CYCGRG 1 cut(s) 529
Bsp119I TTCGAA 1 cut(s) 1042
Bsp1286I GDGCHC 2 cut(s) 445, 935
Bsp143I GATC 5 cut(s) 36, 169, 626, 955, 961
Bsp19I CCATGG 1 cut(s) 468
BspACI CCGC 3 cut(s) 525, 764, 1100
BspANI GGCC 3 cut(s) 524, 924, 1145
BspCNI CTCAG 3 cut(s) 238, 988, 1294
BspLI GGNNCC 1 cut(s) 25
BspMAI CTGCAG 2 cut(s) 316, 982
BspMI ACCTGC 3 cut(s) 319, 394, 472
BspPI GGATC 1 cut(s) 963
BspQI GCTCTTC 1 cut(s) 574
BspT104I TTCGAA 1 cut(s) 1042
BspTNI GGTCTC 2 cut(s) 254, 730
BsrDI GCAATG 2 cut(s) 865, 1316
BsrI ACTGG 1 cut(s) 103
BssECI CCNNGG 4 cut(s) 189, 468, 528, 720
BssMI GATC 5 cut(s) 36, 169, 626, 955, 961
BssSI CACGAG 1 cut(s) 517
BssT1I CCWWGG 1 cut(s) 468
Bst2BI CACGAG 1 cut(s) 517
Bst2UI CCWGG 1 cut(s) 917
Bst6I CTCTTC 2 cut(s) 574, 1131
BstAPI GCANNNNNTGC 1 cut(s) 1279
BstBAI YACGTR 1 cut(s) 1088
BstBI TTCGAA 1 cut(s) 1042
BstC8I GCNNGC 1 cut(s) 1271
BstDEI CTNAG 3 cut(s) 225, 996, 1302
BstDSI CCRYGG 1 cut(s) 468
BstF5I GGATG 3 cut(s) 578, 775, 1108
BstH2I RGCGCY 1 cut(s) 1444
BstHHI GCGC 1 cut(s) 1443
BstKTI GATC 5 cut(s) 39, 172, 629, 958, 964
BstMAI GTCTC 2 cut(s) 254, 730
BstMBI GATC 5 cut(s) 36, 169, 626, 955, 961
BstMWI GCNNNNNNNGC 9 cut(s) 11, 227, 473, 930, 1031, 1203, 1279, 1332, 1405
BstNI CCWGG 1 cut(s) 917
BstSCI CCNGG 1 cut(s) 915
BstSFI CTRYAG 3 cut(s) 312, 622, 978
BstSLI GKGCMC 1 cut(s) 935
BstV1I GCAGC 2 cut(s) 460, 1325
BstV2I GAAGAC 2 cut(s) 68, 726
BstX2I RGATCY 2 cut(s) 626, 955
BstYI RGATCY 2 cut(s) 626, 955
Bsu36I CCTNAGG 1 cut(s) 996
BsuRI GGCC 3 cut(s) 524, 924, 1145
BtgI CCRYGG 1 cut(s) 468
BtgZI GCGATG 1 cut(s) 250
BtrI CACGTC 2 cut(s) 660, 1396
BtsCI GGATG 3 cut(s) 578, 775, 1108
BtsI GCAGTG 1 cut(s) 1303
BtsIMutI CAGTG 1 cut(s) 1303
BveI ACCTGC 3 cut(s) 319, 394, 472
Cac8I GCNNGC 1 cut(s) 1271
CfoI GCGC 1 cut(s) 1443
Cfr13I GGNCC 2 cut(s) 522, 1143
CseI GACGC 1 cut(s) 747
Csp6I GTAC 2 cut(s) 452, 655
CviAII CATG 3 cut(s) 469, 588, 1288
CviQI GTAC 2 cut(s) 452, 655
DdeI CTNAG 3 cut(s) 225, 996, 1302
DpnI GATC 5 cut(s) 38, 171, 628, 957, 963
DpnII GATC 5 cut(s) 36, 169, 626, 955, 961
Eam1104I CTCTTC 2 cut(s) 574, 1131
EarI CTCTTC 2 cut(s) 574, 1131
Ecl136II GAGCTC 1 cut(s) 443
Eco130I CCWWGG 1 cut(s) 468
Eco24I GRGCYC 1 cut(s) 445
Eco31I GGTCTC 2 cut(s) 254, 730
Eco32I GATATC 1 cut(s) 1062
Eco47III AGCGCT 1 cut(s) 1442
Eco53kI GAGCTC 1 cut(s) 443
Eco57I CTGAAG 3 cut(s) 774, 1284, 1383
Eco72I CACGTG 1 cut(s) 1088
Eco81I CCTNAGG 1 cut(s) 996
Eco88I CYCGRG 1 cut(s) 529
EcoICRI GAGCTC 1 cut(s) 443
EcoRII CCWGG 1 cut(s) 915
EcoRV GATATC 1 cut(s) 1062
EcoT14I CCWWGG 1 cut(s) 468
EcoT22I ATGCAT 1 cut(s) 1337
EcoT38I GRGCYC 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 468
FaeI CATG 3 cut(s) 472, 591, 1291
FalI AAGNNNNNCTT 6 cut(s) 188, 220, 240, 272, 1149, 1181
FaqI GGGAC 2 cut(s) 312, 387
FatI CATG 3 cut(s) 468, 587, 1287
FauNDI CATATG 1 cut(s) 1275
FblI GTMKAC 1 cut(s) 704
Fnu4HI GCNGC 3 cut(s) 474, 525, 1314
FokI GGATG 3 cut(s) 565, 782, 1115
FriOI GRGCYC 1 cut(s) 445
Fsp4HI GCNGC 3 cut(s) 474, 525, 1314
FspBI CTAG 1 cut(s) 894
GlaI GCGC 1 cut(s) 1442
GluI GCNGC 3 cut(s) 474, 525, 1314
GsuI CTGGAG 1 cut(s) 86
HaeII RGCGCY 1 cut(s) 1444
HaeIII GGCC 3 cut(s) 524, 924, 1145
HgaI GACGC 1 cut(s) 747
HhaI GCGC 1 cut(s) 1443
Hin1II CATG 3 cut(s) 472, 591, 1291
Hin6I GCGC 1 cut(s) 1441
HinP1I GCGC 1 cut(s) 1441
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HinfI GANTC 6 cut(s) 199, 375, 397, 746, 945, 1081
HphI GGTGA 3 cut(s) 100, 109, 633
Hpy166II GTNNAC 6 cut(s) 108, 238, 657, 705, 1004, 1177
Hpy188I TCNGA 8 cut(s) 23, 174, 193, 214, 721, 754, 1051, 1437
Hpy188III TCNNGA 5 cut(s) 248, 358, 457, 939, 959
Hpy8I GTNNAC 6 cut(s) 108, 238, 657, 705, 1004, 1177
Hpy99I CGWCG 3 cut(s) 577, 598, 664
HpyAV CCTTC 5 cut(s) 76, 654, 693, 812, 1259
HpyCH4IV ACGT 5 cut(s) 500, 659, 731, 1087, 1395
HpyCH4V TGCA 9 cut(s) 314, 389, 865, 905, 980, 1106, 1321, 1335, 1379
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 227, 473, 930, 1031, 1203, 1279, 1332, 1405
HpyF3I CTNAG 3 cut(s) 225, 996, 1302
HpySE526I ACGT 5 cut(s) 500, 659, 731, 1087, 1395
Hsp92II CATG 3 cut(s) 472, 591, 1291
HspAI GCGC 1 cut(s) 1441
Kzo9I GATC 5 cut(s) 36, 169, 626, 955, 961
LguI GCTCTTC 1 cut(s) 574
LmnI GCTCC 3 cut(s) 23, 191, 1405
Lsp1109I GCAGC 2 cut(s) 460, 1325
LweI GCATC 3 cut(s) 208, 325, 1093
MaeI CTAG 1 cut(s) 894
MaeII ACGT 5 cut(s) 500, 659, 731, 1087, 1395
MaeIII GTNAC 3 cut(s) 1078, 1243, 1305
MalI GATC 5 cut(s) 38, 171, 628, 957, 963
MboI GATC 5 cut(s) 36, 169, 626, 955, 961
MflI RGATCY 2 cut(s) 626, 955
MhlI GDGCHC 2 cut(s) 445, 935
MluCI AATT 8 cut(s) 739, 779, 879, 966, 1045, 1125, 1148, 1220
MlyI GAGTC 3 cut(s) 369, 939, 1075
Mph1103I ATGCAT 1 cut(s) 1337
MroXI GAANNNNTTC 2 cut(s) 203, 1115
MseI TTAA 4 cut(s) 504, 885, 1170, 1447
MspA1I CMGCKG 1 cut(s) 764
MspR9I CCNGG 1 cut(s) 917
MvaI CCWGG 1 cut(s) 917
MwoI GCNNNNNNNGC 9 cut(s) 11, 227, 473, 930, 1031, 1203, 1279, 1332, 1405
NcoI CCATGG 1 cut(s) 468
NdeI CATATG 1 cut(s) 1275
NdeII GATC 5 cut(s) 36, 169, 626, 955, 961
NlaIII CATG 3 cut(s) 472, 591, 1291
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 1 cut(s) 1078
NsiI ATGCAT 1 cut(s) 1337
NspV TTCGAA 1 cut(s) 1042
PaqCI CACCTGC 3 cut(s) 319, 394, 472
PciSI GCTCTTC 1 cut(s) 574
PcsI WCGNNNNNNNCGW 7 cut(s) 506, 581, 590, 659, 665, 698, 755
PdmI GAANNNNTTC 2 cut(s) 203, 1115
PfeI GAWTC 3 cut(s) 199, 397, 746
PkrI GCNGC 3 cut(s) 475, 526, 1315
PleI GAGTC 3 cut(s) 369, 939, 1075
PmaCI CACGTG 1 cut(s) 1088
PmlI CACGTG 1 cut(s) 1088
PpsI GAGTC 3 cut(s) 369, 939, 1075
Ppu21I YACGTR 1 cut(s) 1088
Psp124BI GAGCTC 1 cut(s) 445
Psp6I CCWGG 1 cut(s) 915
PspCI CACGTG 1 cut(s) 1088
PspGI CCWGG 1 cut(s) 915
PspN4I GGNNCC 1 cut(s) 25
PspPI GGNCC 2 cut(s) 522, 1143
PstI CTGCAG 2 cut(s) 316, 982
PsuI RGATCY 2 cut(s) 626, 955
RsaI GTAC 2 cut(s) 453, 656
RsaNI GTAC 2 cut(s) 452, 655
SacI GAGCTC 1 cut(s) 445
SapI GCTCTTC 1 cut(s) 574
SaqAI TTAA 4 cut(s) 504, 885, 1170, 1447
SatI GCNGC 3 cut(s) 474, 525, 1314
Sau3AI GATC 5 cut(s) 36, 169, 626, 955, 961
Sau96I GGNCC 2 cut(s) 522, 1143
SchI GAGTC 3 cut(s) 369, 939, 1075
ScrFI CCNGG 1 cut(s) 917
SduI GDGCHC 2 cut(s) 445, 935
SfaNI GCATC 3 cut(s) 208, 325, 1093
SfcI CTRYAG 3 cut(s) 312, 622, 978
SfuI TTCGAA 1 cut(s) 1042
SmlI CTYRAG 7 cut(s) 246, 257, 293, 368, 410, 446, 455
SmoI CTYRAG 7 cut(s) 246, 257, 293, 368, 410, 446, 455
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 8 cut(s) 739, 779, 879, 966, 1045, 1125, 1148, 1220
SsiI CCGC 3 cut(s) 525, 764, 1100
SspI AATATT 1 cut(s) 279
SspMI CTAG 1 cut(s) 894
SstI GAGCTC 1 cut(s) 445
StyD4I CCNGG 1 cut(s) 915
StyI CCWWGG 1 cut(s) 468
TaiI ACGT 5 cut(s) 503, 662, 734, 1090, 1398
TaqI TCGA 6 cut(s) 284, 359, 692, 713, 964, 1042
TasI AATT 8 cut(s) 739, 779, 879, 966, 1045, 1125, 1148, 1220
TauI GCSGC 1 cut(s) 527
TfiI GAWTC 3 cut(s) 199, 397, 746
Tru1I TTAA 4 cut(s) 504, 885, 1170, 1447
Tru9I TTAA 4 cut(s) 504, 885, 1170, 1447
TscAI CASTG 1 cut(s) 1303
TseFI GTSAC 1 cut(s) 1078
TseI GCWGC 2 cut(s) 473, 1313
Tsp45I GTSAC 1 cut(s) 1078
TspDTI ATGAA 8 cut(s) 288, 363, 441, 600, 675, 1170, 1245, 1304
TspRI CASTG 1 cut(s) 1303
XapI RAATTY 6 cut(s) 779, 879, 1045, 1125, 1148, 1220
XmiI GTMKAC 1 cut(s) 704
XmnI GAANNNNTTC 2 cut(s) 203, 1115
XspI CTAG 1 cut(s) 894
Zsp2I ATGCAT 1 cut(s) 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.