Rh6AG151000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
23692338 .. 23693183
846 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG151000.1

Sequence Viewer

Length: 330 bp
ATGGATGACATTGTGAAGGAAGTGGAAGAAGATAAGGTTGTACAGGTTCCGGTGGAAGAACCAGCTGCTGCAATAGTTCATGAGAAGGCTGTTGAGTTGGTTGAAGTTACACAACAGAAACAACCAAATAAGTCCAGTAAGGGTTTGAAGAAAAGGAAAAGGCAAGTAGGCATTCCTGAAGAGGAGAATATTGACATGAAGAAGCTACCAAAAGATTACCCTGCACCTTTGAAGTGCTTGTGGATTTGGGCAAGGTACAATTTGGCAAATGGGAGGACAATCTCCTTCAATTTGGAACAGAAAGTGTTTGGCATCGACATGAAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

109

Amino Acids

12.55

Weight (kDa)

7.81

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 198
AfaI GTAC 2 cut(s) 42, 257
AgsI TTSAA 4 cut(s) 104, 148, 232, 289
AluBI AGCT 2 cut(s) 65, 205
AluI AGCT 2 cut(s) 65, 205
AlwNI CAGNNNCTG 1 cut(s) 68
ApeKI GCWGC 2 cut(s) 65, 68
BbvI GCAGC 2 cut(s) 52, 55
BisI GCNGC 2 cut(s) 66, 69
BlsI GCNGC 2 cut(s) 67, 70
BmiI GGNNCC 1 cut(s) 48
BmsI GCATC 1 cut(s) 321
BsaWI WCCGGW 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 135
BseGI GGATG 1 cut(s) 10
BseNI ACTGG 1 cut(s) 135
BseRI GAGGAG 1 cut(s) 197
BseXI GCAGC 2 cut(s) 52, 55
BsgI GTGCAG 1 cut(s) 207
BsiSI CCGG 1 cut(s) 50
BsmI GAATGC 1 cut(s) 171
Bsp1407I TGTACA 1 cut(s) 40
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 1 cut(s) 48
BsrGI TGTACA 1 cut(s) 40
BsrI ACTGG 1 cut(s) 135
Bst6I CTCTTC 1 cut(s) 174
BstAUI TGTACA 1 cut(s) 40
BstF5I GGATG 1 cut(s) 10
BstV1I GCAGC 2 cut(s) 52, 55
BtsCI GGATG 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 1 cut(s) 79
Csp6I GTAC 2 cut(s) 41, 256
CviAII CATG 3 cut(s) 80, 196, 319
CviJI RGCY 3 cut(s) 65, 89, 205
CviKI_1 RGCY 3 cut(s) 65, 89, 205
CviQI GTAC 2 cut(s) 41, 256
Eam1104I CTCTTC 1 cut(s) 174
EarI CTCTTC 1 cut(s) 174
Eco57I CTGAAG 1 cut(s) 198
FaeI CATG 3 cut(s) 83, 199, 322
FaiI YATR 3 cut(s) 81, 197, 320
FatI CATG 3 cut(s) 79, 195, 318
Fnu4HI GCNGC 2 cut(s) 66, 69
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 2 cut(s) 66, 69
GluI GCNGC 2 cut(s) 66, 69
HapII CCGG 1 cut(s) 50
Hin1II CATG 3 cut(s) 83, 199, 322
HpaII CCGG 1 cut(s) 50
Hpy188III TCNNGA 2 cut(s) 80, 176
HpyAV CCTTC 3 cut(s) 10, 79, 295
HpyCH4V TGCA 2 cut(s) 71, 224
Hsp92II CATG 3 cut(s) 83, 199, 322
LpnPI CCDG 6 cut(s) 29, 63, 75, 148, 189, 234
Lsp1109I GCAGC 2 cut(s) 52, 55
LweI GCATC 1 cut(s) 321
MaeIII GTNAC 1 cut(s) 106
MboII GAAGA 6 cut(s) 38, 41, 68, 160, 191, 211
MluCI AATT 2 cut(s) 259, 289
MnlI CCTC 2 cut(s) 175, 267
MslI CAYNNNNRTG 1 cut(s) 317
MspA1I CMGCKG 1 cut(s) 65
MspI CCGG 1 cut(s) 50
Mva1269I GAATGC 1 cut(s) 171
NlaIII CATG 3 cut(s) 83, 199, 322
NlaIV GGNNCC 1 cut(s) 48
PagI TCATGA 1 cut(s) 79
PctI GAATGC 1 cut(s) 171
PkrI GCNGC 2 cut(s) 67, 70
PspN4I GGNNCC 1 cut(s) 48
PstNI CAGNNNCTG 1 cut(s) 68
PvuII CAGCTG 1 cut(s) 65
RsaI GTAC 2 cut(s) 42, 257
RsaNI GTAC 2 cut(s) 41, 256
RseI CAYNNNNRTG 1 cut(s) 317
SatI GCNGC 2 cut(s) 66, 69
SetI ASST 6 cut(s) 39, 48, 67, 207, 229, 257
SfaNI GCATC 1 cut(s) 321
SmiMI CAYNNNNRTG 1 cut(s) 317
Sse9I AATT 2 cut(s) 259, 289
SspI AATATT 1 cut(s) 190
TaqI TCGA 1 cut(s) 315
TasI AATT 2 cut(s) 259, 289
TatI WGTACW 1 cut(s) 40
TseI GCWGC 2 cut(s) 65, 68
TspDTI ATGAA 2 cut(s) 68, 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.