FvH4_1g22620

ABC transporter F family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000380
Physical Location & Seq
Forward (+)
14552209 .. 14557873
5665 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22620.t1

Sequence Viewer

Length: 2118 bp
ATGGAGCTCCACCGCCTCGACCTCCGCTCCACCTTCCTCGCCGGCTCCACCCCCCCCTCCTCTCTCCCGCCTCGCCTCCGCTCCCTAATCTCCGCCCAATCACCCAAACCCACCTCCCCCTCCATCAAAATCACTTCTTTATTCAAACCCTCAACACCCACTTCACATATCCGCACAAAGCTCCCGGCTTTGGCCGTCGAAACTCCGGTGGCCACGTCAGAGAACACCGACATTGAGTCTCTGTTTTCTGACAACTCCGGGAACGGGACCCACGAACGTAAACGTGGCAAGAAGAGCTCCAATTCCGGAGCTTCCGGCGTTTCTTCCGGTGTGAAGCTCGAGAATGTGACCAAGAGCTATAAGGGTGTGACTGTGTTGAAGGATGTGACGTGGGAAGTGAAGAAGGGTGAGAAGGTTGGACTGGTGGGTGTGAATGGTGCGGGGAAGACGACCCAGATGAGGATTATTGCTGGTTTGGAGGAGCCGGACTCGGGGAATGTGATAAAGGCGAAATCGAATATGAAGATTGCGTTTTTGAGTCAGGAGTTTGAGGTTTCGATGAGTAAGACGGTGAGGGAGGAGTTTATGAGTGCTTTTAAGGAGGAGATGGAGGTGGCTGAGAGGCTGGAGAGGGTGCAGAAGGCGTTGGAGAATGCTGTGGAGGATATGGACTTGATGGGGAGGCTGTTGGATGAGCTGGATAAGCTGCAGAATCGGGCGCAGGAGTGTGACTTGAGTATGGTGGATGCAAAGATTAGTAAGTTGATGCCGGAGCTTGGGTTTGCGCCCGAGGATGGGGATAGGTTGGTGGCTTCGTTTAGTAGTGGTTGGCAGATGAGGATGTCGCTTGGCAAGATTTTGCTGCAGGACCCTGATTTACTACTGCTGGATGAGCCTACAAATCACCTTGACCTTGACACAATTGAGTGGCTCGAAGATTATCTCAATCAGCAAGATGTGCCAATGGTTATCATATCTCATGACCGAGCTTTTCTCGATCAATTGTGTACAAAAATAGTGGAAACTGATATGGGTGTCTCCAGAACGTATGAGGGAAATTATTCTGAGTATTATATTGCAAAGGCAGCTTGGATTGAAAGTCAAAATGCTGCTTGGGAGAAGCAACAAAAGGAAATTGAGCACACAAAAGATTTGATACACAGGTTGGGCGCTGGAGCAAATTCTGGCCGTGCGTCTTCTGCTGGAAAGAAGCTGGAGAAACTTCAGGAAGAGGACCTAGTTGAAAGGCCGTTCCAGAGGAAACAGATGAGGATCAGGTTTCCTGAACGGGGAAGAAGTGGAAGATTTGTTGCAACACTTAAGAATCTGGAAGCTGGCTTTGGGGATAAGGTGCTGTTTAGCAGAGCAAATCTCACAATTGAAAGGGGAGAGAAGATTGCCATTATTGGCCCAAATGGATGTGGAAAGAGTACTTTGCTGAAACTAATAATGGGGTTACAAAAGCCAACAGCTGGTGAAGTTCTGCTTGGGGAGCATAATGTCCTACCAAACTATTTTGAACAAAATCAGGCTGAGGCACTGGATTTAAATAAAACAGTGCTTGAGACAGTAGAAGAAGCAGCAGAGGACTGGAGACTTGATGATATAAAGGGTCTCCTTGGTCGTTGTAATTTCAAAGCTGATATGCTTGATAGAAAAGTTTCCCTCCTAAGTGGTGGTGAGAAGGCGCGCCTTGCTTTCTGCAAGTTCATGGTAAAGCCATCTACTCTTCTAGTTCTGGATGAACCGACAAATCACTTGGATATTCCTTCGAAAGAGATGCTTGAGGAGGCAATAAATGAGTACAAGGGCACTGTTATCACAGTTTCTCATGACCGATACTTCATAAAGCAAATAGTTAACAGAGTAGTGGAAGTTAAAGACAGAAGATTGCAAGATTATGCAGGCAATTACAATTATTATCTAGAGAAGAATCTAGATGCTAGGGAAAGAGAGCTCGAGCGTGAGGCAGAGATTGAGGAAAAGGCTCCTAAAGTGAAAGCGAAATCGAAGATGTCCAAGGCTGAAAAGGAAGCTCGAAAGAAGCAAAAGATGCAGGCATTCCAGCAAGCAAAGGCAAAATCAAAAGGAACAAAGAACGCTAAAAGATGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0043207 GO:0050896 GO:0051704 GO:0051707
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_tran ABC_tran_Xtn

Protein Analysis

706

Amino Acids

79.14

Weight (kDa)

7.99

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 126 - 301 2e-24 ABC transporter
ABC_tran_Xtn PF12848 340 - 427 4.7e-19 ABC transporter
ABC_tran PF00005 455 - 585 1.8e-27 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09930
fragaria_vesca FvH4_1g22620
malus_domestica MD01G1020400.v1.1 MD01G1020500.v1.1 MD15G1331800.v1.1
prunus_persica Prupe.6G171800_v2.0.a1 Prupe.6G171800_v2.0.a1
pyrus_communis pycom15g29330
rosa_chinensis RchiOBHm_Chr1g0349811 RchiOBHm_Chr2g0116631 RchiOBHm_Chr2g0116661 RchiOBHm_Chr2g0116701 RchiOBHm_Chr2g0116721 RchiOBHm_Chr2g0116821 RchiOBHm_Chr2g0116831 RchiOBHm_Chr2g0137191 RchiOBHm_Chr4g0436571 RchiOBHm_Chr5g0033691 RchiOBHm_Chr5g0080211 RchiOBHm_Chr7g0224491
rosa_laevigata RLG00000001144 RLG00000001242 RLG00000008715 RLG00000011571 RLG00000013376 RLG00000018295 RLG00000018297 RLG00000018299 RLG00000018304 RLG00000018340 RLG00000019297
rosa_multiflora Rmu_co8219302.1_g000001 Rmu_co8228065.1_g000001 Rmu_co8391111.1_g000001 Rmu_sc0001896.1_g000033 Rmu_sc0003126.1_g000001 Rmu_sc0004191.1_g000001 Rmu_sc0004942.1_g000016 Rmu_sc0005450.1_g000015 Rmu_sc0010198.1_g000002 Rmu_sc0011574.1_g000003 Rmu_sc0020362.1_g000001 Rmu_sc0020362.1_g000002 Rmu_sc0026531.1_g000001
rosa_roxburghii Rroxscaffold_1G00010030 Rroxscaffold_1G00018300 Rroxscaffold_1G00021420 Rroxscaffold_2G00089320 Rroxscaffold_2G00126980 Rroxscaffold_2G00127000 Rroxscaffold_2G00144860 Rroxscaffold_6G00390340 Rroxscaffold_6G00390350 Rroxscaffold_6G00394730 Rroxscaffold_6G00423750
rosa_rugosa Rorug01G0049700 Rorug01G0284700 Rorug02G0208300 Rorug02G0208400 Rorug02G0208500 Rorug02G0208600 Rorug06G0216100 Rorug06G0216200 Rorug06G0216300
rosa_samantha Rh1AG026000 Rh1AG205600 Rh1AG270100 Rh1CG024200 Rh1DG146900 Rh1DG206100 Rh2AG263300 Rh2AG263500 Rh2AG263700 Rh2AG264100 Rh2AG264200 Rh2AG264800 Rh2BG275100 Rh2BG275200 Rh2BG275300 Rh2BG275500 Rh2BG278500 Rh2CG297300 Rh2CG302200 Rh2DG271500 Rh2DG271600 Rh2DG272100 Rh2DG290100 Rh2DG290200 Rh2DG290700 Rh3AG071300 Rh3CG072500 Rh5AG478400 Rh6AG079600 Rh6AG220800 Rh6BG131400 Rh6DG116900 Rh6DG391500 Rh7AG379600 Rh7CG399100 Rh7CG429600
rosa_wichuraiana Rw2G020730 Rw2G020760 Rw2G051970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1472
AccBSI CCGCTC 2 cut(s) 27, 81
AccII CGCG 1 cut(s) 1690
AccIII TCCGGA 1 cut(s) 305
AciI CCGC 7 cut(s) 13, 25, 68, 79, 93, 172, 440
AclWI GGATC 1 cut(s) 1280
AcoI YGGCCR 3 cut(s) 192, 210, 1186
AcsI RAATTY 1 cut(s) 1180
AcuI CTGAAG 1 cut(s) 1208
AfaI GTAC 3 cut(s) 1009, 1432, 1805
AfiI CCNNNNNNNGG 9 cut(s) 190, 264, 459, 491, 776, 794, 795, 1289, 1472
AflII CTTAAG 1 cut(s) 1319
AgsI TTSAA 7 cut(s) 145, 379, 1097, 1244, 1382, 1520, 1636
AhdI GACNNNNNGTC 1 cut(s) 235
AjiI CACGTC 2 cut(s) 216, 390
AjuI GAANNNNNNNTTGG 4 cut(s) 1323, 1355, 1470, 1502
Alw21I GWGCWC 4 cut(s) 9, 299, 1143, 1959
Alw26I GTCTC 5 cut(s) 243, 1042, 1559, 1588, 1619
AlwI GGATC 1 cut(s) 1280
Ama87I CYCGRG 4 cut(s) 338, 490, 788, 1958
Aor13HI TCCGGA 1 cut(s) 305
AoxI GGCC 5 cut(s) 192, 210, 1186, 1247, 1408
ApeKI GCWGC 5 cut(s) 706, 862, 1085, 1109, 1580
ApoI RAATTY 1 cut(s) 1180
AscI GGCGCGCC 1 cut(s) 1688
Asp700I GAANNNNTTC 2 cut(s) 1060, 1660
AspLEI GCGC 5 cut(s) 721, 787, 1172, 1690, 1692
AspS9I GGNCC 4 cut(s) 267, 868, 1234, 1409
AsuC2I CCSGG 2 cut(s) 185, 259
AsuHPI GGTGA 6 cut(s) 93, 419, 583, 896, 1487, 1691
AsuII TTCGAA 1 cut(s) 1772
AvaI CYCGRG 4 cut(s) 338, 490, 788, 1958
AvaII GGWCC 3 cut(s) 267, 868, 1234
BaeGI GKGCMC 1 cut(s) 1814
BaeI ACNNNNGTAYC 2 cut(s) 1148, 1181
BalI TGGCCA 1 cut(s) 212
BanII GRGCYC 3 cut(s) 9, 299, 1959
BbsI GAAGAC 2 cut(s) 452, 1188
Bbv12I GWGCWC 4 cut(s) 9, 299, 1143, 1959
BbvCI CCTCAGC 1 cut(s) 1533
BbvI GCAGC 5 cut(s) 693, 849, 1096, 1097, 1592
BccI CCATC 6 cut(s) 131, 601, 670, 788, 1729, 2103
BceAI ACGGC 3 cut(s) 179, 1173, 1234
BcgI CGANNNNNNTGC 2 cut(s) 1762, 1796
BcnI CCSGG 2 cut(s) 185, 259
BcoDI GTCTC 5 cut(s) 243, 1042, 1559, 1588, 1619
BfaI CTAG 5 cut(s) 1238, 1733, 1925, 1937, 1944
BfmI CTRYAG 2 cut(s) 707, 863
BfoI RGCGCY 1 cut(s) 1173
BfrI CTTAAG 1 cut(s) 1319
BisI GCNGC 5 cut(s) 707, 863, 1086, 1110, 1581
BlsI GCNGC 5 cut(s) 708, 864, 1087, 1111, 1582
BmcAI AGTACT 1 cut(s) 1432
Bme1390I CCNGG 2 cut(s) 185, 259
Bme18I GGWCC 3 cut(s) 267, 868, 1234
BmeRI GACNNNNNGTC 1 cut(s) 235
BmeT110I CYCGRG 4 cut(s) 338, 490, 788, 1958
BmgBI CACGTC 2 cut(s) 216, 390
BmgT120I GGNCC 4 cut(s) 267, 868, 1234, 1409
BmiI GGNNCC 6 cut(s) 46, 268, 269, 483, 870, 1989
BmrFI CCNGG 2 cut(s) 185, 259
BmsI GCATC 5 cut(s) 736, 756, 1770, 1930, 2043
BpiI GAAGAC 2 cut(s) 452, 1188
BplI GAGNNNNNCTC 6 cut(s) 473, 505, 978, 1010, 1356, 1388
BpmI CTGGAG 5 cut(s) 647, 1024, 1194, 1235, 1612
Bpu10I CCTNAGC 1 cut(s) 1533
Bpu14I TTCGAA 1 cut(s) 1772
BpuEI CTTGAG 3 cut(s) 754, 1583, 1805
BpuMI CCSGG 2 cut(s) 185, 259
BsaBI GATNNNNATC 1 cut(s) 1271
BsaI GGTCTC 1 cut(s) 1619
BsaJI CCNNGG 3 cut(s) 789, 1618, 2019
BsaWI WCCGGW 3 cut(s) 205, 305, 326
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 764, 794
Bsc4I CCNNNNNNNGG 9 cut(s) 190, 264, 459, 491, 776, 794, 795, 1289, 1472
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 3 cut(s) 426, 1545, 1595
Bse8I GATNNNNATC 1 cut(s) 1271
BseAI TCCGGA 1 cut(s) 305
BseDI CCNNGG 3 cut(s) 789, 1618, 2019
BseGI GGATG 8 cut(s) 388, 697, 751, 799, 846, 895, 1424, 1747
BseJI GATNNNNATC 1 cut(s) 1271
BseLI CCNNNNNNNGG 9 cut(s) 190, 264, 459, 491, 776, 794, 795, 1289, 1472
BseMII CTCAG 3 cut(s) 609, 1056, 1524
BseNI ACTGG 3 cut(s) 426, 1545, 1595
BsePI GCGCGC 1 cut(s) 1688
BseRI GAGGAG 5 cut(s) 49, 494, 593, 617, 1802
BseSI GKGCMC 1 cut(s) 1814
BseXI GCAGC 5 cut(s) 693, 849, 1096, 1097, 1592
BsgI GTGCAG 1 cut(s) 656
Bsh1236I CGCG 1 cut(s) 1690
BshFI GGCC 5 cut(s) 194, 212, 1188, 1249, 1410
BsiHKAI GWGCWC 4 cut(s) 9, 299, 1143, 1959
BsiHKCI CYCGRG 4 cut(s) 338, 490, 788, 1958
BsiSI CCGG 9 cut(s) 42, 185, 206, 258, 306, 315, 327, 485, 770
BslFI GGGAC 1 cut(s) 280
BslI CCNNNNNNNGG 9 cut(s) 190, 264, 459, 491, 776, 794, 795, 1289, 1472
BsmAI GTCTC 5 cut(s) 243, 1042, 1559, 1588, 1619
BsmFI GGGAC 1 cut(s) 280
BsmI GAATGC 2 cut(s) 658, 2060
BsnI GGCC 5 cut(s) 194, 212, 1188, 1249, 1410
Bso31I GGTCTC 1 cut(s) 1619
BsoBI CYCGRG 4 cut(s) 338, 490, 788, 1958
Bsp119I TTCGAA 1 cut(s) 1772
Bsp1286I GDGCHC 5 cut(s) 9, 299, 1143, 1814, 1959
Bsp13I TCCGGA 1 cut(s) 305
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 2 cut(s) 997, 1272
BspACI CCGC 7 cut(s) 13, 25, 68, 79, 93, 172, 440
BspANI GGCC 5 cut(s) 194, 212, 1188, 1249, 1410
BspCNI CTCAG 3 cut(s) 610, 1057, 1525
BspEI TCCGGA 1 cut(s) 305
BspFNI CGCG 1 cut(s) 1690
BspHI TCATGA 2 cut(s) 979, 1831
BspLI GGNNCC 6 cut(s) 46, 268, 269, 483, 870, 1989
BspMAI CTGCAG 2 cut(s) 711, 867
BspPI GGATC 1 cut(s) 1280
BspQI GCTCTTC 1 cut(s) 287
BspT104I TTCGAA 1 cut(s) 1772
BspTI CTTAAG 1 cut(s) 1319
BspTNI GGTCTC 1 cut(s) 1619
BsrBI CCGCTC 2 cut(s) 27, 81
BsrFI RCCGGY 1 cut(s) 41
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 3 cut(s) 426, 1545, 1595
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 3 cut(s) 789, 1618, 2019
BssHII GCGCGC 1 cut(s) 1688
BssMI GATC 2 cut(s) 997, 1272
BssT1I CCWWGG 2 cut(s) 1618, 2019
Bst4CI ACNGT 6 cut(s) 373, 571, 1558, 1570, 1816, 1825
Bst6I CTCTTC 3 cut(s) 287, 1224, 1734
BstAFI CTTAAG 1 cut(s) 1319
BstAPI GCANNNNNTGC 2 cut(s) 958, 2053
BstAUI TGTACA 1 cut(s) 1007
BstBI TTCGAA 1 cut(s) 1772
BstC8I GCNNGC 6 cut(s) 43, 1336, 1690, 1906, 2058, 2070
BstDEI CTNAG 4 cut(s) 618, 1065, 1533, 1670
BstF5I GGATG 8 cut(s) 388, 697, 751, 799, 846, 895, 1424, 1747
BstFNI CGCG 1 cut(s) 1690
BstH2I RGCGCY 1 cut(s) 1173
BstHHI GCGC 5 cut(s) 721, 787, 1172, 1690, 1692
BstKTI GATC 2 cut(s) 1000, 1275
BstMAI GTCTC 5 cut(s) 243, 1042, 1559, 1588, 1619
BstMBI GATC 2 cut(s) 997, 1272
BstMWI GCNNNNNNNGC 9 cut(s) 294, 703, 892, 958, 1085, 1199, 1492, 1694, 2053
BstSCI CCNGG 2 cut(s) 183, 257
BstSFI CTRYAG 2 cut(s) 707, 863
BstSLI GKGCMC 1 cut(s) 1814
BstUI CGCG 1 cut(s) 1690
BstV1I GCAGC 5 cut(s) 693, 849, 1096, 1097, 1592
BstV2I GAAGAC 2 cut(s) 452, 1188
BsuRI GGCC 5 cut(s) 194, 212, 1188, 1249, 1410
BtrI CACGTC 2 cut(s) 216, 390
BtsCI GGATG 8 cut(s) 388, 697, 751, 799, 846, 895, 1424, 1747
BtsIMutI CAGTG 3 cut(s) 1538, 1563, 1812
Cac8I GCNNGC 6 cut(s) 43, 1336, 1690, 1906, 2058, 2070
CciI TCATGA 2 cut(s) 979, 1831
CfoI GCGC 5 cut(s) 721, 787, 1172, 1690, 1692
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 4 cut(s) 267, 868, 1234, 1409
CseI GACGC 1 cut(s) 1182
Csp6I GTAC 3 cut(s) 1008, 1431, 1804
CspCI CAANNNNNGTGG 2 cut(s) 999, 1034
CviAII CATG 3 cut(s) 980, 1711, 1832
CviQI GTAC 3 cut(s) 1008, 1431, 1804
DdeI CTNAG 4 cut(s) 618, 1065, 1533, 1670
DpnI GATC 2 cut(s) 999, 1274
DpnII GATC 2 cut(s) 997, 1272
DraI TTTAAA 1 cut(s) 1548
DriI GACNNNNNGTC 1 cut(s) 235
EaeI YGGCCR 3 cut(s) 192, 210, 1186
Eam1104I CTCTTC 3 cut(s) 287, 1224, 1734
Eam1105I GACNNNNNGTC 1 cut(s) 235
EarI CTCTTC 3 cut(s) 287, 1224, 1734
EciI GGCGGA 1 cut(s) 82
Ecl136II GAGCTC 3 cut(s) 7, 297, 1957
Eco130I CCWWGG 2 cut(s) 1618, 2019
Eco24I GRGCYC 3 cut(s) 9, 299, 1959
Eco31I GGTCTC 1 cut(s) 1619
Eco47I GGWCC 3 cut(s) 267, 868, 1234
Eco53kI GAGCTC 3 cut(s) 7, 297, 1957
Eco57I CTGAAG 1 cut(s) 1208
Eco88I CYCGRG 4 cut(s) 338, 490, 788, 1958
EcoICRI GAGCTC 3 cut(s) 7, 297, 1957
EcoO109I RGGNCCY 3 cut(s) 267, 868, 1234
EcoT14I CCWWGG 2 cut(s) 1618, 2019
EcoT38I GRGCYC 3 cut(s) 9, 299, 1959
ErhI CCWWGG 2 cut(s) 1618, 2019
FaeI CATG 3 cut(s) 983, 1714, 1835
FalI AAGNNNNNCTT 4 cut(s) 1470, 1502, 1767, 1799
FaqI GGGAC 1 cut(s) 280
FatI CATG 3 cut(s) 979, 1710, 1831
FauI CCCGC 2 cut(s) 75, 433
Fnu4HI GCNGC 5 cut(s) 707, 863, 1086, 1110, 1581
FokI GGATG 8 cut(s) 395, 704, 758, 806, 853, 902, 1431, 1754
FriOI GRGCYC 3 cut(s) 9, 299, 1959
Fsp4HI GCNGC 5 cut(s) 707, 863, 1086, 1110, 1581
FspBI CTAG 5 cut(s) 1238, 1733, 1925, 1937, 1944
GlaI GCGC 5 cut(s) 720, 786, 1171, 1689, 1691
GluI GCNGC 5 cut(s) 707, 863, 1086, 1110, 1581
GsuI CTGGAG 5 cut(s) 647, 1024, 1194, 1235, 1612
HaeII RGCGCY 1 cut(s) 1173
HaeIII GGCC 5 cut(s) 194, 212, 1188, 1249, 1410
HapII CCGG 9 cut(s) 42, 185, 206, 258, 306, 315, 327, 485, 770
HgaI GACGC 1 cut(s) 1182
HhaI GCGC 5 cut(s) 721, 787, 1172, 1690, 1692
Hin1II CATG 3 cut(s) 983, 1714, 1835
Hin6I GCGC 5 cut(s) 719, 785, 1170, 1688, 1690
HinP1I GCGC 5 cut(s) 719, 785, 1170, 1688, 1690
HincII GTYRAC 1 cut(s) 1861
HindII GTYRAC 1 cut(s) 1861
HinfI GANTC 6 cut(s) 236, 488, 538, 712, 1324, 1933
HpaI GTTAAC 1 cut(s) 1861
HpaII CCGG 9 cut(s) 42, 185, 206, 258, 306, 315, 327, 485, 770
HphI GGTGA 6 cut(s) 93, 419, 583, 896, 1487, 1691
Hpy166II GTNNAC 3 cut(s) 281, 1008, 1861
Hpy188I TCNGA 3 cut(s) 220, 250, 1066
Hpy8I GTNNAC 3 cut(s) 281, 1008, 1861
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 7 cut(s) 43, 373, 397, 406, 634, 1678, 1779
HpyCH4III ACNGT 6 cut(s) 373, 571, 1558, 1570, 1816, 1825
HpyCH4IV ACGT 5 cut(s) 215, 277, 283, 389, 1046
HpyF10VI GCNNNNNNNGC 9 cut(s) 294, 703, 892, 958, 1085, 1199, 1492, 1694, 2053
HpyF3I CTNAG 4 cut(s) 618, 1065, 1533, 1670
HpySE526I ACGT 5 cut(s) 215, 277, 283, 389, 1046
Hsp92II CATG 3 cut(s) 983, 1714, 1835
HspAI GCGC 5 cut(s) 719, 785, 1170, 1688, 1690
KflI GGGWCCC 1 cut(s) 267
Kpn2I TCCGGA 1 cut(s) 305
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
KspAI GTTAAC 1 cut(s) 1861
Kzo9I GATC 2 cut(s) 997, 1272
LguI GCTCTTC 1 cut(s) 287
Lsp1109I GCAGC 5 cut(s) 693, 849, 1096, 1097, 1592
LweI GCATC 5 cut(s) 736, 756, 1770, 1930, 2043
MaeI CTAG 5 cut(s) 1238, 1733, 1925, 1937, 1944
MaeII ACGT 5 cut(s) 215, 277, 283, 389, 1046
MaeIII GTNAC 5 cut(s) 346, 367, 385, 728, 1455
MalI GATC 2 cut(s) 999, 1274
MbiI CCGCTC 2 cut(s) 27, 81
MboI GATC 2 cut(s) 997, 1272
MfeI CAATTG 3 cut(s) 921, 1001, 1377
MhlI GDGCHC 5 cut(s) 9, 299, 1143, 1814, 1959
MlsI TGGCCA 1 cut(s) 212
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 3 cut(s) 245, 482, 547
MmeI TCCRAC 3 cut(s) 397, 627, 669
Mox20I TGGCCA 1 cut(s) 212
MroI TCCGGA 1 cut(s) 305
MroNI GCCGGC 1 cut(s) 41
MroXI GAANNNNTTC 2 cut(s) 1060, 1660
MscI TGGCCA 1 cut(s) 212
MseI TTAA 6 cut(s) 597, 1320, 1547, 1860, 1878, 2116
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 1472
MspCI CTTAAG 1 cut(s) 1319
MspI CCGG 9 cut(s) 42, 185, 206, 258, 306, 315, 327, 485, 770
MspR9I CCNGG 2 cut(s) 185, 259
MunI CAATTG 3 cut(s) 921, 1001, 1377
Mva1269I GAATGC 2 cut(s) 658, 2060
MvnI CGCG 1 cut(s) 1690
MwoI GCNNNNNNNGC 9 cut(s) 294, 703, 892, 958, 1085, 1199, 1492, 1694, 2053
NaeI GCCGGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 185, 259
NdeII GATC 2 cut(s) 997, 1272
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 3 cut(s) 983, 1714, 1835
NlaIV GGNNCC 6 cut(s) 46, 268, 269, 483, 870, 1989
NmuCI GTSAC 4 cut(s) 346, 367, 385, 728
NspV TTCGAA 1 cut(s) 1772
PaeR7I CTCGAG 2 cut(s) 338, 1958
PagI TCATGA 2 cut(s) 979, 1831
PalAI GGCGCGCC 1 cut(s) 1688
PauI GCGCGC 1 cut(s) 1688
PciSI GCTCTTC 1 cut(s) 287
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PctI GAATGC 2 cut(s) 658, 2060
PdiI GCCGGC 1 cut(s) 43
PdmI GAANNNNTTC 2 cut(s) 1060, 1660
PfeI GAWTC 3 cut(s) 712, 1324, 1933
PflMI CCANNNNNTGG 1 cut(s) 1472
PfoI TCCNGGA 1 cut(s) 257
PkrI GCNGC 5 cut(s) 708, 864, 1087, 1111, 1582
PleI GAGTC 3 cut(s) 244, 482, 546
PpsI GAGTC 3 cut(s) 244, 482, 546
PpuMI RGGWCCY 3 cut(s) 267, 868, 1234
Psp124BI GAGCTC 3 cut(s) 9, 299, 1959
Psp5II RGGWCCY 3 cut(s) 267, 868, 1234
PspN4I GGNNCC 6 cut(s) 46, 268, 269, 483, 870, 1989
PspPI GGNCC 4 cut(s) 267, 868, 1234, 1409
PspPPI RGGWCCY 3 cut(s) 267, 868, 1234
PspXI VCTCGAGB 1 cut(s) 1958
PstI CTGCAG 2 cut(s) 711, 867
PteI GCGCGC 1 cut(s) 1688
PvuII CAGCTG 1 cut(s) 1472
RsaI GTAC 3 cut(s) 1009, 1432, 1805
RsaNI GTAC 3 cut(s) 1008, 1431, 1804
SacI GAGCTC 3 cut(s) 9, 299, 1959
SapI GCTCTTC 1 cut(s) 287
SaqAI TTAA 6 cut(s) 597, 1320, 1547, 1860, 1878, 2116
SatI GCNGC 5 cut(s) 707, 863, 1086, 1110, 1581
Sau3AI GATC 2 cut(s) 997, 1272
Sau96I GGNCC 4 cut(s) 267, 868, 1234, 1409
ScaI AGTACT 1 cut(s) 1432
SchI GAGTC 3 cut(s) 245, 482, 547
ScrFI CCNGG 2 cut(s) 185, 259
SduI GDGCHC 5 cut(s) 9, 299, 1143, 1814, 1959
SfaNI GCATC 5 cut(s) 736, 756, 1770, 1930, 2043
SfcI CTRYAG 2 cut(s) 707, 863
Sfr274I CTCGAG 2 cut(s) 338, 1958
SfuI TTCGAA 1 cut(s) 1772
SgsI GGCGCGCC 1 cut(s) 1688
SinI GGWCC 3 cut(s) 267, 868, 1234
SlaI CTCGAG 2 cut(s) 338, 1958
SmiI ATTTAAAT 1 cut(s) 1548
SmlI CTYRAG 6 cut(s) 338, 733, 1319, 1562, 1784, 1958
SmoI CTYRAG 6 cut(s) 338, 733, 1319, 1562, 1784, 1958
SsiI CCGC 7 cut(s) 13, 25, 68, 79, 93, 172, 440
SspMI CTAG 5 cut(s) 1238, 1733, 1925, 1937, 1944
SstI GAGCTC 3 cut(s) 9, 299, 1959
StyD4I CCNGG 2 cut(s) 183, 257
StyI CCWWGG 2 cut(s) 1618, 2019
SwaI ATTTAAAT 1 cut(s) 1548
TaaI ACNGT 6 cut(s) 373, 571, 1558, 1570, 1816, 1825
TaiI ACGT 5 cut(s) 218, 280, 286, 392, 1049
TaqII GACCGA 2 cut(s) 999, 1851
TatI WGTACW 3 cut(s) 1007, 1430, 1803
TfiI GAWTC 3 cut(s) 712, 1324, 1933
Tru1I TTAA 6 cut(s) 597, 1320, 1547, 1860, 1878, 2116
Tru9I TTAA 6 cut(s) 597, 1320, 1547, 1860, 1878, 2116
TscAI CASTG 3 cut(s) 1545, 1563, 1819
TseFI GTSAC 4 cut(s) 346, 367, 385, 728
TseI GCWGC 5 cut(s) 706, 862, 1085, 1109, 1580
Tsp45I GTSAC 4 cut(s) 346, 367, 385, 728
TspDTI ATGAA 4 cut(s) 536, 1699, 1758, 1834
TspRI CASTG 3 cut(s) 1545, 1563, 1819
Van91I CCANNNNNTGG 1 cut(s) 1472
Vha464I CTTAAG 1 cut(s) 1319
VpaK11BI GGWCC 3 cut(s) 267, 868, 1234
XapI RAATTY 1 cut(s) 1180
XbaI TCTAGA 2 cut(s) 1924, 1936
XhoI CTCGAG 2 cut(s) 338, 1958
XmnI GAANNNNTTC 2 cut(s) 1060, 1660
XspI CTAG 5 cut(s) 1238, 1733, 1925, 1937, 1944
ZrmI AGTACT 1 cut(s) 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.