Rorug04G0083300

Mitochondrial inner membrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000328
Physical Location & Seq
Forward (+)
12662160 .. 12663907
1748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0083300.1

Sequence Viewer

Length: 1395 bp
ATGAGCCACAAAGTTGCTAGTACTAGTCCTCGAAATGTTGCAGTCTTAGTTTTTCCATTCACCTCCCATCCCACCGCTCTTCTTCGATTTGTACGTTCCCTTTCAACTGTTGCCCCGGATATGCAGTTCACCTTCTTCAACATTTCTAGATCAAATAGCTCCCTCTTCTCAGGTTCCGGCAACAAGGGCTGTGATAATATAAAGCCTTACAACGTATGGGATGGCTTACCAGATGGCTACATACCTCTCTCCAGAAATCCACAACGGGAGCACGTTGAGTTGTTTATTGACAATGCACCTCGGATCTTCGAGAGGGCAATCAAAGAGGTGGAGGCTGAAACAGGACACAAGTTTGGCTGCTTGATTTCGGATGCATTATTCTGGTTTGCTGCAGACATAGCCGAGAAAATGCACGTCCCTTGGGTGACCTCATGGATTGGTGATATACGCTCACTTTTTGTTCATATCGAGACTGATATAATTAGAGATAAAGTGGGAGCTCCTGGACAAGAAAACAAAACCCTGGAGTTCCTTCCGGGATTCTCCGATGAGTTTCGAGCATCTGACTTACCCAAGGAGATTGTATTTGGAGAAATAGAATCGCCATTTGCAAGAATGTTGCATAAAATGGGACAGAAGCTGCCACAAGCAGCTGCGGTTGTCGTCAACTCTTTTGAAACAATGGACTTGAAAGTTACTGAGGAACTGAAGAAAAGACTCCAAAAGTTGATCCTTGTTGGTCCACTACATCTTGTCCGGCCACTACAATCAGTAGTATCAGATGATGAGGATCAGGAGCAGGAGGAGGATGTATGCTTACAATGGCTGGACGACCACGAGCCTGCGTCGGTAGCATACATCAGCTTTGGAAGTCTGGGGGCACTACCCCCCATGGAGGTAGCAGCATTAGCTGAAGCTTTAGAGGAAGGTGGATTCCCCTTTCTTTGGTCATTTAGGGGAAACCTGGAAGACTTTCCACAAGAATTTATCGAAAGAACAAATAAGCTATCGATAGGAAAAATAGTTTCGTGGGTGAATCAAGAGCAAATCCTAAATCATACCTCGATAGGAGTGCACGTAACACATAGTGGTTGGAACTCGATTTTGGAGAGTGTAAGTTGTTGTGTTCCTATGATTGGGAGGCCTGGTTTTGCTGATCAACACATAAATATGCGGAGCGTAGAAGTGGTATGGAAAATTGGTGTGAGAATTGAGGGAGGCGTTTTCACTAAAACTGGAGCAGTCAAGGCACTGGAACAAGTCTTATCGCTTGAACAAGGAAAAGAGATGAGACAGAGAATTGGAGTCCTTAAACAGCTTGCTCAAGAGGCTGTAGGACCCAATGGGAGGTCAGCTCAAAACTTGAAAGCTTTGGTAGAGATCATCAAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko02024 ko03060 ko03070 map02024 map03060 map03070
Pfam Domains
Protein Families
60KD_IMP

Protein Analysis

464

Amino Acids

51.71

Weight (kDa)

5.54

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 113 - 429 9.8e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000328)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13832 FvH4_3g26701 FvH4_4g14350 FvH4_7g17370
malus_domestica MD12G1077900.v1.1 MD14G1070200.v1.1
prunus_persica Prupe.2G073100_v2.0.a1 Prupe.2G186800_v2.0.a1 Prupe.2G186800_v2.0.a1 Prupe.2G186800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0365191 RchiOBHm_Chr2g0105141 RchiOBHm_Chr2g0120431 RchiOBHm_Chr2g0139381 RchiOBHm_Chr3g0494421 RchiOBHm_Chr6g0248181 RchiOBHm_Chr7g0235571
rosa_laevigata RLG00000005158 RLG00000008937 RLG00000013742 RLG00000015899 RLG00000019885 RLG00000024515 RLG00000024516 RLG00000028740 RLG00000030656 RLG00000030662 RLG00000032758 RLG00000035668 RLG00000036717 RLG00000036718
rosa_multiflora Rmu_sc0000252.1_g000016 Rmu_sc0001386.1_g000020 Rmu_sc0002271.1_g000010 Rmu_sc0003833.1_g000002 Rmu_sc0004718.1_g000004 Rmu_sc0006031.1_g000006 Rmu_sc0006598.1_g000013 Rmu_sc0007472.1_g000023 Rmu_sc0009313.1_g000012
rosa_roxburghii Rroxscaffold_2G00103830 Rroxscaffold_2G00109880 Rroxscaffold_3G00225910 Rroxscaffold_3G00271600 Rroxscaffold_3G00274560 Rroxscaffold_4G00299580 Rroxscaffold_5G00352530 Rroxscaffold_5G00379280 Rroxscaffold_7G00177320
rosa_rugosa Rorug01G0027200 Rorug01G0032100 Rorug02G0050600 Rorug02G0054800 Rorug04G0083300 Rorug05G0115200 Rorug07G0006800
rosa_samantha Rh1CG086700 Rh1DG093300 Rh1DG217000 Rh2AG120200 Rh2AG227900 Rh2AG254000 Rh2AG434200 Rh2AG469200 Rh2BG159500 Rh2CG419900 Rh2CG455200 Rh2DG320100 Rh2DG603500 Rh3CG319900 Rh3DG300800 Rh3DG319200 Rh4AG199400 Rh4BG329100 Rh4BG329200 Rh4CG110800 Rh4DG042000 Rh4DG129400 Rh4DG187700 Rh4DG231900 Rh5AG038800 Rh5AG107300 Rh5AG303600 Rh5AG386500 Rh5AG454200 Rh5CG041800 Rh5CG534800 Rh5DG076400 Rh5DG109800 Rh5DG123600 Rh6AG164400 Rh6BG035100 Rh6BG036000 Rh6BG041000 Rh6BG215500 Rh6CG173900 Rh6CG174000 Rh6DG020300 Rh6DG166300 Rh6DG320000 Rh6DG509700 Rh7AG059500 Rh7AG291700 Rh7BG404300 Rh7DG402000
rosa_wichuraiana Rw1G000890 Rw1G020020 Rw3G005730 Rw4G011330 Rw4G026960 Rw5G014010 Rw6G002230 Rw7G038480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 77
AciI CCGC 3 cut(s) 75, 656, 1174
AclWI GGATC 3 cut(s) 311, 724, 798
AcoI YGGCCR 1 cut(s) 758
AcsI RAATTY 1 cut(s) 983
AcuI CTGAAG 2 cut(s) 728, 933
AdeI CACNNNGTG 1 cut(s) 1088
AfaI GTAC 2 cut(s) 22, 93
AfiI CCNNNNNNNGG 4 cut(s) 895, 945, 1136, 1347
AgsI TTSAA 6 cut(s) 105, 139, 677, 691, 1274, 1366
AhlI ACTAGT 1 cut(s) 23
AjiI CACGTC 1 cut(s) 415
AjnI CCWGG 4 cut(s) 502, 522, 963, 1144
AjuI GAANNNNNNNTTGG 2 cut(s) 1088, 1120
AloI GAACNNNNNNTCC 2 cut(s) 110, 142
Alw21I GWGCWC 3 cut(s) 273, 502, 1077
Alw26I GTCTC 2 cut(s) 464, 1285
Alw44I GTGCAC 1 cut(s) 1073
AlwI GGATC 3 cut(s) 311, 724, 798
AlwNI CAGNNNCTG 1 cut(s) 640
AoxI GGCC 2 cut(s) 758, 1142
ApaLI GTGCAC 1 cut(s) 1073
ApeKI GCWGC 6 cut(s) 357, 389, 640, 650, 653, 902
ApoI RAATTY 1 cut(s) 983
Asp700I GAANNNNTTC 1 cut(s) 972
AspS9I GGNCC 2 cut(s) 740, 1337
AsuC2I CCSGG 2 cut(s) 116, 537
AsuHPI GGTGA 5 cut(s) 52, 121, 436, 452, 1045
AvaII GGWCC 2 cut(s) 740, 1337
BaeGI GKGCMC 2 cut(s) 883, 1077
BanII GRGCYC 1 cut(s) 502
BauI CACGAG 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 975
Bbv12I GWGCWC 3 cut(s) 273, 502, 1077
BbvI GCAGC 6 cut(s) 344, 376, 627, 640, 662, 914
BccI CCATC 3 cut(s) 75, 215, 227
BcgI CGANNNNNNTGC 2 cut(s) 1054, 1088
BciT130I CCWGG 4 cut(s) 504, 524, 965, 1146
BclI TGATCA 1 cut(s) 1156
BcnI CCSGG 2 cut(s) 116, 537
BcoDI GTCTC 2 cut(s) 464, 1285
BcuI ACTAGT 1 cut(s) 23
BfaI CTAG 3 cut(s) 18, 24, 147
BfmI CTRYAG 2 cut(s) 390, 1332
BisI GCNGC 6 cut(s) 358, 390, 641, 651, 654, 903
BlsI GCNGC 6 cut(s) 359, 391, 642, 652, 655, 904
BmcAI AGTACT 1 cut(s) 22
Bme1390I CCNGG 6 cut(s) 116, 504, 524, 537, 965, 1146
Bme18I GGWCC 2 cut(s) 740, 1337
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 2 cut(s) 740, 1337
BmiI GGNNCC 2 cut(s) 175, 1339
BmrFI CCNGG 6 cut(s) 116, 504, 524, 537, 965, 1146
BmsI GCATC 2 cut(s) 361, 569
BpiI GAAGAC 1 cut(s) 975
BplI GAGNNNNNCTC 2 cut(s) 1339, 1371
BpmI CTGGAG 3 cut(s) 235, 545, 1257
BpuEI CTTGAG 1 cut(s) 1308
BpuMI CCSGG 2 cut(s) 116, 537
Bsa29I ATCGAT 1 cut(s) 1010
BsaAI YACGTR 1 cut(s) 1078
BsaBI GATNNNNATC 1 cut(s) 789
BsaJI CCNNGG 6 cut(s) 114, 299, 419, 522, 573, 891
BsaXI ACNNNNNCTCC 4 cut(s) 1062, 1092, 1132, 1162
Bsc4I CCNNNNNNNGG 4 cut(s) 895, 945, 1136, 1347
Bse1I ACTGG 2 cut(s) 1240, 1257
Bse8I GATNNNNATC 1 cut(s) 789
BseBI CCWGG 4 cut(s) 504, 524, 965, 1146
BseCI ATCGAT 1 cut(s) 1010
BseDI CCNNGG 6 cut(s) 114, 299, 419, 522, 573, 891
BseGI GGATG 4 cut(s) 67, 226, 376, 814
BseJI GATNNNNATC 1 cut(s) 789
BseLI CCNNNNNNNGG 4 cut(s) 895, 945, 1136, 1347
BseMII CTCAG 2 cut(s) 183, 690
BseNI ACTGG 2 cut(s) 1240, 1257
BseRI GAGGAG 1 cut(s) 818
BseSI GKGCMC 2 cut(s) 883, 1077
BseXI GCAGC 6 cut(s) 344, 376, 627, 640, 662, 914
BshFI GGCC 2 cut(s) 760, 1144
BshVI ATCGAT 1 cut(s) 1010
BsiHKAI GWGCWC 3 cut(s) 273, 502, 1077
BsiSI CCGG 4 cut(s) 116, 177, 536, 757
BslFI GGGAC 2 cut(s) 401, 645
BslI CCNNNNNNNGG 4 cut(s) 895, 945, 1136, 1347
BsmAI GTCTC 2 cut(s) 464, 1285
BsmFI GGGAC 2 cut(s) 401, 645
BsnI GGCC 2 cut(s) 760, 1144
Bsp1286I GDGCHC 4 cut(s) 273, 502, 883, 1077
Bsp143I GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
Bsp19I CCATGG 1 cut(s) 891
BspACI CCGC 3 cut(s) 75, 656, 1174
BspANI GGCC 2 cut(s) 760, 1144
BspCNI CTCAG 2 cut(s) 182, 691
BspDI ATCGAT 1 cut(s) 1010
BspLI GGNNCC 2 cut(s) 175, 1339
BspMAI CTGCAG 1 cut(s) 394
BspPI GGATC 3 cut(s) 311, 724, 798
BspQI GCTCTTC 1 cut(s) 84
BsrBI CCGCTC 1 cut(s) 77
BsrI ACTGG 2 cut(s) 1240, 1257
BssECI CCNNGG 6 cut(s) 114, 299, 419, 522, 573, 891
BssMI GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
BssSI CACGAG 1 cut(s) 836
BssT1I CCWWGG 3 cut(s) 419, 573, 891
Bst2BI CACGAG 1 cut(s) 836
Bst2UI CCWGG 4 cut(s) 504, 524, 965, 1146
Bst4CI ACNGT 1 cut(s) 109
Bst6I CTCTTC 2 cut(s) 84, 170
BstBAI YACGTR 1 cut(s) 1078
BstC8I GCNNGC 2 cut(s) 843, 1320
BstDEI CTNAG 3 cut(s) 46, 169, 699
BstDSI CCRYGG 1 cut(s) 891
BstEII GGTNACC 1 cut(s) 424
BstF5I GGATG 4 cut(s) 67, 226, 376, 814
BstKTI GATC 6 cut(s) 152, 306, 732, 793, 1159, 1383
BstMAI GTCTC 2 cut(s) 464, 1285
BstMBI GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
BstMWI GCNNNNNNNGC 6 cut(s) 186, 398, 851, 908, 1247, 1328
BstNI CCWGG 4 cut(s) 504, 524, 965, 1146
BstPI GGTNACC 1 cut(s) 424
BstSCI CCNGG 6 cut(s) 114, 502, 522, 535, 963, 1144
BstSFI CTRYAG 2 cut(s) 390, 1332
BstSLI GKGCMC 2 cut(s) 883, 1077
BstV1I GCAGC 6 cut(s) 344, 376, 627, 640, 662, 914
BstV2I GAAGAC 1 cut(s) 975
BstX2I RGATCY 1 cut(s) 303
BstYI RGATCY 1 cut(s) 303
Bsu15I ATCGAT 1 cut(s) 1010
BsuRI GGCC 2 cut(s) 760, 1144
BsuTUI ATCGAT 1 cut(s) 1010
BtgI CCRYGG 1 cut(s) 891
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 4 cut(s) 67, 226, 376, 814
BtsIMutI CAGTG 1 cut(s) 1250
Cac8I GCNNGC 2 cut(s) 843, 1320
CaiI CAGNNNCTG 1 cut(s) 640
Cfr13I GGNCC 2 cut(s) 740, 1337
ClaI ATCGAT 1 cut(s) 1010
CseI GACGC 1 cut(s) 834
Csp6I GTAC 2 cut(s) 21, 92
CviAII CATG 2 cut(s) 432, 892
CviQI GTAC 2 cut(s) 21, 92
DdeI CTNAG 3 cut(s) 46, 169, 699
DpnI GATC 6 cut(s) 151, 305, 731, 792, 1158, 1382
DpnII GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
DraIII CACNNNGTG 1 cut(s) 1088
EaeI YGGCCR 1 cut(s) 758
Eam1104I CTCTTC 2 cut(s) 84, 170
EarI CTCTTC 2 cut(s) 84, 170
Ecl136II GAGCTC 1 cut(s) 500
Eco130I CCWWGG 3 cut(s) 419, 573, 891
Eco147I AGGCCT 1 cut(s) 1144
Eco24I GRGCYC 1 cut(s) 502
Eco47I GGWCC 2 cut(s) 740, 1337
Eco53kI GAGCTC 1 cut(s) 500
Eco57I CTGAAG 2 cut(s) 728, 933
Eco91I GGTNACC 1 cut(s) 424
EcoICRI GAGCTC 1 cut(s) 500
EcoO109I RGGNCCY 1 cut(s) 1337
EcoO65I GGTNACC 1 cut(s) 424
EcoRII CCWGG 4 cut(s) 502, 522, 963, 1144
EcoT14I CCWWGG 3 cut(s) 419, 573, 891
EcoT22I ATGCAT 1 cut(s) 376
EcoT38I GRGCYC 1 cut(s) 502
ErhI CCWWGG 3 cut(s) 419, 573, 891
FaeI CATG 2 cut(s) 435, 895
FaqI GGGAC 2 cut(s) 401, 645
FatI CATG 2 cut(s) 431, 891
FbaI TGATCA 1 cut(s) 1156
Fnu4HI GCNGC 6 cut(s) 358, 390, 641, 651, 654, 903
FokI GGATG 4 cut(s) 54, 233, 383, 821
FriOI GRGCYC 1 cut(s) 502
Fsp4HI GCNGC 6 cut(s) 358, 390, 641, 651, 654, 903
FspBI CTAG 3 cut(s) 18, 24, 147
GluI GCNGC 6 cut(s) 358, 390, 641, 651, 654, 903
GsuI CTGGAG 3 cut(s) 235, 545, 1257
HaeIII GGCC 2 cut(s) 760, 1144
HapII CCGG 4 cut(s) 116, 177, 536, 757
HgaI GACGC 1 cut(s) 834
Hin1II CATG 2 cut(s) 435, 895
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HindIII AAGCTT 3 cut(s) 915, 1368, 1389
HinfI GANTC 6 cut(s) 540, 599, 717, 933, 1036, 1305
HpaII CCGG 4 cut(s) 116, 177, 536, 757
HphI GGTGA 5 cut(s) 52, 121, 436, 452, 1045
Hpy166II GTNNAC 4 cut(s) 129, 667, 743, 1075
Hpy188I TCNGA 5 cut(s) 303, 370, 547, 565, 781
Hpy188III TCNNGA 7 cut(s) 147, 252, 310, 469, 794, 1040, 1325
Hpy8I GTNNAC 4 cut(s) 129, 667, 743, 1075
Hpy99I CGWCG 1 cut(s) 850
HpyAV CCTTC 3 cut(s) 142, 542, 920
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4IV ACGT 5 cut(s) 94, 213, 273, 414, 1077
HpyCH4V TGCA 9 cut(s) 41, 124, 296, 374, 392, 412, 611, 622, 1075
HpyF10VI GCNNNNNNNGC 6 cut(s) 186, 398, 851, 908, 1247, 1328
HpyF3I CTNAG 3 cut(s) 46, 169, 699
HpySE526I ACGT 5 cut(s) 94, 213, 273, 414, 1077
Hsp92II CATG 2 cut(s) 435, 895
Ksp22I TGATCA 1 cut(s) 1156
Kzo9I GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
LguI GCTCTTC 1 cut(s) 84
LmnI GCTCC 7 cut(s) 164, 268, 497, 505, 796, 1176, 1238
Lsp1109I GCAGC 6 cut(s) 344, 376, 627, 640, 662, 914
LweI GCATC 2 cut(s) 361, 569
MaeI CTAG 3 cut(s) 18, 24, 147
MaeII ACGT 5 cut(s) 94, 213, 273, 414, 1077
MaeIII GTNAC 3 cut(s) 424, 694, 1078
MalI GATC 6 cut(s) 151, 305, 731, 792, 1158, 1382
MbiI CCGCTC 1 cut(s) 77
MboI GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
MboII GAAGA 7 cut(s) 71, 74, 127, 157, 298, 721, 980
MflI RGATCY 1 cut(s) 303
MhlI GDGCHC 4 cut(s) 273, 502, 883, 1077
MluCI AATT 5 cut(s) 480, 983, 1197, 1209, 1299
MlyI GAGTC 2 cut(s) 711, 1314
MmeI TCCRAC 1 cut(s) 1073
Mph1103I ATGCAT 1 cut(s) 376
MroXI GAANNNNTTC 1 cut(s) 972
MseI TTAA 1 cut(s) 1311
MslI CAYNNNNRTG 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 4 cut(s) 116, 177, 536, 757
MspR9I CCNGG 6 cut(s) 116, 504, 524, 537, 965, 1146
MvaI CCWGG 4 cut(s) 504, 524, 965, 1146
MwoI GCNNNNNNNGC 6 cut(s) 186, 398, 851, 908, 1247, 1328
NciI CCSGG 2 cut(s) 116, 537
NcoI CCATGG 1 cut(s) 891
NdeII GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
NlaIII CATG 2 cut(s) 435, 895
NlaIV GGNNCC 2 cut(s) 175, 1339
NmeAIII GCCGAG 1 cut(s) 427
NmuCI GTSAC 1 cut(s) 424
NsiI ATGCAT 1 cut(s) 376
PceI AGGCCT 1 cut(s) 1144
PciSI GCTCTTC 1 cut(s) 84
PcsI WCGNNNNNNNCGW 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 972
PfeI GAWTC 4 cut(s) 540, 599, 933, 1036
PfoI TCCNGGA 2 cut(s) 502, 535
PkrI GCNGC 6 cut(s) 359, 391, 642, 652, 655, 904
PleI GAGTC 2 cut(s) 711, 1313
PpsI GAGTC 2 cut(s) 711, 1313
Ppu21I YACGTR 1 cut(s) 1078
PpuMI RGGWCCY 1 cut(s) 1337
Psp124BI GAGCTC 1 cut(s) 502
Psp5II RGGWCCY 1 cut(s) 1337
Psp6I CCWGG 4 cut(s) 502, 522, 963, 1144
PspEI GGTNACC 1 cut(s) 424
PspGI CCWGG 4 cut(s) 502, 522, 963, 1144
PspN4I GGNNCC 2 cut(s) 175, 1339
PspPI GGNCC 2 cut(s) 740, 1337
PspPPI RGGWCCY 1 cut(s) 1337
PstI CTGCAG 1 cut(s) 394
PstNI CAGNNNCTG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 303
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 2 cut(s) 22, 93
RsaNI GTAC 2 cut(s) 21, 92
RseI CAYNNNNRTG 1 cut(s) 1169
SacI GAGCTC 1 cut(s) 502
SapI GCTCTTC 1 cut(s) 84
SaqAI TTAA 1 cut(s) 1311
SatI GCNGC 6 cut(s) 358, 390, 641, 651, 654, 903
Sau3AI GATC 6 cut(s) 149, 303, 729, 790, 1156, 1380
Sau96I GGNCC 2 cut(s) 740, 1337
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 2 cut(s) 711, 1314
ScrFI CCNGG 6 cut(s) 116, 504, 524, 537, 965, 1146
SduI GDGCHC 4 cut(s) 273, 502, 883, 1077
SfaNI GCATC 2 cut(s) 361, 569
SfcI CTRYAG 2 cut(s) 390, 1332
SinI GGWCC 2 cut(s) 740, 1337
SmiMI CAYNNNNRTG 1 cut(s) 1169
SmlI CTYRAG 1 cut(s) 1323
SmoI CTYRAG 1 cut(s) 1323
SpeI ACTAGT 1 cut(s) 23
Sse9I AATT 5 cut(s) 480, 983, 1197, 1209, 1299
SseBI AGGCCT 1 cut(s) 1144
SsiI CCGC 3 cut(s) 75, 656, 1174
SspMI CTAG 3 cut(s) 18, 24, 147
SstI GAGCTC 1 cut(s) 502
StuI AGGCCT 1 cut(s) 1144
StyD4I CCNGG 6 cut(s) 114, 502, 522, 535, 963, 1144
StyI CCWWGG 3 cut(s) 419, 573, 891
TaaI ACNGT 1 cut(s) 109
TaiI ACGT 5 cut(s) 97, 216, 276, 417, 1080
TaqI TCGA 9 cut(s) 31, 85, 309, 468, 556, 990, 1010, 1064, 1100
TasI AATT 5 cut(s) 480, 983, 1197, 1209, 1299
TatI WGTACW 1 cut(s) 20
TfiI GAWTC 4 cut(s) 540, 599, 933, 1036
Tru1I TTAA 1 cut(s) 1311
Tru9I TTAA 1 cut(s) 1311
TscAI CASTG 1 cut(s) 1257
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 6 cut(s) 357, 389, 640, 650, 653, 902
Tsp45I GTSAC 1 cut(s) 424
TspDTI ATGAA 1 cut(s) 452
TspRI CASTG 1 cut(s) 1257
VneI GTGCAC 1 cut(s) 1073
VpaK11BI GGWCC 2 cut(s) 740, 1337
XapI RAATTY 1 cut(s) 983
XbaI TCTAGA 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 3 cut(s) 18, 24, 147
ZrmI AGTACT 1 cut(s) 22
Zsp2I ATGCAT 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.