FvH4_1g21400

KIP1-like protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
13343140 .. 13344381
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g21400.t1

Sequence Viewer

Length: 1017 bp
ATGTATTCAGTTATCAGCACTTATGGAGTTACATCACAGGAGCGAGGACTGTTGTTGAAGATGGATGAACGCATTCACAAGCGAGAAATCGAGTATGCAGACGAGGTAAAGAAAAATGATTCTGAGTCGTCAGAGGAAGAGCTAGCTGGCATGGATGTGGATGACAACGCGGCTGATCAAAAACCCAAGTTGTTGGGAATCAATGGCAAAGCTAGCCGGGTGTTCGTCCAAGATCAGTTTTGTGTTGATGATGAGCAGCAAATGATTAAGGTAGTAGAACAAGAAGTTGAGCCCAGTGAAGCCAGACATGCGGAAGACTTGATGATTGGTCACTACGAGAGCTTCAGCAATGACCTTGAAGGTTTTATCAATCATGATGCAAGCATCACTAGTCCTTCCAAGCATGTTGTACTTAGCCATGAGGTAGGGAGTCTGGGGGGTAAGGAAGAAGTGGAGTCATCCACGGCGGAACTGGTTGAAGGAGAAGACATGACAGTGGAACAATCCCCAGCTCACTTCTCTAAGCCAACTCCAGAGATGGTCAAACACATCAAACCTTTGTATATCACCGCTTGTTTCGAGGGATATCCAATTTCAAAGGTTCTTGTTGATGGTGGTGCCGCGGTGAATGTAATCCCAATGTTCGTGGTGTCAAAGTTGAAGAAGACGGAGAAAGACATTCTACCTGCTGACCTTGCAGTATATGATTTTTCTGGATCTAAGAAGAAAACTTTGGGGGTGATTCCACTAGAAGTTAAAATGTTGTTATTCTGGAATGAGGATGAGGTTGAAGTAGTGCGTGCTGATGATAAACCGTTTAAAGCAACGGCTAATGTGGTTGAGGCCGCATATTATGATGAGTTAGTGGGCCCATCCGAAATTCGGAGGGAAGACAACACTGGGAGAATTACTGGTGTTACCATGCGCAGGATGATTTCACTTGGCGCCGTGACTGTCTTTGAAGACTCGGAGCGTCCTGCCTTGGCTAAGCTTTTTGACTCTGTTATTAATGAGTGA

Protein Analysis

339

Amino Acids

37.57

Weight (kDa)

4.69

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000560)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21400 FvH4_1g29793 FvH4_2g35581 FvH4_4g18554 FvH4_6g21671
pyrus_communis pycom11g14070
rosa_chinensis RchiOBHm_Chr6g0263201
rosa_laevigata RLG00000001861 RLG00000002050 RLG00000018783 RLG00000022649 RLG00000030152
rosa_multiflora Rmu_co8107100.1_g000001 Rmu_sc0000805.1_g000009 Rmu_sc0001347.1_g000002 Rmu_sc0001896.1_g000004 Rmu_sc0002170.1_g000040 Rmu_sc0002413.1_g000005 Rmu_sc0002489.1_g000053 Rmu_sc0002942.1_g000015 Rmu_sc0003071.1_g000022 Rmu_sc0003623.1_g000021 Rmu_sc0004063.1_g000005 Rmu_sc0004574.1_g000014 Rmu_sc0004723.1_g000009 Rmu_sc0005177.1_g000013 Rmu_sc0005994.1_g000011 Rmu_sc0006163.1_g000006 Rmu_sc0006583.1_g000008 Rmu_sc0008303.1_g000005 Rmu_sc0009027.1_g000002 Rmu_sc0009027.1_g000003 Rmu_sc0011790.1_g000009 Rmu_sc0011833.1_g000005 Rmu_sc0013493.1_g000006 Rmu_sc0016701.1_g000002 Rmu_sc0022033.1_g000001 Rmu_sc0022185.1_g000001 Rmu_sc0027245.1_g000005 Rmu_sc0030292.1_g000002 Rmu_ssc0000242.1_g000003
rosa_roxburghii Rroxscaffold_1G00015200 Rroxscaffold_1G00059290 Rroxscaffold_2G00079850 Rroxscaffold_2G00079860 Rroxscaffold_2G00107520 Rroxscaffold_2G00123420 Rroxscaffold_2G00123430 Rroxscaffold_3G00265790 Rroxscaffold_5G00335960 Rroxscaffold_5G00338270 Rroxscaffold_5G00343980 Rroxscaffold_5G00343990
rosa_samantha Rh1AG036500 Rh1DG429900 Rh2AG172600 Rh2AG610900 Rh2BG180200 Rh2BG180300 Rh2BG340600 Rh2BG400300 Rh2BG468400 Rh2BG478200 Rh2BG612500 Rh2BG612600 Rh3BG290000 Rh3BG290100 Rh3BG345200 Rh3BG345300 Rh3BG359800 Rh3CG291300 Rh4CG156300 Rh4CG264600 Rh5AG430300 Rh5BG185400 Rh6DG198700 Rh7CG199900 Rh7CG200000 Rh7CG370300 Rh7CG370600 Rh7CG395500 Rh7DG405800 Rh7DG405900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 926
Acc36I ACCTGC 1 cut(s) 694
AccB1I GGYRCC 2 cut(s) 617, 944
AccII CGCG 2 cut(s) 170, 623
AciI CCGC 7 cut(s) 170, 311, 467, 570, 621, 623, 846
AclWI GGATC 1 cut(s) 724
AcsI RAATTY 1 cut(s) 879
AcuI CTGAAG 1 cut(s) 328
AcyI GRCGYC 1 cut(s) 945
AfaI GTAC 1 cut(s) 411
AfiI CCNNNNNNNGG 2 cut(s) 882, 927
AgsI TTSAA 7 cut(s) 58, 359, 479, 597, 661, 791, 962
AhlI ACTAGT 1 cut(s) 389
AjuI GAANNNNNNNTTGG 2 cut(s) 716, 748
AluBI AGCT 6 cut(s) 142, 146, 212, 342, 512, 991
AluI AGCT 6 cut(s) 142, 146, 212, 342, 512, 991
AlwI GGATC 1 cut(s) 724
AoxI GGCC 2 cut(s) 843, 868
ApaI GGGCCC 1 cut(s) 872
ApeKI GCWGC 1 cut(s) 256
ApoI RAATTY 1 cut(s) 879
AseI ATTAAT 1 cut(s) 1008
Asp700I GAANNNNTTC 1 cut(s) 72
AspLEI GCGC 2 cut(s) 927, 947
AspS9I GGNCC 2 cut(s) 868, 869
AsuC2I CCSGG 1 cut(s) 218
AsuHPI GGTGA 3 cut(s) 559, 637, 751
AsuNHI GCTAGC 2 cut(s) 142, 212
BaeGI GKGCMC 1 cut(s) 872
BanI GGYRCC 2 cut(s) 617, 944
BanII GRGCYC 2 cut(s) 294, 872
BbsI GAAGAC 5 cut(s) 321, 492, 671, 897, 969
BbvI GCAGC 1 cut(s) 268
BccI CCATC 4 cut(s) 55, 532, 605, 880
BceAI ACGGC 3 cut(s) 480, 843, 932
BclI TGATCA 1 cut(s) 175
BcnI CCSGG 1 cut(s) 218
BcuI ACTAGT 1 cut(s) 389
BfaI CTAG 4 cut(s) 143, 213, 390, 749
BfoI RGCGCY 1 cut(s) 948
BfuAI ACCTGC 1 cut(s) 694
BisI GCNGC 4 cut(s) 171, 257, 621, 846
BlpI GCTNAGC 1 cut(s) 987
BlsI GCNGC 4 cut(s) 172, 258, 622, 847
Bme1390I CCNGG 1 cut(s) 218
BmgT120I GGNCC 2 cut(s) 868, 869
BmiI GGNNCC 3 cut(s) 619, 870, 946
BmrFI CCNGG 1 cut(s) 218
BmrI ACTGGG 2 cut(s) 288, 909
BmsI GCATC 2 cut(s) 367, 393
BmtI GCTAGC 2 cut(s) 146, 216
BmuI ACTGGG 2 cut(s) 288, 909
BpiI GAAGAC 5 cut(s) 321, 492, 671, 897, 969
BpmI CTGGAG 1 cut(s) 516
Bpu1102I GCTNAGC 1 cut(s) 987
BpuMI CCSGG 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 945
BsaJI CCNNGG 3 cut(s) 462, 621, 981
Bsc4I CCNNNNNNNGG 2 cut(s) 882, 927
Bse1I ACTGG 4 cut(s) 294, 477, 904, 916
Bse3DI GCAATG 1 cut(s) 355
BseDI CCNNGG 3 cut(s) 462, 621, 981
BseGI GGATG 7 cut(s) 70, 160, 166, 458, 787, 872, 936
BseLI CCNNNNNNNGG 2 cut(s) 882, 927
BseMI GCAATG 1 cut(s) 355
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 4 cut(s) 294, 477, 904, 916
BseSI GKGCMC 1 cut(s) 872
BseXI GCAGC 1 cut(s) 268
BseYI CCCAGC 1 cut(s) 508
Bsh1236I CGCG 2 cut(s) 170, 623
BshFI GGCC 2 cut(s) 845, 870
BshNI GGYRCC 2 cut(s) 617, 944
BsiSI CCGG 1 cut(s) 217
BslI CCNNNNNNNGG 2 cut(s) 882, 927
BsmI GAATGC 1 cut(s) 72
BsnI GGCC 2 cut(s) 845, 870
Bsp120I GGGCCC 1 cut(s) 868
Bsp1286I GDGCHC 2 cut(s) 294, 872
Bsp143I GATC 3 cut(s) 175, 232, 716
Bsp1720I GCTNAGC 1 cut(s) 987
BspACI CCGC 7 cut(s) 170, 311, 467, 570, 621, 623, 846
BspANI GGCC 2 cut(s) 845, 870
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 2 cut(s) 170, 623
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 3 cut(s) 619, 870, 946
BspMI ACCTGC 1 cut(s) 694
BspOI GCTAGC 2 cut(s) 146, 216
BspPI GGATC 1 cut(s) 724
BspQI GCTCTTC 1 cut(s) 132
BspT107I GGYRCC 2 cut(s) 617, 944
BsrDI GCAATG 1 cut(s) 355
BsrI ACTGG 4 cut(s) 294, 477, 904, 916
BssECI CCNNGG 3 cut(s) 462, 621, 981
BssMI GATC 3 cut(s) 175, 232, 716
BssNI GRCGYC 1 cut(s) 945
BssT1I CCWWGG 1 cut(s) 981
Bst4CI ACNGT 4 cut(s) 51, 496, 816, 955
Bst6I CTCTTC 1 cut(s) 132
BstACI GRCGYC 1 cut(s) 945
BstC8I GCNNGC 5 cut(s) 144, 148, 214, 382, 801
BstDEI CTNAG 5 cut(s) 123, 413, 522, 720, 987
BstDSI CCRYGG 2 cut(s) 462, 621
BstF5I GGATG 7 cut(s) 70, 160, 166, 458, 787, 872, 936
BstFNI CGCG 2 cut(s) 170, 623
BstH2I RGCGCY 1 cut(s) 948
BstHHI GCGC 2 cut(s) 927, 947
BstKTI GATC 3 cut(s) 178, 235, 719
BstMBI GATC 3 cut(s) 175, 232, 716
BstMWI GCNNNNNNNGC 3 cut(s) 213, 308, 695
BstNSI RCATGY 2 cut(s) 311, 407
BstSCI CCNGG 1 cut(s) 216
BstSLI GKGCMC 1 cut(s) 872
BstUI CGCG 2 cut(s) 170, 623
BstV1I GCAGC 1 cut(s) 268
BstV2I GAAGAC 5 cut(s) 321, 492, 671, 897, 969
BstX2I RGATCY 1 cut(s) 716
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 1 cut(s) 716
BsuRI GGCC 2 cut(s) 845, 870
BtgI CCRYGG 2 cut(s) 462, 621
BtsCI GGATG 7 cut(s) 70, 160, 166, 458, 787, 872, 936
BtsIMutI CAGTG 3 cut(s) 301, 501, 897
BveI ACCTGC 1 cut(s) 694
Cac8I GCNNGC 5 cut(s) 144, 148, 214, 382, 801
CciI TCATGA 1 cut(s) 373
CfoI GCGC 2 cut(s) 927, 947
Cfr13I GGNCC 2 cut(s) 868, 869
Cfr42I CCGCGG 1 cut(s) 624
CseI GACGC 1 cut(s) 962
Csp6I GTAC 1 cut(s) 410
CspCI CAANNNNNGTGG 2 cut(s) 627, 662
CviAII CATG 7 cut(s) 151, 308, 374, 404, 419, 490, 922
CviQI GTAC 1 cut(s) 410
DdeI CTNAG 5 cut(s) 123, 413, 522, 720, 987
DinI GGCGCC 1 cut(s) 946
DpnI GATC 3 cut(s) 177, 234, 718
DpnII GATC 3 cut(s) 175, 232, 716
DraI TTTAAA 1 cut(s) 820
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
EciI GGCGGA 1 cut(s) 482
Eco130I CCWWGG 1 cut(s) 981
Eco24I GRGCYC 2 cut(s) 294, 872
Eco32I GATATC 1 cut(s) 587
Eco57I CTGAAG 1 cut(s) 328
EcoRV GATATC 1 cut(s) 587
EcoT14I CCWWGG 1 cut(s) 981
EcoT38I GRGCYC 2 cut(s) 294, 872
EgeI GGCGCC 1 cut(s) 946
EheI GGCGCC 1 cut(s) 946
ErhI CCWWGG 1 cut(s) 981
FaeI CATG 7 cut(s) 154, 311, 377, 407, 422, 493, 925
FatI CATG 7 cut(s) 150, 307, 373, 403, 418, 489, 921
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 4 cut(s) 171, 257, 621, 846
FokI GGATG 7 cut(s) 77, 167, 173, 445, 794, 859, 943
FriOI GRGCYC 2 cut(s) 294, 872
Fsp4HI GCNGC 4 cut(s) 171, 257, 621, 846
FspBI CTAG 4 cut(s) 143, 213, 390, 749
FspI TGCGCA 1 cut(s) 926
GlaI GCGC 2 cut(s) 926, 946
GluI GCNGC 4 cut(s) 171, 257, 621, 846
GsaI CCCAGC 1 cut(s) 512
GsuI CTGGAG 1 cut(s) 516
HaeII RGCGCY 1 cut(s) 948
HaeIII GGCC 2 cut(s) 845, 870
HapII CCGG 1 cut(s) 217
HgaI GACGC 1 cut(s) 962
HhaI GCGC 2 cut(s) 927, 947
Hin1I GRCGYC 1 cut(s) 945
Hin1II CATG 7 cut(s) 154, 311, 377, 407, 422, 493, 925
Hin6I GCGC 2 cut(s) 925, 945
HinP1I GCGC 2 cut(s) 925, 945
HindIII AAGCTT 1 cut(s) 989
HinfI GANTC 8 cut(s) 119, 125, 198, 430, 455, 742, 965, 998
HpaII CCGG 1 cut(s) 217
HphI GGTGA 3 cut(s) 559, 637, 751
Hpy188I TCNGA 5 cut(s) 124, 133, 877, 885, 970
Hpy188III TCNNGA 4 cut(s) 374, 533, 714, 772
HpyAV CCTTC 3 cut(s) 353, 405, 473
HpyCH4III ACNGT 4 cut(s) 51, 496, 816, 955
HpyCH4V TGCA 3 cut(s) 98, 380, 698
HpyF10VI GCNNNNNNNGC 3 cut(s) 213, 308, 695
HpyF3I CTNAG 5 cut(s) 123, 413, 522, 720, 987
Hsp92I GRCGYC 1 cut(s) 945
Hsp92II CATG 7 cut(s) 154, 311, 377, 407, 422, 493, 925
HspAI GCGC 2 cut(s) 925, 945
KasI GGCGCC 1 cut(s) 944
Ksp22I TGATCA 1 cut(s) 175
KspI CCGCGG 1 cut(s) 624
Kzo9I GATC 3 cut(s) 175, 232, 716
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 2 cut(s) 40, 970
Lsp1109I GCAGC 1 cut(s) 268
LweI GCATC 2 cut(s) 367, 393
MaeI CTAG 4 cut(s) 143, 213, 390, 749
MaeIII GTNAC 4 cut(s) 28, 329, 916, 949
MalI GATC 3 cut(s) 177, 234, 718
MboI GATC 3 cut(s) 175, 232, 716
MflI RGATCY 1 cut(s) 716
MhlI GDGCHC 2 cut(s) 294, 872
MluCI AATT 3 cut(s) 591, 879, 906
Mly113I GGCGCC 1 cut(s) 945
MlyI GAGTC 5 cut(s) 134, 439, 464, 959, 992
MnlI CCTC 9 cut(s) 38, 97, 127, 415, 574, 772, 778, 835, 879
MroXI GAANNNNTTC 1 cut(s) 72
MseI TTAA 4 cut(s) 267, 756, 819, 1008
MslI CAYNNNNRTG 2 cut(s) 155, 494
MspA1I CMGCKG 1 cut(s) 623
MspI CCGG 1 cut(s) 217
MspR9I CCNGG 1 cut(s) 218
Mva1269I GAATGC 1 cut(s) 72
MvnI CGCG 2 cut(s) 170, 623
MwoI GCNNNNNNNGC 3 cut(s) 213, 308, 695
NarI GGCGCC 1 cut(s) 945
NciI CCSGG 1 cut(s) 218
NdeII GATC 3 cut(s) 175, 232, 716
NheI GCTAGC 2 cut(s) 142, 212
NlaIII CATG 7 cut(s) 154, 311, 377, 407, 422, 493, 925
NlaIV GGNNCC 3 cut(s) 619, 870, 946
NmuCI GTSAC 2 cut(s) 329, 949
NsbI TGCGCA 1 cut(s) 926
NspI RCATGY 2 cut(s) 311, 407
PagI TCATGA 1 cut(s) 373
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 3 cut(s) 119, 198, 742
PkrI GCNGC 4 cut(s) 172, 258, 622, 847
PleI GAGTC 5 cut(s) 133, 438, 463, 959, 992
PluTI GGCGCC 1 cut(s) 948
PpsI GAGTC 5 cut(s) 133, 438, 463, 959, 992
PshBI ATTAAT 1 cut(s) 1008
PspFI CCCAGC 1 cut(s) 508
PspN4I GGNNCC 3 cut(s) 619, 870, 946
PspOMI GGGCCC 1 cut(s) 868
PspPI GGNCC 2 cut(s) 868, 869
PsuI RGATCY 1 cut(s) 716
RsaI GTAC 1 cut(s) 411
RsaNI GTAC 1 cut(s) 410
RseI CAYNNNNRTG 2 cut(s) 155, 494
SacII CCGCGG 1 cut(s) 624
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 4 cut(s) 267, 756, 819, 1008
SatI GCNGC 4 cut(s) 171, 257, 621, 846
Sau3AI GATC 3 cut(s) 175, 232, 716
Sau96I GGNCC 2 cut(s) 868, 869
SchI GAGTC 5 cut(s) 134, 439, 464, 959, 992
ScrFI CCNGG 1 cut(s) 218
SduI GDGCHC 2 cut(s) 294, 872
SfaNI GCATC 2 cut(s) 367, 393
SfoI GGCGCC 1 cut(s) 946
Sfr303I CCGCGG 1 cut(s) 624
SgrBI CCGCGG 1 cut(s) 624
SmiMI CAYNNNNRTG 2 cut(s) 155, 494
SpeI ACTAGT 1 cut(s) 389
Sse9I AATT 3 cut(s) 591, 879, 906
SsiI CCGC 7 cut(s) 170, 311, 467, 570, 621, 623, 846
SspDI GGCGCC 1 cut(s) 944
SspMI CTAG 4 cut(s) 143, 213, 390, 749
StyD4I CCNGG 1 cut(s) 216
StyI CCWWGG 1 cut(s) 981
TaaI ACNGT 4 cut(s) 51, 496, 816, 955
TaqI TCGA 2 cut(s) 90, 579
TasI AATT 3 cut(s) 591, 879, 906
TatI WGTACW 1 cut(s) 409
TauI GCSGC 3 cut(s) 173, 623, 848
TfiI GAWTC 3 cut(s) 119, 198, 742
Tru1I TTAA 4 cut(s) 267, 756, 819, 1008
Tru9I TTAA 4 cut(s) 267, 756, 819, 1008
TscAI CASTG 3 cut(s) 301, 501, 904
TseFI GTSAC 2 cut(s) 329, 949
TseI GCWGC 1 cut(s) 256
Tsp45I GTSAC 2 cut(s) 329, 949
TspDTI ATGAA 1 cut(s) 81
TspGWI ACGGA 1 cut(s) 683
TspRI CASTG 3 cut(s) 301, 501, 904
VspI ATTAAT 1 cut(s) 1008
XapI RAATTY 1 cut(s) 879
XceI RCATGY 2 cut(s) 311, 407
XcmI CCANNNNNNNNNTGG 1 cut(s) 469
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 4 cut(s) 143, 213, 390, 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.