DNA-directed RNA polymerases I, II, and III subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 388 |
| AgsI | TTSAA | 2 cut(s) | 41, 206 |
| AluBI | AGCT | 1 cut(s) | 358 |
| AluI | AGCT | 1 cut(s) | 358 |
| AspA2I | CCTAGG | 1 cut(s) | 5 |
| AsuHPI | GGTGA | 1 cut(s) | 335 |
| AvrII | CCTAGG | 1 cut(s) | 5 |
| BccI | CCATC | 2 cut(s) | 301, 392 |
| BfaI | CTAG | 2 cut(s) | 6, 62 |
| BlnI | CCTAGG | 1 cut(s) | 5 |
| BmsI | GCATC | 2 cut(s) | 187, 300 |
| BpmI | CTGGAG | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 1 cut(s) | 359 |
| BsaJI | CCNNGG | 1 cut(s) | 5 |
| BseDI | CCNNGG | 1 cut(s) | 5 |
| BseGI | GGATG | 2 cut(s) | 288, 384 |
| BseRI | GAGGAG | 3 cut(s) | 120, 173, 176 |
| Bsp143I | GATC | 3 cut(s) | 75, 109, 184 |
| BspACI | CCGC | 1 cut(s) | 388 |
| BssECI | CCNNGG | 1 cut(s) | 5 |
| BssMI | GATC | 3 cut(s) | 75, 109, 184 |
| BssT1I | CCWWGG | 1 cut(s) | 5 |
| Bst4CI | ACNGT | 1 cut(s) | 228 |
| BstF5I | GGATG | 2 cut(s) | 288, 384 |
| BstKTI | GATC | 3 cut(s) | 78, 112, 187 |
| BstMBI | GATC | 3 cut(s) | 75, 109, 184 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BtsCI | GGATG | 2 cut(s) | 288, 384 |
| BtsIMutI | CAGTG | 1 cut(s) | 301 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 3 cut(s) | 67, 329, 358 |
| CviKI_1 | RGCY | 3 cut(s) | 67, 329, 358 |
| DpnI | GATC | 3 cut(s) | 77, 111, 186 |
| DpnII | GATC | 3 cut(s) | 75, 109, 184 |
| DraI | TTTAAA | 1 cut(s) | 52 |
| EciI | GGCGGA | 1 cut(s) | 377 |
| Eco130I | CCWWGG | 1 cut(s) | 5 |
| EcoT14I | CCWWGG | 1 cut(s) | 5 |
| ErhI | CCWWGG | 1 cut(s) | 5 |
| FaeI | CATG | 1 cut(s) | 103 |
| FaiI | YATR | 7 cut(s) | 18, 101, 114, 170, 231, 239, 350 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 362, 394 |
| FatI | CATG | 1 cut(s) | 99 |
| FokI | GGATG | 2 cut(s) | 295, 371 |
| FspBI | CTAG | 2 cut(s) | 6, 62 |
| GsuI | CTGGAG | 1 cut(s) | 213 |
| Hin1II | CATG | 1 cut(s) | 103 |
| HphI | GGTGA | 1 cut(s) | 335 |
| Hpy188I | TCNGA | 2 cut(s) | 75, 87 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 146, 362 |
| HpyCH4III | ACNGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 1 cut(s) | 99 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| Kzo9I | GATC | 3 cut(s) | 75, 109, 184 |
| LpnPI | CCDG | 3 cut(s) | 131, 177, 301 |
| LweI | GCATC | 2 cut(s) | 187, 300 |
| MaeI | CTAG | 2 cut(s) | 6, 62 |
| MalI | GATC | 3 cut(s) | 77, 111, 186 |
| MboI | GATC | 3 cut(s) | 75, 109, 184 |
| MboII | GAAGA | 2 cut(s) | 233, 382 |
| MluCI | AATT | 3 cut(s) | 41, 234, 274 |
| MmeI | TCCRAC | 1 cut(s) | 110 |
| MnlI | CCTC | 9 cut(s) | 81, 98, 121, 151, 154, 157, 310, 313, 319 |
| MseI | TTAA | 1 cut(s) | 51 |
| MslI | CAYNNNNRTG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NdeII | GATC | 3 cut(s) | 75, 109, 184 |
| NlaIII | CATG | 1 cut(s) | 103 |
| RseI | CAYNNNNRTG | 1 cut(s) | 117 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| Sau3AI | GATC | 3 cut(s) | 75, 109, 184 |
| SetI | ASST | 4 cut(s) | 73, 132, 360, 399 |
| SfaNI | GCATC | 2 cut(s) | 187, 300 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 117 |
| SmlI | CTYRAG | 1 cut(s) | 338 |
| SmoI | CTYRAG | 1 cut(s) | 338 |
| Sse9I | AATT | 3 cut(s) | 41, 234, 274 |
| SsiI | CCGC | 1 cut(s) | 388 |
| SspMI | CTAG | 2 cut(s) | 6, 62 |
| StyI | CCWWGG | 1 cut(s) | 5 |
| TaaI | ACNGT | 1 cut(s) | 228 |
| TaqI | TCGA | 1 cut(s) | 126 |
| TasI | AATT | 3 cut(s) | 41, 234, 274 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TscAI | CASTG | 1 cut(s) | 301 |
| TspDTI | ATGAA | 3 cut(s) | 35, 246, 365 |
| TspRI | CASTG | 1 cut(s) | 301 |
| XbaI | TCTAGA | 1 cut(s) | 61 |
| XmaJI | CCTAGG | 1 cut(s) | 5 |
| XspI | CTAG | 2 cut(s) | 6, 62 |