Rorug06G0135200
MADS Family

Agamous-like MADS-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000326
Physical Location & Seq
Reverse (-)
19136892 .. 19139680
2789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0135200.1

Sequence Viewer

Length: 1164 bp
ATGACGACGAATGTGGATTACCGGACAAAGTTACTAGCACTTAAGGAACTGGAAGCTAAAGTAAAGCAAGCACGAGACGAATTGCGGTCCAGAAAGAAGGAATATGAGAAAACCGAAGATGATTTGAAGTCCTTCCAAAGTTCAGGACAGATTGTAGGCGAAGTTCTGTCGCAGCTCGATGATGGACGGGTGTTAGTGAAGGCAAGTAGTGGCCCTCGGTATGTGGTAGGCTGTCGCAGTAAAATCCCCAGAGAAAAACTTACATCGGGCACTCGCGTAGTTTTGGATATCACTACTTTGACCATCATGAGGCCTCTTCCAAGAGAAGTTGATCCAGTTGTGTATAATATGCTTCAAGAAGATCCAGGTAATGTTAGCTACTCTGCTGTGGGAGGTCTATCCGATCAGATACGAGATCTTAGGGAATCTATAGAACTGCCTTTGATGAATCCGGAGCTCTTCCTTAGAGTGGGGATCAAACCTCCCAAGGGTGTTCTTCTCTACGGACCTCCGGGAACAGGAAAGACATTACTGGCTAGAGCAATTGCCAGCAATATAGATGCTAATTTTTTGAAGGTTGTATCAAGCGCAATTGTTGATAAATACATTGGCGAGAGTGCGAGAATGATAAGGGAAATGTTTAATTACGCTCGTGATCACCAGCCGTGTATCATTTTTATGGACGAGATCGATGCTATTGGTGGAGCGCGTTTGAGTGAGGGGACCAGTTCAGACAGAGAAGTGCAGAGAACACTCATGGAGTTGCTTAACCAGTTAGACGGATTTGATCAGCTTGGGAAGGTTAAAATCATAATGGCAACCAATAGACCTGATACTTTAGATTCTGCACTCCTGCGCCCTGGGCGTCTAGACCGAAAGATAGAGATTCCATTGCCTAATGAACAGTCGAGAATGGAAATTCTTAAAATCCATGCTGCTGGGATAGCCAAGCATGGGGAAATTGATTATGAGGCAATTGTCAGGCTTGCTGAGGGCTTTAATGGGGCTGATCTACGGAACATATGTACTGAAGCTGGAATGTTTGCCATACGTGCTGAACGGGATTATGTTGTTCAAGAAGATTTCATGAAGGCTGTCAGAAAATTAAACGATGCCAAGAAGCTCGAGTCCAGGGCTCACTACAATTTTGGGAAAGAAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SRF-TF

Protein Analysis

387

Amino Acids

43.35

Weight (kDa)

7.65

Isoelectric Point (pI)

28.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 52 - 107 7.4e-13 Proteasomal ATPase OB C-terminal domain
RuvB_N PF05496 164 - 231 9.7e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 165 - 298 7.3e-45 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 321 - 364 3.3e-13 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000326)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18650 AT4G02235 AT4G11250 AT5G26865 AT5G26950 AT5G27050 AT5G27070 AT5G27090 AT5G27090 AT5G27580 AT5G27944 AT5G37415 AT5G37415 AT5G38740 AT5G39750 AT5G39810 AT5G40070 AT5G40120 AT5G40220 AT5G41200 AT5G55690 AT5G55690 AT5G58890 AT5G65330
fragaria_vesca FvH4_2g27520 FvH4_3g19300 FvH4_4g07700 FvH4_4g07700 FvH4_4g07700 FvH4_5g27070 FvH4_6g53490 FvH4_7g04141
malus_domestica MD02G1297800.v1.1 MD15G1430800.v1.1 MD17G1250500.v1.1
prunus_persica Prupe.2G110900_v2.0.a1 Prupe.3G148900_v2.0.a1 Prupe.3G306000_v2.0.a1 Prupe.7G030200_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G031800_v2.0.a1 Prupe.7G031800_v2.0.a1 Prupe.7G032000_v2.0.a1
pyrus_communis pycom02g25070 pycom06g01170 pycom09g17250 pycom111g00930 pycom15g38080
rosa_chinensis RchiOBHm_Chr2g0175531 RchiOBHm_Chr5g0016461 RchiOBHm_Chr6g0296351
rosa_laevigata RLG00000002414 RLG00000002417 RLG00000009181 RLG00000011703 RLG00000022336 RLG00000029928 RLG00000029934
rosa_multiflora Rmu_co8046860.1_g000001 Rmu_sc0000215.1_g000011 Rmu_sc0000215.1_g000020 Rmu_sc0000379.1_g000004 Rmu_sc0001478.1_g000006 Rmu_sc0002636.1_g000029 Rmu_sc0009440.1_g000006
rosa_roxburghii Rroxscaffold_2G00077230 Rroxscaffold_3G00241440 Rroxscaffold_5G00345600 Rroxscaffold_7G00171600 Rroxscaffold_7G00178500
rosa_rugosa Rorug02G0585900 Rorug04G0025700 Rorug06G0135200 Rorug06G0261200 Rorug06G0261300 Rorug06G0261400 Rorug07G0173300
rosa_samantha Rh1AG091800 Rh1AG093000 Rh1BG072700 Rh1CG088300 Rh1CG089800 Rh1CG090200 Rh1DG095900 Rh2AG665100 Rh2BG675900 Rh2CG639100 Rh2DG689900 Rh4AG103500 Rh4BG098600 Rh4CG111800 Rh4DG095500 Rh5AG126100 Rh5CG137400 Rh5DG124800 Rh5DG124900 Rh6AG373100 Rh6BG381200 Rh6CG386500 Rh6DG374000 Rh7AG315800 Rh7BG306000 Rh7CG333200 Rh7DG314000 Rh7DG314500
rosa_wichuraiana Rw2G054520 Rw4G008380 Rw5G010930 Rw6G032530 Rw7G026670 Rw7G026760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 276, 709
AccIII TCCGGA 1 cut(s) 451
AciI CCGC 1 cut(s) 85
AclWI GGATC 3 cut(s) 326, 356, 482
AcsI RAATTY 1 cut(s) 918
AcuI CTGAAG 1 cut(s) 1050
AcyI GRCGYC 1 cut(s) 865
AfaI GTAC 1 cut(s) 1027
AfiI CCNNNNNNNGG 5 cut(s) 309, 469, 488, 518, 954
AflII CTTAAG 1 cut(s) 41
AgsI TTSAA 4 cut(s) 127, 356, 574, 1076
AjnI CCWGG 3 cut(s) 364, 859, 1130
AluBI AGCT 7 cut(s) 56, 175, 378, 457, 793, 1034, 1123
AluI AGCT 7 cut(s) 56, 175, 378, 457, 793, 1034, 1123
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 1 cut(s) 69
AlwI GGATC 3 cut(s) 326, 356, 482
Ama87I CYCGRG 1 cut(s) 1124
Aor13HI TCCGGA 1 cut(s) 451
AoxI GGCC 2 cut(s) 211, 311
ApeKI GCWGC 2 cut(s) 172, 935
ApoI RAATTY 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 131
AspLEI GCGC 3 cut(s) 590, 709, 858
AspS9I GGNCC 4 cut(s) 87, 212, 506, 723
AsuC2I CCSGG 1 cut(s) 513
AsuHPI GGTGA 1 cut(s) 650
AvaI CYCGRG 1 cut(s) 1124
AvaII GGWCC 3 cut(s) 87, 506, 723
BaeGI GKGCMC 1 cut(s) 272
BanII GRGCYC 2 cut(s) 459, 1138
BauI CACGAG 2 cut(s) 72, 651
Bbv12I GWGCWC 1 cut(s) 459
BbvCI CCTCAGC 1 cut(s) 990
BbvI GCAGC 2 cut(s) 184, 922
BccI CCATC 2 cut(s) 176, 311
BceAI ACGGC 1 cut(s) 649
BcgI CGANNNNNNTGC 2 cut(s) 674, 708
BciT130I CCWGG 3 cut(s) 366, 861, 1132
BclI TGATCA 2 cut(s) 655, 787
BcnI CCSGG 1 cut(s) 513
BcoDI GTCTC 1 cut(s) 69
BfaI CTAG 3 cut(s) 35, 537, 869
BfmI CTRYAG 1 cut(s) 429
BfrI CTTAAG 1 cut(s) 41
BglII AGATCT 1 cut(s) 415
BisI GCNGC 2 cut(s) 173, 936
BlsI GCNGC 2 cut(s) 174, 937
Bme1390I CCNGG 4 cut(s) 366, 513, 861, 1132
Bme18I GGWCC 3 cut(s) 87, 506, 723
BmeT110I CYCGRG 1 cut(s) 1124
BmgT120I GGNCC 4 cut(s) 87, 212, 506, 723
BmiI GGNNCC 1 cut(s) 724
BmrFI CCNGG 4 cut(s) 366, 513, 861, 1132
BmsI GCATC 3 cut(s) 550, 682, 1102
Bpu10I CCTNAGC 1 cut(s) 990
BpuMI CCSGG 1 cut(s) 513
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 1 cut(s) 1052
BsaHI GRCGYC 1 cut(s) 865
BsaJI CCNNGG 5 cut(s) 215, 486, 859, 860, 1131
BsaWI WCCGGW 2 cut(s) 21, 451
Bsc4I CCNNNNNNNGG 5 cut(s) 309, 469, 488, 518, 954
Bse1I ACTGG 5 cut(s) 54, 335, 537, 726, 772
Bse3DI GCAATG 1 cut(s) 890
BseAI TCCGGA 1 cut(s) 451
BseBI CCWGG 3 cut(s) 366, 861, 1132
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 5 cut(s) 215, 486, 859, 860, 1131
BseLI CCNNNNNNNGG 5 cut(s) 309, 469, 488, 518, 954
BseMI GCAATG 1 cut(s) 890
BseMII CTCAG 1 cut(s) 981
BseNI ACTGG 5 cut(s) 54, 335, 537, 726, 772
BseSI GKGCMC 1 cut(s) 272
BseXI GCAGC 2 cut(s) 184, 922
BseYI CCCAGC 1 cut(s) 938
BsgI GTGCAG 2 cut(s) 764, 831
Bsh1236I CGCG 2 cut(s) 276, 709
BshFI GGCC 2 cut(s) 213, 313
BshVI ATCGAT 1 cut(s) 690
BsiHKAI GWGCWC 1 cut(s) 459
BsiHKCI CYCGRG 1 cut(s) 1124
BsiSI CCGG 3 cut(s) 22, 452, 512
BslFI GGGAC 1 cut(s) 736
BslI CCNNNNNNNGG 5 cut(s) 309, 469, 488, 518, 954
BsmAI GTCTC 1 cut(s) 69
BsmBI CGTCTC 1 cut(s) 69
BsmFI GGGAC 1 cut(s) 736
BsnI GGCC 2 cut(s) 213, 313
BsoBI CYCGRG 1 cut(s) 1124
Bsp1286I GDGCHC 3 cut(s) 272, 459, 1138
Bsp13I TCCGGA 1 cut(s) 451
Bsp143I GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
BspACI CCGC 1 cut(s) 85
BspANI GGCC 2 cut(s) 213, 313
BspCNI CTCAG 1 cut(s) 982
BspDI ATCGAT 1 cut(s) 690
BspEI TCCGGA 1 cut(s) 451
BspFNI CGCG 2 cut(s) 276, 709
BspHI TCATGA 2 cut(s) 306, 1086
BspLI GGNNCC 1 cut(s) 724
BspPI GGATC 3 cut(s) 326, 356, 482
BspQI GCTCTTC 1 cut(s) 464
BspTI CTTAAG 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 890
BsrI ACTGG 5 cut(s) 54, 335, 537, 726, 772
BssECI CCNNGG 5 cut(s) 215, 486, 859, 860, 1131
BssMI GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
BssNI GRCGYC 1 cut(s) 865
BssSI CACGAG 2 cut(s) 72, 651
BssT1I CCWWGG 1 cut(s) 486
Bst2BI CACGAG 2 cut(s) 72, 651
Bst2UI CCWGG 3 cut(s) 366, 861, 1132
Bst4CI ACNGT 1 cut(s) 906
Bst6I CTCTTC 2 cut(s) 321, 464
BstACI GRCGYC 1 cut(s) 865
BstAFI CTTAAG 1 cut(s) 41
BstBAI YACGTR 1 cut(s) 1052
BstC8I GCNNGC 3 cut(s) 69, 550, 987
BstDEI CTNAG 3 cut(s) 419, 464, 990
BstFNI CGCG 2 cut(s) 276, 709
BstHHI GCGC 3 cut(s) 590, 709, 858
BstKTI GATC 9 cut(s) 334, 364, 406, 418, 477, 658, 690, 790, 1012
BstMAI GTCTC 1 cut(s) 69
BstMBI GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
BstMWI GCNNNNNNNGC 3 cut(s) 862, 944, 1052
BstNI CCWGG 3 cut(s) 366, 861, 1132
BstSCI CCNGG 4 cut(s) 364, 511, 859, 1130
BstSFI CTRYAG 1 cut(s) 429
BstSLI GKGCMC 1 cut(s) 272
BstUI CGCG 2 cut(s) 276, 709
BstV1I GCAGC 2 cut(s) 184, 922
BstX2I RGATCY 2 cut(s) 361, 415
BstXI CCANNNNNNTGG 1 cut(s) 938
BstYI RGATCY 2 cut(s) 361, 415
Bsu15I ATCGAT 1 cut(s) 690
BsuRI GGCC 2 cut(s) 213, 313
BsuTUI ATCGAT 1 cut(s) 690
Cac8I GCNNGC 3 cut(s) 69, 550, 987
CciI TCATGA 2 cut(s) 306, 1086
CfoI GCGC 3 cut(s) 590, 709, 858
Cfr13I GGNCC 4 cut(s) 87, 212, 506, 723
ClaI ATCGAT 1 cut(s) 690
CseI GACGC 1 cut(s) 854
Csp6I GTAC 1 cut(s) 1026
CviAII CATG 5 cut(s) 307, 757, 932, 953, 1087
CviQI GTAC 1 cut(s) 1026
DdeI CTNAG 3 cut(s) 419, 464, 990
DpnI GATC 9 cut(s) 333, 363, 405, 417, 476, 657, 689, 789, 1011
DpnII GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
Eam1104I CTCTTC 2 cut(s) 321, 464
EarI CTCTTC 2 cut(s) 321, 464
Ecl136II GAGCTC 1 cut(s) 457
Eco130I CCWWGG 1 cut(s) 486
Eco147I AGGCCT 1 cut(s) 313
Eco24I GRGCYC 2 cut(s) 459, 1138
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 3 cut(s) 87, 506, 723
Eco53kI GAGCTC 1 cut(s) 457
Eco57I CTGAAG 1 cut(s) 1050
Eco88I CYCGRG 1 cut(s) 1124
EcoICRI GAGCTC 1 cut(s) 457
EcoRII CCWGG 3 cut(s) 364, 859, 1130
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 1 cut(s) 486
EcoT38I GRGCYC 2 cut(s) 459, 1138
ErhI CCWWGG 1 cut(s) 486
Esp3I CGTCTC 1 cut(s) 69
FaeI CATG 5 cut(s) 310, 760, 935, 956, 1090
FaqI GGGAC 1 cut(s) 736
FatI CATG 5 cut(s) 306, 756, 931, 952, 1086
FauNDI CATATG 1 cut(s) 1022
FbaI TGATCA 2 cut(s) 655, 787
Fnu4HI GCNGC 2 cut(s) 173, 936
FriOI GRGCYC 2 cut(s) 459, 1138
Fsp4HI GCNGC 2 cut(s) 173, 936
FspBI CTAG 3 cut(s) 35, 537, 869
GlaI GCGC 3 cut(s) 589, 708, 857
GluI GCNGC 2 cut(s) 173, 936
GsaI CCCAGC 1 cut(s) 942
HaeIII GGCC 2 cut(s) 213, 313
HapII CCGG 3 cut(s) 22, 452, 512
HgaI GACGC 1 cut(s) 854
HhaI GCGC 3 cut(s) 590, 709, 858
Hin1I GRCGYC 1 cut(s) 865
Hin1II CATG 5 cut(s) 310, 760, 935, 956, 1090
Hin6I GCGC 3 cut(s) 588, 707, 856
HinP1I GCGC 3 cut(s) 588, 707, 856
HinfI GANTC 5 cut(s) 425, 448, 842, 886, 1127
HpaII CCGG 3 cut(s) 22, 452, 512
HphI GGTGA 1 cut(s) 650
Hpy188I TCNGA 4 cut(s) 403, 408, 733, 1100
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 6 cut(s) 91, 142, 193, 568, 793, 1084
HpyCH4III ACNGT 1 cut(s) 906
HpyCH4IV ACGT 1 cut(s) 1051
HpyCH4V TGCA 2 cut(s) 745, 848
HpyF10VI GCNNNNNNNGC 3 cut(s) 862, 944, 1052
HpyF3I CTNAG 3 cut(s) 419, 464, 990
HpySE526I ACGT 1 cut(s) 1051
Hsp92I GRCGYC 1 cut(s) 865
Hsp92II CATG 5 cut(s) 310, 760, 935, 956, 1090
HspAI GCGC 3 cut(s) 588, 707, 856
Kpn2I TCCGGA 1 cut(s) 451
Ksp22I TGATCA 2 cut(s) 655, 787
Kzo9I GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
LguI GCTCTTC 1 cut(s) 464
LmnI GCTCC 2 cut(s) 454, 704
Lsp1109I GCAGC 2 cut(s) 184, 922
LweI GCATC 3 cut(s) 550, 682, 1102
MaeI CTAG 3 cut(s) 35, 537, 869
MaeII ACGT 1 cut(s) 1051
MaeIII GTNAC 1 cut(s) 30
MalI GATC 9 cut(s) 333, 363, 405, 417, 476, 657, 689, 789, 1011
MboI GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
MboII GAAGA 6 cut(s) 128, 308, 371, 451, 488, 1091
MfeI CAATTG 3 cut(s) 543, 591, 975
MflI RGATCY 2 cut(s) 361, 415
MhlI GDGCHC 3 cut(s) 272, 459, 1138
MlyI GAGTC 1 cut(s) 1136
MnlI CCTC 9 cut(s) 225, 303, 324, 386, 492, 519, 712, 964, 985
MroI TCCGGA 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 131
MseI TTAA 7 cut(s) 42, 642, 768, 804, 924, 999, 1106
MslI CAYNNNNRTG 1 cut(s) 677
MspCI CTTAAG 1 cut(s) 41
MspI CCGG 3 cut(s) 22, 452, 512
MspR9I CCNGG 4 cut(s) 366, 513, 861, 1132
MunI CAATTG 3 cut(s) 543, 591, 975
MvaI CCWGG 3 cut(s) 366, 861, 1132
MvnI CGCG 2 cut(s) 276, 709
MwoI GCNNNNNNNGC 3 cut(s) 862, 944, 1052
NciI CCSGG 1 cut(s) 513
NdeI CATATG 1 cut(s) 1022
NdeII GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
NlaIII CATG 5 cut(s) 310, 760, 935, 956, 1090
NlaIV GGNNCC 1 cut(s) 724
PaeR7I CTCGAG 1 cut(s) 1124
PagI TCATGA 2 cut(s) 306, 1086
PasI CCCWGGG 1 cut(s) 860
PceI AGGCCT 1 cut(s) 313
PciSI GCTCTTC 1 cut(s) 464
PdmI GAANNNNTTC 1 cut(s) 131
PfeI GAWTC 4 cut(s) 425, 448, 842, 886
PfoI TCCNGGA 1 cut(s) 511
PkrI GCNGC 2 cut(s) 174, 937
PleI GAGTC 1 cut(s) 1135
PpsI GAGTC 1 cut(s) 1135
Ppu21I YACGTR 1 cut(s) 1052
Psp124BI GAGCTC 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 364, 859, 1130
PspFI CCCAGC 1 cut(s) 938
PspGI CCWGG 3 cut(s) 364, 859, 1130
PspN4I GGNNCC 1 cut(s) 724
PspPI GGNCC 4 cut(s) 87, 212, 506, 723
PspXI VCTCGAGB 1 cut(s) 1124
PsrI GAACNNNNNNTAC 2 cut(s) 147, 179
PsuI RGATCY 2 cut(s) 361, 415
RsaI GTAC 1 cut(s) 1027
RsaNI GTAC 1 cut(s) 1026
RseI CAYNNNNRTG 1 cut(s) 677
SacI GAGCTC 1 cut(s) 459
SapI GCTCTTC 1 cut(s) 464
SaqAI TTAA 7 cut(s) 42, 642, 768, 804, 924, 999, 1106
SatI GCNGC 2 cut(s) 173, 936
Sau3AI GATC 9 cut(s) 331, 361, 403, 415, 474, 655, 687, 787, 1009
Sau96I GGNCC 4 cut(s) 87, 212, 506, 723
SchI GAGTC 1 cut(s) 1136
ScrFI CCNGG 4 cut(s) 366, 513, 861, 1132
SduI GDGCHC 3 cut(s) 272, 459, 1138
SfaNI GCATC 3 cut(s) 550, 682, 1102
SfcI CTRYAG 1 cut(s) 429
Sfr274I CTCGAG 1 cut(s) 1124
SinI GGWCC 3 cut(s) 87, 506, 723
SlaI CTCGAG 1 cut(s) 1124
SmiMI CAYNNNNRTG 1 cut(s) 677
SmlI CTYRAG 2 cut(s) 41, 1124
SmoI CTYRAG 2 cut(s) 41, 1124
SseBI AGGCCT 1 cut(s) 313
SsiI CCGC 1 cut(s) 85
SspMI CTAG 3 cut(s) 35, 537, 869
SstI GAGCTC 1 cut(s) 459
StuI AGGCCT 1 cut(s) 313
StyD4I CCNGG 4 cut(s) 364, 511, 859, 1130
StyI CCWWGG 1 cut(s) 486
TaaI ACNGT 1 cut(s) 906
TaiI ACGT 1 cut(s) 1054
TaqI TCGA 4 cut(s) 177, 690, 908, 1125
TaqII GACCGA 1 cut(s) 888
TatI WGTACW 1 cut(s) 1025
TfiI GAWTC 4 cut(s) 425, 448, 842, 886
Tru1I TTAA 7 cut(s) 42, 642, 768, 804, 924, 999, 1106
Tru9I TTAA 7 cut(s) 42, 642, 768, 804, 924, 999, 1106
TseI GCWGC 2 cut(s) 172, 935
TspDTI ATGAA 4 cut(s) 461, 915, 1075, 1103
TspGWI ACGGA 3 cut(s) 519, 795, 1030
Vha464I CTTAAG 1 cut(s) 41
VpaK11BI GGWCC 3 cut(s) 87, 506, 723
XapI RAATTY 1 cut(s) 918
XbaI TCTAGA 1 cut(s) 868
XhoI CTCGAG 1 cut(s) 1124
XmnI GAANNNNTTC 1 cut(s) 131
XspI CTAG 3 cut(s) 35, 537, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.