Rmu_sc0006583.1_g000008

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006583.1
OG0000560
Physical Location & Seq
Forward (+)
47417 .. 50583
3167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006583.1_g000008.1.cds

Sequence Viewer

Length: 2658 bp
atgatcagtgatgaaaaccgaaccttcgacggcgagatgaggactggaggtggccggaatcgccggaaatcggcaaaagcttcaaactgcaaccggggaggaatttccttcgatccgagctttttcggccaaatcgtccaaagatacctccacagacgtgaccggggaaagaaaccgagcttgggggtggccggattacgtccggagtcggccggaagaggaagaaatcgaaggggaaggaattcggccgagaggggaggaagagtcggggagagagagagagaaaagggggggtgggtttccggtttccgaaacctgtccaaagatacctccacaaacgtgaccggggaaagaaaccgagcttgggggtggccggattacgtccggagtcggccggaagaggaagaaatcgaaggggaaggaattcggccgagaggggaggaagagtcggggagagagagagagaaaagggggggtgggtttccggtttccgaaacctaccctgtcgacatggtgtacgtcaacttcccaagaggtcaccggaggaattggccaaatatgaacttgtctgatcctagggcccgaaggaggtatatgtttcgtgaccagaggagggaaccagtttatgatagtcaggatgaggatgcatacgatatgacaatgccaccggctttgaaggcctcatcgtcatctacttcaaaagtaccgccggccagcgctgtgattctgtgcagccgttgcaactgtgaggtaaccctcaataatcttctgcaaatcaagaaccaagagttagctactgatcgacaggtaaggcctgggttaaaagctccaactaattgtgaagaaagtaagaagaaagactcaggagggaaacatgctggcaatgaattggggactcccacggccaatatggccgaggatgaagtacttaagctctttggccctcacagtcccaagggatgttatcagggacaacaaacttcccaaagtttgtttaagaggataaaggaatctgaaaacgccgaaaacggacgactttcggtgaggagaaggttgacttttgaggatgatgatcttgagggaaattttgctgatggtttcaatggccgacgacgatcaggttttgaccaagatgatcgattttatgaccaagattattttgctagaaatagaggccgaagaccttataggacatatcggccaccagttactcatgataataggtggtatggccgagcggccagagatcagccattttcccctttgacaaaaactcaaaagagacctatgcaaagggaagtggcggccgcaaggcagcaagggtcagaagggcaggaagttagacgctctactgaagcagataacaaagaagcccctataataagagaagactttcataaggattcaggagaacctatggaacttgagaccatcggtgaccattttgaaaatgtccttagcttcccaaagctaccccatctacggtttactgaaggaggggttaaggtcttcaaacatctcaaccctccatttaagttggctgaattagaaacaatgagaaagtttcaccagaaacattcagcccttgcaatttatgggcttccaaggagtcaagactatattctcaatacaatagtagcaaattctgatgccgatcatgctctaattcggcagggtttccatagccgattcattacacctggtttaaaagctttgtatcaagcacatcgcaaaggaatccaaaagaaggatatagtcgctcaaattccagtttcagaagccgactttcatttccttagatgttttcatagaagtcactcggctgaggaaacctattgcatatcgctagaagaggcccaactcgcaagggaacttgatgattatttagaaaagaaagactttgcgactgaagagcaagcgaaagccgatgccaaagctaaggatattgaacaacagaaggaagtgcaaaaggcggctatggataagacgccaaatggaaaagtccctaccataagagtactgagaggacaggatcagccgttctcaaatcaagatctagggatgatgaaaaaatatcataggatgtactcagcattggccacttatggtctaactgaggaggaaagcgcgatggtgaaaatgttagaaaaggatatgtctttagagtcatacctcatcactgaggattctagcatcggcttaaaaatcagttatcaggcaatgatggagaattataaactggaagccaatactgataacttacctatttctgatgccgacctgacttacctccgcgcctaccataaacaacatccagctgctgagatttatggattcacgtccgccgagagcaaattattagataatttgtccaaatacttgctggctcgtgcaatcgattggcaatcagagacagagaaggcgtccaccaagctgacaattggggccattgaagaattgaagaaagagcaagccagtctcaatcagcagttgaaggatgaagaaatggtagaaggtgctgccacgaacaacggtaagcaagacgattatggagacaagggtgatgaggaagtcgattatggagaagaagaagaacaaggtgactacgataatgaagctggaatcgactacgacataggagatggccacagcttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

885

Amino Acids

100.77

Weight (kDa)

6.46

Isoelectric Point (pI)

51.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000560)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21400 FvH4_1g29793 FvH4_2g35581 FvH4_4g18554 FvH4_6g21671
pyrus_communis pycom11g14070
rosa_chinensis RchiOBHm_Chr6g0263201
rosa_laevigata RLG00000001861 RLG00000002050 RLG00000018783 RLG00000022649 RLG00000030152
rosa_multiflora Rmu_co8107100.1_g000001 Rmu_sc0000805.1_g000009 Rmu_sc0001347.1_g000002 Rmu_sc0001896.1_g000004 Rmu_sc0002170.1_g000040 Rmu_sc0002413.1_g000005 Rmu_sc0002489.1_g000053 Rmu_sc0002942.1_g000015 Rmu_sc0003071.1_g000022 Rmu_sc0003623.1_g000021 Rmu_sc0004063.1_g000005 Rmu_sc0004574.1_g000014 Rmu_sc0004723.1_g000009 Rmu_sc0005177.1_g000013 Rmu_sc0005994.1_g000011 Rmu_sc0006163.1_g000006 Rmu_sc0006583.1_g000008 Rmu_sc0008303.1_g000005 Rmu_sc0009027.1_g000002 Rmu_sc0009027.1_g000003 Rmu_sc0011790.1_g000009 Rmu_sc0011833.1_g000005 Rmu_sc0013493.1_g000006 Rmu_sc0016701.1_g000002 Rmu_sc0022033.1_g000001 Rmu_sc0022185.1_g000001 Rmu_sc0027245.1_g000005 Rmu_sc0030292.1_g000002 Rmu_ssc0000242.1_g000003
rosa_roxburghii Rroxscaffold_1G00015200 Rroxscaffold_1G00059290 Rroxscaffold_2G00079850 Rroxscaffold_2G00079860 Rroxscaffold_2G00107520 Rroxscaffold_2G00123420 Rroxscaffold_2G00123430 Rroxscaffold_3G00265790 Rroxscaffold_5G00335960 Rroxscaffold_5G00338270 Rroxscaffold_5G00343980 Rroxscaffold_5G00343990
rosa_samantha Rh1AG036500 Rh1DG429900 Rh2AG172600 Rh2AG610900 Rh2BG180200 Rh2BG180300 Rh2BG340600 Rh2BG400300 Rh2BG468400 Rh2BG478200 Rh2BG612500 Rh2BG612600 Rh3BG290000 Rh3BG290100 Rh3BG345200 Rh3BG345300 Rh3BG359800 Rh3CG291300 Rh4CG156300 Rh4CG264600 Rh5AG430300 Rh5BG185400 Rh6DG198700 Rh7CG199900 Rh7CG200000 Rh7CG370300 Rh7CG370600 Rh7CG395500 Rh7DG405800 Rh7DG405900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2235
AccBSI CCGCTC 1 cut(s) 1238
AccI GTMKAC 1 cut(s) 507
AccII CGCG 2 cut(s) 2129, 2295
AccIII TCCGGA 2 cut(s) 202, 384
AciI CCGC 7 cut(s) 707, 1238, 1304, 1308, 1973, 2293, 2343
AclWI GGATC 3 cut(s) 107, 566, 2040
AcsI RAATTY 6 cut(s) 102, 241, 423, 1084, 1642, 1764
AcuI CTGAAG 3 cut(s) 1374, 1512, 1929
AcyI GRCGYC 2 cut(s) 1988, 2423
AfaI GTAC 5 cut(s) 518, 705, 927, 2019, 2087
AfeI AGCGCT 1 cut(s) 718
AfiI CCNNNNNNNGG 7 cut(s) 70, 182, 364, 588, 613, 1482, 1747
AflII CTTAAG 1 cut(s) 929
AjiI CACGTC 2 cut(s) 158, 2340
AjnI CCWGG 2 cut(s) 814, 1699
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 346, 378
AleI CACNNNNGTG 2 cut(s) 156, 338
AloI GAACNNNNNNTCC 2 cut(s) 2024, 2056
Alw26I GTCTC 5 cut(s) 1276, 1421, 2405, 2483, 2547
AlwI GGATC 3 cut(s) 107, 566, 2040
AlwNI CAGNNNCTG 1 cut(s) 2321
Aor13HI TCCGGA 2 cut(s) 202, 384
Aor51HI AGCGCT 1 cut(s) 718
ApaI GGGCCC 1 cut(s) 583
ApeKI GCWGC 4 cut(s) 732, 1315, 2318, 2519
ApoI RAATTY 6 cut(s) 102, 241, 423, 1084, 1642, 1764
Asp700I GAANNNNTTC 3 cut(s) 241, 423, 1392
AspA2I CCTAGG 1 cut(s) 575
AspLEI GCGC 3 cut(s) 719, 2129, 2297
AspS9I GGNCC 5 cut(s) 579, 580, 941, 1855, 2445
AsuC2I CCSGG 3 cut(s) 95, 164, 346
AsuHPI GGTGA 7 cut(s) 530, 1054, 1448, 1559, 2146, 2573, 2612
AvrII CCTAGG 1 cut(s) 575
BaeGI GKGCMC 1 cut(s) 583
BalI TGGCCA 3 cut(s) 553, 2099, 2646
BanII GRGCYC 1 cut(s) 583
BarI GAAGNNNNNNTAC 2 cut(s) 509, 541
BauI CACGAG 1 cut(s) 2388
BbsI GAAGAC 3 cut(s) 1186, 1395, 1501
BbvCI CCTCAGC 1 cut(s) 1824
BbvI GCAGC 4 cut(s) 744, 1327, 2305, 2506
BccI CCATC 6 cut(s) 1088, 1439, 1485, 2125, 2218, 2636
BceAI ACGGC 4 cut(s) 46, 720, 918, 2023
BciT130I CCWGG 2 cut(s) 816, 1701
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 3 cut(s) 95, 164, 346
BcoDI GTCTC 5 cut(s) 1276, 1421, 2405, 2483, 2547
BfaI CTAG 5 cut(s) 576, 1164, 1847, 2057, 2190
BfoI RGCGCY 1 cut(s) 720
BfrI CTTAAG 1 cut(s) 929
BglI GCCNNNNNGGC 1 cut(s) 911
BglII AGATCT 1 cut(s) 2053
BisI GCNGC 8 cut(s) 733, 1239, 1305, 1308, 1316, 1974, 2319, 2520
BlnI CCTAGG 1 cut(s) 575
BlsI GCNGC 8 cut(s) 734, 1240, 1306, 1309, 1317, 1975, 2320, 2521
BmcAI AGTACT 2 cut(s) 927, 2019
Bme1390I CCNGG 5 cut(s) 95, 164, 346, 816, 1701
BmgBI CACGTC 2 cut(s) 158, 2340
BmgT120I GGNCC 5 cut(s) 579, 580, 941, 1855, 2445
BmiI GGNNCC 3 cut(s) 581, 618, 2446
BmrFI CCNGG 5 cut(s) 95, 164, 346, 816, 1701
BmsI GCATC 5 cut(s) 634, 1639, 1918, 2202, 2263
BpiI GAAGAC 3 cut(s) 1186, 1395, 1501
BpmI CTGGAG 1 cut(s) 66
Bpu10I CCTNAGC 3 cut(s) 1457, 1824, 1938
BpuEI CTTGAG 2 cut(s) 1097, 1445
BpuMI CCSGG 3 cut(s) 95, 164, 346
Bsa29I ATCGAT 2 cut(s) 1138, 2397
BsaBI GATNNNNATC 2 cut(s) 1071, 1653
BsaHI GRCGYC 2 cut(s) 1988, 2423
BsaI GGTCTC 2 cut(s) 1276, 1421
BsaJI CCNNGG 9 cut(s) 94, 163, 345, 575, 815, 900, 915, 954, 1604
BsaWI WCCGGW 5 cut(s) 202, 302, 384, 484, 540
BsaXI ACNNNNNCTCC 4 cut(s) 249, 279, 431, 461
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 182, 364, 588, 613, 1482, 1747
Bse118I RCCGGY 2 cut(s) 667, 709
Bse1I ACTGG 6 cut(s) 49, 620, 1205, 1769, 2244, 2475
Bse3DI GCAATG 2 cut(s) 889, 2226
Bse8I GATNNNNATC 2 cut(s) 1071, 1653
BseAI TCCGGA 2 cut(s) 202, 384
BseBI CCWGG 2 cut(s) 816, 1701
BseCI ATCGAT 2 cut(s) 1138, 2397
BseDI CCNNGG 9 cut(s) 94, 163, 345, 575, 815, 900, 915, 954, 1604
BseGI GGATG 9 cut(s) 643, 649, 925, 965, 1072, 2067, 2088, 2311, 2503
BseJI GATNNNNATC 2 cut(s) 1071, 1653
BseLI CCNNNNNNNGG 7 cut(s) 70, 182, 364, 588, 613, 1482, 1747
BseMI GCAATG 2 cut(s) 889, 2226
BseMII CTCAG 7 cut(s) 876, 1815, 2012, 2103, 2106, 2172, 2313
BseNI ACTGG 6 cut(s) 49, 620, 1205, 1769, 2244, 2475
BseRI GAGGAG 3 cut(s) 625, 1060, 2132
BseSI GKGCMC 1 cut(s) 583
BseX3I CGGCCG 5 cut(s) 210, 246, 392, 428, 1305
BseXI GCAGC 4 cut(s) 744, 1327, 2305, 2506
BsgI GTGCAG 1 cut(s) 751
Bsh1236I CGCG 2 cut(s) 2129, 2295
Bsh1285I CGRYCG 5 cut(s) 213, 249, 395, 431, 1308
BshVI ATCGAT 2 cut(s) 1138, 2397
BsiEI CGRYCG 5 cut(s) 213, 249, 395, 431, 1308
BslFI GGGAC 4 cut(s) 907, 936, 984, 1988
BslI CCNNNNNNNGG 7 cut(s) 70, 182, 364, 588, 613, 1482, 1747
BsmAI GTCTC 5 cut(s) 1276, 1421, 2405, 2483, 2547
BsmFI GGGAC 4 cut(s) 907, 936, 984, 1988
Bso31I GGTCTC 2 cut(s) 1276, 1421
Bsp120I GGGCCC 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 583
Bsp13I TCCGGA 2 cut(s) 202, 384
BspACI CCGC 7 cut(s) 707, 1238, 1304, 1308, 1973, 2293, 2343
BspCNI CTCAG 7 cut(s) 875, 1816, 2013, 2102, 2107, 2173, 2314
BspDI ATCGAT 2 cut(s) 1138, 2397
BspEI TCCGGA 2 cut(s) 202, 384
BspFNI CGCG 2 cut(s) 2129, 2295
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 3 cut(s) 581, 618, 2446
BspPI GGATC 3 cut(s) 107, 566, 2040
BspQI GCTCTTC 1 cut(s) 1905
BspTI CTTAAG 1 cut(s) 929
BspTNI GGTCTC 2 cut(s) 1276, 1421
BsrBI CCGCTC 1 cut(s) 1238
BsrDI GCAATG 2 cut(s) 889, 2226
BsrFI RCCGGY 2 cut(s) 667, 709
BsrI ACTGG 6 cut(s) 49, 620, 1205, 1769, 2244, 2475
BssAI RCCGGY 2 cut(s) 667, 709
BssECI CCNNGG 9 cut(s) 94, 163, 345, 575, 815, 900, 915, 954, 1604
BssNI GRCGYC 2 cut(s) 1988, 2423
BssSI CACGAG 1 cut(s) 2388
BssT1I CCWWGG 3 cut(s) 575, 954, 1604
Bst2BI CACGAG 1 cut(s) 2388
Bst2UI CCWGG 2 cut(s) 816, 1701
Bst4CI ACNGT 4 cut(s) 746, 950, 1485, 2534
Bst6I CTCTTC 6 cut(s) 211, 256, 393, 438, 1845, 1905
BstACI GRCGYC 2 cut(s) 1988, 2423
BstAFI CTTAAG 1 cut(s) 929
BstAPI GCANNNNNTGC 1 cut(s) 738
BstC8I GCNNGC 6 cut(s) 711, 715, 880, 1917, 2385, 2472
BstDSI CCRYGG 1 cut(s) 900
BstEII GGTNACC 3 cut(s) 536, 751, 1436
BstF5I GGATG 9 cut(s) 643, 649, 925, 965, 1072, 2067, 2088, 2311, 2503
BstFNI CGCG 2 cut(s) 2129, 2295
BstH2I RGCGCY 1 cut(s) 720
BstHHI GCGC 3 cut(s) 719, 2129, 2297
BstMAI GTCTC 5 cut(s) 1276, 1421, 2405, 2483, 2547
BstMCI CGRYCG 5 cut(s) 213, 249, 395, 431, 1308
BstMWI GCNNNNNNNGC 7 cut(s) 60, 126, 677, 738, 911, 1658, 1862
BstNI CCWGG 2 cut(s) 816, 1701
BstNSI RCATGY 1 cut(s) 878
BstPI GGTNACC 3 cut(s) 536, 751, 1436
BstSCI CCNGG 5 cut(s) 93, 162, 344, 814, 1699
BstSLI GKGCMC 1 cut(s) 583
BstUI CGCG 2 cut(s) 2129, 2295
BstV1I GCAGC 4 cut(s) 744, 1327, 2305, 2506
BstV2I GAAGAC 3 cut(s) 1186, 1395, 1501
BstX2I RGATCY 1 cut(s) 2053
BstYI RGATCY 1 cut(s) 2053
BstZI CGGCCG 5 cut(s) 210, 246, 392, 428, 1305
Bsu15I ATCGAT 2 cut(s) 1138, 2397
BsuTUI ATCGAT 2 cut(s) 1138, 2397
BtgI CCRYGG 1 cut(s) 900
BtgZI GCGATG 2 cut(s) 1712, 2144
BtrI CACGTC 2 cut(s) 158, 2340
BtsCI GGATG 9 cut(s) 643, 649, 925, 965, 1072, 2067, 2088, 2311, 2503
BtsIMutI CAGTG 2 cut(s) 13, 2178
Cac8I GCNNGC 6 cut(s) 711, 715, 880, 1917, 2385, 2472
CaiI CAGNNNCTG 1 cut(s) 2321
CciI TCATGA 1 cut(s) 1213
CciNI GCGGCCGC 1 cut(s) 1305
CfoI GCGC 3 cut(s) 719, 2129, 2297
Cfr10I RCCGGY 2 cut(s) 667, 709
Cfr13I GGNCC 5 cut(s) 579, 580, 941, 1855, 2445
ClaI ATCGAT 2 cut(s) 1138, 2397
CseI GACGC 3 cut(s) 1353, 1996, 2412
CsiI ACCWGGT 1 cut(s) 1699
Csp6I GTAC 5 cut(s) 517, 704, 926, 2018, 2086
CspCI CAANNNNNGTGG 3 cut(s) 654, 689, 2636
CviAII CATG 4 cut(s) 511, 875, 1214, 1658
CviQI GTAC 5 cut(s) 517, 704, 926, 2018, 2086
DraI TTTAAA 1 cut(s) 1707
EagI CGGCCG 5 cut(s) 210, 246, 392, 428, 1305
Eam1104I CTCTTC 6 cut(s) 211, 256, 393, 438, 1845, 1905
EarI CTCTTC 6 cut(s) 211, 256, 393, 438, 1845, 1905
EciI GGCGGA 1 cut(s) 2332
EclXI CGGCCG 5 cut(s) 210, 246, 392, 428, 1305
Eco130I CCWWGG 3 cut(s) 575, 954, 1604
Eco147I AGGCCT 2 cut(s) 680, 814
Eco24I GRGCYC 1 cut(s) 583
Eco31I GGTCTC 2 cut(s) 1276, 1421
Eco47III AGCGCT 1 cut(s) 718
Eco52I CGGCCG 5 cut(s) 210, 246, 392, 428, 1305
Eco57I CTGAAG 3 cut(s) 1374, 1512, 1929
Eco91I GGTNACC 3 cut(s) 536, 751, 1436
EcoO109I RGGNCCY 1 cut(s) 579
EcoO65I GGTNACC 3 cut(s) 536, 751, 1436
EcoRI GAATTC 2 cut(s) 241, 423
EcoRII CCWGG 2 cut(s) 814, 1699
EcoT14I CCWWGG 3 cut(s) 575, 954, 1604
EcoT22I ATGCAT 1 cut(s) 649
EcoT38I GRGCYC 1 cut(s) 583
ErhI CCWWGG 3 cut(s) 575, 954, 1604
FaeI CATG 4 cut(s) 514, 878, 1217, 1661
FalI AAGNNNNNCTT 4 cut(s) 1042, 1074, 1883, 1915
FaqI GGGAC 4 cut(s) 907, 936, 984, 1988
FatI CATG 4 cut(s) 510, 874, 1213, 1657
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 8 cut(s) 733, 1239, 1305, 1308, 1316, 1974, 2319, 2520
FokI GGATG 9 cut(s) 650, 656, 932, 972, 1079, 2074, 2095, 2298, 2510
FriOI GRGCYC 1 cut(s) 583
Fsp4HI GCNGC 8 cut(s) 733, 1239, 1305, 1308, 1316, 1974, 2319, 2520
FspBI CTAG 5 cut(s) 576, 1164, 1847, 2057, 2190
GlaI GCGC 3 cut(s) 718, 2128, 2296
GluI GCNGC 8 cut(s) 733, 1239, 1305, 1308, 1316, 1974, 2319, 2520
GsuI CTGGAG 1 cut(s) 66
HaeII RGCGCY 1 cut(s) 720
HgaI GACGC 3 cut(s) 1353, 1996, 2412
HhaI GCGC 3 cut(s) 719, 2129, 2297
Hin1I GRCGYC 2 cut(s) 1988, 2423
Hin1II CATG 4 cut(s) 514, 878, 1217, 1661
Hin6I GCGC 3 cut(s) 717, 2127, 2295
HinP1I GCGC 3 cut(s) 717, 2127, 2295
HincII GTYRAC 3 cut(s) 508, 523, 1056
HindII GTYRAC 3 cut(s) 508, 523, 1056
HindIII AAGCTT 2 cut(s) 78, 1710
HphI GGTGA 7 cut(s) 530, 1054, 1448, 1559, 2146, 2573, 2612
Hpy166II GTNNAC 6 cut(s) 508, 517, 523, 1056, 1488, 2427
Hpy8I GTNNAC 6 cut(s) 508, 517, 523, 1056, 1488, 2427
Hpy99I CGWCG 3 cut(s) 32, 1113, 1116
HpyCH4III ACNGT 4 cut(s) 746, 950, 1485, 2534
HpyCH4IV ACGT 6 cut(s) 157, 199, 339, 381, 519, 2339
HpyF10VI GCNNNNNNNGC 7 cut(s) 60, 126, 677, 738, 911, 1658, 1862
HpySE526I ACGT 6 cut(s) 157, 199, 339, 381, 519, 2339
Hsp92I GRCGYC 2 cut(s) 1988, 2423
Hsp92II CATG 4 cut(s) 514, 878, 1217, 1661
HspAI GCGC 3 cut(s) 717, 2127, 2295
Kpn2I TCCGGA 2 cut(s) 202, 384
KroI GCCGGC 1 cut(s) 709
KroNI GCCGGC 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 3
LguI GCTCTTC 1 cut(s) 1905
LmnI GCTCC 1 cut(s) 832
Lsp1109I GCAGC 4 cut(s) 744, 1327, 2305, 2506
LweI GCATC 5 cut(s) 634, 1639, 1918, 2202, 2263
MabI ACCWGGT 1 cut(s) 1699
MaeI CTAG 5 cut(s) 576, 1164, 1847, 2057, 2190
MaeII ACGT 6 cut(s) 157, 199, 339, 381, 519, 2339
MaeIII GTNAC 9 cut(s) 158, 340, 536, 602, 751, 1207, 1436, 1814, 2600
MbiI CCGCTC 1 cut(s) 1238
MfeI CAATTG 1 cut(s) 2439
MflI RGATCY 1 cut(s) 2053
MhlI GDGCHC 1 cut(s) 583
MlsI TGGCCA 3 cut(s) 553, 2099, 2646
MluNI TGGCCA 3 cut(s) 553, 2099, 2646
MlyI GAGTC 8 cut(s) 215, 273, 397, 455, 854, 889, 1618, 2174
MmeI TCCRAC 1 cut(s) 854
Mox20I TGGCCA 3 cut(s) 553, 2099, 2646
Mph1103I ATGCAT 1 cut(s) 649
MroI TCCGGA 2 cut(s) 202, 384
MroNI GCCGGC 1 cut(s) 709
MroXI GAANNNNTTC 3 cut(s) 241, 423, 1392
MscI TGGCCA 3 cut(s) 553, 2099, 2646
MseI TTAA 7 cut(s) 821, 930, 996, 1503, 1533, 1706, 2201
MslI CAYNNNNRTG 2 cut(s) 156, 338
Msp20I TGGCCA 3 cut(s) 553, 2099, 2646
MspA1I CMGCKG 1 cut(s) 2318
MspCI CTTAAG 1 cut(s) 929
MspR9I CCNGG 5 cut(s) 95, 164, 346, 816, 1701
MunI CAATTG 1 cut(s) 2439
MvaI CCWGG 2 cut(s) 816, 1701
MvnI CGCG 2 cut(s) 2129, 2295
MwoI GCNNNNNNNGC 7 cut(s) 60, 126, 677, 738, 911, 1658, 1862
NaeI GCCGGC 1 cut(s) 711
NciI CCSGG 3 cut(s) 95, 164, 346
NgoMIV GCCGGC 1 cut(s) 709
NlaIII CATG 4 cut(s) 514, 878, 1217, 1661
NlaIV GGNNCC 3 cut(s) 581, 618, 2446
NmeAIII GCCGAG 6 cut(s) 274, 456, 940, 1259, 1799, 2371
NmuCI GTSAC 7 cut(s) 158, 340, 536, 602, 1436, 1814, 2600
NotI GCGGCCGC 1 cut(s) 1305
NsiI ATGCAT 1 cut(s) 649
NspI RCATGY 1 cut(s) 878
OliI CACNNNNGTG 2 cut(s) 156, 338
PagI TCATGA 1 cut(s) 1213
PceI AGGCCT 2 cut(s) 680, 814
PciSI GCTCTTC 1 cut(s) 1905
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PdiI GCCGGC 1 cut(s) 711
PdmI GAANNNNTTC 3 cut(s) 241, 423, 1392
PfeI GAWTC 9 cut(s) 58, 724, 1010, 1403, 1689, 1737, 2186, 2334, 2622
PkrI GCNGC 8 cut(s) 734, 1240, 1306, 1309, 1317, 1975, 2320, 2521
PleI GAGTC 8 cut(s) 214, 272, 396, 454, 854, 889, 1617, 2173
PpsI GAGTC 8 cut(s) 214, 272, 396, 454, 854, 889, 1617, 2173
PsiI TTATAA 1 cut(s) 2235
Psp6I CCWGG 2 cut(s) 814, 1699
PspEI GGTNACC 3 cut(s) 536, 751, 1436
PspGI CCWGG 2 cut(s) 814, 1699
PspN4I GGNNCC 3 cut(s) 581, 618, 2446
PspOMI GGGCCC 1 cut(s) 579
PspPI GGNCC 5 cut(s) 579, 580, 941, 1855, 2445
PstNI CAGNNNCTG 1 cut(s) 2321
PsuI RGATCY 1 cut(s) 2053
PvuII CAGCTG 1 cut(s) 2318
RsaI GTAC 5 cut(s) 518, 705, 927, 2019, 2087
RsaNI GTAC 5 cut(s) 517, 704, 926, 2018, 2086
RseI CAYNNNNRTG 2 cut(s) 156, 338
SalI GTCGAC 1 cut(s) 506
SapI GCTCTTC 1 cut(s) 1905
SaqAI TTAA 7 cut(s) 821, 930, 996, 1503, 1533, 1706, 2201
SatI GCNGC 8 cut(s) 733, 1239, 1305, 1308, 1316, 1974, 2319, 2520
Sau96I GGNCC 5 cut(s) 579, 580, 941, 1855, 2445
ScaI AGTACT 2 cut(s) 927, 2019
SchI GAGTC 8 cut(s) 215, 273, 397, 455, 854, 889, 1618, 2174
ScrFI CCNGG 5 cut(s) 95, 164, 346, 816, 1701
SduI GDGCHC 1 cut(s) 583
SexAI ACCWGGT 1 cut(s) 1699
SfaNI GCATC 5 cut(s) 634, 1639, 1918, 2202, 2263
SfiI GGCCNNNNNGGCC 1 cut(s) 911
SmiMI CAYNNNNRTG 2 cut(s) 156, 338
SmlI CTYRAG 3 cut(s) 929, 1076, 1424
SmoI CTYRAG 3 cut(s) 929, 1076, 1424
SseBI AGGCCT 2 cut(s) 680, 814
SsiI CCGC 7 cut(s) 707, 1238, 1304, 1308, 1973, 2293, 2343
SspMI CTAG 5 cut(s) 576, 1164, 1847, 2057, 2190
StuI AGGCCT 2 cut(s) 680, 814
StyD4I CCNGG 5 cut(s) 93, 162, 344, 814, 1699
StyI CCWWGG 3 cut(s) 575, 954, 1604
TaaI ACNGT 4 cut(s) 746, 950, 1485, 2534
TaiI ACGT 6 cut(s) 160, 202, 342, 384, 522, 2342
TatI WGTACW 3 cut(s) 925, 2017, 2085
TauI GCSGC 4 cut(s) 1241, 1307, 1310, 1976
TfiI GAWTC 9 cut(s) 58, 724, 1010, 1403, 1689, 1737, 2186, 2334, 2622
Tru1I TTAA 7 cut(s) 821, 930, 996, 1503, 1533, 1706, 2201
Tru9I TTAA 7 cut(s) 821, 930, 996, 1503, 1533, 1706, 2201
TscAI CASTG 2 cut(s) 13, 2185
TseFI GTSAC 7 cut(s) 158, 340, 536, 602, 1436, 1814, 2600
TseI GCWGC 4 cut(s) 732, 1315, 2318, 2519
Tsp45I GTSAC 7 cut(s) 158, 340, 536, 602, 1436, 1814, 2600
TspGWI ACGGA 1 cut(s) 1044
TspRI CASTG 2 cut(s) 13, 2185
Vha464I CTTAAG 1 cut(s) 929
XapI RAATTY 6 cut(s) 102, 241, 423, 1084, 1642, 1764
XceI RCATGY 1 cut(s) 878
XcmI CCANNNNNNNNNTGG 2 cut(s) 907, 2380
XmaJI CCTAGG 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 507
XmnI GAANNNNTTC 3 cut(s) 241, 423, 1392
XspI CTAG 5 cut(s) 576, 1164, 1847, 2057, 2190
ZrmI AGTACT 2 cut(s) 927, 2019
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.