Rh3BG286300

source UniProtKB

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
28535636 .. 28551373
15738 bp
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UTR
Exon/CDS
Intron
Rh3BG286300.1

Sequence Viewer

Length: 366 bp
ATGCACAGGATTAAACAGCAAAATAAGTCCAGTAAGGGTTTAAAAAAGAGGAAAAGGCAAGTAGATAATCCTGAAGAGGAGTATATTGACATGAAGAATCTACCAAAAGATTACCCTGCACCTTTGAAGTGCTTATGGATTTGGGCGAGAGACAATATGGCAAATGGGAAGACAATCTCCTTCAAGTTGGAAGAGAAAGTGTTTGGCATCGAAAGGAAGCAATATCTGTTTAAGTCAGACATTCATGCATTCTGTATGATGACTGAACTATCAGGTGGTGTAATCTGCATGTATATATGCTCAGTCAGAACCCATTCCACTATTGTTGCCGTAGTGTCAGTTCCACCCACCACGGTATCCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.96

Weight (kDa)

9.38

Isoelectric Point (pI)

56.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 93
AgsI TTSAA 2 cut(s) 127, 184
Alw26I GTCTC 1 cut(s) 144
Asp700I GAANNNNTTC 1 cut(s) 313
BaeI ACNNNNGTAYC 1 cut(s) 339
BbsI GAAGAC 1 cut(s) 176
BceAI ACGGC 1 cut(s) 314
BcoDI GTCTC 1 cut(s) 144
BmsI GCATC 1 cut(s) 216
BpiI GAAGAC 1 cut(s) 176
BsaJI CCNNGG 1 cut(s) 351
Bse1I ACTGG 1 cut(s) 30
BseDI CCNNGG 1 cut(s) 351
BseMII CTCAG 1 cut(s) 315
BseNI ACTGG 1 cut(s) 30
BseRI GAGGAG 1 cut(s) 92
BsgI GTGCAG 1 cut(s) 102
BsmAI GTCTC 1 cut(s) 144
BsmI GAATGC 1 cut(s) 248
BspCNI CTCAG 1 cut(s) 314
BsrI ACTGG 1 cut(s) 30
BssECI CCNNGG 1 cut(s) 351
Bst4CI ACNGT 1 cut(s) 355
Bst6I CTCTTC 2 cut(s) 69, 186
BstDEI CTNAG 1 cut(s) 301
BstDSI CCRYGG 1 cut(s) 351
BstMAI GTCTC 1 cut(s) 144
BstNSI RCATGY 1 cut(s) 292
BstV2I GAAGAC 1 cut(s) 176
BtgI CCRYGG 1 cut(s) 351
CspCI CAANNNNNGTGG 2 cut(s) 307, 342
CviAII CATG 3 cut(s) 91, 245, 289
DdeI CTNAG 1 cut(s) 301
DraI TTTAAA 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 69, 186
EarI CTCTTC 2 cut(s) 69, 186
Eco57I CTGAAG 1 cut(s) 93
EcoT22I ATGCAT 1 cut(s) 250
FaeI CATG 3 cut(s) 94, 248, 292
FatI CATG 3 cut(s) 90, 244, 288
Hin1II CATG 3 cut(s) 94, 248, 292
HinfI GANTC 1 cut(s) 97
Hpy188I TCNGA 2 cut(s) 238, 308
Hpy188III TCNNGA 1 cut(s) 71
HpyAV CCTTC 1 cut(s) 190
HpyCH4III ACNGT 1 cut(s) 355
HpyCH4V TGCA 4 cut(s) 4, 119, 248, 288
HpyF3I CTNAG 1 cut(s) 301
Hsp92II CATG 3 cut(s) 94, 248, 292
LpnPI CCDG 4 cut(s) 43, 84, 129, 258
LweI GCATC 1 cut(s) 216
MboII GAAGA 4 cut(s) 86, 106, 181, 203
MmeI TCCRAC 1 cut(s) 168
MnlI CCTC 2 cut(s) 42, 70
Mph1103I ATGCAT 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 313
MseI TTAA 4 cut(s) 12, 41, 231, 364
Mva1269I GAATGC 1 cut(s) 248
NlaIII CATG 3 cut(s) 94, 248, 292
NsiI ATGCAT 1 cut(s) 250
NspI RCATGY 1 cut(s) 292
PctI GAATGC 1 cut(s) 248
PdmI GAANNNNTTC 1 cut(s) 313
PfeI GAWTC 1 cut(s) 97
PsrI GAACNNNNNNTAC 2 cut(s) 324, 356
SaqAI TTAA 4 cut(s) 12, 41, 231, 364
SetI ASST 2 cut(s) 124, 277
SfaNI GCATC 1 cut(s) 216
TaaI ACNGT 1 cut(s) 355
TaqI TCGA 1 cut(s) 210
TfiI GAWTC 1 cut(s) 97
Tru1I TTAA 4 cut(s) 12, 41, 231, 364
Tru9I TTAA 4 cut(s) 12, 41, 231, 364
TspDTI ATGAA 2 cut(s) 107, 233
XceI RCATGY 1 cut(s) 292
XmnI GAANNNNTTC 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.