Rh2BG400300

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000560
Physical Location & Seq
Reverse (-)
56841490 .. 56843756
2267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG400300.1

Sequence Viewer

Length: 2130 bp
ATGTTTCGTGACCAGAGGAGGGAACCAGTTTATGATAGTCAGGATGAGGATGCATACGATATGACAATGCCACCGGCTTTGAAGGCCTCATCGTCATCTACTTCAAAAGTACCGCCGGCCAGCGCTGTGATTCTGTGCAGCCGTTGCAACTGTGAGGTAACCCTCAATAATCTTTTGCAAATCAAGAACCAAGAGTTAGCTACTGATCGACAGGTAAGGCCTGGGTTAAAAGCTCCAACTAATTGTGAAGAAAGTAAGAAGAAAGACTCAGGAGGGAAACATGCTGGCAATGAATTGGGGACTCCCACGGCCAATATGGCCGAGGATGAAGTACTTAAGCTCTTTGGCCCTCACAGTCCCAAGGGATGTTATCAGGGACAACAAACTTCCCAAAGTGTGTTTAAGAGGATAAAGGAATCTGAAAACGCTGAAAGCGGACGACTTTCGGCGAGGAGAAGGTTGACTTTTGAGGATGATGATCTTGAGGGAAATTTTGCTGATGATTTCAATGGCCGGCGACGATCAGGTTTTGACCAAGATGATCGATTTTATGACCAAGATTATTTTGCTAGAAATAGAGGCCGAAGACCTTATAGGACATATCGGCCACCAGTTACTCATGATAATAGGTGGTATGGCCGAGCGGCCAGAGATCAGCCATTTTCCCCTTTGACAAAAACTCAAAAGAGACGTATGCAAAGGGAAGTGGCGGCCGCAAGGCAGCAAGGGTCAGAAGGGCAGGAAGTCAGACGCTCTACTGAAGCAGATAACAAAGAAGCCCCTATAATAAGAGAAGACTTTCATAAGGATTCAGGAGAACCTATGGAACTTGAGACCATCGGTGACCATTTTGAAAATGTCCTTAGCTTCCCAAAGCTACCCCATCTGCGGTTTACTGAAGGAGGGGTTAAGGTCTTCAAACATCTCAACCCTCCATTTAAGTTGGCTGAATTAGAAACAATGAGAAAGTTTCACCAGAAACATTCAGCCCTTGCAATTTATGGGCTTCCACGGAGTCAAGACTATATTCTCAATACAATAGTAGCAAATTCTGATGCCGATCATGCTCTGATTCGGCAGGGTTTCCATAGCCGATTCATTACACCTGGTTTAAAAGCTTTGTATCAAGCACATCGCAAAGGAATCCAGAAGAAGGATATAGTAGCTCAAATTCCAGTTTCAGAAGCCGACTTTCATTTCCTTAGATGTTTTCATAGAAGTCACTCGGCTGAGGAAACCTATGGCATATCGCCAGAAGAGGCCCAGCTCGCAAGGGAACTTGATGATTATTTAGAAAAGAAAGACTTTGCAACTGAAGAGCAAGCGAAAGCCGATGCCAAAGCTAAGGATATTGAACGACAGAAGGAAGTGCAACAGGCGGCTATGGATAAGACGCCAAATGGAAAAGTCCCTACCATAAGAGTACTGAGAGGACAGGATCAGCCGTTCTCAAATCAAGATCTAGGGATGATGAAAAAATATCATAGGATGTACTCAGCATTGGCCACTTATGGCCTAACTGAGGAGGAAAGCGCGATGATGAAAATGTTAGAAAAGGATATGTCTTCAGAGTCATACCTCATCACTGAGGATTCTAGCATCGGCTTAAAAATCAGTTATCAAGCAATGATGGAGAATTATAAACTGGAAGCCAATACTGATAACTTACCTATTTCTGATGCCGACCTGACTTACCTCCGCGCCTACCATAAACAACATCCAGCTGCTGAGATTTATGGATTCACGCCCGCCGAGAGCAAATTGCTAGATAATTTGTCCAAATACCTGCGGGCTCGTGCAATCGAGTGGCAAGCAGAGACAGAGAAGGCGTCCACCAAGCTGACAACTGGGGCCATTGAAGAATTGAAGAAAGAGCAAGCCAGTCTCAATCAGAAGTTGAAGGATGAAGAAATGGTAGAAGGTGTTGCCACGAACAACGGTAAGCAAGACGATTATGGAGACGAGGGTGATGAGGAAGTCGATTATGGGGAAGAAGAAGAACAAGGTGACTATGATAATGAAGCTGGAATCGACTACGACATAGGAGATGACACAGCTTTTGACATGGAAACTTTATCCCCATTTTACAAGGGCGAGGCCGCCTTTGGAAAAGGAGAAGTTGAAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

709

Amino Acids

80.55

Weight (kDa)

5.31

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000560)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21400 FvH4_1g29793 FvH4_2g35581 FvH4_4g18554 FvH4_6g21671
pyrus_communis pycom11g14070
rosa_chinensis RchiOBHm_Chr6g0263201
rosa_laevigata RLG00000001861 RLG00000002050 RLG00000018783 RLG00000022649 RLG00000030152
rosa_multiflora Rmu_co8107100.1_g000001 Rmu_sc0000805.1_g000009 Rmu_sc0001347.1_g000002 Rmu_sc0001896.1_g000004 Rmu_sc0002170.1_g000040 Rmu_sc0002413.1_g000005 Rmu_sc0002489.1_g000053 Rmu_sc0002942.1_g000015 Rmu_sc0003071.1_g000022 Rmu_sc0003623.1_g000021 Rmu_sc0004063.1_g000005 Rmu_sc0004574.1_g000014 Rmu_sc0004723.1_g000009 Rmu_sc0005177.1_g000013 Rmu_sc0005994.1_g000011 Rmu_sc0006163.1_g000006 Rmu_sc0006583.1_g000008 Rmu_sc0008303.1_g000005 Rmu_sc0009027.1_g000002 Rmu_sc0009027.1_g000003 Rmu_sc0011790.1_g000009 Rmu_sc0011833.1_g000005 Rmu_sc0013493.1_g000006 Rmu_sc0016701.1_g000002 Rmu_sc0022033.1_g000001 Rmu_sc0022185.1_g000001 Rmu_sc0027245.1_g000005 Rmu_sc0030292.1_g000002 Rmu_ssc0000242.1_g000003
rosa_roxburghii Rroxscaffold_1G00015200 Rroxscaffold_1G00059290 Rroxscaffold_2G00079850 Rroxscaffold_2G00079860 Rroxscaffold_2G00107520 Rroxscaffold_2G00123420 Rroxscaffold_2G00123430 Rroxscaffold_3G00265790 Rroxscaffold_5G00335960 Rroxscaffold_5G00338270 Rroxscaffold_5G00343980 Rroxscaffold_5G00343990
rosa_samantha Rh1AG036500 Rh1DG429900 Rh2AG172600 Rh2AG610900 Rh2BG180200 Rh2BG180300 Rh2BG340600 Rh2BG400300 Rh2BG468400 Rh2BG478200 Rh2BG612500 Rh2BG612600 Rh3BG290000 Rh3BG290100 Rh3BG345200 Rh3BG345300 Rh3BG359800 Rh3CG291300 Rh4CG156300 Rh4CG264600 Rh5AG430300 Rh5BG185400 Rh6DG198700 Rh7CG199900 Rh7CG200000 Rh7CG370300 Rh7CG370600 Rh7CG395500 Rh7DG405800 Rh7DG405900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1641
Acc36I ACCTGC 1 cut(s) 1794
AccBSI CCGCTC 1 cut(s) 644
AccII CGCG 2 cut(s) 1535, 1701
AclWI GGATC 1 cut(s) 1446
AcoI YGGCCR 9 cut(s) 117, 309, 318, 511, 605, 637, 645, 711, 1503
AcsI RAATTY 3 cut(s) 490, 1048, 1170
AcuI CTGAAG 4 cut(s) 780, 918, 1335, 1551
AcyI GRCGYC 2 cut(s) 1394, 1829
AfaI GTAC 4 cut(s) 111, 333, 1425, 1493
AfeI AGCGCT 1 cut(s) 124
AfiI CCNNNNNNNGG 4 cut(s) 19, 888, 1153, 1522
AflII CTTAAG 1 cut(s) 335
AjnI CCWGG 2 cut(s) 220, 1105
AloI GAACNNNNNNTCC 2 cut(s) 1430, 1462
Alw26I GTCTC 5 cut(s) 682, 827, 1811, 1889, 1953
AlwI GGATC 1 cut(s) 1446
AlwNI CAGNNNCTG 1 cut(s) 1727
Aor51HI AGCGCT 1 cut(s) 124
ApeKI GCWGC 3 cut(s) 138, 721, 1724
ApoI RAATTY 3 cut(s) 490, 1048, 1170
ArsI GACNNNNNNTTYG 2 cut(s) 2042, 2074
Asp700I GAANNNNTTC 1 cut(s) 798
AspLEI GCGC 3 cut(s) 125, 1535, 1703
AspS9I GGNCC 3 cut(s) 347, 1261, 1851
AsuHPI GGTGA 4 cut(s) 854, 965, 1979, 2018
BalI TGGCCA 1 cut(s) 1505
BanII GRGCYC 1 cut(s) 1795
BauI CACGAG 1 cut(s) 1794
BbsI GAAGAC 4 cut(s) 592, 801, 907, 1557
BbvCI CCTCAGC 1 cut(s) 1230
BbvI GCAGC 3 cut(s) 150, 733, 1711
BccI CCATC 3 cut(s) 845, 891, 1624
BceAI ACGGC 3 cut(s) 126, 324, 1429
BciT130I CCWGG 2 cut(s) 222, 1107
BcoDI GTCTC 5 cut(s) 682, 827, 1811, 1889, 1953
BfaI CTAG 4 cut(s) 570, 1463, 1596, 1766
BfoI RGCGCY 1 cut(s) 126
BfrI CTTAAG 1 cut(s) 335
BfuAI ACCTGC 1 cut(s) 1794
BglI GCCNNNNNGGC 1 cut(s) 317
BglII AGATCT 1 cut(s) 1459
BisI GCNGC 8 cut(s) 139, 645, 711, 714, 722, 1380, 1725, 2100
BlsI GCNGC 8 cut(s) 140, 646, 712, 715, 723, 1381, 1726, 2101
BmcAI AGTACT 2 cut(s) 333, 1425
Bme1390I CCNGG 2 cut(s) 222, 1107
BmgT120I GGNCC 3 cut(s) 347, 1261, 1851
BmiI GGNNCC 2 cut(s) 24, 1852
BmrFI CCNGG 2 cut(s) 222, 1107
BmrI ACTGGG 1 cut(s) 1857
BmsI GCATC 5 cut(s) 40, 1045, 1324, 1608, 1669
BmuI ACTGGG 1 cut(s) 1857
BpiI GAAGAC 4 cut(s) 592, 801, 907, 1557
Bpu10I CCTNAGC 3 cut(s) 863, 1230, 1344
BpuEI CTTGAG 2 cut(s) 503, 851
Bsa29I ATCGAT 1 cut(s) 544
BsaBI GATNNNNATC 2 cut(s) 477, 1059
BsaHI GRCGYC 2 cut(s) 1394, 1829
BsaI GGTCTC 1 cut(s) 827
BsaJI CCNNGG 5 cut(s) 221, 306, 321, 360, 1010
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 888, 1153, 1522
Bse118I RCCGGY 3 cut(s) 73, 115, 513
Bse1I ACTGG 6 cut(s) 26, 611, 1175, 1650, 1852, 1881
Bse3DI GCAATG 2 cut(s) 295, 1632
Bse8I GATNNNNATC 2 cut(s) 477, 1059
BseBI CCWGG 2 cut(s) 222, 1107
BseCI ATCGAT 1 cut(s) 544
BseDI CCNNGG 5 cut(s) 221, 306, 321, 360, 1010
BseGI GGATG 9 cut(s) 49, 55, 331, 371, 478, 1473, 1494, 1717, 1909
BseJI GATNNNNATC 2 cut(s) 477, 1059
BseLI CCNNNNNNNGG 4 cut(s) 19, 888, 1153, 1522
BseMI GCAATG 2 cut(s) 295, 1632
BseMII CTCAG 7 cut(s) 282, 1221, 1418, 1509, 1512, 1578, 1719
BseNI ACTGG 6 cut(s) 26, 611, 1175, 1650, 1852, 1881
BseRI GAGGAG 3 cut(s) 31, 466, 1538
BseX3I CGGCCG 1 cut(s) 711
BseXI GCAGC 3 cut(s) 150, 733, 1711
BseYI CCCAGC 1 cut(s) 1263
BsgI GTGCAG 1 cut(s) 157
Bsh1236I CGCG 2 cut(s) 1535, 1701
Bsh1285I CGRYCG 1 cut(s) 714
BshVI ATCGAT 1 cut(s) 544
BsiEI CGRYCG 1 cut(s) 714
BsiSI CCGG 3 cut(s) 74, 116, 514
BslFI GGGAC 4 cut(s) 313, 342, 390, 1394
BslI CCNNNNNNNGG 4 cut(s) 19, 888, 1153, 1522
BsmAI GTCTC 5 cut(s) 682, 827, 1811, 1889, 1953
BsmBI CGTCTC 2 cut(s) 682, 1953
BsmFI GGGAC 4 cut(s) 313, 342, 390, 1394
Bso31I GGTCTC 1 cut(s) 827
Bsp1286I GDGCHC 1 cut(s) 1795
Bsp143I GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
BspCNI CTCAG 7 cut(s) 281, 1222, 1419, 1508, 1513, 1579, 1720
BspDI ATCGAT 1 cut(s) 544
BspFNI CGCG 2 cut(s) 1535, 1701
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 2 cut(s) 24, 1852
BspMI ACCTGC 1 cut(s) 1794
BspPI GGATC 1 cut(s) 1446
BspQI GCTCTTC 1 cut(s) 1311
BspTI CTTAAG 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 827
BsrBI CCGCTC 1 cut(s) 644
BsrDI GCAATG 2 cut(s) 295, 1632
BsrFI RCCGGY 3 cut(s) 73, 115, 513
BsrI ACTGG 6 cut(s) 26, 611, 1175, 1650, 1852, 1881
BssAI RCCGGY 3 cut(s) 73, 115, 513
BssECI CCNNGG 5 cut(s) 221, 306, 321, 360, 1010
BssMI GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
BssNI GRCGYC 2 cut(s) 1394, 1829
BssSI CACGAG 1 cut(s) 1794
BssT1I CCWWGG 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 1794
Bst2UI CCWGG 2 cut(s) 222, 1107
Bst4CI ACNGT 3 cut(s) 152, 356, 1940
Bst6I CTCTTC 2 cut(s) 1251, 1311
BstACI GRCGYC 2 cut(s) 1394, 1829
BstAFI CTTAAG 1 cut(s) 335
BstAPI GCANNNNNTGC 1 cut(s) 144
BstDSI CCRYGG 2 cut(s) 306, 1010
BstEII GGTNACC 2 cut(s) 157, 842
BstENI CCTNNNNNAGG 1 cut(s) 1520
BstF5I GGATG 9 cut(s) 49, 55, 331, 371, 478, 1473, 1494, 1717, 1909
BstFNI CGCG 2 cut(s) 1535, 1701
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 3 cut(s) 125, 1535, 1703
BstKTI GATC 8 cut(s) 208, 481, 524, 544, 655, 1063, 1441, 1462
BstMAI GTCTC 5 cut(s) 682, 827, 1811, 1889, 1953
BstMBI GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
BstMCI CGRYCG 1 cut(s) 714
BstMWI GCNNNNNNNGC 5 cut(s) 83, 144, 317, 1064, 1268
BstNI CCWGG 2 cut(s) 222, 1107
BstNSI RCATGY 1 cut(s) 284
BstPI GGTNACC 2 cut(s) 157, 842
BstSCI CCNGG 2 cut(s) 220, 1105
BstUI CGCG 2 cut(s) 1535, 1701
BstV1I GCAGC 3 cut(s) 150, 733, 1711
BstV2I GAAGAC 4 cut(s) 592, 801, 907, 1557
BstX2I RGATCY 1 cut(s) 1459
BstYI RGATCY 1 cut(s) 1459
BstZI CGGCCG 1 cut(s) 711
Bsu15I ATCGAT 1 cut(s) 544
BsuTUI ATCGAT 1 cut(s) 544
BtgI CCRYGG 2 cut(s) 306, 1010
BtgZI GCGATG 2 cut(s) 1118, 1550
BtsCI GGATG 9 cut(s) 49, 55, 331, 371, 478, 1473, 1494, 1717, 1909
BtsIMutI CAGTG 1 cut(s) 1584
BveI ACCTGC 1 cut(s) 1794
CaiI CAGNNNCTG 1 cut(s) 1727
CciI TCATGA 1 cut(s) 619
CciNI GCGGCCGC 1 cut(s) 711
CfoI GCGC 3 cut(s) 125, 1535, 1703
Cfr10I RCCGGY 3 cut(s) 73, 115, 513
Cfr13I GGNCC 3 cut(s) 347, 1261, 1851
ClaI ATCGAT 1 cut(s) 544
CseI GACGC 3 cut(s) 759, 1402, 1818
CsiI ACCWGGT 1 cut(s) 1105
Csp6I GTAC 4 cut(s) 110, 332, 1424, 1492
CspCI CAANNNNNGTGG 2 cut(s) 60, 95
CviAII CATG 4 cut(s) 281, 620, 1064, 2065
CviQI GTAC 4 cut(s) 110, 332, 1424, 1492
DpnI GATC 8 cut(s) 207, 480, 523, 543, 654, 1062, 1440, 1461
DpnII GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
DraI TTTAAA 1 cut(s) 1113
EaeI YGGCCR 9 cut(s) 117, 309, 318, 511, 605, 637, 645, 711, 1503
EagI CGGCCG 1 cut(s) 711
Eam1104I CTCTTC 2 cut(s) 1251, 1311
EarI CTCTTC 2 cut(s) 1251, 1311
EclXI CGGCCG 1 cut(s) 711
Eco130I CCWWGG 1 cut(s) 360
Eco147I AGGCCT 2 cut(s) 86, 220
Eco24I GRGCYC 1 cut(s) 1795
Eco31I GGTCTC 1 cut(s) 827
Eco47III AGCGCT 1 cut(s) 124
Eco52I CGGCCG 1 cut(s) 711
Eco57I CTGAAG 4 cut(s) 780, 918, 1335, 1551
Eco91I GGTNACC 2 cut(s) 157, 842
EcoNI CCTNNNNNAGG 1 cut(s) 1520
EcoO65I GGTNACC 2 cut(s) 157, 842
EcoRII CCWGG 2 cut(s) 220, 1105
EcoT14I CCWWGG 1 cut(s) 360
EcoT22I ATGCAT 1 cut(s) 55
EcoT38I GRGCYC 1 cut(s) 1795
ErhI CCWWGG 1 cut(s) 360
Esp3I CGTCTC 2 cut(s) 682, 1953
FaeI CATG 4 cut(s) 284, 623, 1067, 2068
FalI AAGNNNNNCTT 4 cut(s) 448, 480, 1289, 1321
FaqI GGGAC 4 cut(s) 313, 342, 390, 1394
FatI CATG 4 cut(s) 280, 619, 1063, 2064
FauI CCCGC 2 cut(s) 1756, 1782
Fnu4HI GCNGC 8 cut(s) 139, 645, 711, 714, 722, 1380, 1725, 2100
FokI GGATG 9 cut(s) 56, 62, 338, 378, 485, 1480, 1501, 1704, 1916
FriOI GRGCYC 1 cut(s) 1795
Fsp4HI GCNGC 8 cut(s) 139, 645, 711, 714, 722, 1380, 1725, 2100
FspBI CTAG 4 cut(s) 570, 1463, 1596, 1766
GlaI GCGC 3 cut(s) 124, 1534, 1702
GluI GCNGC 8 cut(s) 139, 645, 711, 714, 722, 1380, 1725, 2100
GsaI CCCAGC 1 cut(s) 1267
HaeII RGCGCY 1 cut(s) 126
HapII CCGG 3 cut(s) 74, 116, 514
HgaI GACGC 3 cut(s) 759, 1402, 1818
HhaI GCGC 3 cut(s) 125, 1535, 1703
Hin1I GRCGYC 2 cut(s) 1394, 1829
Hin1II CATG 4 cut(s) 284, 623, 1067, 2068
Hin6I GCGC 3 cut(s) 123, 1533, 1701
HinP1I GCGC 3 cut(s) 123, 1533, 1701
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HindIII AAGCTT 1 cut(s) 1116
HpaII CCGG 3 cut(s) 74, 116, 514
HphI GGTGA 4 cut(s) 854, 965, 1979, 2018
Hpy166II GTNNAC 3 cut(s) 462, 894, 1833
Hpy188I TCNGA 9 cut(s) 421, 733, 749, 1054, 1071, 1183, 1570, 1678, 1893
Hpy8I GTNNAC 3 cut(s) 462, 894, 1833
Hpy99I CGWCG 1 cut(s) 522
HpyCH4III ACNGT 3 cut(s) 152, 356, 1940
HpyCH4IV ACGT 1 cut(s) 691
HpyCH4V TGCA 9 cut(s) 53, 138, 147, 178, 697, 995, 1310, 1372, 1799
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 144, 317, 1064, 1268
HpySE526I ACGT 1 cut(s) 691
Hsp92I GRCGYC 2 cut(s) 1394, 1829
Hsp92II CATG 4 cut(s) 284, 623, 1067, 2068
HspAI GCGC 3 cut(s) 123, 1533, 1701
KroI GCCGGC 2 cut(s) 115, 513
KroNI GCCGGC 2 cut(s) 117, 515
Kzo9I GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
LguI GCTCTTC 1 cut(s) 1311
LmnI GCTCC 1 cut(s) 238
Lsp1109I GCAGC 3 cut(s) 150, 733, 1711
LweI GCATC 5 cut(s) 40, 1045, 1324, 1608, 1669
MabI ACCWGGT 1 cut(s) 1105
MaeI CTAG 4 cut(s) 570, 1463, 1596, 1766
MaeII ACGT 1 cut(s) 691
MaeIII GTNAC 6 cut(s) 8, 157, 613, 842, 1220, 2006
MalI GATC 8 cut(s) 207, 480, 523, 543, 654, 1062, 1440, 1461
MbiI CCGCTC 1 cut(s) 644
MboI GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
MflI RGATCY 1 cut(s) 1459
MhlI GDGCHC 1 cut(s) 1795
MlsI TGGCCA 1 cut(s) 1505
MluNI TGGCCA 1 cut(s) 1505
MlyI GAGTC 4 cut(s) 260, 295, 1024, 1580
MmeI TCCRAC 1 cut(s) 260
Mox20I TGGCCA 1 cut(s) 1505
Mph1103I ATGCAT 1 cut(s) 55
MroNI GCCGGC 2 cut(s) 115, 513
MroXI GAANNNNTTC 1 cut(s) 798
MscI TGGCCA 1 cut(s) 1505
MseI TTAA 7 cut(s) 227, 336, 402, 909, 939, 1112, 1607
Msp20I TGGCCA 1 cut(s) 1505
MspA1I CMGCKG 1 cut(s) 1724
MspCI CTTAAG 1 cut(s) 335
MspI CCGG 3 cut(s) 74, 116, 514
MspR9I CCNGG 2 cut(s) 222, 1107
MvaI CCWGG 2 cut(s) 222, 1107
MvnI CGCG 2 cut(s) 1535, 1701
MwoI GCNNNNNNNGC 5 cut(s) 83, 144, 317, 1064, 1268
NaeI GCCGGC 2 cut(s) 117, 515
NdeII GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
NgoMIV GCCGGC 2 cut(s) 115, 513
NlaIII CATG 4 cut(s) 284, 623, 1067, 2068
NlaIV GGNNCC 2 cut(s) 24, 1852
NmeAIII GCCGAG 4 cut(s) 346, 665, 1205, 1777
NmuCI GTSAC 4 cut(s) 8, 842, 1220, 2006
NotI GCGGCCGC 1 cut(s) 711
NsiI ATGCAT 1 cut(s) 55
NspI RCATGY 1 cut(s) 284
PagI TCATGA 1 cut(s) 619
PceI AGGCCT 2 cut(s) 86, 220
PciSI GCTCTTC 1 cut(s) 1311
PdiI GCCGGC 2 cut(s) 117, 515
PdmI GAANNNNTTC 1 cut(s) 798
PfeI GAWTC 9 cut(s) 130, 416, 809, 1072, 1095, 1143, 1592, 1740, 2028
PkrI GCNGC 8 cut(s) 140, 646, 712, 715, 723, 1381, 1726, 2101
PleI GAGTC 4 cut(s) 260, 295, 1023, 1579
PpsI GAGTC 4 cut(s) 260, 295, 1023, 1579
PsiI TTATAA 1 cut(s) 1641
Psp6I CCWGG 2 cut(s) 220, 1105
PspEI GGTNACC 2 cut(s) 157, 842
PspFI CCCAGC 1 cut(s) 1263
PspGI CCWGG 2 cut(s) 220, 1105
PspN4I GGNNCC 2 cut(s) 24, 1852
PspPI GGNCC 3 cut(s) 347, 1261, 1851
PstNI CAGNNNCTG 1 cut(s) 1727
PsuI RGATCY 1 cut(s) 1459
PvuII CAGCTG 1 cut(s) 1724
RsaI GTAC 4 cut(s) 111, 333, 1425, 1493
RsaNI GTAC 4 cut(s) 110, 332, 1424, 1492
SapI GCTCTTC 1 cut(s) 1311
SaqAI TTAA 7 cut(s) 227, 336, 402, 909, 939, 1112, 1607
SatI GCNGC 8 cut(s) 139, 645, 711, 714, 722, 1380, 1725, 2100
Sau3AI GATC 8 cut(s) 205, 478, 521, 541, 652, 1060, 1438, 1459
Sau96I GGNCC 3 cut(s) 347, 1261, 1851
ScaI AGTACT 2 cut(s) 333, 1425
SchI GAGTC 4 cut(s) 260, 295, 1024, 1580
ScrFI CCNGG 2 cut(s) 222, 1107
SduI GDGCHC 1 cut(s) 1795
SexAI ACCWGGT 1 cut(s) 1105
SfaNI GCATC 5 cut(s) 40, 1045, 1324, 1608, 1669
SfiI GGCCNNNNNGGCC 1 cut(s) 317
SmlI CTYRAG 3 cut(s) 335, 482, 830
SmoI CTYRAG 3 cut(s) 335, 482, 830
SseBI AGGCCT 2 cut(s) 86, 220
SspMI CTAG 4 cut(s) 570, 1463, 1596, 1766
StuI AGGCCT 2 cut(s) 86, 220
StyD4I CCNGG 2 cut(s) 220, 1105
StyI CCWWGG 1 cut(s) 360
TaaI ACNGT 3 cut(s) 152, 356, 1940
TaiI ACGT 1 cut(s) 694
TaqI TCGA 5 cut(s) 208, 544, 1803, 1980, 2031
TatI WGTACW 3 cut(s) 331, 1423, 1491
TauI GCSGC 5 cut(s) 647, 713, 716, 1382, 2102
TfiI GAWTC 9 cut(s) 130, 416, 809, 1072, 1095, 1143, 1592, 1740, 2028
Tru1I TTAA 7 cut(s) 227, 336, 402, 909, 939, 1112, 1607
Tru9I TTAA 7 cut(s) 227, 336, 402, 909, 939, 1112, 1607
TscAI CASTG 1 cut(s) 1591
TseFI GTSAC 4 cut(s) 8, 842, 1220, 2006
TseI GCWGC 3 cut(s) 138, 721, 1724
Tsp45I GTSAC 4 cut(s) 8, 842, 1220, 2006
TspGWI ACGGA 1 cut(s) 1027
TspRI CASTG 1 cut(s) 1591
Vha464I CTTAAG 1 cut(s) 335
XagI CCTNNNNNAGG 1 cut(s) 1520
XapI RAATTY 3 cut(s) 490, 1048, 1170
XceI RCATGY 1 cut(s) 284
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XmnI GAANNNNTTC 1 cut(s) 798
XspI CTAG 4 cut(s) 570, 1463, 1596, 1766
ZrmI AGTACT 2 cut(s) 333, 1425
Zsp2I ATGCAT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.