Rorug02G0638100

Protein of unknown function (DUF1517)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000368
Physical Location & Seq
Reverse (-)
75101840 .. 75106891
5052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0638100.1

Sequence Viewer

Length: 2217 bp
ATGACAAAGACGAAGAGGAACAGGTACGCTGGAGGGGGAGGGTATAGCGGTGGTGTTTTTGACCCGGCGGGTGGATATGAGTGCTCGGGTAGCTCAGGAAGAATCGACACAGAAGTAACAGTCTCAGAGGGGTCGAGTGCTCCGAAAAGGAAGTGTATTAGTTTGAATTCTAATAATCGCGACAGTTTCAGAGTGCCCACGCAAGTTCTCCCCTTGTCAAGGATGTTGTCGTCAGAAAGGAAGGATTTGATGAACAGGTTGAGGACGGAGCTTGAACAGATTCAGGTACTTAAGAAGAGAGTTGAAACACATAGAAGCAATGGTGTTGCAGTGTCGTCTTCTAGTGATATCCTCAGCTGTAGCAATGGACCAAATGGGCTGCATGTGGAAAATTTGCAAAAGTCATCAGCTTTGTCTTCTGGACAGAGGAAAAAAGAGTATCCTGTGGCTAAGAAAGTGCATGAGTTGAATCCCGGCAATTCTGGTAGGTTCAAGTCGGTCAGTCAGGCTTCAAAACCTAGCACCGCAAGTGTAATGTTGATGAACCAATGTGAGAAGGTATTGCGACGGGTAATGACCCAAAAATGTGCACATCCATTTAATAAACCTGTTGATATAGTGGAGTTAAAGATTCCAGATTACTTTACTATTATCAAGCATCCAATGGATTTGGGTACAATAAAGAAAAAGCTAACTTCAGGATCTTATTCAAGCCCGTTGGAGTTTGCTGCTGATGTCAGGCTTACTTTTACCAATGCTATGACCTACAATCCACCAGACAATAATGTACATATATGGGCTGATGATCTTAGTAAATATTTTGAACTCTGGTGGAAACCCATTGAGAAGAAACTTCCAAAGGCGGATCCACCAGCTAAATCTGCTCCTCATGAAGACATGGAAACTGCCAAGCCAATCCTCCCCTCAAGAAAGAGGACAATCACTTCAACGCAACCCGAAGTAAAGTCTGAGCCTGCTAAGCGGGTAATGTCAATGGAGGAGAAGCACACTCTGACAAGAGATTTGGAGTCTTTGCCACCAGAAGAAATTCCTTCAAACATCATTGATTTCTTGAGAGAACATAGTTCAAATGGAAAGGAGAATCCAGAAGATGAGATTATGATTGACATCTATGCCCTCAGTGATGATACCTTGTTTGCACTTCGGAAACTCTTAGATGAGTATGTACAAGAGAAAGAAAAGAATCATGTGAGGGCAGAGCCTTGTTCAATGGAGCTTTTGAATGATTCAGGGTTGAGCAATTCATCCATGCAGCCATGTGAAGGGAATGACCTCGCTGAGGAGGATGTTAATATTGGTGGAAATGAGCCCCCTGTCACAAGCTATCCTCCTGTTGAGATAGAAAAGGATACAGGCCATAGAAGCAGTAAAAACATAAGCCCAAGCAGCTCCAATGAGTCAGATTCAAGCAGTTCCGAGAGTGAGAGTGATGATGATTCTAAGGCCTCAAGTCCAGTACTACAACCCTTCAGTTCTGAAACTCAAGCAGATGAAAAGACAACAGTTGGAAATCCCCTTGAAGGAACTCAGTCTGACAGTGGGTTGGATCAAGTTGAACAAACTTCCCAGCCAAAGCCAAGTTCAGTTGAATCAGATAGCCGTCAGGATGGGGACAGTGCTCCCACAGAGAGGCCAGTCTCCCCTGATAAGCAGCATAGAGCCGCTCTGTTGAAGCATCGTTTTGCTGATACCATTTTGAGAGCTCAAGAGAAAACCTTTATTCAGGGTGACAAAGGGGATCCTGAGAAATTGCGACGGCAGAGGGAGGAACTTGAACTGCAACAGAAGAAAGAAAAGGCCCGGTTGCAAGCAGAAGCCAAAGCTGCCGAGGAGGCTAGAAGAAAAAAAGAAGCAGAAGCTGTAGCCGAGGCTAAACGGAAGAGGGAGCTTGAGAGAGAAGCAGCAAGGCAGGCTTTGCTGCAGATGGAGAAGACTGTTGAAATCAATGACTCTCGGTTCCTTCAAGATCTGGAAATGCAAATGCTTACAGCTCCCATGGAGCAGTTACCAATTTCAGTAGATGAAACAAGCCCAGATCATTCAGAGGATGGTTTAGGTGGTTTCAACTTCCGGGGCAGTAACCCCTTGGAACAACTTGGCTTGTACATGAAAAAGGATCAGGATGATGAGGAAGAAGAAGCTGATCTTGTCGTTCCAAATCCTGTAGATGATATAGAGGAGGGAGAGATTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1517

Protein Analysis

738

Amino Acids

82.17

Weight (kDa)

5.18

Isoelectric Point (pI)

58.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 184 - 265 3.2e-22 Bromodomain
BET PF17035 329 - 393 9e-13 Bromodomain extra-terminal - transcription regulation
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000368)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54520
fragaria_vesca FvH4_4g09430 FvH4_5g29750 FvH4_6g03490 FvH4_6g03500 FvH4_6g03510 FvH4_6g03510 FvH4_6g03510 FvH4_6g03520 FvH4_6g03530 FvH4_6g03530 FvH4_6g03530
malus_domestica MD04G1220400.v1.1 MD12G1236800.v1.1
prunus_persica Prupe.6G339400_v2.0.a1 Prupe.6G339400_v2.0.a1
pyrus_communis pycom04g19510 pycom12g21790
rosa_chinensis RchiOBHm_Chr3g0451981 RchiOBHm_Chr3g0451991 RchiOBHm_Chr3g0452001 RchiOBHm_Chr3g0452011 RchiOBHm_Chr3g0452041 RchiOBHm_Chr3g0452111 RchiOBHm_Chr3g0452121
rosa_laevigata RLG00000009056 RLG00000025627 RLG00000025628 RLG00000025630 RLG00000025631 RLG00000025632 RLG00000035582
rosa_multiflora Rmu_co8213316.1_g000001 Rmu_co8226081.1_g000001 Rmu_co8290691.1_g000001 Rmu_sc0001358.1_g000002 Rmu_sc0001358.1_g000004 Rmu_sc0001358.1_g000008 Rmu_sc0001358.1_g000011 Rmu_sc0001448.1_g000001 Rmu_sc0001448.1_g000005 Rmu_sc0001448.1_g000009 Rmu_sc0001729.1_g000006 Rmu_sc0001729.1_g000012 Rmu_sc0001729.1_g000017
rosa_roxburghii Rroxscaffold_164G00436060 Rroxscaffold_164G00436070 Rroxscaffold_164G00436100 Rroxscaffold_164G00436110 Rroxscaffold_164G00436120 Rroxscaffold_164G00436130 Rroxscaffold_4G00296230 Rroxscaffold_6G00389530 Rroxscaffold_6G00429160 Rroxscaffold_6G00429170 Rroxscaffold_6G00429200 Rroxscaffold_6G00429220 Rroxscaffold_6G00429240
rosa_rugosa Rorug01G0052400 Rorug01G0052500 Rorug02G0637900 Rorug02G0637900 Rorug02G0638000 Rorug02G0638100 Rorug02G0638100 Rorug02G0638100 Rorug02G0638100 Rorug02G0638200 Rorug02G0638300 Rorug02G0638400 Rorug04G0037400
rosa_samantha Rh2DG349300 Rh3AG039600 Rh3AG039700 Rh3AG039800 Rh3AG039900 Rh3AG040200 Rh3AG040300 Rh3BG041100 Rh3BG041200 Rh3BG041300 Rh3BG041500 Rh3BG041700 Rh3BG041800 Rh3CG039500 Rh3CG039600 Rh3CG039700 Rh3CG039800 Rh3CG040000 Rh3CG040200 Rh3DG040200 Rh3DG040400 Rh3DG040500 Rh3DG041000 Rh3DG041100 Rh4BG107500 Rh6BG085400 Rh6DG400800
rosa_wichuraiana Rw0G023520 Rw3G002980 Rw3G002990 Rw3G003010 Rw3G003030 Rw3G003040 Rw3G003060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1685
AccII CGCG 1 cut(s) 180
AciI CCGC 6 cut(s) 48, 68, 525, 863, 982, 1683
AclWI GGATC 7 cut(s) 709, 860, 873, 1575, 1754, 1767, 2145
AcsI RAATTY 3 cut(s) 166, 391, 1047
AcuI CTGAAG 2 cut(s) 681, 1474
AfaI GTAC 7 cut(s) 26, 288, 676, 789, 1188, 1479, 2126
AfiI CCNNNNNNNGG 6 cut(s) 71, 219, 1283, 1300, 1541, 1650
AflII CTTAAG 1 cut(s) 290
AjuI GAANNNNNNNTTGG 2 cut(s) 1585, 1617
Alw21I GWGCWC 5 cut(s) 86, 142, 592, 1642, 1726
Alw26I GTCTC 2 cut(s) 127, 1663
Alw44I GTGCAC 1 cut(s) 588
AlwI GGATC 7 cut(s) 709, 860, 873, 1575, 1754, 1767, 2145
AlwNI CAGNNNCTG 1 cut(s) 1880
Ama87I CYCGRG 1 cut(s) 85
AoxI GGCC 4 cut(s) 1375, 1464, 1652, 1818
ApaLI GTGCAC 1 cut(s) 588
ApeKI GCWGC 8 cut(s) 379, 728, 1273, 1407, 1672, 1844, 1922, 1939
ApoI RAATTY 3 cut(s) 166, 391, 1047
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp700I GAANNNNTTC 2 cut(s) 279, 1047
AspS9I GGNCC 2 cut(s) 368, 1819
AsuC2I CCSGG 4 cut(s) 65, 474, 1822, 2093
AsuHPI GGTGA 1 cut(s) 1760
AvaI CYCGRG 1 cut(s) 85
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 2 cut(s) 198, 592
BamHI GGATCC 2 cut(s) 865, 1759
BanII GRGCYC 2 cut(s) 1332, 1726
BbsI GAAGAC 4 cut(s) 330, 408, 900, 1958
Bbv12I GWGCWC 5 cut(s) 86, 142, 592, 1642, 1726
BbvCI CCTCAGC 2 cut(s) 353, 1299
BbvI GCAGC 8 cut(s) 366, 715, 1285, 1419, 1684, 1831, 1926, 1934
BccI CCATC 3 cut(s) 1622, 1939, 2063
BceAI ACGGC 2 cut(s) 1605, 1793
BciVI GTATCC 2 cut(s) 450, 1363
BcnI CCSGG 4 cut(s) 65, 474, 1822, 2093
BcoDI GTCTC 2 cut(s) 127, 1663
BfaI CTAG 3 cut(s) 342, 519, 1857
BfmI CTRYAG 4 cut(s) 358, 1881, 1940, 2184
BfrI CTTAAG 1 cut(s) 290
BfuI GTATCC 2 cut(s) 450, 1363
BglI GCCNNNNNGGC 1 cut(s) 1853
BglII AGATCT 1 cut(s) 1987
BisI GCNGC 9 cut(s) 380, 729, 1274, 1408, 1673, 1683, 1845, 1923, 1940
BlpI GCTNAGC 1 cut(s) 978
BlsI GCNGC 9 cut(s) 381, 730, 1275, 1409, 1674, 1684, 1846, 1924, 1941
BmcAI AGTACT 1 cut(s) 1479
Bme1390I CCNGG 4 cut(s) 65, 474, 1822, 2093
Bme18I GGWCC 1 cut(s) 368
BmeT110I CYCGRG 1 cut(s) 85
BmgT120I GGNCC 2 cut(s) 368, 1819
BmiI GGNNCC 3 cut(s) 867, 1761, 1979
BmrFI CCNGG 4 cut(s) 65, 474, 1822, 2093
BmsI GCATC 2 cut(s) 667, 1705
BpiI GAAGAC 4 cut(s) 330, 408, 900, 1958
BpmI CTGGAG 1 cut(s) 51
Bpu10I CCTNAGC 3 cut(s) 94, 353, 1299
Bpu1102I GCTNAGC 1 cut(s) 978
BpuEI CTTGAG 6 cut(s) 910, 1093, 1453, 1488, 1710, 1931
BpuMI CCSGG 4 cut(s) 65, 474, 1822, 2093
BsaBI GATNNNNATC 1 cut(s) 1127
BsaJI CCNNGG 5 cut(s) 1848, 1887, 2016, 2092, 2106
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 219, 1283, 1300, 1541, 1650
Bse1I ACTGG 2 cut(s) 1475, 1655
Bse3DI GCAATG 2 cut(s) 325, 370
Bse8I GATNNNNATC 1 cut(s) 1127
BseDI CCNNGG 5 cut(s) 1848, 1887, 2016, 2092, 2106
BseGI GGATG 8 cut(s) 228, 592, 658, 1265, 1312, 1633, 2074, 2149
BseJI GATNNNNATC 1 cut(s) 1127
BseLI CCNNNNNNNGG 6 cut(s) 71, 219, 1283, 1300, 1541, 1650
BseMI GCAATG 2 cut(s) 325, 370
BseMII CTCAG 8 cut(s) 108, 138, 367, 960, 1153, 1290, 1562, 1755
BseNI ACTGG 2 cut(s) 1475, 1655
BseRI GAGGAG 5 cut(s) 876, 1013, 1316, 1865, 2213
BseSI GKGCMC 2 cut(s) 198, 592
BseXI GCAGC 8 cut(s) 366, 715, 1285, 1419, 1684, 1831, 1926, 1934
BseYI CCCAGC 1 cut(s) 1587
Bsh1236I CGCG 1 cut(s) 180
BshFI GGCC 4 cut(s) 1377, 1466, 1654, 1820
BsiHKAI GWGCWC 5 cut(s) 86, 142, 592, 1642, 1726
BsiHKCI CYCGRG 1 cut(s) 85
BsiSI CCGG 4 cut(s) 65, 474, 1822, 2092
BslFI GGGAC 1 cut(s) 1646
BslI CCNNNNNNNGG 6 cut(s) 71, 219, 1283, 1300, 1541, 1650
BsmAI GTCTC 2 cut(s) 127, 1663
BsmFI GGGAC 1 cut(s) 1646
BsnI GGCC 4 cut(s) 1377, 1466, 1654, 1820
BsoBI CYCGRG 1 cut(s) 85
Bsp1286I GDGCHC 7 cut(s) 86, 142, 198, 592, 1332, 1642, 1726
Bsp1407I TGTACA 3 cut(s) 787, 1186, 2124
Bsp143I GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
Bsp1720I GCTNAGC 1 cut(s) 978
Bsp19I CCATGG 1 cut(s) 2016
Bsp68I TCGCGA 1 cut(s) 180
BspACI CCGC 6 cut(s) 48, 68, 525, 863, 982, 1683
BspANI GGCC 4 cut(s) 1377, 1466, 1654, 1820
BspCNI CTCAG 8 cut(s) 107, 137, 366, 961, 1152, 1291, 1561, 1756
BspFNI CGCG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 3 cut(s) 867, 1761, 1979
BspMAI CTGCAG 1 cut(s) 1944
BspPI GGATC 7 cut(s) 709, 860, 873, 1575, 1754, 1767, 2145
BspTI CTTAAG 1 cut(s) 290
BsrBI CCGCTC 1 cut(s) 1685
BsrDI GCAATG 2 cut(s) 325, 370
BsrGI TGTACA 3 cut(s) 787, 1186, 2124
BsrI ACTGG 2 cut(s) 1475, 1655
BssECI CCNNGG 5 cut(s) 1848, 1887, 2016, 2092, 2106
BssMI GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
BssT1I CCWWGG 2 cut(s) 2016, 2106
Bst4CI ACNGT 6 cut(s) 121, 185, 1525, 1559, 1637, 1957
Bst6I CTCTTC 3 cut(s) 8, 290, 1895
BstAFI CTTAAG 1 cut(s) 290
BstAPI GCANNNNNTGC 1 cut(s) 1936
BstAUI TGTACA 3 cut(s) 787, 1186, 2124
BstC8I GCNNGC 3 cut(s) 975, 1830, 1932
BstDSI CCRYGG 1 cut(s) 2016
BstENI CCTNNNNNAGG 2 cut(s) 217, 1298
BstF5I GGATG 8 cut(s) 228, 592, 658, 1265, 1312, 1633, 2074, 2149
BstFNI CGCG 1 cut(s) 180
BstKTI GATC 9 cut(s) 704, 808, 868, 1570, 1762, 1990, 2059, 2140, 2167
BstMAI GTCTC 2 cut(s) 127, 1663
BstMBI GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
BstMWI GCNNNNNNNGC 9 cut(s) 90, 881, 979, 1383, 1407, 1844, 1853, 1931, 1936
BstNSI RCATGY 1 cut(s) 386
BstSCI CCNGG 4 cut(s) 63, 472, 1820, 2091
BstSFI CTRYAG 4 cut(s) 358, 1881, 1940, 2184
BstSLI GKGCMC 2 cut(s) 198, 592
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 8 cut(s) 366, 715, 1285, 1419, 1684, 1831, 1926, 1934
BstV2I GAAGAC 4 cut(s) 330, 408, 900, 1958
BstX2I RGATCY 4 cut(s) 701, 865, 1759, 1987
BstYI RGATCY 4 cut(s) 701, 865, 1759, 1987
BsuI GTATCC 2 cut(s) 450, 1363
BsuRI GGCC 4 cut(s) 1377, 1466, 1654, 1820
BtgI CCRYGG 1 cut(s) 2016
BtsCI GGATG 8 cut(s) 228, 592, 658, 1265, 1312, 1633, 2074, 2149
BtsI GCAGTG 1 cut(s) 336
BtsIMutI CAGTG 4 cut(s) 336, 1147, 1564, 1642
BtuMI TCGCGA 1 cut(s) 180
Cac8I GCNNGC 3 cut(s) 975, 1830, 1932
CaiI CAGNNNCTG 1 cut(s) 1880
CciI TCATGA 1 cut(s) 889
Cfr13I GGNCC 2 cut(s) 368, 1819
Csp6I GTAC 7 cut(s) 25, 287, 675, 788, 1187, 1478, 2125
CviAII CATG 9 cut(s) 383, 461, 890, 898, 1208, 1270, 1278, 2017, 2128
CviQI GTAC 7 cut(s) 25, 287, 675, 788, 1187, 1478, 2125
DpnI GATC 9 cut(s) 703, 807, 867, 1569, 1761, 1989, 2058, 2139, 2166
DpnII GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
Eam1104I CTCTTC 3 cut(s) 8, 290, 1895
EarI CTCTTC 3 cut(s) 8, 290, 1895
EciI GGCGGA 1 cut(s) 878
Ecl136II GAGCTC 1 cut(s) 1724
Eco130I CCWWGG 2 cut(s) 2016, 2106
Eco147I AGGCCT 1 cut(s) 1466
Eco24I GRGCYC 2 cut(s) 1332, 1726
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 368
Eco53kI GAGCTC 1 cut(s) 1724
Eco57I CTGAAG 2 cut(s) 681, 1474
Eco88I CYCGRG 1 cut(s) 85
EcoICRI GAGCTC 1 cut(s) 1724
EcoNI CCTNNNNNAGG 2 cut(s) 217, 1298
EcoRI GAATTC 1 cut(s) 166
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 2 cut(s) 2016, 2106
EcoT38I GRGCYC 2 cut(s) 1332, 1726
ErhI CCWWGG 2 cut(s) 2016, 2106
FaeI CATG 9 cut(s) 386, 464, 893, 901, 1211, 1273, 1281, 2020, 2131
FalI AAGNNNNNCTT 4 cut(s) 1918, 1950, 2151, 2183
FaqI GGGAC 1 cut(s) 1646
FatI CATG 9 cut(s) 382, 460, 889, 897, 1207, 1269, 1277, 2016, 2127
FauI CCCGC 2 cut(s) 61, 975
Fnu4HI GCNGC 9 cut(s) 380, 729, 1274, 1408, 1673, 1683, 1845, 1923, 1940
FokI GGATG 8 cut(s) 235, 579, 645, 1252, 1319, 1640, 2081, 2156
FriOI GRGCYC 2 cut(s) 1332, 1726
Fsp4HI GCNGC 9 cut(s) 380, 729, 1274, 1408, 1673, 1683, 1845, 1923, 1940
FspBI CTAG 3 cut(s) 342, 519, 1857
GluI GCNGC 9 cut(s) 380, 729, 1274, 1408, 1673, 1683, 1845, 1923, 1940
GsaI CCCAGC 1 cut(s) 1591
GsuI CTGGAG 1 cut(s) 51
HaeIII GGCC 4 cut(s) 1377, 1466, 1654, 1820
HapII CCGG 4 cut(s) 65, 474, 1822, 2092
Hin1II CATG 9 cut(s) 386, 464, 893, 901, 1211, 1273, 1281, 2020, 2131
HpaII CCGG 4 cut(s) 65, 474, 1822, 2092
HphI GGTGA 1 cut(s) 1760
Hpy166II GTNNAC 1 cut(s) 590
Hpy8I GTNNAC 1 cut(s) 590
Hpy99I CGWCG 2 cut(s) 570, 1779
HpyAV CCTTC 7 cut(s) 235, 550, 1062, 1277, 1498, 1535, 1991
HpyCH4III ACNGT 6 cut(s) 121, 185, 1525, 1559, 1637, 1957
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 881, 979, 1383, 1407, 1844, 1853, 1931, 1936
Hsp92II CATG 9 cut(s) 386, 464, 893, 901, 1211, 1273, 1281, 2020, 2131
Kzo9I GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
LmnI GCTCC 9 cut(s) 145, 268, 889, 1234, 1415, 1645, 1906, 2017, 2020
Lsp1109I GCAGC 8 cut(s) 366, 715, 1285, 1419, 1684, 1831, 1926, 1934
LweI GCATC 2 cut(s) 667, 1705
MaeI CTAG 3 cut(s) 342, 519, 1857
MaeIII GTNAC 5 cut(s) 115, 1336, 1748, 2025, 2099
MalI GATC 9 cut(s) 703, 807, 867, 1569, 1761, 1989, 2058, 2139, 2166
MbiI CCGCTC 1 cut(s) 1685
MboI GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
MflI RGATCY 4 cut(s) 701, 865, 1759, 1987
MhlI GDGCHC 7 cut(s) 86, 142, 198, 592, 1332, 1642, 1726
MluCI AATT 7 cut(s) 166, 391, 478, 1047, 1261, 1769, 2031
MlyI GAGTC 3 cut(s) 1037, 1427, 1964
MmeI TCCRAC 3 cut(s) 699, 1507, 1545
MroXI GAANNNNTTC 2 cut(s) 279, 1047
MseI TTAA 5 cut(s) 291, 600, 626, 1311, 2215
MspA1I CMGCKG 1 cut(s) 357
MspCI CTTAAG 1 cut(s) 290
MspI CCGG 4 cut(s) 65, 474, 1822, 2092
MspR9I CCNGG 4 cut(s) 65, 474, 1822, 2093
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 9 cut(s) 90, 881, 979, 1383, 1407, 1844, 1853, 1931, 1936
NciI CCSGG 4 cut(s) 65, 474, 1822, 2093
NcoI CCATGG 1 cut(s) 2016
NdeII GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
NlaIII CATG 9 cut(s) 386, 464, 893, 901, 1211, 1273, 1281, 2020, 2131
NlaIV GGNNCC 3 cut(s) 867, 1761, 1979
NmeAIII GCCGAG 2 cut(s) 1873, 1912
NmuCI GTSAC 2 cut(s) 1336, 1748
NruI TCGCGA 1 cut(s) 180
NspI RCATGY 1 cut(s) 386
PagI TCATGA 1 cut(s) 889
PceI AGGCCT 1 cut(s) 1466
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PdmI GAANNNNTTC 2 cut(s) 279, 1047
PkrI GCNGC 9 cut(s) 381, 730, 1275, 1409, 1674, 1684, 1846, 1924, 1941
PleI GAGTC 3 cut(s) 1036, 1426, 1964
PpsI GAGTC 3 cut(s) 1036, 1426, 1964
Psp124BI GAGCTC 1 cut(s) 1726
PspFI CCCAGC 1 cut(s) 1587
PspN4I GGNNCC 3 cut(s) 867, 1761, 1979
PspPI GGNCC 2 cut(s) 368, 1819
PstI CTGCAG 1 cut(s) 1944
PstNI CAGNNNCTG 1 cut(s) 1880
PsuI RGATCY 4 cut(s) 701, 865, 1759, 1987
PvuII CAGCTG 1 cut(s) 357
RruI TCGCGA 1 cut(s) 180
RsaI GTAC 7 cut(s) 26, 288, 676, 789, 1188, 1479, 2126
RsaNI GTAC 7 cut(s) 25, 287, 675, 788, 1187, 1478, 2125
SacI GAGCTC 1 cut(s) 1726
SaqAI TTAA 5 cut(s) 291, 600, 626, 1311, 2215
SatI GCNGC 9 cut(s) 380, 729, 1274, 1408, 1673, 1683, 1845, 1923, 1940
Sau3AI GATC 9 cut(s) 701, 805, 865, 1567, 1759, 1987, 2056, 2137, 2164
Sau96I GGNCC 2 cut(s) 368, 1819
ScaI AGTACT 1 cut(s) 1479
SchI GAGTC 3 cut(s) 1037, 1427, 1964
ScrFI CCNGG 4 cut(s) 65, 474, 1822, 2093
SduI GDGCHC 7 cut(s) 86, 142, 198, 592, 1332, 1642, 1726
SfaNI GCATC 2 cut(s) 667, 1705
SfcI CTRYAG 4 cut(s) 358, 1881, 1940, 2184
SinI GGWCC 1 cut(s) 368
SmlI CTYRAG 7 cut(s) 290, 925, 1072, 1468, 1503, 1725, 1910
SmoI CTYRAG 7 cut(s) 290, 925, 1072, 1468, 1503, 1725, 1910
Sse9I AATT 7 cut(s) 166, 391, 478, 1047, 1261, 1769, 2031
SseBI AGGCCT 1 cut(s) 1466
SsiI CCGC 6 cut(s) 48, 68, 525, 863, 982, 1683
SspI AATATT 2 cut(s) 818, 1315
SspMI CTAG 3 cut(s) 342, 519, 1857
SstI GAGCTC 1 cut(s) 1726
StuI AGGCCT 1 cut(s) 1466
StyD4I CCNGG 4 cut(s) 63, 472, 1820, 2091
StyI CCWWGG 2 cut(s) 2016, 2106
TaaI ACNGT 6 cut(s) 121, 185, 1525, 1559, 1637, 1957
TaqI TCGA 2 cut(s) 105, 134
TaqII GACCGA 1 cut(s) 487
TasI AATT 7 cut(s) 166, 391, 478, 1047, 1261, 1769, 2031
TatI WGTACW 4 cut(s) 787, 1186, 1477, 2124
TauI GCSGC 1 cut(s) 1685
Tru1I TTAA 5 cut(s) 291, 600, 626, 1311, 2215
Tru9I TTAA 5 cut(s) 291, 600, 626, 1311, 2215
TscAI CASTG 4 cut(s) 336, 1147, 1564, 1642
TseFI GTSAC 2 cut(s) 1336, 1748
TseI GCWGC 8 cut(s) 379, 728, 1273, 1407, 1672, 1844, 1922, 1939
Tsp45I GTSAC 2 cut(s) 1336, 1748
TspDTI ATGAA 7 cut(s) 266, 557, 906, 1254, 1527, 2058, 2144
TspGWI ACGGA 2 cut(s) 281, 1912
TspRI CASTG 4 cut(s) 336, 1147, 1564, 1642
Vha464I CTTAAG 1 cut(s) 290
VneI GTGCAC 1 cut(s) 588
VpaK11BI GGWCC 1 cut(s) 368
XagI CCTNNNNNAGG 2 cut(s) 217, 1298
XapI RAATTY 3 cut(s) 166, 391, 1047
XceI RCATGY 1 cut(s) 386
XmnI GAANNNNTTC 2 cut(s) 279, 1047
XspI CTAG 3 cut(s) 342, 519, 1857
ZrmI AGTACT 1 cut(s) 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.