Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000695

Physical Location & Seq

Genomic Coordinates Forward (+)

40282958 .. 40312010

Gene Structure 29053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0338900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGGAAGCCGAAAAGAGGAAGAGCGGAACGAGAAGATCATACGAGGTCTTATGAAGCTTCCTCCCAATCGAAGATGCATAAACTGTAACAGCCTGGGTCCTCAGTATGTGTGCATCAACTTTTGGACTTTTGTTTGCACGACTTGCAGTGGCATCCATCGTGAATTCACTCATCGCGTGAAGTCTGTATCTATGTCTAAGTTTACATCACAAGAAGTCGAGGCCCTTGAAAATGGTGGTAATCAGCGTGCAAGGGAAATATATTTGAAAGATTGGGACCTTCAAAGGCAGCGATTTCCAGACAGCAGTAAGGTTGATAAAATCCGTGAGTTCATAAGAAGTGTATATGTCGATAGAAAATATGCTGGAGGAAGAACCTTGGAAAAGCCTCCAAGAGATATGCAGAACCATAGAATCCGTGAAGATGAGACAAGACGTGCCAGTTCATATCATTCTTATTCTCAAAGTCCACCTTATGATTATCAGTATGAAGATCGACGGTATGGGAAGCAAGCTGCTGCACTTACCAGGAAGCCTGGTTCTGATCGAGGTCGATATGAAGGAAAGTTGTCTAGTTTTGGTTACAGTGCTGATCGTTTAAGTGAACAAATGTATGAGGACAGGTTTGCAAATGATGGCTCAAGAGTTTCAGATTACTCTGTGTCAAGTGGAGGTGATGCATTCAGATCTGGAGTACAGTCTCCTAATTTTCAGAAGGACATTGGATCTAGCAGTCCATCTTTCCAGCCTTCGCAGGATAATAGTGATGTAAGGTGCCAAGCAAAAAGTACAGTTTTGGAGGCAAATGTCAACAGAGATGCAGGGGTCATGCCATTTTCGCAGAGAACTTTATCCTCGGGAAGTTTTGGCTCAGTGGATAGCTATTCCATGTCTCTCAAGTCATTTAATTCAGGCGGTTTAACAGATGCTGTATCTGAACCCGAACAATATGCTGGAGCCGTCCAGGATAAACCAACTTCTTTATCATCTCTTTTTGGAACTTCCGATAGTTTGGATCTCTTCAAAGCCCCGGTTCAACCAGAAGAAATCTCTTCTGCTGCTTCATCTATTGATTTGTTTCAGTTACCAGCCGCATCTTCATCTCTTTCCATAGATTCATTTCAACCTTGTGTATTGTCTTCTGCTACGTCTTCGAATGTATACCAACCTCCTCAGACATCAACACCTTTGGATTTATTTGCTGATTTTCCTCAGCACCTGTCAACTTCCAAACAAGTGCAAGAATCTGTCCCTAAAAGTGAAGGATGGGCAACTTTTGATACACCTCAGCCCTCAGCTTCTATTTCAGGGACTGATAATATTATACCTGCAAATATAACTTCCAATGATGGAGCTTCTATTGGAAATTTTGATCTATTCTCGTCATCAAATACAGGCATGCAGTGGCCATCATTTGCGAATATTTCTAATCCATGGACTGATAATTTGCACGAATTTACAGCTCCAAATACCACAGCAAGTCCTCAGTCATGGAATGCTTTTGAAGATTCTGTTGGACACCTTCCTTTGGAGGGCACCAAGAAGAGTAGTGAATCAGTAGCAACAGACGAGCTTTTGTCAGCTGGTGACCAGTATTTGGGAGTCATAATTTCTGAGGACTCTAGTACAGATGGGATTCAGAGAGCTGCCTCCCAAGGTGAACCCCGTGATCCTGGTCTGCCATCACATGTCTTGGGGCCATCATATACTCCACAAGTGCTTCCTCATATGGGAGAAATTAATTCGCATGCCTCTGACTACAGATCAAATAACCCTTTTGATCTGCCTTACGATACAGATCTGGAGCAGACCAATATGTTTTTGGACATGAGCTCTTTACAAGCATCTCTGCCAAATGCTCAGTTGCAGTCCTCTTTTCTCAGTGGTGTATCTCAACCATGGTTTCCTGAGGGTGGCTTAACGTACTTGCCAGGGCAAGCACAGAGTACTCAAATACAGAAATCCAACTTTCCTCTCGAGCATTTACCTACTTGCAAGGAGTACCTTGATGACGATACTAGTATCGATACGTTGACAACTTCAACATGGAGCGTCATGTTTGGACAACTCCAACATGATTTGGGTACCCATATCAATTCCAACTCCAATATACTCCAAATCGGCATAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009787 GO:0009789 GO:0009873 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010118 GO:0010185 GO:0010186 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032870 GO:0035556 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0080090 GO:0080134 GO:0090332 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905959 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

710

Amino Acids

78.22

Weight (kDa)

4.99

Isoelectric Point (pI)

51.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArfGap	PF01412	12 - 122	4.3e-30	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000695)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr4g0405551
rosa_laevigata	RLG00000000512 RLG00000006283 RLG00000008110 RLG00000008280 RLG00000013435 RLG00000014038 RLG00000019487 RLG00000019783 RLG00000020425 RLG00000022555 RLG00000022693 RLG00000023047 RLG00000027683 RLG00000028941 RLG00000029255 RLG00000033981 RLG00000034375 RLG00000035055 RLG00000036983
rosa_multiflora	Rmu_sc0002070.1_g000038 Rmu_sc0002521.1_g000050 Rmu_sc0002986.1_g000060 Rmu_sc0003002.1_g000067 Rmu_sc0006244.1_g000030 Rmu_sc0009710.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002410 Rroxscaffold_1G00026380 Rroxscaffold_1G00026390 Rroxscaffold_1G00063340 Rroxscaffold_2G00089150 Rroxscaffold_2G00114500 Rroxscaffold_2G00155770 Rroxscaffold_3G00224480 Rroxscaffold_3G00243690 Rroxscaffold_3G00251260 Rroxscaffold_4G00298200 Rroxscaffold_4G00327440 Rroxscaffold_7G00192530
rosa_rugosa	Rorug01G0052300 Rorug01G0094500 Rorug03G0152700 Rorug03G0245200 Rorug03G0338800 Rorug03G0338900 Rorug04G0045100 Rorug04G0168400 Rorug04G0291600 Rorug07G0163300 Rorug07G0349700
rosa_samantha	Rh1AG146400 Rh1BG098400 Rh2CG327400 Rh3BG286300 Rh3BG323300 Rh4AG085300 Rh4AG137800 Rh4CG008600 Rh4CG032900 Rh4CG092500 Rh4CG180400 Rh4CG231200 Rh4CG274400 Rh4CG304800 Rh5AG384900 Rh5BG344700 Rh5CG355300 Rh6AG151000 Rh6BG302500 Rh6DG135900 Rh6DG138700 Rh6DG206300 Rh6DG319500 Rh7BG412300 Rh7CG476300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1336
Acc65I	GGTACC	1 cut(s)	2084
AccB1I	GGYRCC	3 cut(s)	774, 1535, 2084
AccB7I	CCANNNNNTGG	1 cut(s)	1597
AccBSI	CCGCTC	1 cut(s)	25
AccI	GTMKAC	1 cut(s)	1161
AccII	CGCG	1 cut(s)	177
AciI	CCGC	3 cut(s)	25, 915, 1092
AclWI	GGATC	3 cut(s)	733, 1023, 1664
AcoI	YGGCCR	1 cut(s)	1406
AcsI	RAATTY	3 cut(s)	164, 1366, 1454
AfaI	GTAC	7 cut(s)	696, 790, 1627, 1925, 1948, 2003, 2086
AfiI	CCNNNNNNNGG	6 cut(s)	16, 1528, 1532, 1597, 1730, 1913
AflIII	ACRYGT	1 cut(s)	1687
AgsI	TTSAA	8 cut(s)	230, 268, 284, 1024, 1037, 1124, 1505, 2043
AhlI	ACTAGT	1 cut(s)	2018
AjiI	CACGTC	1 cut(s)	437
AjnI	CCWGG	6 cut(s)	93, 527, 535, 963, 1672, 1930
AjuI	GAANNNNNNNTTGG	2 cut(s)	1497, 1529
AloI	GAACNNNNNNTCC	2 cut(s)	523, 555
Alw21I	GWGCWC	1 cut(s)	1835
Alw26I	GTCTC	3 cut(s)	422, 705, 897
AlwI	GGATC	3 cut(s)	733, 1023, 1664
AlwNI	CAGNNNCTG	3 cut(s)	929, 1219, 1313
Ama87I	CYCGRG	2 cut(s)	856, 1976
AoxI	GGCC	3 cut(s)	222, 1406, 1697
ApeKI	GCWGC	5 cut(s)	289, 515, 518, 1058, 1646
ApoI	RAATTY	3 cut(s)	164, 1366, 1454
ArsI	GACNNNNNNTTYG	2 cut(s)	1429, 1461
AseI	ATTAAT	1 cut(s)	1740
Asp718I	GGTACC	1 cut(s)	2084
AspS9I	GGNCC	4 cut(s)	98, 223, 277, 1697
AsuC2I	CCSGG	1 cut(s)	1031
AsuHPI	GGTGA	3 cut(s)	686, 1598, 1670
AsuII	TTCGAA	1 cut(s)	1154
AvaI	CYCGRG	2 cut(s)	856, 1976
AvaII	GGWCC	2 cut(s)	98, 277
AxyI	CCTNAGG	1 cut(s)	1908
BaeGI	GKGCMC	1 cut(s)	1538
BalI	TGGCCA	1 cut(s)	1408
BanI	GGYRCC	3 cut(s)	774, 1535, 2084
BanII	GRGCYC	1 cut(s)	1835
BbsI	GAAGAC	2 cut(s)	1131, 1143
Bbv12I	GWGCWC	1 cut(s)	1835
BbvCI	CCTCAGC	3 cut(s)	1212, 1287, 1294
BbvI	GCAGC	5 cut(s)	301, 502, 505, 1045, 1633
BccI	CCATC	9 cut(s)	165, 629, 745, 1260, 1343, 1417, 1625, 1690, 1708
BceAI	ACGGC	1 cut(s)	944
BcgI	CGANNNNNNTGC	2 cut(s)	932, 966
BciT130I	CCWGG	6 cut(s)	95, 529, 537, 965, 1674, 1932
BcnI	CCSGG	1 cut(s)	1031
BcoDI	GTCTC	3 cut(s)	422, 705, 897
BcuI	ACTAGT	1 cut(s)	2018
BfaI	CTAG	4 cut(s)	573, 729, 1623, 2019
BfmI	CTRYAG	1 cut(s)	1759
BfuAI	ACCTGC	1 cut(s)	1336
BglII	AGATCT	2 cut(s)	686, 1798
BisI	GCNGC	6 cut(s)	290, 516, 519, 1059, 1092, 1647
BlsI	GCNGC	6 cut(s)	291, 517, 520, 1060, 1093, 1648
BmcAI	AGTACT	1 cut(s)	1948
Bme1390I	CCNGG	7 cut(s)	95, 529, 537, 965, 1031, 1674, 1932
Bme18I	GGWCC	2 cut(s)	98, 277
BmeT110I	CYCGRG	2 cut(s)	856, 1976
BmgBI	CACGTC	1 cut(s)	437
BmgT120I	GGNCC	4 cut(s)	98, 223, 277, 1697
BmiI	GGNNCC	7 cut(s)	99, 278, 776, 958, 1537, 1698, 2086
BmrFI	CCNGG	7 cut(s)	95, 529, 537, 965, 1031, 1674, 1932
BmsI	GCATC	8 cut(s)	65, 123, 162, 667, 808, 916, 1103, 1853
BpiI	GAAGAC	2 cut(s)	1131, 1143
BpmI	CTGGAG	4 cut(s)	387, 711, 975, 1823
Bpu10I	CCTNAGC	3 cut(s)	1212, 1287, 1294
Bpu14I	TTCGAA	1 cut(s)	1154
BpuEI	CTTGAG	2 cut(s)	625, 881
BpuMI	CCSGG	1 cut(s)	1031
Bsa29I	ATCGAT	1 cut(s)	2025
BsaBI	GATNNNNATC	1 cut(s)	1797
BsaJI	CCNNGG	8 cut(s)	94, 378, 855, 1029, 1433, 1654, 1898, 1931
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 1528, 1532, 1597, 1730, 1913
Bse1I	ACTGG	2 cut(s)	441, 1591
Bse21I	CCTNAGG	1 cut(s)	1908
Bse8I	GATNNNNATC	1 cut(s)	1797
BseBI	CCWGG	6 cut(s)	95, 529, 537, 965, 1674, 1932
BseCI	ATCGAT	1 cut(s)	2025
BseDI	CCNNGG	8 cut(s)	94, 378, 855, 1029, 1433, 1654, 1898, 1931
BseGI	GGATG	2 cut(s)	153, 1271
BseJI	GATNNNNATC	1 cut(s)	1797
BseLI	CCNNNNNNNGG	6 cut(s)	16, 1528, 1532, 1597, 1730, 1913
BseNI	ACTGG	2 cut(s)	441, 1591
BseRI	GAGGAG	1 cut(s)	1161
BseSI	GKGCMC	1 cut(s)	1538
BseXI	GCAGC	5 cut(s)	301, 502, 505, 1045, 1633
BsgI	GTGCAG	1 cut(s)	504
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	3 cut(s)	224, 1408, 1699
BshNI	GGYRCC	3 cut(s)	774, 1535, 2084
BshVI	ATCGAT	1 cut(s)	2025
BsiHKAI	GWGCWC	1 cut(s)	1835
BsiHKCI	CYCGRG	2 cut(s)	856, 1976
BsiSI	CCGG	1 cut(s)	1031
BslFI	GGGAC	3 cut(s)	290, 1235, 1324
BslI	CCNNNNNNNGG	6 cut(s)	16, 1528, 1532, 1597, 1730, 1913
BsmAI	GTCTC	3 cut(s)	422, 705, 897
BsmFI	GGGAC	3 cut(s)	290, 1235, 1324
BsmI	GAATGC	2 cut(s)	680, 1501
BsnI	GGCC	3 cut(s)	224, 1408, 1699
BsoBI	CYCGRG	2 cut(s)	856, 1976
Bsp119I	TTCGAA	1 cut(s)	1154
Bsp1286I	GDGCHC	2 cut(s)	1538, 1835
Bsp19I	CCATGG	2 cut(s)	1433, 1898
BspACI	CCGC	3 cut(s)	25, 915, 1092
BspANI	GGCC	3 cut(s)	224, 1408, 1699
BspDI	ATCGAT	1 cut(s)	2025
BspFNI	CGCG	1 cut(s)	177
BspLI	GGNNCC	7 cut(s)	99, 278, 776, 958, 1537, 1698, 2086
BspMI	ACCTGC	1 cut(s)	1336
BspPI	GGATC	3 cut(s)	733, 1023, 1664
BspQI	GCTCTTC	1 cut(s)	15
BspT104I	TTCGAA	1 cut(s)	1154
BspT107I	GGYRCC	3 cut(s)	774, 1535, 2084
BsrBI	CCGCTC	1 cut(s)	25
BsrI	ACTGG	2 cut(s)	441, 1591
BssECI	CCNNGG	8 cut(s)	94, 378, 855, 1029, 1433, 1654, 1898, 1931
BssNAI	GTATAC	1 cut(s)	1162
BssT1I	CCWWGG	4 cut(s)	378, 1433, 1654, 1898
Bst1107I	GTATAC	1 cut(s)	1162
Bst2UI	CCWGG	6 cut(s)	95, 529, 537, 965, 1674, 1932
Bst4CI	ACNGT	5 cut(s)	86, 501, 587, 699, 793
Bst6I	CTCTTC	4 cut(s)	15, 1025, 1057, 1538
BstAPI	GCANNNNNTGC	1 cut(s)	144
BstBI	TTCGAA	1 cut(s)	1154
BstC8I	GCNNGC	5 cut(s)	249, 513, 1400, 1749, 1938
BstDSI	CCRYGG	2 cut(s)	1433, 1898
BstEII	GGTNACC	1 cut(s)	1586
BstF5I	GGATG	2 cut(s)	153, 1271
BstFNI	CGCG	1 cut(s)	177
BstMAI	GTCTC	3 cut(s)	422, 705, 897
BstMWI	GCNNNNNNNGC	2 cut(s)	144, 838
BstNI	CCWGG	6 cut(s)	95, 529, 537, 965, 1674, 1932
BstNSI	RCATGY	3 cut(s)	1402, 1691, 1751
BstPI	GGTNACC	1 cut(s)	1586
BstSCI	CCNGG	7 cut(s)	93, 527, 535, 963, 1029, 1672, 1930
BstSFI	CTRYAG	1 cut(s)	1759
BstSLI	GKGCMC	1 cut(s)	1538
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	5 cut(s)	301, 502, 505, 1045, 1633
BstV2I	GAAGAC	2 cut(s)	1131, 1143
BstX2I	RGATCY	4 cut(s)	686, 725, 1015, 1798
BstYI	RGATCY	4 cut(s)	686, 725, 1015, 1798
BstZ17I	GTATAC	1 cut(s)	1162
Bsu15I	ATCGAT	1 cut(s)	2025
Bsu36I	CCTNAGG	1 cut(s)	1908
BsuRI	GGCC	3 cut(s)	224, 1408, 1699
BsuTUI	ATCGAT	1 cut(s)	2025
BtgI	CCRYGG	2 cut(s)	1433, 1898
BtgZI	GCGATG	1 cut(s)	158
BtrI	CACGTC	1 cut(s)	437
BtsCI	GGATG	2 cut(s)	153, 1271
BtsI	GCAGTG	2 cut(s)	154, 1409
BtsIMutI	CAGTG	5 cut(s)	154, 592, 879, 1409, 1888
BveI	ACCTGC	1 cut(s)	1336
Cac8I	GCNNGC	5 cut(s)	249, 513, 1400, 1749, 1938
CaiI	CAGNNNCTG	3 cut(s)	929, 1219, 1313
Cfr13I	GGNCC	4 cut(s)	98, 223, 277, 1697
ClaI	ATCGAT	1 cut(s)	2025
CseI	GACGC	1 cut(s)	2041
Csp6I	GTAC	7 cut(s)	695, 789, 1626, 1924, 1947, 2002, 2085
CviQI	GTAC	7 cut(s)	695, 789, 1626, 1924, 1947, 2002, 2085
EaeI	YGGCCR	1 cut(s)	1406
Eam1104I	CTCTTC	4 cut(s)	15, 1025, 1057, 1538
EarI	CTCTTC	4 cut(s)	15, 1025, 1057, 1538
Ecl136II	GAGCTC	1 cut(s)	1833
Eco130I	CCWWGG	4 cut(s)	378, 1433, 1654, 1898
Eco24I	GRGCYC	1 cut(s)	1835
Eco47I	GGWCC	2 cut(s)	98, 277
Eco53kI	GAGCTC	1 cut(s)	1833
Eco81I	CCTNAGG	1 cut(s)	1908
Eco88I	CYCGRG	2 cut(s)	856, 1976
Eco91I	GGTNACC	1 cut(s)	1586
EcoICRI	GAGCTC	1 cut(s)	1833
EcoO109I	RGGNCCY	3 cut(s)	98, 223, 277
EcoO65I	GGTNACC	1 cut(s)	1586
EcoRI	GAATTC	1 cut(s)	164
EcoRII	CCWGG	6 cut(s)	93, 527, 535, 963, 1672, 1930
EcoT14I	CCWWGG	4 cut(s)	378, 1433, 1654, 1898
EcoT22I	ATGCAT	2 cut(s)	80, 682
EcoT38I	GRGCYC	1 cut(s)	1835
ErhI	CCWWGG	4 cut(s)	378, 1433, 1654, 1898
FalI	AAGNNNNNCTT	2 cut(s)	457, 489
FaqI	GGGAC	3 cut(s)	290, 1235, 1324
FauNDI	CATATG	1 cut(s)	1728
FblI	GTMKAC	1 cut(s)	1161
Fnu4HI	GCNGC	6 cut(s)	290, 516, 519, 1059, 1092, 1647
FokI	GGATG	2 cut(s)	140, 1278
FriOI	GRGCYC	1 cut(s)	1835
Fsp4HI	GCNGC	6 cut(s)	290, 516, 519, 1059, 1092, 1647
FspBI	CTAG	4 cut(s)	573, 729, 1623, 2019
GluI	GCNGC	6 cut(s)	290, 516, 519, 1059, 1092, 1647
GsuI	CTGGAG	4 cut(s)	387, 711, 975, 1823
HaeIII	GGCC	3 cut(s)	224, 1408, 1699
HapII	CCGG	1 cut(s)	1031
HgaI	GACGC	1 cut(s)	2041
HincII	GTYRAC	3 cut(s)	811, 1224, 2034
HindII	GTYRAC	3 cut(s)	811, 1224, 2034
HindIII	AAGCTT	1 cut(s)	56
HinfI	GANTC	8 cut(s)	414, 1115, 1244, 1508, 1553, 1602, 1619, 1636
HpaII	CCGG	1 cut(s)	1031
HphI	GGTGA	3 cut(s)	686, 1598, 1670
Hpy166II	GTNNAC	8 cut(s)	204, 470, 605, 811, 1162, 1224, 1661, 2034
Hpy188III	TCNNGA	8 cut(s)	161, 299, 642, 690, 858, 1802, 1907, 1976
Hpy8I	GTNNAC	8 cut(s)	204, 470, 605, 811, 1162, 1224, 1661, 2034
Hpy99I	CGWCG	1 cut(s)	501
HpyAV	CCTTC	6 cut(s)	290, 554, 709, 759, 1256, 1532
HpyCH4III	ACNGT	5 cut(s)	86, 501, 587, 699, 793
HpyCH4IV	ACGT	4 cut(s)	436, 1148, 1922, 2030
HpyF10VI	GCNNNNNNNGC	2 cut(s)	144, 838
HpySE526I	ACGT	4 cut(s)	436, 1148, 1922, 2030
KpnI	GGTACC	1 cut(s)	2088
LguI	GCTCTTC	1 cut(s)	15
LmnI	GCTCC	5 cut(s)	956, 1352, 1468, 1804, 2049
Lsp1109I	GCAGC	5 cut(s)	301, 502, 505, 1045, 1633
LweI	GCATC	8 cut(s)	65, 123, 162, 667, 808, 916, 1103, 1853
MaeI	CTAG	4 cut(s)	573, 729, 1623, 2019
MaeII	ACGT	4 cut(s)	436, 1148, 1922, 2030
MaeIII	GTNAC	4 cut(s)	86, 581, 1083, 1586
MbiI	CCGCTC	1 cut(s)	25
MflI	RGATCY	4 cut(s)	686, 725, 1015, 1798
MhlI	GDGCHC	2 cut(s)	1538, 1835
MlsI	TGGCCA	1 cut(s)	1408
MluNI	TGGCCA	1 cut(s)	1408
MlyI	GAGTC	2 cut(s)	1611, 1613
MmeI	TCCRAC	4 cut(s)	1495, 1989, 2095, 2124
Mox20I	TGGCCA	1 cut(s)	1408
Mph1103I	ATGCAT	2 cut(s)	80, 682
MscI	TGGCCA	1 cut(s)	1408
MseI	TTAA	5 cut(s)	599, 906, 920, 1740, 1919
Msp20I	TGGCCA	1 cut(s)	1408
MspA1I	CMGCKG	1 cut(s)	1583
MspI	CCGG	1 cut(s)	1031
MspR9I	CCNGG	7 cut(s)	95, 529, 537, 965, 1031, 1674, 1932
Mva1269I	GAATGC	2 cut(s)	680, 1501
MvaI	CCWGG	6 cut(s)	95, 529, 537, 965, 1674, 1932
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	2 cut(s)	144, 838
NciI	CCSGG	1 cut(s)	1031
NcoI	CCATGG	2 cut(s)	1433, 1898
NdeI	CATATG	1 cut(s)	1728
NlaIV	GGNNCC	7 cut(s)	99, 278, 776, 958, 1537, 1698, 2086
NmuCI	GTSAC	1 cut(s)	1586
NsiI	ATGCAT	2 cut(s)	80, 682
NspI	RCATGY	3 cut(s)	1402, 1691, 1751
NspV	TTCGAA	1 cut(s)	1154
PaeI	GCATGC	2 cut(s)	1402, 1751
PaeR7I	CTCGAG	1 cut(s)	1976
PciI	ACATGT	1 cut(s)	1687
PciSI	GCTCTTC	1 cut(s)	15
PctI	GAATGC	2 cut(s)	680, 1501
PfeI	GAWTC	6 cut(s)	414, 1115, 1244, 1508, 1553, 1636
PflMI	CCANNNNNTGG	1 cut(s)	1597
PfoI	TCCNGGA	1 cut(s)	963
PkrI	GCNGC	6 cut(s)	291, 517, 520, 1060, 1093, 1648
PleI	GAGTC	2 cut(s)	1610, 1613
PpsI	GAGTC	2 cut(s)	1610, 1613
PpuMI	RGGWCCY	2 cut(s)	98, 277
PscI	ACATGT	1 cut(s)	1687
PshBI	ATTAAT	1 cut(s)	1740
Psp124BI	GAGCTC	1 cut(s)	1835
Psp5II	RGGWCCY	2 cut(s)	98, 277
Psp6I	CCWGG	6 cut(s)	93, 527, 535, 963, 1672, 1930
PspEI	GGTNACC	1 cut(s)	1586
PspGI	CCWGG	6 cut(s)	93, 527, 535, 963, 1672, 1930
PspN4I	GGNNCC	7 cut(s)	99, 278, 776, 958, 1537, 1698, 2086
PspPI	GGNCC	4 cut(s)	98, 223, 277, 1697
PspPPI	RGGWCCY	2 cut(s)	98, 277
PstNI	CAGNNNCTG	3 cut(s)	929, 1219, 1313
PsuI	RGATCY	4 cut(s)	686, 725, 1015, 1798
PvuII	CAGCTG	1 cut(s)	1583
RsaI	GTAC	7 cut(s)	696, 790, 1627, 1925, 1948, 2003, 2086
RsaNI	GTAC	7 cut(s)	695, 789, 1626, 1924, 1947, 2002, 2085
SacI	GAGCTC	1 cut(s)	1835
SapI	GCTCTTC	1 cut(s)	15
SaqAI	TTAA	5 cut(s)	599, 906, 920, 1740, 1919
SatI	GCNGC	6 cut(s)	290, 516, 519, 1059, 1092, 1647
Sau96I	GGNCC	4 cut(s)	98, 223, 277, 1697
ScaI	AGTACT	1 cut(s)	1948
SchI	GAGTC	2 cut(s)	1611, 1613
ScrFI	CCNGG	7 cut(s)	95, 529, 537, 965, 1031, 1674, 1932
SduI	GDGCHC	2 cut(s)	1538, 1835
SfaNI	GCATC	8 cut(s)	65, 123, 162, 667, 808, 916, 1103, 1853
SfcI	CTRYAG	1 cut(s)	1759
Sfr274I	CTCGAG	1 cut(s)	1976
SfuI	TTCGAA	1 cut(s)	1154
SinI	GGWCC	2 cut(s)	98, 277
SlaI	CTCGAG	1 cut(s)	1976
SmlI	CTYRAG	3 cut(s)	640, 896, 1976
SmoI	CTYRAG	3 cut(s)	640, 896, 1976
SpeI	ACTAGT	1 cut(s)	2018
SphI	GCATGC	2 cut(s)	1402, 1751
SsiI	CCGC	3 cut(s)	25, 915, 1092
SspI	AATATT	2 cut(s)	1321, 1423
SspMI	CTAG	4 cut(s)	573, 729, 1623, 2019
SstI	GAGCTC	1 cut(s)	1835
StyD4I	CCNGG	7 cut(s)	93, 527, 535, 963, 1029, 1672, 1930
StyI	CCWWGG	4 cut(s)	378, 1433, 1654, 1898
TaaI	ACNGT	5 cut(s)	86, 501, 587, 699, 793
TaiI	ACGT	4 cut(s)	439, 1151, 1925, 2033
TaqI	TCGA	9 cut(s)	70, 219, 351, 496, 547, 553, 1154, 1977, 2025
TatI	WGTACW	4 cut(s)	694, 788, 1625, 1946
TauI	GCSGC	1 cut(s)	1094
TfiI	GAWTC	6 cut(s)	414, 1115, 1244, 1508, 1553, 1636
Tru1I	TTAA	5 cut(s)	599, 906, 920, 1740, 1919
Tru9I	TTAA	5 cut(s)	599, 906, 920, 1740, 1919
TscAI	CASTG	5 cut(s)	154, 592, 879, 1409, 1888
TseFI	GTSAC	1 cut(s)	1586
TseI	GCWGC	5 cut(s)	289, 515, 518, 1058, 1646
Tsp45I	GTSAC	1 cut(s)	1586
TspDTI	ATGAA	8 cut(s)	68, 322, 435, 504, 573, 1053, 1089, 1107
TspGWI	ACGGA	2 cut(s)	314, 407
TspRI	CASTG	5 cut(s)	154, 592, 879, 1409, 1888
Van91I	CCANNNNNTGG	1 cut(s)	1597
VpaK11BI	GGWCC	2 cut(s)	98, 277
VspI	ATTAAT	1 cut(s)	1740
XapI	RAATTY	3 cut(s)	164, 1366, 1454
XceI	RCATGY	3 cut(s)	1402, 1691, 1751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1819
XhoI	CTCGAG	1 cut(s)	1976
XmiI	GTMKAC	1 cut(s)	1161
XspI	CTAG	4 cut(s)	573, 729, 1623, 2019
ZrmI	AGTACT	1 cut(s)	1948
Zsp2I	ATGCAT	2 cut(s)	80, 682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.