E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Sina_RING | PF21362 | 131 - 167 | 2.8e-10 | E3 ubiquitin-protein ligase sina/sinah, RING finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 208 |
| AciI | CCGC | 2 cut(s) | 163, 206 |
| AclWI | GGATC | 2 cut(s) | 106, 154 |
| AcsI | RAATTY | 1 cut(s) | 273 |
| AgsI | TTSAA | 4 cut(s) | 217, 278, 308, 407 |
| AjnI | CCWGG | 1 cut(s) | 376 |
| AluBI | AGCT | 1 cut(s) | 455 |
| AluI | AGCT | 1 cut(s) | 455 |
| Alw26I | GTCTC | 1 cut(s) | 214 |
| AlwI | GGATC | 2 cut(s) | 106, 154 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 26, 143 |
| Ama87I | CYCGRG | 1 cut(s) | 169 |
| ApoI | RAATTY | 1 cut(s) | 273 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 273 |
| AspLEI | GCGC | 2 cut(s) | 123, 473 |
| AsuHPI | GGTGA | 1 cut(s) | 350 |
| AvaI | CYCGRG | 1 cut(s) | 169 |
| BbsI | GAAGAC | 2 cut(s) | 81, 418 |
| BccI | CCATC | 1 cut(s) | 431 |
| BciT130I | CCWGG | 1 cut(s) | 378 |
| BcoDI | GTCTC | 1 cut(s) | 214 |
| BglII | AGATCT | 1 cut(s) | 94 |
| Bme1390I | CCNGG | 1 cut(s) | 378 |
| BmeT110I | CYCGRG | 1 cut(s) | 169 |
| BmrFI | CCNGG | 1 cut(s) | 378 |
| BpiI | GAAGAC | 2 cut(s) | 81, 418 |
| Bpu10I | CCTNAGC | 1 cut(s) | 209 |
| BsaI | GGTCTC | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 1 cut(s) | 376 |
| Bse118I | RCCGGY | 1 cut(s) | 117 |
| Bse1I | ACTGG | 1 cut(s) | 430 |
| BseBI | CCWGG | 1 cut(s) | 378 |
| BseDI | CCNNGG | 1 cut(s) | 376 |
| BseGI | GGATG | 1 cut(s) | 193 |
| BseMII | CTCAG | 3 cut(s) | 144, 192, 223 |
| BseNI | ACTGG | 1 cut(s) | 430 |
| BsiHKCI | CYCGRG | 1 cut(s) | 169 |
| BsiSI | CCGG | 1 cut(s) | 118 |
| BsmAI | GTCTC | 1 cut(s) | 214 |
| Bso31I | GGTCTC | 1 cut(s) | 214 |
| BsoBI | CYCGRG | 1 cut(s) | 169 |
| Bsp143I | GATC | 4 cut(s) | 42, 94, 111, 159 |
| BspACI | CCGC | 2 cut(s) | 163, 206 |
| BspCNI | CTCAG | 3 cut(s) | 143, 191, 222 |
| BspPI | GGATC | 2 cut(s) | 106, 154 |
| BspTNI | GGTCTC | 1 cut(s) | 214 |
| BsrBI | CCGCTC | 1 cut(s) | 208 |
| BsrFI | RCCGGY | 1 cut(s) | 117 |
| BsrI | ACTGG | 1 cut(s) | 430 |
| BssAI | RCCGGY | 1 cut(s) | 117 |
| BssECI | CCNNGG | 1 cut(s) | 376 |
| BssMI | GATC | 4 cut(s) | 42, 94, 111, 159 |
| Bst2UI | CCWGG | 1 cut(s) | 378 |
| Bst4CI | ACNGT | 3 cut(s) | 80, 344, 418 |
| BstC8I | GCNNGC | 1 cut(s) | 457 |
| BstDEI | CTNAG | 5 cut(s) | 58, 130, 178, 209, 368 |
| BstEII | GGTNACC | 2 cut(s) | 338, 361 |
| BstF5I | GGATG | 1 cut(s) | 193 |
| BstHHI | GCGC | 2 cut(s) | 123, 473 |
| BstKTI | GATC | 4 cut(s) | 45, 97, 114, 162 |
| BstMAI | GTCTC | 1 cut(s) | 214 |
| BstMBI | GATC | 4 cut(s) | 42, 94, 111, 159 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 399 |
| BstNI | CCWGG | 1 cut(s) | 378 |
| BstPI | GGTNACC | 2 cut(s) | 338, 361 |
| BstSCI | CCNGG | 1 cut(s) | 376 |
| BstV2I | GAAGAC | 2 cut(s) | 81, 418 |
| BstX2I | RGATCY | 1 cut(s) | 94 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 437 |
| BstYI | RGATCY | 1 cut(s) | 94 |
| BtsCI | GGATG | 1 cut(s) | 193 |
| BtsIMutI | CAGTG | 1 cut(s) | 437 |
| Cac8I | GCNNGC | 1 cut(s) | 457 |
| CaiI | CAGNNNCTG | 2 cut(s) | 26, 143 |
| CfoI | GCGC | 2 cut(s) | 123, 473 |
| Cfr10I | RCCGGY | 1 cut(s) | 117 |
| CviJI | RGCY | 3 cut(s) | 105, 311, 455 |
| CviKI_1 | RGCY | 3 cut(s) | 105, 311, 455 |
| DdeI | CTNAG | 5 cut(s) | 58, 130, 178, 209, 368 |
| DpnI | GATC | 4 cut(s) | 44, 96, 113, 161 |
| DpnII | GATC | 4 cut(s) | 42, 94, 111, 159 |
| EciI | GGCGGA | 1 cut(s) | 152 |
| Eco31I | GGTCTC | 1 cut(s) | 214 |
| Eco88I | CYCGRG | 1 cut(s) | 169 |
| Eco91I | GGTNACC | 2 cut(s) | 338, 361 |
| EcoO65I | GGTNACC | 2 cut(s) | 338, 361 |
| EcoRII | CCWGG | 1 cut(s) | 376 |
| FaiI | YATR | 2 cut(s) | 297, 299 |
| FokI | GGATG | 1 cut(s) | 200 |
| GlaI | GCGC | 2 cut(s) | 122, 472 |
| HapII | CCGG | 1 cut(s) | 118 |
| HhaI | GCGC | 2 cut(s) | 123, 473 |
| Hin6I | GCGC | 2 cut(s) | 121, 471 |
| HinP1I | GCGC | 2 cut(s) | 121, 471 |
| HpaII | CCGG | 1 cut(s) | 118 |
| HphI | GGTGA | 1 cut(s) | 350 |
| Hpy188I | TCNGA | 9 cut(s) | 22, 28, 67, 91, 133, 139, 145, 181, 187 |
| Hpy188III | TCNNGA | 3 cut(s) | 83, 98, 217 |
| HpyAV | CCTTC | 2 cut(s) | 248, 504 |
| HpyCH4III | ACNGT | 3 cut(s) | 80, 344, 418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 399 |
| HpyF3I | CTNAG | 5 cut(s) | 58, 130, 178, 209, 368 |
| HspAI | GCGC | 2 cut(s) | 121, 471 |
| Kzo9I | GATC | 4 cut(s) | 42, 94, 111, 159 |
| MaeIII | GTNAC | 4 cut(s) | 338, 344, 361, 371 |
| MalI | GATC | 4 cut(s) | 44, 96, 113, 161 |
| MbiI | CCGCTC | 1 cut(s) | 208 |
| MboI | GATC | 4 cut(s) | 42, 94, 111, 159 |
| MboII | GAAGA | 7 cut(s) | 86, 104, 272, 275, 278, 281, 418 |
| MflI | RGATCY | 1 cut(s) | 94 |
| MluCI | AATT | 2 cut(s) | 273, 396 |
| MnlI | CCTC | 1 cut(s) | 234 |
| MroXI | GAANNNNTTC | 1 cut(s) | 273 |
| MseI | TTAA | 1 cut(s) | 11 |
| MspI | CCGG | 1 cut(s) | 118 |
| MspR9I | CCNGG | 1 cut(s) | 378 |
| MvaI | CCWGG | 1 cut(s) | 378 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 399 |
| NdeII | GATC | 4 cut(s) | 42, 94, 111, 159 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 2 cut(s) | 338, 371 |
| PdmI | GAANNNNTTC | 1 cut(s) | 273 |
| PflFI | GACNNNGTC | 1 cut(s) | 225 |
| Psp6I | CCWGG | 1 cut(s) | 376 |
| PspEI | GGTNACC | 2 cut(s) | 338, 361 |
| PspGI | CCWGG | 1 cut(s) | 376 |
| PstNI | CAGNNNCTG | 2 cut(s) | 26, 143 |
| PsuI | RGATCY | 1 cut(s) | 94 |
| PsyI | GACNNNGTC | 1 cut(s) | 225 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| Sau3AI | GATC | 4 cut(s) | 42, 94, 111, 159 |
| ScrFI | CCNGG | 1 cut(s) | 378 |
| SetI | ASST | 4 cut(s) | 215, 226, 340, 457 |
| SgrAI | CRCCGGYG | 1 cut(s) | 117 |
| Sse9I | AATT | 2 cut(s) | 273, 396 |
| SsiI | CCGC | 2 cut(s) | 163, 206 |
| SspI | AATATT | 1 cut(s) | 355 |
| StyD4I | CCNGG | 1 cut(s) | 376 |
| TaaI | ACNGT | 3 cut(s) | 80, 344, 418 |
| TaqI | TCGA | 1 cut(s) | 480 |
| TasI | AATT | 2 cut(s) | 273, 396 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TscAI | CASTG | 1 cut(s) | 437 |
| TseFI | GTSAC | 2 cut(s) | 338, 371 |
| Tsp45I | GTSAC | 2 cut(s) | 338, 371 |
| TspRI | CASTG | 1 cut(s) | 437 |
| Tth111I | GACNNNGTC | 1 cut(s) | 225 |
| XapI | RAATTY | 1 cut(s) | 273 |
| XmnI | GAANNNNTTC | 1 cut(s) | 273 |