Rh3BG359800

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
43240607 .. 43265453
24847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG359800.1

Sequence Viewer

Length: 2127 bp
ATGAACTTGTCTGATCCTAGGGCCCGAAGGAGGTATATGTTTCATGACCAGAGGAGGGAGCCAGTTTATGACAGTCAGGATGAGGATGCATACGATATGACAATGCCACCGGCTTTGAAGGCCTCATCGTCATCTACTTCAAAAGTACCGCCGGCTAGTGCTGTGATTCTGTGCAGCCGTTGCAACTATGAGGTAACCCTCAATAATCTTCTGCAAATCAAAAACCAAGAGTTAGCTACTGATCGACAGGTAAAGCCTGAGTTAAAAGCCCCAACTAACTGTGAAGAAAGTAAGAAGAGAGACTCAGGAGGGAAACATGCTGGCAATGAATTGGGGACTCCCACGGCCAATTTGGCCGAGGATGAAGTACTTAAGCTCTTTGGCCCTCACAGTCCCAAGGGATGTTATCAGGGACAACAAACTTCCCAAAGTGTGTTTAAGAGGATAAAGGAATCTGAAAACGCCGAAAGCGGACGACTTTCGGTGAGGAGAAGGTTGACTTTTGAAGATGATGATCTTGAGGGAAATTTTGTTGATGGTTTTAATGGCCGACGACGATCAGGTTTTGACCAAGATGATCGATTTTATGACCAAGATTATTTTGCCAGAAATAGAGGCCGAAGACCTTATAGGACATATCGGCCACCAGTTACTCATGATAATAGGTGGTATGGCCGAGCGGCCAGAGATCAACCATTTTCCCCTTTGACAAAAACTGAAAAGAGACGTATGCAAAGGGAAGTGGCGGCCGCAAGGCAGCAAGGGTCAGAAGGGCAGGAAGTCAGACGCTCTACAGAAGCAGACAACAAAGAAGCCCCTATAATAAGAAAGGACTTTCATAAGGATTCAGGAGAACCTATGGAACTTGAGACCATCGGTGACCATTTTAAAAATGTCCTTAGCTTCCCAAAGCTACCCCTTCTGCGGTTTACTGAAGGAGGGGTTAAGGTCTTCAAACATCTCAACCCTCCATTTAAGTTGGCTGAATTAGAAACAATGAGAAAGTTTCACCAGAAACATTCAGCCCTTGCAATTTATGGGCTTCCAAGGAGTCAAGACTATATTCTCAATACAATAGTAGCAAATTCTGATGCCGATCATGCTCTGATTTGGCAGGGTTTCCATAGCCGATTCATTACACCTGCTTTAAAAGCTTTGTATCAAGCACATCGCAAAGGAATCCAAAAGAAGGATATAGTCGCTCAAATTCCAATTTCAGAAGCCGACTTTCATTTCCTTAGATGTTTTCATAGAAGTCACTCGGCTGAGGAAACCTATGGCATAACGCCAGAGGAGGTCCAGCTTGCAAGGGAACTTGATGATTATTTAGAAAAGAAAGACTTCGCAACTGAAGAGCAAGCGAAAGTCGATGCCAAAGCTAAGGATATTGAACAACAGAAGGAAGTACAGAAAGCGGCTATGGATAAGACGCCAAATGGAAAAGTCCCTACCATAAGAGTACTGAGAGGACAGGATCCGCCATTCTCAAATCAAGATCTAGGGATGATGAAAAAGTATCATAGGATGTATTCAGCATTGGCCACTTATGGCCTAACTGAGGAGGAAAGTACGATGATGAAAATGTTAGAAAAGGATATGTCTTCAGAGTCATACCTCATCACTGAGGATTCTAGCATCGGCTTAAAAATCAGTTATCAGGCAATGATGGAGAATTGTAAGCTGAAAGCCAATACTGATAACTTACCTATTTCTGATGCTGACCTGACTTACCTCCGCACCTACCATAAACAACATCCAGCTGCTGAGATTTATGGATTCACATCCGCCGAGAGCAAATTACTAGATAATTTGTCTAAATACTTGCGGGCTCGTGCAATCGAGTGGCAAGCAGAGACAGAGAAGGCATCCACCAAGCTGACAACTGGGGCCATTGAAGAATTGAAGAAAGAACAAGCCAGTCTCAATCAGCAGCTGAAGGATGAGGAAATGGTAGAAGGTGCTGCCACGAACGATGGTAAGCAAGACGATTTTGAAGACGAGGGTGATGAGGAAGTCGATTATGGGGAAGAAGAGGAACAAGGGCGAGGCCGCCTTTGGAAAAGGAGAAGAACTTTCCTTGTCATAAGAAAAGGTTCTGCATATCCATTTGAACTTTTTCTTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

708

Amino Acids

81.26

Weight (kDa)

6.37

Isoelectric Point (pI)

54.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000560)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21400 FvH4_1g29793 FvH4_2g35581 FvH4_4g18554 FvH4_6g21671
pyrus_communis pycom11g14070
rosa_chinensis RchiOBHm_Chr6g0263201
rosa_laevigata RLG00000001861 RLG00000002050 RLG00000018783 RLG00000022649 RLG00000030152
rosa_multiflora Rmu_co8107100.1_g000001 Rmu_sc0000805.1_g000009 Rmu_sc0001347.1_g000002 Rmu_sc0001896.1_g000004 Rmu_sc0002170.1_g000040 Rmu_sc0002413.1_g000005 Rmu_sc0002489.1_g000053 Rmu_sc0002942.1_g000015 Rmu_sc0003071.1_g000022 Rmu_sc0003623.1_g000021 Rmu_sc0004063.1_g000005 Rmu_sc0004574.1_g000014 Rmu_sc0004723.1_g000009 Rmu_sc0005177.1_g000013 Rmu_sc0005994.1_g000011 Rmu_sc0006163.1_g000006 Rmu_sc0006583.1_g000008 Rmu_sc0008303.1_g000005 Rmu_sc0009027.1_g000002 Rmu_sc0009027.1_g000003 Rmu_sc0011790.1_g000009 Rmu_sc0011833.1_g000005 Rmu_sc0013493.1_g000006 Rmu_sc0016701.1_g000002 Rmu_sc0022033.1_g000001 Rmu_sc0022185.1_g000001 Rmu_sc0027245.1_g000005 Rmu_sc0030292.1_g000002 Rmu_ssc0000242.1_g000003
rosa_roxburghii Rroxscaffold_1G00015200 Rroxscaffold_1G00059290 Rroxscaffold_2G00079850 Rroxscaffold_2G00079860 Rroxscaffold_2G00107520 Rroxscaffold_2G00123420 Rroxscaffold_2G00123430 Rroxscaffold_3G00265790 Rroxscaffold_5G00335960 Rroxscaffold_5G00338270 Rroxscaffold_5G00343980 Rroxscaffold_5G00343990
rosa_samantha Rh1AG036500 Rh1DG429900 Rh2AG172600 Rh2AG610900 Rh2BG180200 Rh2BG180300 Rh2BG340600 Rh2BG400300 Rh2BG468400 Rh2BG478200 Rh2BG612500 Rh2BG612600 Rh3BG290000 Rh3BG290100 Rh3BG345200 Rh3BG345300 Rh3BG359800 Rh3CG291300 Rh4CG156300 Rh4CG264600 Rh5AG430300 Rh5BG185400 Rh6DG198700 Rh7CG199900 Rh7CG200000 Rh7CG370300 Rh7CG370600 Rh7CG395500 Rh7DG405800 Rh7DG405900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1150
Acc36I ACCTGC 1 cut(s) 1150
AccBSI CCGCTC 1 cut(s) 680
AclWI GGATC 3 cut(s) 8, 1469, 1482
AcoI YGGCCR 8 cut(s) 345, 354, 547, 641, 673, 681, 747, 1539
AcsI RAATTY 3 cut(s) 526, 1084, 1206
AcuI CTGAAG 4 cut(s) 954, 1371, 1587, 1955
AcyI GRCGYC 1 cut(s) 1430
AfaI GTAC 5 cut(s) 147, 369, 1407, 1461, 1570
AfiI CCNNNNNNNGG 5 cut(s) 30, 55, 924, 1189, 1558
AflII CTTAAG 1 cut(s) 371
AgsI TTSAA 9 cut(s) 118, 141, 506, 955, 1391, 1895, 1903, 1994, 2111
Alw26I GTCTC 5 cut(s) 294, 718, 863, 1847, 1925
AlwI GGATC 3 cut(s) 8, 1469, 1482
AlwNI CAGNNNCTG 2 cut(s) 1763, 1933
ApaI GGGCCC 1 cut(s) 25
ApeKI GCWGC 5 cut(s) 174, 757, 1760, 1930, 1961
ApoI RAATTY 3 cut(s) 526, 1084, 1206
Asp700I GAANNNNTTC 3 cut(s) 1340, 2092, 2115
AspA2I CCTAGG 1 cut(s) 17
AspS9I GGNCC 5 cut(s) 21, 22, 383, 1297, 1887
AsuHPI GGTGA 4 cut(s) 496, 890, 1001, 2015
AvaII GGWCC 1 cut(s) 1297
AvrII CCTAGG 1 cut(s) 17
BaeGI GKGCMC 1 cut(s) 25
BalI TGGCCA 1 cut(s) 1541
BamHI GGATCC 1 cut(s) 1474
BanII GRGCYC 2 cut(s) 25, 1831
BauI CACGAG 1 cut(s) 1830
BbsI GAAGAC 4 cut(s) 628, 943, 1593, 2001
BbvCI CCTCAGC 1 cut(s) 1266
BbvI GCAGC 5 cut(s) 186, 769, 1747, 1942, 1948
BccI CCATC 4 cut(s) 530, 881, 1660, 1967
BceAI ACGGC 2 cut(s) 162, 360
BcoDI GTCTC 5 cut(s) 294, 718, 863, 1847, 1925
BfaI CTAG 5 cut(s) 18, 156, 1499, 1632, 1802
BfmI CTRYAG 1 cut(s) 792
BfrI CTTAAG 1 cut(s) 371
BfuAI ACCTGC 1 cut(s) 1150
BglI GCCNNNNNGGC 1 cut(s) 353
BglII AGATCT 1 cut(s) 1495
BlnI CCTAGG 1 cut(s) 17
BmcAI AGTACT 2 cut(s) 369, 1461
Bme18I GGWCC 1 cut(s) 1297
BmgT120I GGNCC 5 cut(s) 21, 22, 383, 1297, 1887
BmiI GGNNCC 4 cut(s) 23, 60, 1476, 1888
BmrI ACTGGG 1 cut(s) 1893
BmsI GCATC 6 cut(s) 76, 1081, 1360, 1644, 1705, 1874
BmuI ACTGGG 1 cut(s) 1893
BpiI GAAGAC 4 cut(s) 628, 943, 1593, 2001
Bpu10I CCTNAGC 3 cut(s) 899, 1266, 1380
BpuEI CTTGAG 2 cut(s) 539, 887
Bsa29I ATCGAT 1 cut(s) 580
BsaBI GATNNNNATC 3 cut(s) 513, 1095, 1780
BsaHI GRCGYC 1 cut(s) 1430
BsaI GGTCTC 1 cut(s) 863
BsaJI CCNNGG 5 cut(s) 17, 342, 357, 396, 1046
Bsc4I CCNNNNNNNGG 5 cut(s) 30, 55, 924, 1189, 1558
Bse118I RCCGGY 2 cut(s) 109, 151
Bse1I ACTGG 4 cut(s) 62, 647, 1888, 1917
Bse3DI GCAATG 2 cut(s) 331, 1668
Bse8I GATNNNNATC 3 cut(s) 513, 1095, 1780
BseCI ATCGAT 1 cut(s) 580
BseDI CCNNGG 5 cut(s) 17, 342, 357, 396, 1046
BseJI GATNNNNATC 3 cut(s) 513, 1095, 1780
BseLI CCNNNNNNNGG 5 cut(s) 30, 55, 924, 1189, 1558
BseMI GCAATG 2 cut(s) 331, 1668
BseMII CTCAG 7 cut(s) 249, 318, 1257, 1454, 1548, 1614, 1755
BseNI ACTGG 4 cut(s) 62, 647, 1888, 1917
BseRI GAGGAG 4 cut(s) 67, 502, 1307, 1574
BseSI GKGCMC 1 cut(s) 25
BseX3I CGGCCG 1 cut(s) 747
BseXI GCAGC 5 cut(s) 186, 769, 1747, 1942, 1948
BsgI GTGCAG 1 cut(s) 193
Bsh1285I CGRYCG 1 cut(s) 750
BshVI ATCGAT 1 cut(s) 580
BsiEI CGRYCG 1 cut(s) 750
BsiSI CCGG 2 cut(s) 110, 152
BslFI GGGAC 4 cut(s) 349, 378, 426, 1430
BslI CCNNNNNNNGG 5 cut(s) 30, 55, 924, 1189, 1558
BsmAI GTCTC 5 cut(s) 294, 718, 863, 1847, 1925
BsmBI CGTCTC 1 cut(s) 718
BsmFI GGGAC 4 cut(s) 349, 378, 426, 1430
Bso31I GGTCTC 1 cut(s) 863
Bsp120I GGGCCC 1 cut(s) 21
Bsp1286I GDGCHC 2 cut(s) 25, 1831
Bsp143I GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
BspCNI CTCAG 7 cut(s) 250, 317, 1258, 1455, 1549, 1615, 1756
BspDI ATCGAT 1 cut(s) 580
BspHI TCATGA 2 cut(s) 43, 655
BspLI GGNNCC 4 cut(s) 23, 60, 1476, 1888
BspMI ACCTGC 1 cut(s) 1150
BspPI GGATC 3 cut(s) 8, 1469, 1482
BspQI GCTCTTC 1 cut(s) 1347
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 863
BsrBI CCGCTC 1 cut(s) 680
BsrDI GCAATG 2 cut(s) 331, 1668
BsrFI RCCGGY 2 cut(s) 109, 151
BsrI ACTGG 4 cut(s) 62, 647, 1888, 1917
BssAI RCCGGY 2 cut(s) 109, 151
BssECI CCNNGG 5 cut(s) 17, 342, 357, 396, 1046
BssMI GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
BssNI GRCGYC 1 cut(s) 1430
BssSI CACGAG 1 cut(s) 1830
BssT1I CCWWGG 3 cut(s) 17, 396, 1046
Bst2BI CACGAG 1 cut(s) 1830
Bst4CI ACNGT 3 cut(s) 74, 281, 392
Bst6I CTCTTC 3 cut(s) 290, 1347, 2025
BstACI GRCGYC 1 cut(s) 1430
BstAFI CTTAAG 1 cut(s) 371
BstAPI GCANNNNNTGC 1 cut(s) 180
BstC8I GCNNGC 6 cut(s) 153, 322, 1305, 1359, 1827, 1848
BstDSI CCRYGG 1 cut(s) 342
BstEII GGTNACC 2 cut(s) 193, 878
BstENI CCTNNNNNAGG 1 cut(s) 1556
BstKTI GATC 9 cut(s) 16, 244, 517, 560, 580, 691, 1099, 1477, 1498
BstMAI GTCTC 5 cut(s) 294, 718, 863, 1847, 1925
BstMBI GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
BstMCI CGRYCG 1 cut(s) 750
BstMWI GCNNNNNNNGC 5 cut(s) 119, 180, 353, 1100, 1151
BstNSI RCATGY 1 cut(s) 320
BstPI GGTNACC 2 cut(s) 193, 878
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 25
BstV1I GCAGC 5 cut(s) 186, 769, 1747, 1942, 1948
BstV2I GAAGAC 4 cut(s) 628, 943, 1593, 2001
BstX2I RGATCY 2 cut(s) 1474, 1495
BstYI RGATCY 2 cut(s) 1474, 1495
BstZI CGGCCG 1 cut(s) 747
Bsu15I ATCGAT 1 cut(s) 580
BsuTUI ATCGAT 1 cut(s) 580
BtgI CCRYGG 1 cut(s) 342
BtgZI GCGATG 1 cut(s) 1154
BtsIMutI CAGTG 1 cut(s) 1620
BveI ACCTGC 1 cut(s) 1150
Cac8I GCNNGC 6 cut(s) 153, 322, 1305, 1359, 1827, 1848
CaiI CAGNNNCTG 2 cut(s) 1763, 1933
CciI TCATGA 2 cut(s) 43, 655
CciNI GCGGCCGC 1 cut(s) 747
Cfr10I RCCGGY 2 cut(s) 109, 151
Cfr13I GGNCC 5 cut(s) 21, 22, 383, 1297, 1887
ClaI ATCGAT 1 cut(s) 580
CseI GACGC 2 cut(s) 795, 1438
Csp6I GTAC 5 cut(s) 146, 368, 1406, 1460, 1569
CspCI CAANNNNNGTGG 2 cut(s) 96, 131
CviAII CATG 4 cut(s) 44, 317, 656, 1100
CviQI GTAC 5 cut(s) 146, 368, 1406, 1460, 1569
DpnI GATC 9 cut(s) 15, 243, 516, 559, 579, 690, 1098, 1476, 1497
DpnII GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
DraI TTTAAA 2 cut(s) 889, 1149
EaeI YGGCCR 8 cut(s) 345, 354, 547, 641, 673, 681, 747, 1539
EagI CGGCCG 1 cut(s) 747
Eam1104I CTCTTC 3 cut(s) 290, 1347, 2025
EarI CTCTTC 3 cut(s) 290, 1347, 2025
EciI GGCGGA 2 cut(s) 1467, 1774
EclXI CGGCCG 1 cut(s) 747
Eco130I CCWWGG 3 cut(s) 17, 396, 1046
Eco147I AGGCCT 1 cut(s) 122
Eco24I GRGCYC 2 cut(s) 25, 1831
Eco31I GGTCTC 1 cut(s) 863
Eco47I GGWCC 1 cut(s) 1297
Eco52I CGGCCG 1 cut(s) 747
Eco57I CTGAAG 4 cut(s) 954, 1371, 1587, 1955
Eco91I GGTNACC 2 cut(s) 193, 878
EcoNI CCTNNNNNAGG 1 cut(s) 1556
EcoO109I RGGNCCY 1 cut(s) 21
EcoO65I GGTNACC 2 cut(s) 193, 878
EcoT14I CCWWGG 3 cut(s) 17, 396, 1046
EcoT22I ATGCAT 1 cut(s) 91
EcoT38I GRGCYC 2 cut(s) 25, 1831
ErhI CCWWGG 3 cut(s) 17, 396, 1046
Esp3I CGTCTC 1 cut(s) 718
FaeI CATG 4 cut(s) 47, 320, 659, 1103
FalI AAGNNNNNCTT 4 cut(s) 484, 516, 1325, 1357
FaqI GGGAC 4 cut(s) 349, 378, 426, 1430
FatI CATG 4 cut(s) 43, 316, 655, 1099
FauI CCCGC 1 cut(s) 1818
FriOI GRGCYC 2 cut(s) 25, 1831
FspBI CTAG 5 cut(s) 18, 156, 1499, 1632, 1802
HapII CCGG 2 cut(s) 110, 152
HgaI GACGC 2 cut(s) 795, 1438
Hin1I GRCGYC 1 cut(s) 1430
Hin1II CATG 4 cut(s) 47, 320, 659, 1103
HincII GTYRAC 1 cut(s) 498
HindII GTYRAC 1 cut(s) 498
HindIII AAGCTT 1 cut(s) 1152
HpaII CCGG 2 cut(s) 110, 152
HphI GGTGA 4 cut(s) 496, 890, 1001, 2015
Hpy166II GTNNAC 2 cut(s) 498, 930
Hpy188I TCNGA 9 cut(s) 13, 457, 769, 785, 1090, 1107, 1219, 1606, 1714
Hpy188III TCNNGA 8 cut(s) 44, 77, 306, 518, 656, 849, 1055, 1493
Hpy8I GTNNAC 2 cut(s) 498, 930
Hpy99I CGWCG 2 cut(s) 555, 558
HpyCH4III ACNGT 3 cut(s) 74, 281, 392
HpyCH4IV ACGT 1 cut(s) 727
HpyCH4V TGCA 9 cut(s) 89, 174, 183, 214, 733, 1031, 1307, 1835, 2099
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 180, 353, 1100, 1151
HpySE526I ACGT 1 cut(s) 727
Hsp92I GRCGYC 1 cut(s) 1430
Hsp92II CATG 4 cut(s) 47, 320, 659, 1103
KroI GCCGGC 1 cut(s) 151
KroNI GCCGGC 1 cut(s) 153
Kzo9I GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
LguI GCTCTTC 1 cut(s) 1347
LmnI GCTCC 1 cut(s) 58
Lsp1109I GCAGC 5 cut(s) 186, 769, 1747, 1942, 1948
LweI GCATC 6 cut(s) 76, 1081, 1360, 1644, 1705, 1874
MaeI CTAG 5 cut(s) 18, 156, 1499, 1632, 1802
MaeII ACGT 1 cut(s) 727
MaeIII GTNAC 4 cut(s) 193, 649, 878, 1256
MalI GATC 9 cut(s) 15, 243, 516, 559, 579, 690, 1098, 1476, 1497
MbiI CCGCTC 1 cut(s) 680
MboI GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
MflI RGATCY 2 cut(s) 1474, 1495
MhlI GDGCHC 2 cut(s) 25, 1831
MlsI TGGCCA 1 cut(s) 1541
MluNI TGGCCA 1 cut(s) 1541
MlyI GAGTC 4 cut(s) 296, 331, 1060, 1616
Mox20I TGGCCA 1 cut(s) 1541
Mph1103I ATGCAT 1 cut(s) 91
MroNI GCCGGC 1 cut(s) 151
MroXI GAANNNNTTC 3 cut(s) 1340, 2092, 2115
MscI TGGCCA 1 cut(s) 1541
MseI TTAA 9 cut(s) 263, 372, 438, 543, 888, 945, 975, 1148, 1643
Msp20I TGGCCA 1 cut(s) 1541
MspA1I CMGCKG 2 cut(s) 1760, 1933
MspCI CTTAAG 1 cut(s) 371
MspI CCGG 2 cut(s) 110, 152
MwoI GCNNNNNNNGC 5 cut(s) 119, 180, 353, 1100, 1151
NaeI GCCGGC 1 cut(s) 153
NdeII GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
NgoMIV GCCGGC 1 cut(s) 151
NlaIII CATG 4 cut(s) 47, 320, 659, 1103
NlaIV GGNNCC 4 cut(s) 23, 60, 1476, 1888
NmeAIII GCCGAG 4 cut(s) 382, 701, 1241, 1813
NmuCI GTSAC 2 cut(s) 878, 1256
NotI GCGGCCGC 1 cut(s) 747
NsiI ATGCAT 1 cut(s) 91
NspI RCATGY 1 cut(s) 320
PagI TCATGA 2 cut(s) 43, 655
PaqCI CACCTGC 1 cut(s) 1150
PceI AGGCCT 1 cut(s) 122
PciSI GCTCTTC 1 cut(s) 1347
PdiI GCCGGC 1 cut(s) 153
PdmI GAANNNNTTC 3 cut(s) 1340, 2092, 2115
PfeI GAWTC 7 cut(s) 166, 452, 845, 1131, 1179, 1628, 1776
PleI GAGTC 4 cut(s) 296, 331, 1059, 1615
PpsI GAGTC 4 cut(s) 296, 331, 1059, 1615
PspEI GGTNACC 2 cut(s) 193, 878
PspN4I GGNNCC 4 cut(s) 23, 60, 1476, 1888
PspOMI GGGCCC 1 cut(s) 21
PspPI GGNCC 5 cut(s) 21, 22, 383, 1297, 1887
PstNI CAGNNNCTG 2 cut(s) 1763, 1933
PsuI RGATCY 2 cut(s) 1474, 1495
PvuII CAGCTG 2 cut(s) 1760, 1933
RsaI GTAC 5 cut(s) 147, 369, 1407, 1461, 1570
RsaNI GTAC 5 cut(s) 146, 368, 1406, 1460, 1569
SapI GCTCTTC 1 cut(s) 1347
SaqAI TTAA 9 cut(s) 263, 372, 438, 543, 888, 945, 975, 1148, 1643
Sau3AI GATC 9 cut(s) 13, 241, 514, 557, 577, 688, 1096, 1474, 1495
Sau96I GGNCC 5 cut(s) 21, 22, 383, 1297, 1887
ScaI AGTACT 2 cut(s) 369, 1461
SchI GAGTC 4 cut(s) 296, 331, 1060, 1616
SduI GDGCHC 2 cut(s) 25, 1831
SfaNI GCATC 6 cut(s) 76, 1081, 1360, 1644, 1705, 1874
SfcI CTRYAG 1 cut(s) 792
SfiI GGCCNNNNNGGCC 1 cut(s) 353
SinI GGWCC 1 cut(s) 1297
SmlI CTYRAG 3 cut(s) 371, 518, 866
SmoI CTYRAG 3 cut(s) 371, 518, 866
SseBI AGGCCT 1 cut(s) 122
SspMI CTAG 5 cut(s) 18, 156, 1499, 1632, 1802
StuI AGGCCT 1 cut(s) 122
StyI CCWWGG 3 cut(s) 17, 396, 1046
TaaI ACNGT 3 cut(s) 74, 281, 392
TaiI ACGT 1 cut(s) 730
TaqI TCGA 5 cut(s) 244, 580, 1368, 1839, 2016
TatI WGTACW 3 cut(s) 367, 1405, 1459
TauI GCSGC 5 cut(s) 683, 749, 752, 1418, 2052
TfiI GAWTC 7 cut(s) 166, 452, 845, 1131, 1179, 1628, 1776
Tru1I TTAA 9 cut(s) 263, 372, 438, 543, 888, 945, 975, 1148, 1643
Tru9I TTAA 9 cut(s) 263, 372, 438, 543, 888, 945, 975, 1148, 1643
TscAI CASTG 1 cut(s) 1627
TseFI GTSAC 2 cut(s) 878, 1256
TseI GCWGC 5 cut(s) 174, 757, 1760, 1930, 1961
Tsp45I GTSAC 2 cut(s) 878, 1256
TspRI CASTG 1 cut(s) 1627
Vha464I CTTAAG 1 cut(s) 371
VpaK11BI GGWCC 1 cut(s) 1297
XagI CCTNNNNNAGG 1 cut(s) 1556
XapI RAATTY 3 cut(s) 526, 1084, 1206
XceI RCATGY 1 cut(s) 320
XcmI CCANNNNNNNNNTGG 1 cut(s) 349
XmaJI CCTAGG 1 cut(s) 17
XmnI GAANNNNTTC 3 cut(s) 1340, 2092, 2115
XspI CTAG 5 cut(s) 18, 156, 1499, 1632, 1802
ZrmI AGTACT 2 cut(s) 369, 1461
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.