Rh2BG675900
MADS Family

Agamous-like MADS-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000326
Physical Location & Seq
Forward (+)
88711262 .. 88717107
5846 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG675900.1

Sequence Viewer

Length: 1467 bp
ATGTCAAATTTTAACGACCAGGTTGGGCTCGGGTTTGAAGTTATATATATTCTCAAGCCCGCCCCATCAAAAACATTGGACAGGGCCGGGTCACCAAGAGACAAGCTAAACGGCGTCGTCCTCTTTCTAATATGTATACTTCATCCACTTTCCTTCTTCTCTGAGTCTGTGACCAACAGTAGTAGAGACGCTGCAAATTTCTCAGTCCCCGATAGACTAAAAACCATGAGGAAATCGGTGAATCGTCAGTCGACGCCGGATGTTGAGGAGAATCAAGAAGACAAGGAGCCCAGTTTCCAAGAGCTCATCAACATCGAGTTGATTGAGAGCGGTGAAAAGGAGCGGTTAATGGAGCTACTGAGGGAGAGGCTAATTGAGTGTGGGTGGAAGGATGAAATGAAAGCTCTTTGCAGGTCATTCATAAAGAAAAAAGGAAGGAACAATGTTACTGTGGATGACCTTGTACATGTAATCACCCCAAAGGGCAGAGCCTCCATTCCTGATTCCGTAAAGGCAGAGCTTTTGCAAAGGATTCGATTCTACAAGATCATGGGTCGAAGTAATACAAAGTTGCCTCTGGAACTAATAAAGAATGAAAAGTCTCGCAATGTCACTTTTCGAAAGAGGAAGAAGGGATTGATGAAGAAGACGTATGAATTGAACAAGCTTTGTGATGTGCAGTGTTCTGTTATCATTTATGAGAACAAAAACGGCCAACTGGTCCGGCCGGATACCTATCCTGAAAACCCTGAAGAGGTCAAGCAAATTATTGATAGATTTGTCTCCAAATCAGCCAAAGTAAGGAAAGTTGAAAACTTGGCTGATTTTTTCAGCAAACAAATCATGCAAGTGAAGAAAGAGACTGCCAAATTGCGCCAAAAGAACAATGAAGCTCGGTTTCCTTCATGGGATGACAGGTTAGATGACTTCTCATTAGATCAATTGCTTGCTCTTTTGAAAAAACTGGAGCACAAAATCGAAGACGTGCACAAGCATTATGATAAGCAATATGCTATTGATGACAGTATACTACAACAAACGGCTTTGTTTCCGAACAACAACGTAGACTATTCGCAGATGGTTGCATTGAACCAATACCCTACTAGTGGTTCGATGATGTACACAAGTGATAGGGCTTTGCCTGAAGAACAAACTAATCTCCAAGGCTTGTTTCAGAACAACCTAATCAATTATCACCAGAATTACAATTACTGTTCTATCACGATGAACAACAGAAACGGCATGCCATGGCAGAACTACAACATTCAGAGTGATCCATCAGCATCAAACGGATCAAATTACGACGAACAAAGTACATCTATGAAGTGTGAAAATCGTCTGCAATACGGAAACATCGATGAAAATTTGACATTATGTAATCACGTCCCACCACAACAGACTGTGTATCCAATGTCCGCAAGTTATTTGTTTGATAATGCAAACCAATTCTTGCATCTCAAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SRF-TF

Protein Analysis

488

Amino Acids

56.49

Weight (kDa)

8.54

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EnY2 PF10163 102 - 180 6.9e-29 Transcription factor e(y)2
SRF-TF PF00319 196 - 240 3.8e-16 SRF-type transcription factor (DNA-binding and dimerisation domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000326)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18650 AT4G02235 AT4G11250 AT5G26865 AT5G26950 AT5G27050 AT5G27070 AT5G27090 AT5G27090 AT5G27580 AT5G27944 AT5G37415 AT5G37415 AT5G38740 AT5G39750 AT5G39810 AT5G40070 AT5G40120 AT5G40220 AT5G41200 AT5G55690 AT5G55690 AT5G58890 AT5G65330
fragaria_vesca FvH4_2g27520 FvH4_3g19300 FvH4_4g07700 FvH4_4g07700 FvH4_4g07700 FvH4_5g27070 FvH4_6g53490 FvH4_7g04141
malus_domestica MD02G1297800.v1.1 MD15G1430800.v1.1 MD17G1250500.v1.1
prunus_persica Prupe.2G110900_v2.0.a1 Prupe.3G148900_v2.0.a1 Prupe.3G306000_v2.0.a1 Prupe.7G030200_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G030800_v2.0.a1 Prupe.7G031800_v2.0.a1 Prupe.7G031800_v2.0.a1 Prupe.7G032000_v2.0.a1
pyrus_communis pycom02g25070 pycom06g01170 pycom09g17250 pycom111g00930 pycom15g38080
rosa_chinensis RchiOBHm_Chr2g0175531 RchiOBHm_Chr5g0016461 RchiOBHm_Chr6g0296351
rosa_laevigata RLG00000002414 RLG00000002417 RLG00000009181 RLG00000011703 RLG00000022336 RLG00000029928 RLG00000029934
rosa_multiflora Rmu_co8046860.1_g000001 Rmu_sc0000215.1_g000011 Rmu_sc0000215.1_g000020 Rmu_sc0000379.1_g000004 Rmu_sc0001478.1_g000006 Rmu_sc0002636.1_g000029 Rmu_sc0009440.1_g000006
rosa_roxburghii Rroxscaffold_2G00077230 Rroxscaffold_3G00241440 Rroxscaffold_5G00345600 Rroxscaffold_7G00171600 Rroxscaffold_7G00178500
rosa_rugosa Rorug02G0585900 Rorug04G0025700 Rorug06G0135200 Rorug06G0261200 Rorug06G0261300 Rorug06G0261400 Rorug07G0173300
rosa_samantha Rh1AG091800 Rh1AG093000 Rh1BG072700 Rh1CG088300 Rh1CG089800 Rh1CG090200 Rh1DG095900 Rh2AG665100 Rh2BG675900 Rh2CG639100 Rh2DG689900 Rh4AG103500 Rh4BG098600 Rh4CG111800 Rh4DG095500 Rh5AG126100 Rh5CG137400 Rh5DG124800 Rh5DG124900 Rh6AG373100 Rh6BG381200 Rh6CG386500 Rh6DG374000 Rh7AG315800 Rh7BG306000 Rh7CG333200 Rh7DG314000 Rh7DG314500
rosa_wichuraiana Rw2G054520 Rw4G008380 Rw5G010930 Rw6G032530 Rw7G026670 Rw7G026760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 402
AccBSI CCGCTC 2 cut(s) 330, 343
AccI GTMKAC 4 cut(s) 136, 251, 1027, 1065
AciI CCGC 4 cut(s) 60, 330, 343, 1416
AclWI GGATC 2 cut(s) 1268, 1300
AcoI YGGCCR 2 cut(s) 712, 725
AcsI RAATTY 3 cut(s) 7, 196, 1363
AcuI CTGAAG 2 cut(s) 771, 1164
AcyI GRCGYC 2 cut(s) 114, 254
AfaI GTAC 3 cut(s) 465, 1121, 1315
AfiI CCNNNNNNNGG 3 cut(s) 754, 801, 1106
AflIII ACRYGT 1 cut(s) 466
AgsI TTSAA 5 cut(s) 38, 661, 812, 958, 1090
AhlI ACTAGT 1 cut(s) 1103
AjiI CACGTC 2 cut(s) 985, 1384
AjnI CCWGG 1 cut(s) 18
AjuI GAANNNNNNNTTGG 2 cut(s) 1155, 1187
AluBI AGCT 7 cut(s) 106, 304, 355, 404, 520, 667, 893
AluI AGCT 7 cut(s) 106, 304, 355, 404, 520, 667, 893
Alw21I GWGCWC 3 cut(s) 306, 972, 990
Alw26I GTCTC 5 cut(s) 93, 180, 606, 787, 854
Alw44I GTGCAC 1 cut(s) 986
AlwI GGATC 2 cut(s) 1268, 1300
Ama87I CYCGRG 1 cut(s) 29
AoxI GGCC 3 cut(s) 84, 712, 725
ApaLI GTGCAC 1 cut(s) 986
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 3 cut(s) 7, 196, 1363
AspLEI GCGC 1 cut(s) 876
AspS9I GGNCC 2 cut(s) 84, 721
AsuC2I CCSGG 1 cut(s) 88
AsuHPI GGTGA 5 cut(s) 84, 250, 344, 466, 1187
AsuII TTCGAA 1 cut(s) 619
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 1 cut(s) 721
BaeGI GKGCMC 1 cut(s) 990
BanII GRGCYC 3 cut(s) 30, 291, 306
BbsI GAAGAC 3 cut(s) 285, 653, 987
Bbv12I GWGCWC 3 cut(s) 306, 972, 990
BbvI GCAGC 1 cut(s) 178
BccI CCATC 3 cut(s) 73, 1072, 1285
BceAI ACGGC 4 cut(s) 127, 727, 1056, 1255
BcgI CGANNNNNNTGC 2 cut(s) 515, 549
BciT130I CCWGG 1 cut(s) 20
BciVI GTATCC 2 cut(s) 724, 1416
BcnI CCSGG 1 cut(s) 88
BcoDI GTCTC 5 cut(s) 93, 180, 606, 787, 854
BcuI ACTAGT 1 cut(s) 1103
BfaI CTAG 2 cut(s) 1104, 1465
BfuAI ACCTGC 1 cut(s) 402
BfuI GTATCC 2 cut(s) 724, 1416
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
Bme1390I CCNGG 2 cut(s) 20, 88
Bme18I GGWCC 1 cut(s) 721
BmeT110I CYCGRG 1 cut(s) 29
BmgBI CACGTC 2 cut(s) 985, 1384
BmgT120I GGNCC 2 cut(s) 84, 721
BmiI GGNNCC 1 cut(s) 288
BmrFI CCNGG 2 cut(s) 20, 88
BmrI ACTGGG 1 cut(s) 285
BmsI GCATC 2 cut(s) 1292, 1462
BmuI ACTGGG 1 cut(s) 285
BpiI GAAGAC 3 cut(s) 285, 653, 987
BpmI CTGGAG 1 cut(s) 986
Bpu14I TTCGAA 1 cut(s) 619
BpuEI CTTGAG 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 88
Bsa29I ATCGAT 1 cut(s) 1356
BsaBI GATNNNNATC 1 cut(s) 735
BsaHI GRCGYC 2 cut(s) 114, 254
BsaJI CCNNGG 2 cut(s) 1162, 1247
Bsc4I CCNNNNNNNGG 3 cut(s) 754, 801, 1106
Bse1I ACTGG 3 cut(s) 291, 723, 969
Bse3DI GCAATG 1 cut(s) 613
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 1 cut(s) 20
BseCI ATCGAT 1 cut(s) 1356
BseDI CCNNGG 2 cut(s) 1162, 1247
BseGI GGATG 5 cut(s) 142, 265, 397, 460, 916
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 3 cut(s) 754, 801, 1106
BseMI GCAATG 1 cut(s) 613
BseMII CTCAG 3 cut(s) 153, 216, 350
BseNI ACTGG 3 cut(s) 291, 723, 969
BseRI GAGGAG 1 cut(s) 281
BseSI GKGCMC 1 cut(s) 990
BseX3I CGGCCG 1 cut(s) 725
BseXI GCAGC 1 cut(s) 178
BsgI GTGCAG 1 cut(s) 698
Bsh1285I CGRYCG 1 cut(s) 728
BshFI GGCC 3 cut(s) 86, 714, 727
BshVI ATCGAT 1 cut(s) 1356
BsiEI CGRYCG 1 cut(s) 728
BsiHKAI GWGCWC 3 cut(s) 306, 972, 990
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 4 cut(s) 87, 257, 724, 728
BslFI GGGAC 2 cut(s) 191, 1370
BslI CCNNNNNNNGG 3 cut(s) 754, 801, 1106
BsmAI GTCTC 5 cut(s) 93, 180, 606, 787, 854
BsmBI CGTCTC 1 cut(s) 180
BsmFI GGGAC 2 cut(s) 191, 1370
BsnI GGCC 3 cut(s) 86, 714, 727
BsoBI CYCGRG 1 cut(s) 29
Bsp119I TTCGAA 1 cut(s) 619
Bsp1286I GDGCHC 5 cut(s) 30, 291, 306, 972, 990
Bsp1407I TGTACA 2 cut(s) 463, 1119
Bsp143I GATC 4 cut(s) 546, 937, 1273, 1292
Bsp19I CCATGG 1 cut(s) 1247
BspACI CCGC 4 cut(s) 60, 330, 343, 1416
BspANI GGCC 3 cut(s) 86, 714, 727
BspCNI CTCAG 3 cut(s) 154, 215, 351
BspDI ATCGAT 1 cut(s) 1356
BspLI GGNNCC 1 cut(s) 288
BspMI ACCTGC 1 cut(s) 402
BspPI GGATC 2 cut(s) 1268, 1300
BspT104I TTCGAA 1 cut(s) 619
BsrBI CCGCTC 2 cut(s) 330, 343
BsrDI GCAATG 1 cut(s) 613
BsrGI TGTACA 2 cut(s) 463, 1119
BsrI ACTGG 3 cut(s) 291, 723, 969
BssECI CCNNGG 2 cut(s) 1162, 1247
BssMI GATC 4 cut(s) 546, 937, 1273, 1292
BssNAI GTATAC 2 cut(s) 137, 1028
BssNI GRCGYC 2 cut(s) 114, 254
BssT1I CCWWGG 2 cut(s) 1162, 1247
Bst1107I GTATAC 2 cut(s) 137, 1028
Bst2UI CCWGG 1 cut(s) 20
Bst4CI ACNGT 5 cut(s) 179, 451, 1025, 1214, 1402
Bst6I CTCTTC 1 cut(s) 747
BstACI GRCGYC 2 cut(s) 114, 254
BstAUI TGTACA 2 cut(s) 463, 1119
BstBI TTCGAA 1 cut(s) 619
BstC8I GCNNGC 3 cut(s) 60, 948, 1244
BstDEI CTNAG 3 cut(s) 162, 202, 359
BstDSI CCRYGG 1 cut(s) 1247
BstEII GGTNACC 1 cut(s) 90
BstF5I GGATG 5 cut(s) 142, 265, 397, 460, 916
BstHHI GCGC 1 cut(s) 876
BstKTI GATC 4 cut(s) 549, 940, 1276, 1295
BstMAI GTCTC 5 cut(s) 93, 180, 606, 787, 854
BstMBI GATC 4 cut(s) 546, 937, 1273, 1292
BstMCI CGRYCG 1 cut(s) 728
BstNI CCWGG 1 cut(s) 20
BstNSI RCATGY 2 cut(s) 470, 1246
BstPI GGTNACC 1 cut(s) 90
BstSCI CCNGG 2 cut(s) 18, 86
BstSLI GKGCMC 1 cut(s) 990
BstV1I GCAGC 1 cut(s) 178
BstV2I GAAGAC 3 cut(s) 285, 653, 987
BstZ17I GTATAC 2 cut(s) 137, 1028
BstZI CGGCCG 1 cut(s) 725
Bsu15I ATCGAT 1 cut(s) 1356
BsuI GTATCC 2 cut(s) 724, 1416
BsuRI GGCC 3 cut(s) 86, 714, 727
BsuTUI ATCGAT 1 cut(s) 1356
BtgI CCRYGG 1 cut(s) 1247
BtrI CACGTC 2 cut(s) 985, 1384
BtsCI GGATG 5 cut(s) 142, 265, 397, 460, 916
BtsI GCAGTG 1 cut(s) 686
BtsIMutI CAGTG 1 cut(s) 686
BveI ACCTGC 1 cut(s) 402
Cac8I GCNNGC 3 cut(s) 60, 948, 1244
CfoI GCGC 1 cut(s) 876
Cfr13I GGNCC 2 cut(s) 84, 721
ClaI ATCGAT 1 cut(s) 1356
CseI GACGC 3 cut(s) 103, 197, 262
CsiI ACCWGGT 1 cut(s) 18
Csp6I GTAC 3 cut(s) 464, 1120, 1314
CviAII CATG 7 cut(s) 226, 467, 550, 844, 906, 1243, 1248
CviQI GTAC 3 cut(s) 464, 1120, 1314
DdeI CTNAG 3 cut(s) 162, 202, 359
DpnI GATC 4 cut(s) 548, 939, 1275, 1294
DpnII GATC 4 cut(s) 546, 937, 1273, 1292
EaeI YGGCCR 2 cut(s) 712, 725
EagI CGGCCG 1 cut(s) 725
Eam1104I CTCTTC 1 cut(s) 747
EarI CTCTTC 1 cut(s) 747
Ecl136II GAGCTC 1 cut(s) 304
EclXI CGGCCG 1 cut(s) 725
Eco130I CCWWGG 2 cut(s) 1162, 1247
Eco24I GRGCYC 3 cut(s) 30, 291, 306
Eco47I GGWCC 1 cut(s) 721
Eco52I CGGCCG 1 cut(s) 725
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 2 cut(s) 771, 1164
Eco88I CYCGRG 1 cut(s) 29
Eco91I GGTNACC 1 cut(s) 90
EcoICRI GAGCTC 1 cut(s) 304
EcoO65I GGTNACC 1 cut(s) 90
EcoRII CCWGG 1 cut(s) 18
EcoT14I CCWWGG 2 cut(s) 1162, 1247
EcoT38I GRGCYC 3 cut(s) 30, 291, 306
ErhI CCWWGG 2 cut(s) 1162, 1247
Esp3I CGTCTC 1 cut(s) 180
FaeI CATG 7 cut(s) 229, 470, 553, 847, 909, 1246, 1251
FaqI GGGAC 2 cut(s) 191, 1370
FatI CATG 7 cut(s) 225, 466, 549, 843, 905, 1242, 1247
FauI CCCGC 1 cut(s) 67
FblI GTMKAC 4 cut(s) 136, 251, 1027, 1065
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 5 cut(s) 129, 272, 404, 467, 923
FriOI GRGCYC 3 cut(s) 30, 291, 306
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 2 cut(s) 1104, 1465
GlaI GCGC 1 cut(s) 875
GluI GCNGC 1 cut(s) 192
GsuI CTGGAG 1 cut(s) 986
HaeIII GGCC 3 cut(s) 86, 714, 727
HapII CCGG 4 cut(s) 87, 257, 724, 728
HgaI GACGC 3 cut(s) 103, 197, 262
HhaI GCGC 1 cut(s) 876
Hin1I GRCGYC 2 cut(s) 114, 254
Hin1II CATG 7 cut(s) 229, 470, 553, 847, 909, 1246, 1251
Hin6I GCGC 1 cut(s) 874
HinP1I GCGC 1 cut(s) 874
HincII GTYRAC 1 cut(s) 252
HindII GTYRAC 1 cut(s) 252
HindIII AAGCTT 1 cut(s) 665
HinfI GANTC 6 cut(s) 164, 241, 271, 503, 532, 537
HpaII CCGG 4 cut(s) 87, 257, 724, 728
HphI GGTGA 5 cut(s) 84, 250, 344, 466, 1187
Hpy166II GTNNAC 6 cut(s) 137, 252, 988, 1028, 1066, 1122
Hpy188I TCNGA 4 cut(s) 163, 1053, 1176, 1269
Hpy188III TCNNGA 5 cut(s) 275, 500, 578, 740, 1222
Hpy8I GTNNAC 6 cut(s) 137, 252, 988, 1028, 1066, 1122
Hpy99I CGWCG 3 cut(s) 119, 256, 1307
HpyAV CCTTC 5 cut(s) 163, 382, 429, 625, 912
HpyCH4III ACNGT 5 cut(s) 179, 451, 1025, 1214, 1402
HpyCH4IV ACGT 4 cut(s) 650, 984, 1062, 1383
HpyF3I CTNAG 3 cut(s) 162, 202, 359
HpySE526I ACGT 4 cut(s) 650, 984, 1062, 1383
Hsp92I GRCGYC 2 cut(s) 114, 254
Hsp92II CATG 7 cut(s) 229, 470, 553, 847, 909, 1246, 1251
HspAI GCGC 1 cut(s) 874
Kzo9I GATC 4 cut(s) 546, 937, 1273, 1292
LmnI GCTCC 4 cut(s) 286, 340, 352, 967
Lsp1109I GCAGC 1 cut(s) 178
LweI GCATC 2 cut(s) 1292, 1462
MabI ACCWGGT 1 cut(s) 18
MaeI CTAG 2 cut(s) 1104, 1465
MaeII ACGT 4 cut(s) 650, 984, 1062, 1383
MaeIII GTNAC 4 cut(s) 90, 169, 445, 610
MalI GATC 4 cut(s) 548, 939, 1275, 1294
MbiI CCGCTC 2 cut(s) 330, 343
MboI GATC 4 cut(s) 546, 937, 1273, 1292
MboII GAAGA 9 cut(s) 148, 290, 640, 655, 658, 764, 865, 992, 1157
MfeI CAATTG 1 cut(s) 941
MhlI GDGCHC 5 cut(s) 30, 291, 306, 972, 990
MlyI GAGTC 1 cut(s) 173
MnlI CCTC 9 cut(s) 131, 222, 259, 354, 360, 502, 585, 618, 748
MseI TTAA 2 cut(s) 12, 347
MslI CAYNNNNRTG 1 cut(s) 848
MspI CCGG 4 cut(s) 87, 257, 724, 728
MspR9I CCNGG 2 cut(s) 20, 88
MunI CAATTG 1 cut(s) 941
MvaI CCWGG 1 cut(s) 20
NciI CCSGG 1 cut(s) 88
NcoI CCATGG 1 cut(s) 1247
NdeII GATC 4 cut(s) 546, 937, 1273, 1292
NlaIII CATG 7 cut(s) 229, 470, 553, 847, 909, 1246, 1251
NlaIV GGNNCC 1 cut(s) 288
NmuCI GTSAC 3 cut(s) 90, 169, 610
NspI RCATGY 2 cut(s) 470, 1246
NspV TTCGAA 1 cut(s) 619
PaeI GCATGC 1 cut(s) 1246
PciI ACATGT 1 cut(s) 466
PcsI WCGNNNNNNNCGW 1 cut(s) 1353
PfeI GAWTC 5 cut(s) 241, 271, 503, 532, 537
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 172
PpsI GAGTC 1 cut(s) 172
PscI ACATGT 1 cut(s) 466
Psp124BI GAGCTC 1 cut(s) 306
Psp6I CCWGG 1 cut(s) 18
PspEI GGTNACC 1 cut(s) 90
PspGI CCWGG 1 cut(s) 18
PspN4I GGNNCC 1 cut(s) 288
PspPI GGNCC 2 cut(s) 84, 721
RsaI GTAC 3 cut(s) 465, 1121, 1315
RsaNI GTAC 3 cut(s) 464, 1120, 1314
RseI CAYNNNNRTG 1 cut(s) 848
SacI GAGCTC 1 cut(s) 306
SalI GTCGAC 1 cut(s) 250
SaqAI TTAA 2 cut(s) 12, 347
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 4 cut(s) 546, 937, 1273, 1292
Sau96I GGNCC 2 cut(s) 84, 721
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 2 cut(s) 20, 88
SduI GDGCHC 5 cut(s) 30, 291, 306, 972, 990
SexAI ACCWGGT 1 cut(s) 18
SfaNI GCATC 2 cut(s) 1292, 1462
SfuI TTCGAA 1 cut(s) 619
SinI GGWCC 1 cut(s) 721
SmiMI CAYNNNNRTG 1 cut(s) 848
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
SpeI ACTAGT 1 cut(s) 1103
SphI GCATGC 1 cut(s) 1246
SsiI CCGC 4 cut(s) 60, 330, 343, 1416
SspMI CTAG 2 cut(s) 1104, 1465
SstI GAGCTC 1 cut(s) 306
StyD4I CCNGG 2 cut(s) 18, 86
StyI CCWWGG 2 cut(s) 1162, 1247
TaaI ACNGT 5 cut(s) 179, 451, 1025, 1214, 1402
TaiI ACGT 4 cut(s) 653, 987, 1065, 1386
TaqI TCGA 8 cut(s) 251, 315, 535, 556, 619, 978, 1112, 1356
TatI WGTACW 3 cut(s) 463, 1119, 1313
TfiI GAWTC 5 cut(s) 241, 271, 503, 532, 537
Tru1I TTAA 2 cut(s) 12, 347
Tru9I TTAA 2 cut(s) 12, 347
TscAI CASTG 1 cut(s) 686
TseFI GTSAC 3 cut(s) 90, 169, 610
TseI GCWGC 1 cut(s) 191
Tsp45I GTSAC 3 cut(s) 90, 169, 610
TspGWI ACGGA 3 cut(s) 496, 1305, 1362
TspRI CASTG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 986
VpaK11BI GGWCC 1 cut(s) 721
XapI RAATTY 3 cut(s) 7, 196, 1363
XceI RCATGY 2 cut(s) 470, 1246
XmiI GTMKAC 4 cut(s) 136, 251, 1027, 1065
XspI CTAG 2 cut(s) 1104, 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.