Rorug07G0006800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000328
Physical Location & Seq
Forward (+)
531839 .. 535094
3256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0006800.1

Sequence Viewer

Length: 1785 bp
ATGGGCAAGACTATGGCGGTGGGAGTACCAGTCATCATCGCCTTTCTGATCCTGTGCGGCGCTGCAGATCTGGTTACCTCCGACGCCTCCAATCATCGTTACAAAGAAGGAGATGCAGTCCCGCTCTACGCCAACAAGGTCGGGCCCTTTCACAACCCCAGTGAAACCTACAGGTACTTTGATCTCCCTTTCTGCTCACCAGATGCGGTTAAAGAGAAAAAGGAAGCTCTTGGTGAAGTATTGAATGGGGATCGTTTAGTCAGCGCCCCTTACAAGCTTGAGTTCCTGAAACATAAAGATTCGGAACTGGTTTGCAAAAGGACTCTCAAGAAGGAAGAAGTGGCCAAGTTCAGATCTGCTGTGAACAAGGACTATTACTTTCAAATGTATTATGATGACTTGCCCATCTGGGGTTTCATTGGGAAGGTCGACAAGGAAAACAAGGACCCAAGCGAGTACAAGACCTACCTCTATAAGCACATTCATTTTGATATCTTGTACAACAAGGACCGTGTGATCGAAATCAATGTTCAAACAGATCCTCATGCTCTAGTGGACCTTACTGAGGACAAAGAAGTCCATGTTGAGTTTTTGTATACAGTAAAATGGAGGGAAACAAACACTCCTTTTGATAAGAGGATGGATAAGTATTCTCAGTCCTCATCGCTGCCTCATCATTTGGAGATCCATTGGTTCTCCATTATTAATTCATGTGTCACAGTTCTGCTCTTGACTGGGTTTCTTGCCACAATTCTTATGCGAGTGCTTAAGAATGATTTTGTCAAATATGCCCATGATGAGGAAGCAGCTGAAGACCAAGAAGAGACTGGATGGAAATACATTCACGGAGATGTATTTAGGTTTCCCAAATACAAGTCTCTGTTTGCAGCAGCTCTTGGTTCCGGCACCCAACTGTTTACACTTACTATCTTCATCTTCGTACTCGCTCTTGTCGGTGTCTTTTATCCATACAACCGAGGTGCTTTATTTACCGCTCTAGTTGTAATTTATGCGCTCACGTCGGGAATTGCAGGCTATACTGCTACTTCATTTTATTGCCAGCTAGAGGGGACAAACTGGGTTCGAAATCTGTTGTTGACGGGATGCCTCTTCTGTGGACCTTTGTTTCTCACATTCTGCTTTTTGAATACTGTCGCAATTGCTTACACAGCCACTGCAGCACTTCCATTTGGCACAATTGTGGTTATAGTTCTAATATGGACACTTGTTACATCACCTTTATTGGTGTTGGGTGGGATTGCCGGGAAGAACAGTAAAGCTGAGTTCCAGGCTCCTGTTCGCACCACTAAGTATCCCAGAGAGATTCCGCCTTTGCCTTGGTACCGGGCAACAGTCCCTCAAATGGCAATGGCTGGCTTTCTGCCTTTCAGTGCCATATATATTGAACTGTACTACATCTTTGCCAGTGTCTGGGGTCACAGGATTTACACCATTTACAGCATCTTGTTTATCGTGTTTATCATTCTACTGATAGTCACCGCTTTCATTACCGTGGCATTGACATATTTCCAACTAGCTGCTGAGGACCATGAGTGGTGGTGGAGATCTTTTCTCTGTGGTGGGTCGACTGGCATATTTATCTATGCCTACTGTTTGTATTACTACTACGCACGCTCAGATATGTCTGGATTTATGCAAACATCATTCTTCTTTGGTTACATGGCATGCATCTGCTACGGTTTCTTCCTCATGCTCGGATCTGTGGGTTTCCGGGCAGCTTTGCTTTTTGTGCGTCACATATACCGATCCATTAAGTGCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

594

Amino Acids

67.92

Weight (kDa)

7.2

Isoelectric Point (pI)

36.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EMP70 PF02990 56 - 551 6.2e-183 Endomembrane protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000328)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13832 FvH4_3g26701 FvH4_4g14350 FvH4_7g17370
malus_domestica MD12G1077900.v1.1 MD14G1070200.v1.1
prunus_persica Prupe.2G073100_v2.0.a1 Prupe.2G186800_v2.0.a1 Prupe.2G186800_v2.0.a1 Prupe.2G186800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0365191 RchiOBHm_Chr2g0105141 RchiOBHm_Chr2g0120431 RchiOBHm_Chr2g0139381 RchiOBHm_Chr3g0494421 RchiOBHm_Chr6g0248181 RchiOBHm_Chr7g0235571
rosa_laevigata RLG00000005158 RLG00000008937 RLG00000013742 RLG00000015899 RLG00000019885 RLG00000024515 RLG00000024516 RLG00000028740 RLG00000030656 RLG00000030662 RLG00000032758 RLG00000035668 RLG00000036717 RLG00000036718
rosa_multiflora Rmu_sc0000252.1_g000016 Rmu_sc0001386.1_g000020 Rmu_sc0002271.1_g000010 Rmu_sc0003833.1_g000002 Rmu_sc0004718.1_g000004 Rmu_sc0006031.1_g000006 Rmu_sc0006598.1_g000013 Rmu_sc0007472.1_g000023 Rmu_sc0009313.1_g000012
rosa_roxburghii Rroxscaffold_2G00103830 Rroxscaffold_2G00109880 Rroxscaffold_3G00225910 Rroxscaffold_3G00271600 Rroxscaffold_3G00274560 Rroxscaffold_4G00299580 Rroxscaffold_5G00352530 Rroxscaffold_5G00379280 Rroxscaffold_7G00177320
rosa_rugosa Rorug01G0027200 Rorug01G0032100 Rorug02G0050600 Rorug02G0054800 Rorug04G0083300 Rorug05G0115200 Rorug07G0006800
rosa_samantha Rh1CG086700 Rh1DG093300 Rh1DG217000 Rh2AG120200 Rh2AG227900 Rh2AG254000 Rh2AG434200 Rh2AG469200 Rh2BG159500 Rh2CG419900 Rh2CG455200 Rh2DG320100 Rh2DG603500 Rh3CG319900 Rh3DG300800 Rh3DG319200 Rh4AG199400 Rh4BG329100 Rh4BG329200 Rh4CG110800 Rh4DG042000 Rh4DG129400 Rh4DG187700 Rh4DG231900 Rh5AG038800 Rh5AG107300 Rh5AG303600 Rh5AG386500 Rh5AG454200 Rh5CG041800 Rh5CG534800 Rh5DG076400 Rh5DG109800 Rh5DG123600 Rh6AG164400 Rh6BG035100 Rh6BG036000 Rh6BG041000 Rh6BG215500 Rh6CG173900 Rh6CG174000 Rh6DG020300 Rh6DG166300 Rh6DG320000 Rh6DG509700 Rh7AG059500 Rh7AG291700 Rh7BG404300 Rh7DG402000
rosa_wichuraiana Rw1G000890 Rw1G020020 Rw3G005730 Rw4G011330 Rw4G026960 Rw5G014010 Rw6G002230 Rw7G038480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 575
Acc65I GGTACC 1 cut(s) 1341
AccB1I GGYRCC 2 cut(s) 905, 1341
AccB7I CCANNNNNTGG 1 cut(s) 1431
AccBSI CCGCTC 2 cut(s) 124, 995
AccI GTMKAC 3 cut(s) 429, 596, 1586
AciI CCGC 7 cut(s) 17, 57, 122, 206, 993, 1328, 1500
AclWI GGATC 6 cut(s) 43, 258, 533, 679, 1726, 1761
AcoI YGGCCR 1 cut(s) 342
AcuI CTGAAG 1 cut(s) 831
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 7 cut(s) 27, 176, 458, 500, 942, 1343, 1412
AfiI CCNNNNNNNGG 6 cut(s) 410, 565, 799, 1066, 1363, 1431
AflII CTTAAG 1 cut(s) 767
AgsI TTSAA 5 cut(s) 244, 383, 533, 1147, 1406
AjiI CACGTC 1 cut(s) 1020
AjnI CCWGG 1 cut(s) 1287
AleI CACNNNNGTG 1 cut(s) 1199
AluBI AGCT 8 cut(s) 227, 277, 809, 893, 1063, 1280, 1538, 1739
AluI AGCT 8 cut(s) 227, 277, 809, 893, 1063, 1280, 1538, 1739
Alw26I GTCTC 2 cut(s) 818, 882
AlwI GGATC 6 cut(s) 43, 258, 533, 679, 1726, 1761
AlwNI CAGNNNCTG 2 cut(s) 1175, 1431
AoxI GGCC 2 cut(s) 143, 342
ApaI GGGCCC 1 cut(s) 147
ApeKI GCWGC 8 cut(s) 62, 667, 806, 887, 890, 1178, 1538, 1736
AseI ATTAAT 1 cut(s) 705
Asp718I GGTACC 1 cut(s) 1341
AspLEI GCGC 3 cut(s) 62, 266, 1015
AspS9I GGNCC 7 cut(s) 143, 144, 445, 508, 556, 1118, 1546
AsuC2I CCSGG 3 cut(s) 1264, 1346, 1733
AsuHPI GGTGA 4 cut(s) 189, 245, 1227, 1489
AsuII TTCGAA 1 cut(s) 1084
AvaII GGWCC 5 cut(s) 445, 508, 556, 1118, 1546
BaeGI GKGCMC 1 cut(s) 147
BalI TGGCCA 1 cut(s) 344
BanI GGYRCC 2 cut(s) 905, 1341
BanII GRGCYC 1 cut(s) 147
BbsI GAAGAC 1 cut(s) 819
BbvCI CCTCAGC 1 cut(s) 1542
BbvI GCAGC 8 cut(s) 49, 654, 818, 899, 902, 1190, 1525, 1748
BccI CCATC 3 cut(s) 413, 634, 825
BciT130I CCWGG 1 cut(s) 1289
BciVI GTATCC 1 cut(s) 1323
BcnI CCSGG 3 cut(s) 1264, 1346, 1733
BcoDI GTCTC 2 cut(s) 818, 882
BfaI CTAG 4 cut(s) 551, 998, 1064, 1535
BfmI CTRYAG 3 cut(s) 63, 169, 1176
BfoI RGCGCY 2 cut(s) 63, 267
BfrI CTTAAG 1 cut(s) 767
BfuI GTATCC 1 cut(s) 1323
BglII AGATCT 3 cut(s) 67, 353, 1565
BisI GCNGC 9 cut(s) 58, 63, 668, 807, 888, 891, 1179, 1539, 1737
BlsI GCNGC 9 cut(s) 59, 64, 669, 808, 889, 892, 1180, 1540, 1738
Bme1390I CCNGG 4 cut(s) 1264, 1289, 1346, 1733
Bme18I GGWCC 5 cut(s) 445, 508, 556, 1118, 1546
BmgBI CACGTC 1 cut(s) 1020
BmgT120I GGNCC 7 cut(s) 143, 144, 445, 508, 556, 1118, 1546
BmiI GGNNCC 6 cut(s) 145, 447, 901, 907, 1293, 1343
BmrFI CCNGG 4 cut(s) 1264, 1289, 1346, 1733
BmrI ACTGGG 3 cut(s) 153, 744, 1087
BmsI GCATC 5 cut(s) 103, 193, 1094, 1470, 1698
BmuI ACTGGG 3 cut(s) 153, 744, 1087
BpiI GAAGAC 1 cut(s) 819
Bpu10I CCTNAGC 1 cut(s) 1542
Bpu14I TTCGAA 1 cut(s) 1084
BpuEI CTTGAG 2 cut(s) 299, 311
BpuMI CCSGG 3 cut(s) 1264, 1346, 1733
BsaBI GATNNNNATC 1 cut(s) 521
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 3 cut(s) 976, 1337, 1512
BsaXI ACNNNNNCTCC 6 cut(s) 15, 45, 102, 132, 607, 637
Bsc4I CCNNNNNNNGG 6 cut(s) 410, 565, 799, 1066, 1363, 1431
Bse1I ACTGG 8 cut(s) 29, 159, 312, 739, 832, 1082, 1425, 1594
Bse3DI GCAATG 1 cut(s) 1374
Bse8I GATNNNNATC 1 cut(s) 521
BseBI CCWGG 1 cut(s) 1289
BseDI CCNNGG 3 cut(s) 976, 1337, 1512
BseGI GGATG 3 cut(s) 645, 836, 1109
BseJI GATNNNNATC 1 cut(s) 521
BseLI CCNNNNNNNGG 6 cut(s) 410, 565, 799, 1066, 1363, 1431
BseMI GCAATG 1 cut(s) 1374
BseMII CTCAG 5 cut(s) 555, 668, 1272, 1533, 1650
BseNI ACTGG 8 cut(s) 29, 159, 312, 739, 832, 1082, 1425, 1594
BseSI GKGCMC 1 cut(s) 147
BseXI GCAGC 8 cut(s) 49, 654, 818, 899, 902, 1190, 1525, 1748
BshFI GGCC 2 cut(s) 145, 344
BshNI GGYRCC 2 cut(s) 905, 1341
BsiSI CCGG 4 cut(s) 903, 1263, 1345, 1732
BslFI GGGAC 3 cut(s) 104, 1084, 1340
BslI CCNNNNNNNGG 6 cut(s) 410, 565, 799, 1066, 1363, 1431
BsmAI GTCTC 2 cut(s) 818, 882
BsmFI GGGAC 3 cut(s) 104, 1084, 1340
BsnI GGCC 2 cut(s) 145, 344
Bsp119I TTCGAA 1 cut(s) 1084
Bsp120I GGGCCC 1 cut(s) 143
Bsp1286I GDGCHC 1 cut(s) 147
Bsp1407I TGTACA 1 cut(s) 498
BspACI CCGC 7 cut(s) 17, 57, 122, 206, 993, 1328, 1500
BspANI GGCC 2 cut(s) 145, 344
BspCNI CTCAG 5 cut(s) 556, 667, 1273, 1534, 1649
BspLI GGNNCC 6 cut(s) 145, 447, 901, 907, 1293, 1343
BspMAI CTGCAG 2 cut(s) 67, 1180
BspPI GGATC 6 cut(s) 43, 258, 533, 679, 1726, 1761
BspT104I TTCGAA 1 cut(s) 1084
BspT107I GGYRCC 2 cut(s) 905, 1341
BspTI CTTAAG 1 cut(s) 767
BsrBI CCGCTC 2 cut(s) 124, 995
BsrDI GCAATG 1 cut(s) 1374
BsrGI TGTACA 1 cut(s) 498
BsrI ACTGG 8 cut(s) 29, 159, 312, 739, 832, 1082, 1425, 1594
BssECI CCNNGG 3 cut(s) 976, 1337, 1512
BssNAI GTATAC 1 cut(s) 597
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 1 cut(s) 1337
Bst1107I GTATAC 1 cut(s) 597
Bst2UI CCWGG 1 cut(s) 1289
Bst6I CTCTTC 2 cut(s) 816, 1115
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 767
BstAUI TGTACA 1 cut(s) 498
BstBI TTCGAA 1 cut(s) 1084
BstC8I GCNNGC 5 cut(s) 1033, 1061, 1375, 1633, 1687
BstDEI CTNAG 6 cut(s) 564, 654, 1281, 1308, 1542, 1636
BstDSI CCRYGG 1 cut(s) 1512
BstEII GGTNACC 1 cut(s) 73
BstENI CCTNNNNNAGG 1 cut(s) 563
BstF5I GGATG 3 cut(s) 645, 836, 1109
BstH2I RGCGCY 2 cut(s) 63, 267
BstHHI GCGC 3 cut(s) 62, 266, 1015
BstMAI GTCTC 2 cut(s) 818, 882
BstMWI GCNNNNNNNGC 3 cut(s) 1169, 1178, 1750
BstNI CCWGG 1 cut(s) 1289
BstNSI RCATGY 1 cut(s) 1689
BstPI GGTNACC 1 cut(s) 73
BstSCI CCNGG 4 cut(s) 1262, 1287, 1344, 1731
BstSFI CTRYAG 3 cut(s) 63, 169, 1176
BstSLI GKGCMC 1 cut(s) 147
BstV1I GCAGC 8 cut(s) 49, 654, 818, 899, 902, 1190, 1525, 1748
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 6 cut(s) 67, 353, 538, 684, 1565, 1718
BstYI RGATCY 6 cut(s) 67, 353, 538, 684, 1565, 1718
BstZ17I GTATAC 1 cut(s) 597
BsuI GTATCC 1 cut(s) 1323
BsuRI GGCC 2 cut(s) 145, 344
BtgI CCRYGG 1 cut(s) 1512
BtgZI GCGATG 2 cut(s) 22, 648
BtrI CACGTC 1 cut(s) 1020
BtsCI GGATG 3 cut(s) 645, 836, 1109
BtsI GCAGTG 1 cut(s) 1173
BtsIMutI CAGTG 4 cut(s) 166, 1173, 1396, 1432
Cac8I GCNNGC 5 cut(s) 1033, 1061, 1375, 1633, 1687
CaiI CAGNNNCTG 2 cut(s) 1175, 1431
CfoI GCGC 3 cut(s) 62, 266, 1015
Cfr13I GGNCC 7 cut(s) 143, 144, 445, 508, 556, 1118, 1546
CseI GACGC 2 cut(s) 92, 1742
Csp6I GTAC 7 cut(s) 26, 175, 457, 499, 941, 1342, 1411
CviAII CATG 8 cut(s) 545, 581, 711, 794, 1550, 1681, 1686, 1711
CviQI GTAC 7 cut(s) 26, 175, 457, 499, 941, 1342, 1411
DdeI CTNAG 6 cut(s) 564, 654, 1281, 1308, 1542, 1636
DrdI GACNNNNNNGTC 1 cut(s) 575
DseDI GACNNNNNNGTC 1 cut(s) 575
EaeI YGGCCR 1 cut(s) 342
Eam1104I CTCTTC 2 cut(s) 816, 1115
EarI CTCTTC 2 cut(s) 816, 1115
EciI GGCGGA 1 cut(s) 1317
Eco130I CCWWGG 1 cut(s) 1337
Eco24I GRGCYC 1 cut(s) 147
Eco32I GATATC 1 cut(s) 493
Eco47I GGWCC 5 cut(s) 445, 508, 556, 1118, 1546
Eco57I CTGAAG 1 cut(s) 831
Eco91I GGTNACC 1 cut(s) 73
EcoNI CCTNNNNNAGG 1 cut(s) 563
EcoO109I RGGNCCY 2 cut(s) 144, 445
EcoO65I GGTNACC 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 1287
EcoRV GATATC 1 cut(s) 493
EcoT14I CCWWGG 1 cut(s) 1337
EcoT22I ATGCAT 1 cut(s) 1691
EcoT38I GRGCYC 1 cut(s) 147
ErhI CCWWGG 1 cut(s) 1337
FaeI CATG 8 cut(s) 548, 584, 714, 797, 1553, 1684, 1689, 1714
FaqI GGGAC 3 cut(s) 104, 1084, 1340
FatI CATG 8 cut(s) 544, 580, 710, 793, 1549, 1680, 1685, 1710
FauI CCCGC 1 cut(s) 129
FblI GTMKAC 3 cut(s) 429, 596, 1586
Fnu4HI GCNGC 9 cut(s) 58, 63, 668, 807, 888, 891, 1179, 1539, 1737
FokI GGATG 3 cut(s) 652, 843, 1116
FriOI GRGCYC 1 cut(s) 147
Fsp4HI GCNGC 9 cut(s) 58, 63, 668, 807, 888, 891, 1179, 1539, 1737
FspBI CTAG 4 cut(s) 551, 998, 1064, 1535
GlaI GCGC 3 cut(s) 61, 265, 1014
GluI GCNGC 9 cut(s) 58, 63, 668, 807, 888, 891, 1179, 1539, 1737
HaeII RGCGCY 2 cut(s) 63, 267
HaeIII GGCC 2 cut(s) 145, 344
HapII CCGG 4 cut(s) 903, 1263, 1345, 1732
HgaI GACGC 2 cut(s) 92, 1742
HhaI GCGC 3 cut(s) 62, 266, 1015
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 8 cut(s) 548, 584, 714, 797, 1553, 1684, 1689, 1714
Hin6I GCGC 3 cut(s) 60, 264, 1013
HinP1I GCGC 3 cut(s) 60, 264, 1013
HincII GTYRAC 3 cut(s) 430, 1098, 1587
HindII GTYRAC 3 cut(s) 430, 1098, 1587
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 3 cut(s) 299, 322, 1324
HpaII CCGG 4 cut(s) 903, 1263, 1345, 1732
HphI GGTGA 4 cut(s) 189, 245, 1227, 1489
Hpy166II GTNNAC 8 cut(s) 364, 430, 556, 597, 918, 1098, 1118, 1587
Hpy188I TCNGA 6 cut(s) 48, 82, 304, 353, 1639, 1718
Hpy188III TCNNGA 5 cut(s) 286, 328, 730, 1023, 1647
Hpy8I GTNNAC 8 cut(s) 364, 430, 556, 597, 918, 1098, 1118, 1587
Hpy99I CGWCG 2 cut(s) 86, 1024
HpyAV CCTTC 3 cut(s) 101, 325, 418
HpyCH4IV ACGT 1 cut(s) 1019
HpyCH4V TGCA 8 cut(s) 65, 116, 315, 887, 1031, 1178, 1657, 1689
HpyF10VI GCNNNNNNNGC 3 cut(s) 1169, 1178, 1750
HpyF3I CTNAG 6 cut(s) 564, 654, 1281, 1308, 1542, 1636
HpySE526I ACGT 1 cut(s) 1019
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 8 cut(s) 548, 584, 714, 797, 1553, 1684, 1689, 1714
HspAI GCGC 3 cut(s) 60, 264, 1013
KpnI GGTACC 1 cut(s) 1345
LmnI GCTCC 1 cut(s) 1297
Lsp1109I GCAGC 8 cut(s) 49, 654, 818, 899, 902, 1190, 1525, 1748
LweI GCATC 5 cut(s) 103, 193, 1094, 1470, 1698
MaeI CTAG 4 cut(s) 551, 998, 1064, 1535
MaeII ACGT 1 cut(s) 1019
MaeIII GTNAC 8 cut(s) 73, 98, 715, 1228, 1436, 1495, 1676, 1754
MbiI CCGCTC 2 cut(s) 124, 995
MboII GAAGA 9 cut(s) 347, 824, 833, 922, 928, 1102, 1279, 1660, 1696
MfeI CAATTG 2 cut(s) 1158, 1197
MflI RGATCY 6 cut(s) 67, 353, 538, 684, 1565, 1718
MhlI GDGCHC 1 cut(s) 147
MlsI TGGCCA 1 cut(s) 344
MluCI AATT 6 cut(s) 706, 750, 1005, 1026, 1158, 1197
MluNI TGGCCA 1 cut(s) 344
MlyI GAGTC 1 cut(s) 316
MmeI TCCRAC 2 cut(s) 105, 1555
Mox20I TGGCCA 1 cut(s) 344
Mph1103I ATGCAT 1 cut(s) 1691
MscI TGGCCA 1 cut(s) 344
MseI TTAA 4 cut(s) 210, 705, 768, 1773
MslI CAYNNNNRTG 3 cut(s) 849, 1199, 1511
Msp20I TGGCCA 1 cut(s) 344
MspA1I CMGCKG 1 cut(s) 809
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 4 cut(s) 903, 1263, 1345, 1732
MspR9I CCNGG 4 cut(s) 1264, 1289, 1346, 1733
MunI CAATTG 2 cut(s) 1158, 1197
MvaI CCWGG 1 cut(s) 1289
MwoI GCNNNNNNNGC 3 cut(s) 1169, 1178, 1750
NciI CCSGG 3 cut(s) 1264, 1346, 1733
NlaIII CATG 8 cut(s) 548, 584, 714, 797, 1553, 1684, 1689, 1714
NlaIV GGNNCC 6 cut(s) 145, 447, 901, 907, 1293, 1343
NmuCI GTSAC 4 cut(s) 715, 1436, 1495, 1754
NsiI ATGCAT 1 cut(s) 1691
NspI RCATGY 1 cut(s) 1689
NspV TTCGAA 1 cut(s) 1084
OliI CACNNNNGTG 1 cut(s) 1199
PaeI GCATGC 1 cut(s) 1689
PfeI GAWTC 2 cut(s) 299, 1324
PflMI CCANNNNNTGG 1 cut(s) 1431
PkrI GCNGC 9 cut(s) 59, 64, 669, 808, 889, 892, 1180, 1540, 1738
PleI GAGTC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 316
PpuMI RGGWCCY 1 cut(s) 445
PshBI ATTAAT 1 cut(s) 705
Psp5II RGGWCCY 1 cut(s) 445
Psp6I CCWGG 1 cut(s) 1287
PspEI GGTNACC 1 cut(s) 73
PspGI CCWGG 1 cut(s) 1287
PspN4I GGNNCC 6 cut(s) 145, 447, 901, 907, 1293, 1343
PspOMI GGGCCC 1 cut(s) 143
PspPI GGNCC 7 cut(s) 143, 144, 445, 508, 556, 1118, 1546
PspPPI RGGWCCY 1 cut(s) 445
PstI CTGCAG 2 cut(s) 67, 1180
PstNI CAGNNNCTG 2 cut(s) 1175, 1431
PsuI RGATCY 6 cut(s) 67, 353, 538, 684, 1565, 1718
PvuII CAGCTG 1 cut(s) 809
RsaI GTAC 7 cut(s) 27, 176, 458, 500, 942, 1343, 1412
RsaNI GTAC 7 cut(s) 26, 175, 457, 499, 941, 1342, 1411
RseI CAYNNNNRTG 3 cut(s) 849, 1199, 1511
SalI GTCGAC 2 cut(s) 428, 1585
SaqAI TTAA 4 cut(s) 210, 705, 768, 1773
SatI GCNGC 9 cut(s) 58, 63, 668, 807, 888, 891, 1179, 1539, 1737
Sau96I GGNCC 7 cut(s) 143, 144, 445, 508, 556, 1118, 1546
SchI GAGTC 1 cut(s) 316
ScrFI CCNGG 4 cut(s) 1264, 1289, 1346, 1733
SduI GDGCHC 1 cut(s) 147
SfaNI GCATC 5 cut(s) 103, 193, 1094, 1470, 1698
SfcI CTRYAG 3 cut(s) 63, 169, 1176
SfuI TTCGAA 1 cut(s) 1084
SinI GGWCC 5 cut(s) 445, 508, 556, 1118, 1546
SmiMI CAYNNNNRTG 3 cut(s) 849, 1199, 1511
SmlI CTYRAG 3 cut(s) 278, 326, 767
SmoI CTYRAG 3 cut(s) 278, 326, 767
SphI GCATGC 1 cut(s) 1689
Sse9I AATT 6 cut(s) 706, 750, 1005, 1026, 1158, 1197
SsiI CCGC 7 cut(s) 17, 57, 122, 206, 993, 1328, 1500
SspMI CTAG 4 cut(s) 551, 998, 1064, 1535
StyD4I CCNGG 4 cut(s) 1262, 1287, 1344, 1731
StyI CCWWGG 1 cut(s) 1337
TaiI ACGT 1 cut(s) 1022
TaqI TCGA 4 cut(s) 429, 519, 1084, 1586
TasI AATT 6 cut(s) 706, 750, 1005, 1026, 1158, 1197
TatI WGTACW 3 cut(s) 456, 498, 1410
TauI GCSGC 1 cut(s) 60
TfiI GAWTC 2 cut(s) 299, 1324
Tru1I TTAA 4 cut(s) 210, 705, 768, 1773
Tru9I TTAA 4 cut(s) 210, 705, 768, 1773
TscAI CASTG 4 cut(s) 166, 1180, 1396, 1432
TseFI GTSAC 4 cut(s) 715, 1436, 1495, 1754
TseI GCWGC 8 cut(s) 62, 667, 806, 887, 890, 1178, 1538, 1736
Tsp45I GTSAC 4 cut(s) 715, 1436, 1495, 1754
TspDTI ATGAA 6 cut(s) 406, 473, 699, 922, 1038, 1495
TspGWI ACGGA 1 cut(s) 861
TspRI CASTG 4 cut(s) 166, 1180, 1396, 1432
Van91I CCANNNNNTGG 1 cut(s) 1431
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 5 cut(s) 445, 508, 556, 1118, 1546
VspI ATTAAT 1 cut(s) 705
XagI CCTNNNNNAGG 1 cut(s) 563
XceI RCATGY 1 cut(s) 1689
XcmI CCANNNNNNNNNTGG 1 cut(s) 824
XmiI GTMKAC 3 cut(s) 429, 596, 1586
XspI CTAG 4 cut(s) 551, 998, 1064, 1535
Zsp2I ATGCAT 1 cut(s) 1691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.