Rorug03G0275700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000450
Physical Location & Seq
Reverse (-)
27266975 .. 27278267
11293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0275700.1

Sequence Viewer

Length: 1803 bp
ATGGCGCCAAGGAAGACCGCATCGTCCTCTCCGATCTCAATCGGCAATTGCGAGGTGACAGTGGAAGCTACCGGCTTCAGTTGCCGATCAGAGCCGGACTCCCTCCAAATCTCCCTCTCCAAAACATCCAAAATCACTATCTCATTGAAAAAACAAACCGAAACAAATAGCATTTCTGGGCATTTCAAATCTCAAGGAGGTGATCTTTCGTTCGTGCTTGTTAATCCTAAAGATGCCAATAGCTGTAGCAAATCCTATCTCCAGGAAGTACTAAAGATGTACATTAGGGAACTTCCTGCAATGAATTTCGCTGCCAATACTGGAAAACAGTCAATGTTCCTTGAAAGATGCGTTACAAATGGGAAATACTGCACTTTGCTTTTGCAGTCTCATTCTTTGCGTCATTCGCAAAAGGTTATAGCTGCTATCACTTATCAAATAGTTCCCGCTGACACACAGTACGCTGAGATACCTATTGCTGCTGTCAGTTCAATGTACCAACACAAGGGATTTGGTAGCTCTTTGTTCCTGGAATTGAAAAAGAGACTTCAAAGTGTTGGTATATGCACAATATTTTGTTGGGGAGACAAGGAATCTGAAGGGTTTTGGCTCAAACAGGGTTTCGTATCAATAGCAGAGGTAGATACTAAGGGTAGACGCTGCAGGCCACCTATTAAAGCTGATATTCGTAGAGCATTATGCTTTCCAGGTGGTTCAACCCTCATGGTTTTACATCTTAAGCAGCAGGCTTCAGCAAATACTCTAGACTCTTTGGAGTTGGGCGCTTCTTTTAAGCCTACAAGGAATTTGTCATCTGATGCTCTCACCAGAGAGGACTCCAGCAAGTTGGTCAGCGGTGCAAAATTATCCAATATTGAAGACAATGGTGATATAAACCACTGTTCTTCCAAACAAGGCAAAGTTGCAAAGAGAAAGGTCTGGAAATCTTCAATATCATCACTGAAGTCAAAAAAAGTAAAAGGAAGTCATTGCTGTCAGTTTGAGTCTAACTCCACTGATGGAAGTGAGTTTTGTTTACAACGATGCTCCTTTGTTTCTTCCAAAGATAAATCTTTACTGGCAGATCCCCCTAGAGAGTGCGCTATTAGTTGCAAGGAAAAGATTGCTGAAGAATGTGGACCAGCTAATATAACACTAGAAACTTCAGTCCAGAAGGAGTTTCAGTCACAGAGAGAATCCTTCAAAATCATGTTGATGAATATTGCAGATGATGCAAAGAAAGCAAATATTACAAAGGTAATTGAGGACCTTGGTGGGGCTATTACATGTAATGGGAGTACAAGTACACATGTTGTTACCGGGAAAGTGAGAACAACTCTGAATTTCTGTACTGCTCTTTGTTCAGGAGCTTGGATCGTTTCTCCCTTTTGGTTGAAAGAAAGCTTTCATCAAGGAACATACGTTGACGAATCATCTTACATATTACATGATGAAGAATATGTTCTTAAATATGGAGCTGAGCTGAAAGCTGCAGTTCTCAGAGCAAAAGCAAGTCCTCAAGGCTTGCTTAAAGGCTATAATGTATACATAGCAGCTCATGTTCAACCCCCTGCAAAGATGTTATCTACCATTGTCAGGTCTGCTGGTGGAAATATAATTGGTGGACTGGAAAAAGTAAATGAAGCTTCACGAACAATATTTGTGGCATGCGAAGAAGACATGGAAGAAGTAGTGTTGGCTGTAAAGAAGGGGATAGGCACTTTTAGCAGTGATTGGCTTATGAACTGTATCATGAGACAGGAGCTAGACTTAGAGGCCCCCCAGTTTGTAGAGTCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

600

Amino Acids

65.66

Weight (kDa)

8.68

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RTT107_BRCT_5 PF16770 391 - 482 4.1e-07 Regulator of Ty1 transposition protein 107 BRCT domain
BRCT PF00533 409 - 469 3.1e-07 BRCA1 C Terminus (BRCT) domain
BRCT_2 PF16589 509 - 590 1.9e-13 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000450)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20080 FvH4_1g23272 FvH4_1g24190 FvH4_1g24191 FvH4_2g16992 FvH4_4g20600 FvH4_5g37430 FvH4_6g13850 FvH4_6g23331 FvH4_7g07732
prunus_persica Prupe.2G062800_v2.0.a1 Prupe.7G020400_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0159341 RchiOBHm_Chr3g0461151 RchiOBHm_Chr3g0471341 RchiOBHm_Chr5g0079051
rosa_laevigata RLG00000013771 RLG00000016694 RLG00000019616 RLG00000020143 RLG00000022642 RLG00000030165
rosa_multiflora Rmu_sc0000058.1_g000010 Rmu_sc0000898.1_g000045 Rmu_sc0001200.1_g000007 Rmu_sc0001200.1_g000008 Rmu_sc0001323.1_g000001 Rmu_sc0002194.1_g000008 Rmu_sc0002206.1_g000017 Rmu_sc0002230.1_g000001 Rmu_sc0002280.1_g000001 Rmu_sc0003047.1_g000022 Rmu_sc0003623.1_g000007 Rmu_sc0003835.1_g000012
rosa_roxburghii Rroxscaffold_1G00019590 Rroxscaffold_1G00029010 Rroxscaffold_1G00029250 Rroxscaffold_1G00031650 Rroxscaffold_1G00031660 Rroxscaffold_1G00052850 Rroxscaffold_2G00144000 Rroxscaffold_3G00231810 Rroxscaffold_3G00245070 Rroxscaffold_3G00268690 Rroxscaffold_4G00312920 Rroxscaffold_5G00350060 Rroxscaffold_6G00412590 Rroxscaffold_6G00412600 Rroxscaffold_6G00420320 Rroxscaffold_7G00192970 Rroxscaffold_7G00197810 Rroxscaffold_7G00208250
rosa_rugosa Rorug01G0074000 Rorug01G0273600.1 Rorug01G0273700 Rorug03G0275700 Rorug04G0060600 Rorug04G0063100 Rorug04G0170400 Rorug05G0185600 Rorug05G0224200 Rorug05G0234600
rosa_samantha Rh1CG227300 Rh1DG133300 Rh1DG133400 Rh2AG004600 Rh2BG038900 Rh3BG045400 Rh3BG359100 Rh3BG359200 Rh3CG044000 Rh3CG355700 Rh4CG188000 Rh4CG217400 Rh4DG018500 Rh4DG092800 Rh4DG128600 Rh4DG141700 Rh5CG305800 Rh5DG275100 Rh5DG430600 Rh6DG316100
rosa_wichuraiana Rw0G005510 Rw0G010440 Rw0G010450 Rw1G018670 Rw3G028280 Rw4G010530 Rw4G010930 Rw4G012110 Rw4G012720 Rw5G007170 Rw7G023020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 22
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 2 cut(s) 655, 1545
AciI CCGC 3 cut(s) 18, 447, 855
AclWI GGATC 2 cut(s) 1079, 1382
AcsI RAATTY 3 cut(s) 304, 805, 1342
AcuI CTGAAG 6 cut(s) 61, 618, 735, 983, 1149, 1149
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 7 cut(s) 270, 281, 461, 497, 1300, 1306, 1351
AfiI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
AflII CTTAAG 1 cut(s) 737
AflIII ACRYGT 2 cut(s) 1286, 1309
AjnI CCWGG 3 cut(s) 261, 528, 706
Alw26I GTCTC 4 cut(s) 393, 538, 579, 1750
AlwI GGATC 2 cut(s) 1079, 1382
AoxI GGCC 2 cut(s) 665, 1776
ApeKI GCWGC 7 cut(s) 311, 422, 479, 660, 742, 1490, 1553
ApoI RAATTY 3 cut(s) 304, 805, 1342
Asp700I GAANNNNTTC 2 cut(s) 1404, 1461
AspLEI GCGC 3 cut(s) 7, 785, 1103
AspS9I GGNCC 3 cut(s) 1139, 1267, 1777
AsuC2I CCSGG 1 cut(s) 1321
AsuHPI GGTGA 4 cut(s) 67, 212, 817, 899
AvaII GGWCC 2 cut(s) 1139, 1267
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 3 cut(s) 20, 885, 1683
BbvI GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1477, 1565
BccI CCATC 1 cut(s) 1013
BciT130I CCWGG 3 cut(s) 263, 530, 708
BcnI CCSGG 1 cut(s) 1321
BcoDI GTCTC 4 cut(s) 393, 538, 579, 1750
BfaI CTAG 4 cut(s) 764, 1092, 1157, 1766
BfmI CTRYAG 3 cut(s) 244, 661, 1491
BfoI RGCGCY 2 cut(s) 8, 786
BfrI CTTAAG 1 cut(s) 737
BisI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1491, 1554
BlpI GCTNAGC 1 cut(s) 1479
BlsI GCNGC 7 cut(s) 313, 424, 481, 662, 744, 1492, 1555
BmcAI AGTACT 1 cut(s) 270
Bme1390I CCNGG 4 cut(s) 263, 530, 708, 1321
Bme18I GGWCC 2 cut(s) 1139, 1267
BmgT120I GGNCC 3 cut(s) 1139, 1267, 1777
BmiI GGNNCC 2 cut(s) 6, 1779
BmrFI CCNGG 4 cut(s) 263, 530, 708, 1321
BmrI ACTGGG 1 cut(s) 1777
BmsI GCATC 6 cut(s) 29, 223, 338, 808, 1034, 1222
BmuI ACTGGG 1 cut(s) 1777
BpiI GAAGAC 3 cut(s) 20, 885, 1683
BplI GAGNNNNNCTC 6 cut(s) 83, 115, 995, 1027, 1321, 1353
BpmI CTGGAG 2 cut(s) 245, 823
Bpu1102I GCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 2 cut(s) 177, 1503
BpuMI CCSGG 1 cut(s) 1321
BsaBI GATNNNNATC 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 8, 1270
BsaXI ACNNNNNCTCC 4 cut(s) 1169, 1199, 1288, 1318
Bsc4I CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 4 cut(s) 325, 1083, 1632, 1783
Bse3DI GCAATG 2 cut(s) 306, 988
Bse8I GATNNNNATC 1 cut(s) 38
BseBI CCWGG 3 cut(s) 263, 530, 708
BseDI CCNNGG 2 cut(s) 8, 1270
BseGI GGATG 1 cut(s) 125
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
BseMI GCAATG 2 cut(s) 306, 988
BseMII CTCAG 3 cut(s) 456, 1470, 1513
BseNI ACTGG 4 cut(s) 325, 1083, 1632, 1783
BseXI GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1477, 1565
BsgI GTGCAG 1 cut(s) 355
BshFI GGCC 2 cut(s) 667, 1778
BshNI GGYRCC 1 cut(s) 4
BsiSI CCGG 3 cut(s) 72, 95, 1320
BslFI GGGAC 1 cut(s) 1780
BslI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
BsmAI GTCTC 4 cut(s) 393, 538, 579, 1750
BsmFI GGGAC 1 cut(s) 1780
BsnI GGCC 2 cut(s) 667, 1778
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 5 cut(s) 33, 86, 202, 1084, 1374
Bsp1720I GCTNAGC 1 cut(s) 1479
BspACI CCGC 3 cut(s) 18, 447, 855
BspANI GGCC 2 cut(s) 667, 1778
BspCNI CTCAG 3 cut(s) 457, 1471, 1512
BspHI TCATGA 1 cut(s) 1752
BspLI GGNNCC 2 cut(s) 6, 1779
BspMAI CTGCAG 2 cut(s) 665, 1495
BspPI GGATC 2 cut(s) 1079, 1382
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 737
BsrDI GCAATG 2 cut(s) 306, 988
BsrFI RCCGGY 1 cut(s) 71
BsrGI TGTACA 1 cut(s) 279
BsrI ACTGG 4 cut(s) 325, 1083, 1632, 1783
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 2 cut(s) 8, 1270
BssMI GATC 5 cut(s) 33, 86, 202, 1084, 1374
BssNAI GTATAC 1 cut(s) 1546
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 8, 1270
Bst1107I GTATAC 1 cut(s) 1546
Bst2UI CCWGG 3 cut(s) 263, 530, 708
Bst4CI ACNGT 5 cut(s) 61, 330, 459, 902, 1748
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 737
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstAUI TGTACA 1 cut(s) 279
BstC8I GCNNGC 4 cut(s) 665, 747, 1526, 1669
BstDEI CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
BstF5I GGATG 1 cut(s) 125
BstH2I RGCGCY 2 cut(s) 8, 786
BstHHI GCGC 3 cut(s) 7, 785, 1103
BstKTI GATC 5 cut(s) 36, 89, 205, 1087, 1377
BstMAI GTCTC 4 cut(s) 393, 538, 579, 1750
BstMBI GATC 5 cut(s) 33, 86, 202, 1084, 1374
BstMWI GCNNNNNNNGC 5 cut(s) 81, 406, 1232, 1241, 1725
BstNI CCWGG 3 cut(s) 263, 530, 708
BstNSI RCATGY 3 cut(s) 1290, 1313, 1671
BstSCI CCNGG 4 cut(s) 261, 528, 706, 1319
BstSFI CTRYAG 3 cut(s) 244, 661, 1491
BstV1I GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1477, 1565
BstV2I GAAGAC 3 cut(s) 20, 885, 1683
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 1 cut(s) 847
BstYI RGATCY 1 cut(s) 1084
BstZ17I GTATAC 1 cut(s) 1546
BsuRI GGCC 2 cut(s) 667, 1778
BtsCI GGATG 1 cut(s) 125
BtsI GCAGTG 1 cut(s) 1735
BtsIMutI CAGTG 5 cut(s) 66, 898, 959, 1014, 1735
Cac8I GCNNGC 4 cut(s) 665, 747, 1526, 1669
CciI TCATGA 1 cut(s) 1752
CfoI GCGC 3 cut(s) 7, 785, 1103
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 3 cut(s) 1139, 1267, 1777
CseI GACGC 2 cut(s) 389, 666
Csp6I GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
CspCI CAANNNNNGTGG 2 cut(s) 1644, 1679
CviAII CATG 9 cut(s) 724, 1210, 1287, 1310, 1448, 1559, 1668, 1681, 1753
CviQI GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
DdeI CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
DinI GGCGCC 1 cut(s) 6
DpnI GATC 5 cut(s) 35, 88, 204, 1086, 1376
DpnII GATC 5 cut(s) 33, 86, 202, 1084, 1374
DrdI GACNNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 8, 1270
Eco47I GGWCC 2 cut(s) 1139, 1267
Eco57I CTGAAG 6 cut(s) 61, 618, 735, 983, 1149, 1149
EcoO109I RGGNCCY 2 cut(s) 1267, 1777
EcoRII CCWGG 3 cut(s) 261, 528, 706
EcoT14I CCWWGG 2 cut(s) 8, 1270
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 8, 1270
FaeI CATG 9 cut(s) 727, 1213, 1290, 1313, 1451, 1562, 1671, 1684, 1756
FalI AAGNNNNNCTT 2 cut(s) 1512, 1544
FaqI GGGAC 1 cut(s) 1780
FatI CATG 9 cut(s) 723, 1209, 1286, 1309, 1447, 1558, 1667, 1680, 1752
FauI CCCGC 1 cut(s) 454
FblI GTMKAC 2 cut(s) 655, 1545
Fnu4HI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1491, 1554
FokI GGATG 1 cut(s) 112
Fsp4HI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1491, 1554
FspBI CTAG 4 cut(s) 764, 1092, 1157, 1766
GlaI GCGC 3 cut(s) 6, 784, 1102
GluI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1491, 1554
GsuI CTGGAG 2 cut(s) 245, 823
HaeII RGCGCY 2 cut(s) 8, 786
HaeIII GGCC 2 cut(s) 667, 1778
HapII CCGG 3 cut(s) 72, 95, 1320
HgaI GACGC 2 cut(s) 389, 666
HhaI GCGC 3 cut(s) 7, 785, 1103
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 9 cut(s) 727, 1213, 1290, 1313, 1451, 1562, 1671, 1684, 1756
Hin6I GCGC 3 cut(s) 5, 783, 1101
HinP1I GCGC 3 cut(s) 5, 783, 1101
HincII GTYRAC 1 cut(s) 1426
HindII GTYRAC 1 cut(s) 1426
HindIII AAGCTT 2 cut(s) 1402, 1644
HinfI GANTC 8 cut(s) 98, 593, 767, 836, 1004, 1196, 1430, 1793
HpaII CCGG 3 cut(s) 72, 95, 1320
HphI GGTGA 4 cut(s) 67, 212, 817, 899
Hpy166II GTNNAC 7 cut(s) 656, 1037, 1139, 1307, 1426, 1546, 1625
Hpy188I TCNGA 6 cut(s) 33, 91, 598, 817, 1341, 1502
Hpy188III TCNNGA 6 cut(s) 764, 940, 1171, 1365, 1650, 1753
Hpy8I GTNNAC 7 cut(s) 656, 1037, 1139, 1307, 1426, 1546, 1625
HpyAV CCTTC 4 cut(s) 593, 1168, 1210, 1702
HpyCH4III ACNGT 5 cut(s) 61, 330, 459, 902, 1748
HpyCH4IV ACGT 1 cut(s) 1422
HpyF10VI GCNNNNNNNGC 5 cut(s) 81, 406, 1232, 1241, 1725
HpyF3I CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
HpySE526I ACGT 1 cut(s) 1422
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 9 cut(s) 727, 1213, 1290, 1313, 1451, 1562, 1671, 1684, 1756
HspAI GCGC 3 cut(s) 5, 783, 1101
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 5 cut(s) 33, 86, 202, 1084, 1374
LmnI GCTCC 4 cut(s) 1052, 1367, 1475, 1762
Lsp1109I GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1477, 1565
LweI GCATC 6 cut(s) 29, 223, 338, 808, 1034, 1222
MaeI CTAG 4 cut(s) 764, 1092, 1157, 1766
MaeII ACGT 1 cut(s) 1422
MaeIII GTNAC 4 cut(s) 55, 352, 1185, 1315
MalI GATC 5 cut(s) 35, 88, 204, 1086, 1376
MboI GATC 5 cut(s) 33, 86, 202, 1084, 1374
MfeI CAATTG 1 cut(s) 46
MflI RGATCY 1 cut(s) 1084
MluCI AATT 8 cut(s) 46, 304, 533, 805, 863, 1260, 1342, 1617
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 5 cut(s) 92, 761, 830, 1013, 1802
MroXI GAANNNNTTC 2 cut(s) 1404, 1461
MseI TTAA 6 cut(s) 222, 675, 738, 792, 1467, 1530
MslI CAYNNNNRTG 1 cut(s) 1214
MspA1I CMGCKG 2 cut(s) 449, 855
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 3 cut(s) 72, 95, 1320
MspR9I CCNGG 4 cut(s) 263, 530, 708, 1321
MunI CAATTG 1 cut(s) 46
MvaI CCWGG 3 cut(s) 263, 530, 708
MwoI GCNNNNNNNGC 5 cut(s) 81, 406, 1232, 1241, 1725
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 1321
NdeII GATC 5 cut(s) 33, 86, 202, 1084, 1374
NlaIII CATG 9 cut(s) 727, 1213, 1290, 1313, 1451, 1562, 1671, 1684, 1756
NlaIV GGNNCC 2 cut(s) 6, 1779
NmuCI GTSAC 2 cut(s) 55, 1185
NspI RCATGY 3 cut(s) 1290, 1313, 1671
PaeI GCATGC 1 cut(s) 1671
PagI TCATGA 1 cut(s) 1752
PciI ACATGT 2 cut(s) 1286, 1309
PcsI WCGNNNNNNNCGW 2 cut(s) 29, 48
PdmI GAANNNNTTC 2 cut(s) 1404, 1461
PfeI GAWTC 3 cut(s) 593, 1196, 1430
PfoI TCCNGGA 2 cut(s) 261, 528
PkrI GCNGC 7 cut(s) 313, 424, 481, 662, 744, 1492, 1555
PleI GAGTC 5 cut(s) 92, 761, 830, 1012, 1801
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 5 cut(s) 92, 761, 830, 1012, 1801
PpuMI RGGWCCY 1 cut(s) 1267
PscI ACATGT 2 cut(s) 1286, 1309
Psp5II RGGWCCY 1 cut(s) 1267
Psp6I CCWGG 3 cut(s) 261, 528, 706
PspGI CCWGG 3 cut(s) 261, 528, 706
PspN4I GGNNCC 2 cut(s) 6, 1779
PspPI GGNCC 3 cut(s) 1139, 1267, 1777
PspPPI RGGWCCY 1 cut(s) 1267
PstI CTGCAG 2 cut(s) 665, 1495
PsuI RGATCY 1 cut(s) 1084
RsaI GTAC 7 cut(s) 270, 281, 461, 497, 1300, 1306, 1351
RsaNI GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
RseI CAYNNNNRTG 1 cut(s) 1214
SaqAI TTAA 6 cut(s) 222, 675, 738, 792, 1467, 1530
SatI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1491, 1554
Sau3AI GATC 5 cut(s) 33, 86, 202, 1084, 1374
Sau96I GGNCC 3 cut(s) 1139, 1267, 1777
ScaI AGTACT 1 cut(s) 270
SchI GAGTC 5 cut(s) 92, 761, 830, 1013, 1802
ScrFI CCNGG 4 cut(s) 263, 530, 708, 1321
SfaNI GCATC 6 cut(s) 29, 223, 338, 808, 1034, 1222
SfcI CTRYAG 3 cut(s) 244, 661, 1491
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 1139, 1267
SmiMI CAYNNNNRTG 1 cut(s) 1214
SmlI CTYRAG 3 cut(s) 192, 737, 1518
SmoI CTYRAG 3 cut(s) 192, 737, 1518
SphI GCATGC 1 cut(s) 1671
Sse9I AATT 8 cut(s) 46, 304, 533, 805, 863, 1260, 1342, 1617
SsiI CCGC 3 cut(s) 18, 447, 855
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 5 cut(s) 573, 874, 1222, 1249, 1659
SspMI CTAG 4 cut(s) 764, 1092, 1157, 1766
StyD4I CCNGG 4 cut(s) 261, 528, 706, 1319
StyI CCWWGG 2 cut(s) 8, 1270
TaaI ACNGT 5 cut(s) 61, 330, 459, 902, 1748
TaiI ACGT 1 cut(s) 1425
TasI AATT 8 cut(s) 46, 304, 533, 805, 863, 1260, 1342, 1617
TatI WGTACW 5 cut(s) 268, 279, 1298, 1304, 1349
TfiI GAWTC 3 cut(s) 593, 1196, 1430
Tru1I TTAA 6 cut(s) 222, 675, 738, 792, 1467, 1530
Tru9I TTAA 6 cut(s) 222, 675, 738, 792, 1467, 1530
TscAI CASTG 5 cut(s) 66, 905, 966, 1021, 1735
TseFI GTSAC 2 cut(s) 55, 1185
TseI GCWGC 7 cut(s) 311, 422, 479, 660, 742, 1490, 1553
Tsp45I GTSAC 2 cut(s) 55, 1185
TspDTI ATGAA 6 cut(s) 317, 1232, 1397, 1467, 1656, 1757
TspRI CASTG 5 cut(s) 66, 905, 966, 1021, 1735
Vha464I CTTAAG 1 cut(s) 737
VpaK11BI GGWCC 2 cut(s) 1139, 1267
XapI RAATTY 3 cut(s) 304, 805, 1342
XbaI TCTAGA 1 cut(s) 763
XceI RCATGY 3 cut(s) 1290, 1313, 1671
XmiI GTMKAC 2 cut(s) 655, 1545
XmnI GAANNNNTTC 2 cut(s) 1404, 1461
XspI CTAG 4 cut(s) 764, 1092, 1157, 1766
ZrmI AGTACT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.