Rh1DG429900

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000560
Physical Location & Seq
Reverse (-)
64267192 .. 64269892
2701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG429900.1

Sequence Viewer

Length: 2547 bp
ATGCTTGAAGGAGTTTTGAAACTCCAGAGGCCAGAGCAGGTTGATAAAACTTCTAATTCGGCCCAGAAAGCTGAGAGTGCACCAACAGGAGCCAGAATAGGGAATACACCCGAAAAGGTACATTCCAGAGTACAACCTCGGGGTAAAGTAATTATCTCGGCCGAAGTGGGTAAGGCCGAGGTGGACAAACAGAGATTCAGGTCTCAAGTTACCACAAAGCGACCATTGACCCCAGATGCATCGGACAAGTACGGTCCGCACAGTCCAAGGGGAAGTCCGAAGGGTGTGTTTCATCGTCTTGATAAACCGGACGGAAGATTCTCAGAAAGGGAGCCAGTTAGGCGGCGCCTAAACTTTGATCGGCCATTTTATGATGAAGAATATTACGGCCGAAATGAGAGAGACAAAAAGAGATATCATAGGGACGAGGGTTGTAGCCGTGATAGCTATGACCGTGATGGAAACCCCCGGCCGCTAAGGACTTTCAAGCCTCCTTTGGTTTCTGACAACCGTTGGCACGGCCGTGTTTCAAGGGACCAGCCGATTGCCCCCATGACGAAAACACAATTGAGAAGACAGCAAAGACAGGTAGCCGAGGCTAAGAAAGCCCGACTGAGCGAGACAACCAGAACTTCACCTCCGCGACCCATTAAAAGGTCTGGATACGAAACGGCACCGAGAAGGTTTAGAACATACTTGAAAAAGAGCACTGATCCTCCTGTGGATAAATCAACTCGGGATACTGAAGACATGCAAATTGACTCAAGCAGGAAAGGGGTATTGAAGGTTCACTTTAAAGAGGCCCCTCGCCCAAAACCGTTGGTTGTAGTGGATAGGAATCGAGATCCACCCTTTACGGAGGAAGGGCTCGTAACTATGCGAAATTATCATCTTTTACATTCGGCCATTGATTGGTATGGTTTGACTAAGGAGGAAAGCAAGCTTTTGAATGAGGTGCGTAGGGATCGCAACAGATGTGAAGAACTTTGGGCACCTAATGTGAGAAGAGGCGTGAGAGCCAAATATCAAGCTTATTTGGAAGATCAGGAAATAAAGGCTGATTATAATTCTCTTCCCATTTCAAAAGGCGACCTACAGTATTTGAGGGAATTCTTTAGTATACACTCGGCCGAAGAATTATTCGGCCTAACGATTGAGGAACAGAGACTTGCGTTCATATTTGAGGAACGCATGGAGAAGATGGATAGAGAAAGAGGGGAAATTCTTCACGCCCTGAGTTCACCCAAGTCTTCATCAGATACACCGACATCGGGTGAGGAGGAAGAAGAAATTTTTGGGTCAAATGGCGATGAAGAGCCTTTCGTAAAGCTTTACAAGGACCTGAACCCGCCCTTTTCAGTTAAGGGACTTAAGAGAATGAAGGAGTATCATCGAAAGAATTCTGCTCTTGCATTGTACGGACCAACAAATAAGGAAATGGACACATTACATATGATTGCTGAATGCCCAAAGTCAGCAACCCTTTTGCTGGACTTGGATTCTAGCCTTGGTTTAAAGGTTGCTTACCAGGCTGTCCAAGAAGGCATAGAGCTTAAAGTTGGTAATGAGAAGATTCCAATCTCAGATAGAGACCTGAAGTATTTGAAGAGGTTCCATAAGATCCAATCTGCGGTCGAGATATATGGGATGACTACTCAGGAAAGAGAGCTGATGAAACATTTCGACCACCATGTCCGCGAAGAAGAAAATCGTCAACAAGCTCAAGCAAACCACGATTTGGCCAAATGGTTAGAAGACACTGACACAGATGATAAACAAGACCAGCATTTAGATGCCTTGGATTTTGAAGTCGATGACCAGGGTGACAAGGGCATATTGGAGGATGATGAAGGCTTATTGGATGAGGATATGGGGGATTATGATGACATAGGGGAATATGAGGAACATGTTGACTACGATGATGCCGATCAGGTTCCTGACGTCCCAGCCTCCAATCCACAGGTTGGCAACACCATCAACACTTTGACCGAGACGAGTGTACAAGCTTCGGCCAGGGAGGTCGAGGGAGCTACTATCCCAATATCTCAGGACATCGGTGACTTTAGGGTGAATATGATTAGCGTTCGGTCAGCAACTAAGATTGATTTCGACCTGGTGCAGAAAGAGAGAGATTTGGCTGGTGTATGTTTTTCTCGGCCGAGTGAATCCATGATCCAAGTCAGAGATCCCATCCTCATTGATGCTTGTATAGGTGGATGCCAATTTTCGAGGGTTTTAGTGGATGGCGGATCAGCTGTCAACATCCTTCCTTGCTCCGTTATACATCAAATCCACCCTGCCAGGTATGGCTTTGTTCCAACTGATATTTCTGTTTACGACTATACAGGGGAAGAGGCTGAAGTCAGAGGGGCGTTGCCATTGACATCGAGGTCGTACGGTCCGCTCAGACCGCAGATAAAGGAGAAACAGCCATCGATATGGTGTATGTGCTTCCATCTGAGTTTCAAGCTCAGCCGGGACAACAGAATGGAATGGAAGGGGATGTGCGAGAAGAAGTTGAATGCCAAGCTCCAGCACAGGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

848

Amino Acids

97.32

Weight (kDa)

6.16

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000560)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21400 FvH4_1g29793 FvH4_2g35581 FvH4_4g18554 FvH4_6g21671
pyrus_communis pycom11g14070
rosa_chinensis RchiOBHm_Chr6g0263201
rosa_laevigata RLG00000001861 RLG00000002050 RLG00000018783 RLG00000022649 RLG00000030152
rosa_multiflora Rmu_co8107100.1_g000001 Rmu_sc0000805.1_g000009 Rmu_sc0001347.1_g000002 Rmu_sc0001896.1_g000004 Rmu_sc0002170.1_g000040 Rmu_sc0002413.1_g000005 Rmu_sc0002489.1_g000053 Rmu_sc0002942.1_g000015 Rmu_sc0003071.1_g000022 Rmu_sc0003623.1_g000021 Rmu_sc0004063.1_g000005 Rmu_sc0004574.1_g000014 Rmu_sc0004723.1_g000009 Rmu_sc0005177.1_g000013 Rmu_sc0005994.1_g000011 Rmu_sc0006163.1_g000006 Rmu_sc0006583.1_g000008 Rmu_sc0008303.1_g000005 Rmu_sc0009027.1_g000002 Rmu_sc0009027.1_g000003 Rmu_sc0011790.1_g000009 Rmu_sc0011833.1_g000005 Rmu_sc0013493.1_g000006 Rmu_sc0016701.1_g000002 Rmu_sc0022033.1_g000001 Rmu_sc0022185.1_g000001 Rmu_sc0027245.1_g000005 Rmu_sc0030292.1_g000002 Rmu_ssc0000242.1_g000003
rosa_roxburghii Rroxscaffold_1G00015200 Rroxscaffold_1G00059290 Rroxscaffold_2G00079850 Rroxscaffold_2G00079860 Rroxscaffold_2G00107520 Rroxscaffold_2G00123420 Rroxscaffold_2G00123430 Rroxscaffold_3G00265790 Rroxscaffold_5G00335960 Rroxscaffold_5G00338270 Rroxscaffold_5G00343980 Rroxscaffold_5G00343990
rosa_samantha Rh1AG036500 Rh1DG429900 Rh2AG172600 Rh2AG610900 Rh2BG180200 Rh2BG180300 Rh2BG340600 Rh2BG400300 Rh2BG468400 Rh2BG478200 Rh2BG612500 Rh2BG612600 Rh3BG290000 Rh3BG290100 Rh3BG345200 Rh3BG345300 Rh3BG359800 Rh3CG291300 Rh4CG156300 Rh4CG264600 Rh5AG430300 Rh5BG185400 Rh6DG198700 Rh7CG199900 Rh7CG200000 Rh7CG370300 Rh7CG370600 Rh7CG395500 Rh7DG405800 Rh7DG405900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1065
AasI GACNNNNNNGTC 2 cut(s) 1691, 2389
AatII GACGTC 1 cut(s) 1944
Acc36I ACCTGC 1 cut(s) 28
AccB1I GGYRCC 3 cut(s) 345, 673, 991
AccB7I CCANNNNNTGG 3 cut(s) 912, 1738, 1964
AccBSI CCGCTC 1 cut(s) 2404
AccI GTMKAC 1 cut(s) 1120
AccII CGCG 2 cut(s) 643, 1698
AclWI GGATC 7 cut(s) 707, 839, 972, 1615, 2167, 2180, 2257
AcsI RAATTY 4 cut(s) 1109, 1221, 1290, 1399
AcuI CTGAAG 3 cut(s) 765, 1616, 2379
AcyI GRCGYC 2 cut(s) 346, 1941
AfaI GTAC 6 cut(s) 120, 132, 251, 1418, 2001, 2396
AfiI CCNNNNNNNGG 8 cut(s) 99, 654, 912, 1271, 1489, 1630, 1738, 1964
AflII CTTAAG 1 cut(s) 1370
AflIII ACRYGT 1 cut(s) 1906
AjnI CCWGG 5 cut(s) 1527, 1818, 2012, 2112, 2300
AjuI GAANNNNNNNTTGG 4 cut(s) 1278, 1310, 2311, 2343
AleI CACNNNNGTG 1 cut(s) 522
AloI GAACNNNNNNTCC 2 cut(s) 622, 654
Alw21I GWGCWC 2 cut(s) 82, 710
Alw26I GTCTC 6 cut(s) 207, 396, 614, 1159, 1584, 1985
Alw44I GTGCAC 1 cut(s) 78
AlwI GGATC 7 cut(s) 707, 839, 972, 1615, 2167, 2180, 2257
Ama87I CYCGRG 2 cut(s) 138, 735
ApaLI GTGCAC 1 cut(s) 78
ApoI RAATTY 4 cut(s) 1109, 1221, 1290, 1399
Asp700I GAANNNNTTC 4 cut(s) 1224, 1399, 1610, 1679
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 7 cut(s) 61, 254, 535, 802, 1339, 1421, 2399
AsuC2I CCSGG 2 cut(s) 469, 2477
AsuHPI GGTGA 6 cut(s) 627, 1233, 1286, 1835, 2069, 2080
AvaI CYCGRG 2 cut(s) 138, 735
AvaII GGWCC 5 cut(s) 254, 535, 1339, 1421, 2399
BaeGI GKGCMC 2 cut(s) 82, 994
BalI TGGCCA 1 cut(s) 1742
BanI GGYRCC 3 cut(s) 345, 673, 991
BanII GRGCYC 1 cut(s) 870
BbsI GAAGAC 4 cut(s) 580, 753, 1242, 1761
Bbv12I GWGCWC 2 cut(s) 82, 710
BccI CCATC 7 cut(s) 452, 1195, 1982, 2198, 2237, 2440, 2463
BceAI ACGGC 5 cut(s) 403, 423, 507, 535, 687
BciT130I CCWGG 5 cut(s) 1529, 1820, 2014, 2114, 2302
BciVI GTATCC 2 cut(s) 656, 733
BcnI CCSGG 2 cut(s) 469, 2477
BcoDI GTCTC 6 cut(s) 207, 396, 614, 1159, 1584, 1985
BfaI CTAG 1 cut(s) 1503
BfmI CTRYAG 1 cut(s) 1094
BfoI RGCGCY 1 cut(s) 349
BfrI CTTAAG 1 cut(s) 1370
BfuAI ACCTGC 1 cut(s) 28
BfuI GTATCC 2 cut(s) 656, 733
BglI GCCNNNNNGGC 1 cut(s) 340
BisI GCNGC 2 cut(s) 344, 473
BlpI GCTNAGC 1 cut(s) 2471
BlsI GCNGC 2 cut(s) 345, 474
Bme1390I CCNGG 7 cut(s) 469, 1529, 1820, 2014, 2114, 2302, 2477
Bme18I GGWCC 5 cut(s) 254, 535, 1339, 1421, 2399
BmeT110I CYCGRG 2 cut(s) 138, 735
BmgT120I GGNCC 7 cut(s) 61, 254, 535, 802, 1339, 1421, 2399
BmiI GGNNCC 9 cut(s) 91, 333, 347, 536, 675, 804, 993, 1613, 1935
BmrFI CCNGG 7 cut(s) 469, 1529, 1820, 2014, 2114, 2302, 2477
BmsI GCATC 6 cut(s) 226, 248, 1783, 1912, 2191, 2207
BpiI GAAGAC 4 cut(s) 580, 753, 1242, 1761
BpmI CTGGAG 2 cut(s) 8, 2516
Bpu10I CCTNAGC 1 cut(s) 476
Bpu1102I GCTNAGC 1 cut(s) 2471
BpuEI CTTGAG 3 cut(s) 189, 748, 1707
BpuMI CCSGG 2 cut(s) 469, 2477
Bsa29I ATCGAT 1 cut(s) 2435
BsaBI GATNNNNATC 3 cut(s) 837, 1577, 1926
BsaHI GRCGYC 2 cut(s) 346, 1941
BsaI GGTCTC 2 cut(s) 207, 1584
BsaJI CCNNGG 9 cut(s) 137, 177, 266, 467, 594, 1507, 1797, 1819, 2013
BsaWI WCCGGW 1 cut(s) 307
BsaXI ACNNNNNCTCC 4 cut(s) 622, 652, 700, 730
Bsc4I CCNNNNNNNGG 8 cut(s) 99, 654, 912, 1271, 1489, 1630, 1738, 1964
Bse1I ACTGG 1 cut(s) 335
Bse8I GATNNNNATC 3 cut(s) 837, 1577, 1926
BseBI CCWGG 5 cut(s) 1529, 1820, 2014, 2114, 2302
BseCI ATCGAT 1 cut(s) 2435
BseDI CCNNGG 9 cut(s) 137, 177, 266, 467, 594, 1507, 1797, 1819, 2013
BseGI GGATG 8 cut(s) 1653, 1849, 1867, 2190, 2222, 2248, 2262, 2508
BseJI GATNNNNATC 3 cut(s) 837, 1577, 1926
BseLI CCNNNNNNNGG 8 cut(s) 99, 654, 912, 1271, 1489, 1630, 1738, 1964
BseNI ACTGG 1 cut(s) 335
BseRI GAGGAG 1 cut(s) 1292
BseSI GKGCMC 2 cut(s) 82, 994
BseX3I CGGCCG 6 cut(s) 159, 388, 470, 520, 1128, 2156
BseYI CCCAGC 1 cut(s) 1945
BsgI GTGCAG 1 cut(s) 2138
Bsh1236I CGCG 2 cut(s) 643, 1698
Bsh1285I CGRYCG 7 cut(s) 162, 391, 473, 523, 1131, 1635, 2159
BshNI GGYRCC 3 cut(s) 345, 673, 991
BshVI ATCGAT 1 cut(s) 2435
BsiEI CGRYCG 7 cut(s) 162, 391, 473, 523, 1131, 1635, 2159
BsiHKAI GWGCWC 2 cut(s) 82, 710
BsiHKCI CYCGRG 2 cut(s) 138, 735
BsiSI CCGG 3 cut(s) 308, 469, 2476
BsiWI CGTACG 1 cut(s) 2394
BslFI GGGAC 5 cut(s) 437, 548, 1380, 1928, 2492
BslI CCNNNNNNNGG 8 cut(s) 99, 654, 912, 1271, 1489, 1630, 1738, 1964
BsmAI GTCTC 6 cut(s) 207, 396, 614, 1159, 1584, 1985
BsmBI CGTCTC 1 cut(s) 1985
BsmFI GGGAC 5 cut(s) 437, 548, 1380, 1928, 2492
BsmI GAATGC 2 cut(s) 1469, 2527
Bso31I GGTCTC 2 cut(s) 207, 1584
BsoBI CYCGRG 2 cut(s) 138, 735
Bsp1286I GDGCHC 4 cut(s) 82, 710, 870, 994
Bsp1407I TGTACA 1 cut(s) 1999
Bsp1720I GCTNAGC 1 cut(s) 2471
BspDI ATCGAT 1 cut(s) 2435
BspFNI CGCG 2 cut(s) 643, 1698
BspLI GGNNCC 9 cut(s) 91, 333, 347, 536, 675, 804, 993, 1613, 1935
BspMI ACCTGC 1 cut(s) 28
BspPI GGATC 7 cut(s) 707, 839, 972, 1615, 2167, 2180, 2257
BspQI GCTCTTC 1 cut(s) 1308
BspT107I GGYRCC 3 cut(s) 345, 673, 991
BspTI CTTAAG 1 cut(s) 1370
BspTNI GGTCTC 2 cut(s) 207, 1584
BsrBI CCGCTC 1 cut(s) 2404
BsrGI TGTACA 1 cut(s) 1999
BsrI ACTGG 1 cut(s) 335
BssECI CCNNGG 9 cut(s) 137, 177, 266, 467, 594, 1507, 1797, 1819, 2013
BssNAI GTATAC 1 cut(s) 1121
BssNI GRCGYC 2 cut(s) 346, 1941
BssT1I CCWWGG 3 cut(s) 266, 1507, 1797
Bst1107I GTATAC 1 cut(s) 1121
Bst2UI CCWGG 5 cut(s) 1529, 1820, 2014, 2114, 2302
Bst4CI ACNGT 7 cut(s) 254, 263, 455, 512, 819, 1098, 2399
Bst6I CTCTTC 5 cut(s) 1000, 1077, 1308, 1601, 2346
BstACI GRCGYC 2 cut(s) 346, 1941
BstAFI CTTAAG 1 cut(s) 1370
BstAUI TGTACA 1 cut(s) 1999
BstC8I GCNNGC 1 cut(s) 941
BstF5I GGATG 8 cut(s) 1653, 1849, 1867, 2190, 2222, 2248, 2262, 2508
BstFNI CGCG 2 cut(s) 643, 1698
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 1 cut(s) 348
BstMAI GTCTC 6 cut(s) 207, 396, 614, 1159, 1584, 1985
BstMCI CGRYCG 7 cut(s) 162, 391, 473, 523, 1131, 1635, 2159
BstMWI GCNNNNNNNGC 7 cut(s) 68, 77, 340, 444, 605, 1529, 2410
BstNI CCWGG 5 cut(s) 1529, 1820, 2014, 2114, 2302
BstNSI RCATGY 2 cut(s) 754, 1910
BstSCI CCNGG 7 cut(s) 467, 1527, 1818, 2012, 2112, 2300, 2475
BstSFI CTRYAG 1 cut(s) 1094
BstSLI GKGCMC 2 cut(s) 82, 994
BstUI CGCG 2 cut(s) 643, 1698
BstV2I GAAGAC 4 cut(s) 580, 753, 1242, 1761
BstX2I RGATCY 3 cut(s) 844, 1620, 2185
BstXI CCANNNNNNTGG 1 cut(s) 2439
BstYI RGATCY 3 cut(s) 844, 1620, 2185
BstZ17I GTATAC 1 cut(s) 1121
BstZI CGGCCG 6 cut(s) 159, 388, 470, 520, 1128, 2156
Bsu15I ATCGAT 1 cut(s) 2435
BsuI GTATCC 2 cut(s) 656, 733
BsuTUI ATCGAT 1 cut(s) 2435
BtgZI GCGATG 1 cut(s) 1323
BtsCI GGATG 8 cut(s) 1653, 1849, 1867, 2190, 2222, 2248, 2262, 2508
BtsIMutI CAGTG 2 cut(s) 708, 1758
BveI ACCTGC 1 cut(s) 28
Cac8I GCNNGC 1 cut(s) 941
CfoI GCGC 1 cut(s) 348
Cfr13I GGNCC 7 cut(s) 61, 254, 535, 802, 1339, 1421, 2399
ClaI ATCGAT 1 cut(s) 2435
CpoI CGGWCCG 2 cut(s) 254, 2399
CsiI ACCWGGT 1 cut(s) 2112
Csp6I GTAC 6 cut(s) 119, 131, 250, 1417, 2000, 2395
CspI CGGWCCG 2 cut(s) 254, 2399
CviAII CATG 6 cut(s) 553, 751, 1192, 1691, 1907, 2170
CviQI GTAC 6 cut(s) 119, 131, 250, 1417, 2000, 2395
DinI GGCGCC 1 cut(s) 347
DraI TTTAAA 2 cut(s) 796, 1515
DrdI GACNNNNNNGTC 2 cut(s) 1691, 2389
DseDI GACNNNNNNGTC 2 cut(s) 1691, 2389
EagI CGGCCG 6 cut(s) 159, 388, 470, 520, 1128, 2156
Eam1104I CTCTTC 5 cut(s) 1000, 1077, 1308, 1601, 2346
EarI CTCTTC 5 cut(s) 1000, 1077, 1308, 1601, 2346
EciI GGCGGA 1 cut(s) 2262
EclXI CGGCCG 6 cut(s) 159, 388, 470, 520, 1128, 2156
Eco130I CCWWGG 3 cut(s) 266, 1507, 1797
Eco24I GRGCYC 1 cut(s) 870
Eco31I GGTCTC 2 cut(s) 207, 1584
Eco32I GATATC 1 cut(s) 416
Eco47I GGWCC 5 cut(s) 254, 535, 1339, 1421, 2399
Eco52I CGGCCG 6 cut(s) 159, 388, 470, 520, 1128, 2156
Eco57I CTGAAG 3 cut(s) 765, 1616, 2379
Eco88I CYCGRG 2 cut(s) 138, 735
EcoO109I RGGNCCY 2 cut(s) 802, 1339
EcoRI GAATTC 2 cut(s) 1109, 1399
EcoRII CCWGG 5 cut(s) 1527, 1818, 2012, 2112, 2300
EcoRV GATATC 1 cut(s) 416
EcoT14I CCWWGG 3 cut(s) 266, 1507, 1797
EcoT22I ATGCAT 1 cut(s) 241
EcoT38I GRGCYC 1 cut(s) 870
EgeI GGCGCC 1 cut(s) 347
EheI GGCGCC 1 cut(s) 347
ErhI CCWWGG 3 cut(s) 266, 1507, 1797
Esp3I CGTCTC 1 cut(s) 1985
FaeI CATG 6 cut(s) 556, 754, 1195, 1694, 1910, 2173
FalI AAGNNNNNCTT 2 cut(s) 776, 808
FaqI GGGAC 5 cut(s) 437, 548, 1380, 1928, 2492
FatI CATG 6 cut(s) 552, 750, 1191, 1690, 1906, 2169
FauI CCCGC 1 cut(s) 1356
FauNDI CATATG 1 cut(s) 1452
FblI GTMKAC 1 cut(s) 1120
Fnu4HI GCNGC 2 cut(s) 344, 473
FokI GGATG 8 cut(s) 1660, 1856, 1874, 2177, 2229, 2249, 2255, 2515
FriOI GRGCYC 1 cut(s) 870
Fsp4HI GCNGC 2 cut(s) 344, 473
FspBI CTAG 1 cut(s) 1503
GlaI GCGC 1 cut(s) 347
GluI GCNGC 2 cut(s) 344, 473
GsaI CCCAGC 1 cut(s) 1949
GsuI CTGGAG 2 cut(s) 8, 2516
HaeII RGCGCY 1 cut(s) 349
HapII CCGG 3 cut(s) 308, 469, 2476
HhaI GCGC 1 cut(s) 348
Hin1I GRCGYC 2 cut(s) 346, 1941
Hin1II CATG 6 cut(s) 556, 754, 1195, 1694, 1910, 2173
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HincII GTYRAC 3 cut(s) 1715, 1912, 2260
HindII GTYRAC 3 cut(s) 1715, 1912, 2260
HindIII AAGCTT 4 cut(s) 941, 1029, 1328, 2004
HinfI GANTC 7 cut(s) 195, 318, 761, 838, 1499, 1573, 2165
HpaII CCGG 3 cut(s) 308, 469, 2476
HphI GGTGA 6 cut(s) 627, 1233, 1286, 1835, 2069, 2080
HpyAV CCTTC 9 cut(s) 274, 675, 778, 857, 1375, 1535, 1844, 2276, 2491
HpyCH4III ACNGT 7 cut(s) 254, 263, 455, 512, 819, 1098, 2399
HpyCH4IV ACGT 1 cut(s) 1941
HpyCH4V TGCA 5 cut(s) 80, 239, 754, 1412, 2119
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 77, 340, 444, 605, 1529, 2410
HpySE526I ACGT 1 cut(s) 1941
Hsp92I GRCGYC 2 cut(s) 346, 1941
Hsp92II CATG 6 cut(s) 556, 754, 1195, 1694, 1910, 2173
HspAI GCGC 1 cut(s) 346
KasI GGCGCC 1 cut(s) 345
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 5 cut(s) 89, 331, 2027, 2279, 2535
LweI GCATC 6 cut(s) 226, 248, 1783, 1912, 2191, 2207
MabI ACCWGGT 1 cut(s) 2112
MaeI CTAG 1 cut(s) 1503
MaeII ACGT 1 cut(s) 1941
MaeIII GTNAC 4 cut(s) 208, 871, 1823, 2057
MbiI CCGCTC 1 cut(s) 2404
MfeI CAATTG 1 cut(s) 566
MflI RGATCY 3 cut(s) 844, 1620, 2185
MhlI GDGCHC 4 cut(s) 82, 710, 870, 994
MlsI TGGCCA 1 cut(s) 1742
MluNI TGGCCA 1 cut(s) 1742
Mly113I GGCGCC 1 cut(s) 346
MlyI GAGTC 1 cut(s) 755
MmeI TCCRAC 1 cut(s) 2342
Mox20I TGGCCA 1 cut(s) 1742
Mph1103I ATGCAT 1 cut(s) 241
MroXI GAANNNNTTC 4 cut(s) 1224, 1399, 1610, 1679
MscI TGGCCA 1 cut(s) 1742
MseI TTAA 6 cut(s) 651, 795, 1362, 1371, 1514, 1554
MslI CAYNNNNRTG 3 cut(s) 522, 1791, 2437
Msp20I TGGCCA 1 cut(s) 1742
MspA1I CMGCKG 1 cut(s) 2255
MspCI CTTAAG 1 cut(s) 1370
MspI CCGG 3 cut(s) 308, 469, 2476
MspR9I CCNGG 7 cut(s) 469, 1529, 1820, 2014, 2114, 2302, 2477
MunI CAATTG 1 cut(s) 566
Mva1269I GAATGC 2 cut(s) 1469, 2527
MvaI CCWGG 5 cut(s) 1529, 1820, 2014, 2114, 2302
MvnI CGCG 2 cut(s) 643, 1698
MwoI GCNNNNNNNGC 7 cut(s) 68, 77, 340, 444, 605, 1529, 2410
NarI GGCGCC 1 cut(s) 346
NciI CCSGG 2 cut(s) 469, 2477
NdeI CATATG 1 cut(s) 1452
NlaIII CATG 6 cut(s) 556, 754, 1195, 1694, 1910, 2173
NlaIV GGNNCC 9 cut(s) 91, 333, 347, 536, 675, 804, 993, 1613, 1935
NmeAIII GCCGAG 6 cut(s) 137, 202, 619, 1106, 2134, 2184
NmuCI GTSAC 2 cut(s) 1823, 2057
NsiI ATGCAT 1 cut(s) 241
NspI RCATGY 2 cut(s) 754, 1910
OliI CACNNNNGTG 1 cut(s) 522
PciI ACATGT 1 cut(s) 1906
PciSI GCTCTTC 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 1 cut(s) 1923
PctI GAATGC 2 cut(s) 1469, 2527
PdmI GAANNNNTTC 4 cut(s) 1224, 1399, 1610, 1679
PfeI GAWTC 6 cut(s) 195, 318, 838, 1499, 1573, 2165
Pfl23II CGTACG 1 cut(s) 2394
PflMI CCANNNNNTGG 3 cut(s) 912, 1738, 1964
PkrI GCNGC 2 cut(s) 345, 474
PleI GAGTC 1 cut(s) 755
PluTI GGCGCC 1 cut(s) 349
PpsI GAGTC 1 cut(s) 755
PpuMI RGGWCCY 1 cut(s) 1339
PscI ACATGT 1 cut(s) 1906
PsiI TTATAA 1 cut(s) 1065
Psp5II RGGWCCY 1 cut(s) 1339
Psp6I CCWGG 5 cut(s) 1527, 1818, 2012, 2112, 2300
PspFI CCCAGC 1 cut(s) 1945
PspGI CCWGG 5 cut(s) 1527, 1818, 2012, 2112, 2300
PspLI CGTACG 1 cut(s) 2394
PspN4I GGNNCC 9 cut(s) 91, 333, 347, 536, 675, 804, 993, 1613, 1935
PspPI GGNCC 7 cut(s) 61, 254, 535, 802, 1339, 1421, 2399
PspPPI RGGWCCY 1 cut(s) 1339
PsrI GAACNNNNNNTAC 2 cut(s) 771, 803
PsuI RGATCY 3 cut(s) 844, 1620, 2185
PvuII CAGCTG 1 cut(s) 2255
RsaI GTAC 6 cut(s) 120, 132, 251, 1418, 2001, 2396
RsaNI GTAC 6 cut(s) 119, 131, 250, 1417, 2000, 2395
RseI CAYNNNNRTG 3 cut(s) 522, 1791, 2437
Rsr2I CGGWCCG 2 cut(s) 254, 2399
RsrII CGGWCCG 2 cut(s) 254, 2399
SapI GCTCTTC 1 cut(s) 1308
SaqAI TTAA 6 cut(s) 651, 795, 1362, 1371, 1514, 1554
SatI GCNGC 2 cut(s) 344, 473
Sau96I GGNCC 7 cut(s) 61, 254, 535, 802, 1339, 1421, 2399
SchI GAGTC 1 cut(s) 755
ScrFI CCNGG 7 cut(s) 469, 1529, 1820, 2014, 2114, 2302, 2477
SduI GDGCHC 4 cut(s) 82, 710, 870, 994
SexAI ACCWGGT 1 cut(s) 2112
SfaNI GCATC 6 cut(s) 226, 248, 1783, 1912, 2191, 2207
SfcI CTRYAG 1 cut(s) 1094
SfoI GGCGCC 1 cut(s) 347
SinI GGWCC 5 cut(s) 254, 535, 1339, 1421, 2399
SmiMI CAYNNNNRTG 3 cut(s) 522, 1791, 2437
SmlI CTYRAG 4 cut(s) 204, 763, 1370, 1722
SmoI CTYRAG 4 cut(s) 204, 763, 1370, 1722
SspDI GGCGCC 1 cut(s) 345
SspI AATATT 1 cut(s) 383
SspMI CTAG 1 cut(s) 1503
StyD4I CCNGG 7 cut(s) 467, 1527, 1818, 2012, 2112, 2300, 2475
StyI CCWWGG 3 cut(s) 266, 1507, 1797
TaaI ACNGT 7 cut(s) 254, 263, 455, 512, 819, 1098, 2399
TaiI ACGT 1 cut(s) 1944
TaqII GACCGA 2 cut(s) 2003, 2076
TatI WGTACW 2 cut(s) 130, 1999
TauI GCSGC 2 cut(s) 346, 475
TfiI GAWTC 6 cut(s) 195, 318, 838, 1499, 1573, 2165
Tru1I TTAA 6 cut(s) 651, 795, 1362, 1371, 1514, 1554
Tru9I TTAA 6 cut(s) 651, 795, 1362, 1371, 1514, 1554
TscAI CASTG 2 cut(s) 715, 1765
TseFI GTSAC 2 cut(s) 1823, 2057
Tsp45I GTSAC 2 cut(s) 1823, 2057
TspDTI ATGAA 8 cut(s) 281, 390, 1165, 1242, 1326, 1394, 1688, 1863
TspGWI ACGGA 4 cut(s) 327, 872, 1434, 2266
TspRI CASTG 2 cut(s) 715, 1765
Van91I CCANNNNNTGG 3 cut(s) 912, 1738, 1964
Vha464I CTTAAG 1 cut(s) 1370
VneI GTGCAC 1 cut(s) 78
VpaK11BI GGWCC 5 cut(s) 254, 535, 1339, 1421, 2399
XapI RAATTY 4 cut(s) 1109, 1221, 1290, 1399
XceI RCATGY 2 cut(s) 754, 1910
XmiI GTMKAC 1 cut(s) 1120
XmnI GAANNNNTTC 4 cut(s) 1224, 1399, 1610, 1679
XspI CTAG 1 cut(s) 1503
ZraI GACGTC 1 cut(s) 1942
Zsp2I ATGCAT 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.