E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Sina_RING | PF21362 | 60 - 96 | 1.8e-08 | E3 ubiquitin-protein ligase sina/sinah, RING finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 631 |
| AciI | CCGC | 1 cut(s) | 24 |
| AcsI | RAATTY | 2 cut(s) | 31, 605 |
| AcuI | CTGAAG | 2 cut(s) | 102, 337 |
| AfaI | GTAC | 2 cut(s) | 478, 628 |
| AgsI | TTSAA | 4 cut(s) | 62, 542, 565, 660 |
| AjnI | CCWGG | 1 cut(s) | 163 |
| AluBI | AGCT | 5 cut(s) | 122, 242, 447, 534, 549 |
| AluI | AGCT | 5 cut(s) | 122, 242, 447, 534, 549 |
| Alw21I | GWGCWC | 1 cut(s) | 257 |
| Alw26I | GTCTC | 2 cut(s) | 87, 618 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 616 |
| ApoI | RAATTY | 2 cut(s) | 31, 605 |
| AspLEI | GCGC | 1 cut(s) | 735 |
| AsuNHI | GCTAGC | 1 cut(s) | 122 |
| BbsI | GAAGAC | 1 cut(s) | 205 |
| Bbv12I | GWGCWC | 1 cut(s) | 257 |
| BbvCI | CCTCAGC | 1 cut(s) | 328 |
| BccI | CCATC | 1 cut(s) | 88 |
| BciT130I | CCWGG | 1 cut(s) | 165 |
| BclI | TGATCA | 2 cut(s) | 223, 361 |
| BcoDI | GTCTC | 2 cut(s) | 87, 618 |
| BfaI | CTAG | 3 cut(s) | 123, 239, 546 |
| BfmI | CTRYAG | 1 cut(s) | 638 |
| BfuAI | ACCTGC | 1 cut(s) | 631 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 300 |
| BmcAI | AGTACT | 1 cut(s) | 628 |
| Bme1390I | CCNGG | 1 cut(s) | 165 |
| BmiI | GGNNCC | 1 cut(s) | 304 |
| BmrFI | CCNGG | 1 cut(s) | 165 |
| BmsI | GCATC | 2 cut(s) | 244, 302 |
| BmtI | GCTAGC | 1 cut(s) | 126 |
| BpiI | GAAGAC | 1 cut(s) | 205 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 328 |
| Bsa29I | ATCGAT | 2 cut(s) | 267, 310 |
| BsaI | GGTCTC | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 2 cut(s) | 163, 333 |
| Bse1I | ACTGG | 1 cut(s) | 217 |
| BseBI | CCWGG | 1 cut(s) | 165 |
| BseCI | ATCGAT | 2 cut(s) | 267, 310 |
| BseDI | CCNNGG | 2 cut(s) | 163, 333 |
| BseMII | CTCAG | 2 cut(s) | 27, 342 |
| BseNI | ACTGG | 1 cut(s) | 217 |
| BshVI | ATCGAT | 2 cut(s) | 267, 310 |
| BsiHKAI | GWGCWC | 1 cut(s) | 257 |
| BsmAI | GTCTC | 2 cut(s) | 87, 618 |
| Bso31I | GGTCTC | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp143I | GATC | 3 cut(s) | 223, 361, 571 |
| BspACI | CCGC | 1 cut(s) | 24 |
| BspCNI | CTCAG | 2 cut(s) | 26, 341 |
| BspDI | ATCGAT | 2 cut(s) | 267, 310 |
| BspLI | GGNNCC | 1 cut(s) | 304 |
| BspMAI | CTGCAG | 1 cut(s) | 642 |
| BspMI | ACCTGC | 1 cut(s) | 631 |
| BspOI | GCTAGC | 1 cut(s) | 126 |
| BspTNI | GGTCTC | 1 cut(s) | 87 |
| BsrI | ACTGG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 2 cut(s) | 163, 333 |
| BssMI | GATC | 3 cut(s) | 223, 361, 571 |
| BssT1I | CCWWGG | 1 cut(s) | 333 |
| Bst2UI | CCWGG | 1 cut(s) | 165 |
| Bst4CI | ACNGT | 4 cut(s) | 145, 205, 416, 529 |
| Bst6I | CTCTTC | 1 cut(s) | 703 |
| BstC8I | GCNNGC | 3 cut(s) | 124, 244, 638 |
| BstDEI | CTNAG | 2 cut(s) | 13, 328 |
| BstHHI | GCGC | 1 cut(s) | 735 |
| BstKTI | GATC | 3 cut(s) | 226, 364, 574 |
| BstMAI | GTCTC | 2 cut(s) | 87, 618 |
| BstMBI | GATC | 3 cut(s) | 223, 361, 571 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 132, 186, 252, 300 |
| BstNI | CCWGG | 1 cut(s) | 165 |
| BstSCI | CCNGG | 1 cut(s) | 163 |
| BstSFI | CTRYAG | 1 cut(s) | 638 |
| BstV2I | GAAGAC | 1 cut(s) | 205 |
| Bsu15I | ATCGAT | 2 cut(s) | 267, 310 |
| BsuTUI | ATCGAT | 2 cut(s) | 267, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 224 |
| BveI | ACCTGC | 1 cut(s) | 631 |
| Cac8I | GCNNGC | 3 cut(s) | 124, 244, 638 |
| CaiI | CAGNNNCTG | 1 cut(s) | 616 |
| CfoI | GCGC | 1 cut(s) | 735 |
| ClaI | ATCGAT | 2 cut(s) | 267, 310 |
| Csp6I | GTAC | 2 cut(s) | 477, 627 |
| CviAII | CATG | 2 cut(s) | 553, 681 |
| CviQI | GTAC | 2 cut(s) | 477, 627 |
| DdeI | CTNAG | 2 cut(s) | 13, 328 |
| DpnI | GATC | 3 cut(s) | 225, 363, 573 |
| DpnII | GATC | 3 cut(s) | 223, 361, 571 |
| Eam1104I | CTCTTC | 1 cut(s) | 703 |
| EarI | CTCTTC | 1 cut(s) | 703 |
| Eco130I | CCWWGG | 1 cut(s) | 333 |
| Eco31I | GGTCTC | 1 cut(s) | 87 |
| Eco57I | CTGAAG | 2 cut(s) | 102, 337 |
| EcoRII | CCWGG | 1 cut(s) | 163 |
| EcoT14I | CCWWGG | 1 cut(s) | 333 |
| ErhI | CCWWGG | 1 cut(s) | 333 |
| FaeI | CATG | 2 cut(s) | 556, 684 |
| FaiI | YATR | 7 cut(s) | 108, 343, 393, 554, 570, 682, 728 |
| FatI | CATG | 2 cut(s) | 552, 680 |
| FbaI | TGATCA | 2 cut(s) | 223, 361 |
| FspBI | CTAG | 3 cut(s) | 123, 239, 546 |
| GlaI | GCGC | 1 cut(s) | 734 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| HhaI | GCGC | 1 cut(s) | 735 |
| Hin1II | CATG | 2 cut(s) | 556, 684 |
| Hin6I | GCGC | 1 cut(s) | 733 |
| HinP1I | GCGC | 1 cut(s) | 733 |
| HinfI | GANTC | 2 cut(s) | 371, 695 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 194 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 618 |
| Hpy188III | TCNNGA | 4 cut(s) | 39, 461, 660, 712 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 194 |
| HpyAV | CCTTC | 2 cut(s) | 125, 666 |
| HpyCH4III | ACNGT | 4 cut(s) | 145, 205, 416, 529 |
| HpyCH4V | TGCA | 2 cut(s) | 315, 640 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 132, 186, 252, 300 |
| HpyF3I | CTNAG | 2 cut(s) | 13, 328 |
| Hsp92II | CATG | 2 cut(s) | 556, 684 |
| HspAI | GCGC | 1 cut(s) | 733 |
| Ksp22I | TGATCA | 2 cut(s) | 223, 361 |
| Kzo9I | GATC | 3 cut(s) | 223, 361, 571 |
| LmnI | GCTCC | 3 cut(s) | 251, 260, 308 |
| LweI | GCATC | 2 cut(s) | 244, 302 |
| MaeI | CTAG | 3 cut(s) | 123, 239, 546 |
| MaeIII | GTNAC | 1 cut(s) | 523 |
| MalI | GATC | 3 cut(s) | 225, 363, 573 |
| MboI | GATC | 3 cut(s) | 223, 361, 571 |
| MboII | GAAGA | 3 cut(s) | 205, 566, 690 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MluCI | AATT | 4 cut(s) | 31, 183, 423, 605 |
| MlyI | GAGTC | 1 cut(s) | 689 |
| MnlI | CCTC | 3 cut(s) | 337, 500, 550 |
| MseI | TTAA | 3 cut(s) | 155, 645, 674 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspR9I | CCNGG | 1 cut(s) | 165 |
| MvaI | CCWGG | 1 cut(s) | 165 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 132, 186, 252, 300 |
| NdeII | GATC | 3 cut(s) | 223, 361, 571 |
| NheI | GCTAGC | 1 cut(s) | 122 |
| NlaIII | CATG | 2 cut(s) | 556, 684 |
| NlaIV | GGNNCC | 1 cut(s) | 304 |
| NmuCI | GTSAC | 1 cut(s) | 523 |
| PfeI | GAWTC | 1 cut(s) | 371 |
| PleI | GAGTC | 1 cut(s) | 689 |
| PpsI | GAGTC | 1 cut(s) | 689 |
| Psp6I | CCWGG | 1 cut(s) | 163 |
| PspGI | CCWGG | 1 cut(s) | 163 |
| PspN4I | GGNNCC | 1 cut(s) | 304 |
| PstI | CTGCAG | 1 cut(s) | 642 |
| PstNI | CAGNNNCTG | 1 cut(s) | 616 |
| RsaI | GTAC | 2 cut(s) | 478, 628 |
| RsaNI | GTAC | 2 cut(s) | 477, 627 |
| SaqAI | TTAA | 3 cut(s) | 155, 645, 674 |
| Sau3AI | GATC | 3 cut(s) | 223, 361, 571 |
| SbfI | CCTGCAGG | 1 cut(s) | 642 |
| ScaI | AGTACT | 1 cut(s) | 628 |
| SchI | GAGTC | 1 cut(s) | 689 |
| ScrFI | CCNGG | 1 cut(s) | 165 |
| SdaI | CCTGCAGG | 1 cut(s) | 642 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SfaNI | GCATC | 2 cut(s) | 244, 302 |
| SfcI | CTRYAG | 1 cut(s) | 638 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 642 |
| Sse9I | AATT | 4 cut(s) | 31, 183, 423, 605 |
| SsiI | CCGC | 1 cut(s) | 24 |
| SspMI | CTAG | 3 cut(s) | 123, 239, 546 |
| StyD4I | CCNGG | 1 cut(s) | 163 |
| StyI | CCWWGG | 1 cut(s) | 333 |
| TaaI | ACNGT | 4 cut(s) | 145, 205, 416, 529 |
| TaqI | TCGA | 5 cut(s) | 113, 267, 310, 460, 693 |
| TasI | AATT | 4 cut(s) | 31, 183, 423, 605 |
| TatI | WGTACW | 1 cut(s) | 626 |
| TfiI | GAWTC | 1 cut(s) | 371 |
| Tru1I | TTAA | 3 cut(s) | 155, 645, 674 |
| Tru9I | TTAA | 3 cut(s) | 155, 645, 674 |
| TscAI | CASTG | 1 cut(s) | 224 |
| TseFI | GTSAC | 1 cut(s) | 523 |
| Tsp45I | GTSAC | 1 cut(s) | 523 |
| TspDTI | ATGAA | 1 cut(s) | 541 |
| TspRI | CASTG | 1 cut(s) | 224 |
| XapI | RAATTY | 2 cut(s) | 31, 605 |
| XspI | CTAG | 3 cut(s) | 123, 239, 546 |
| ZrmI | AGTACT | 1 cut(s) | 628 |