MD15G1331800.v1.1

ABC transporter F family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000380
Physical Location & Seq
Reverse (-)
36796489 .. 36801283
4795 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1331800.v1.1.491

Sequence Viewer

Length: 2166 bp
ATGGAATTGAGCTCTAAGCTCCACCGCCTCCACCTCCGCTCCACCTTCATCAGCGGCTCATCCCCTTTCGACGCTCGCGCCACCGTTCGCCCTCCCCGGCTCCGCTCCCTTTCCAATCGGATAGCTTCTCAATCACTTAGAGATAGCAACAACACTAACTCCATCAAAACCACTAGTCATCTACAGAAATCCACAACCCCAATTCCTAAATTTGCAACCCCCTTATCGGCGGTGGCTCTTGAAACATCCGTCGCCGAAACCACCGCCAGTGACGACGATGTCGAGTCTTTGTTCTCGGATAATTCCAAGAACGAATCTCAGAACAGACGTGGTAAAAAGAATTCGAATAATTCCGGGGCTTCCAGTATTTCTTCTGGTGTGAAGCTCGAAAATGTCCGAAAGAGCTACAAGGGCGTCACTGTGTTGAAAGATGTCACTTGGGAAGTCAAAAAGGGAGATAAGGTTGGATTGGTGGGTGTAAATGGAGCAGGAAAAACTACCCAAATGAGAATTATCGCCGGTTTAGAAGAACCCGATTCCGGCAATGTCATAAAGGCGAAACCCAACATGAAGATCGCGTTTTTGAGCCAGGAATTCGAGGTTTCGTTGAGTAGGACGGTCAAGGAGGAGTTTATGAGTGCGTTTAAAGAGGAAATGGAAGTGGCTGGGAAGATGGAGAAGGTGCAAAAGGCGTTGGAGAGTTCCGTTAACGATTTGGAGTTGATGGGAAGGCTTTTGGATGAGTTTGATAAGCTTCAGAATCGGGCGCAGGCGGCTGACTTGGATATGGTGGATTCAAAGATTAATAAGCTGATGCCGGAACTCGGGTTTGCTCCAGAGGATACTGATAGATTGGTGGCATCCTTTAGCAGTGGTTGGCAGATGAGGATGTCGCTTGGGAAGATTTTACTTCAGGATCCAGATTTACTACTGTTGGATGAGCCTACAAATCACCTTGACCTTGACACAATTGAGTGGCTCGAGGATTATCTGAATCGGCAAGATGTGCCAATGGTTATAATATCTCATGACAGAGCATTTCTAGATCAGTTATGTACAAAAATAGTGGAAACAGATATGGGTGTCTCCAGGACATATGAGGGAAATTACTCTCAGTATATTCTGGCAAAGGCGGCATGGATTGAAACCCAAAATGCTGCTTGGGAGAAGCAACAGAAGGAAATCGAGCAGACAAGAGACTTGATACACAGGCTGGGAGCTGGAGCTAATTCTGGCCGTGCTTCTTCTGCTGAAAAGAAGCTGGAGAAACTTCAGGAAGATGATCTAGTTGAAAGGCCGTTCCAGAGGAAACAAATGAAGATCAGGTTTCCTGAGCGGGGACGAAGTGGAAGATTTGTTGCAACGATTAAGAATCTGGAATTTGGCTTTGGGGATAAGGTCCTATTTAACAGGGCAAATCTTACGATTGAAAGGGGGGAGAAAATTGCCATTATTGGCCCAAATGGATGTGGAAAGAGTACGTTGCTGAAACTAATAATGGGTTTACAAAAGCCAATAGCAGGAGAAGTTGAGATTGGGGAGCATAATGTCCTACCAAACTATTTTGAGCAAAATCAGGCCGAGGCACTTGATTTAAATAAAACAGTGCTTGAGACTGTAGAAGAAGCTGCAGAGGACTGGAGACTTGATGATATAAAGGGTCTCCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACAGAAAGGTTTCCCTGTTGAGTGGTGGCGAGAAGGCACGCCTTGCCTTTTGCAAGTTCATGGTAAAGCCGTCAACTCTGCTAGTTTTGGATGAACCAACAAATCACTTGGATATTCCTTCAAAAGAGATGCTTGAGGAGGCAATCACGGAGTACAAGGGCACTGTCATCACAGTTTCTCATGACCGATACTTCATAAAGCAAATAGTTAATAGAGTAGTGGAAGTTAAAGATTGCAAGTTGCAAAATTATGCAGGAGATTACAATTATTATCTAGAAAAGAATCTTGATGCTAGAGAAAGAGAGCTTGAGCGTGAGGCCGAGATCGAAGAAAAGGCTCCTAAAGTGAAAGCAAAGTCAAAGATGTCTAAGGCTGAGAAGGAAGCTCGGAAGAAGCAAAAGATGCAGGCATTTCAGCAAGCAAAGGCCAAATCAAAAGGAACAAAGAATGCCAAGAGATGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0043207 GO:0050896 GO:0051704 GO:0051707
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_tran ABC_tran_Xtn

Protein Analysis

722

Amino Acids

81.18

Weight (kDa)

8.41

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 142 - 317 4.2e-23 ABC transporter
ABC_tran_Xtn PF12848 356 - 443 2.4e-19 ABC transporter
ABC_tran PF00005 470 - 601 2.6e-27 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09930
fragaria_vesca FvH4_1g22620
malus_domestica MD01G1020400.v1.1 MD01G1020500.v1.1 MD15G1331800.v1.1
prunus_persica Prupe.6G171800_v2.0.a1 Prupe.6G171800_v2.0.a1
pyrus_communis pycom15g29330
rosa_chinensis RchiOBHm_Chr1g0349811 RchiOBHm_Chr2g0116631 RchiOBHm_Chr2g0116661 RchiOBHm_Chr2g0116701 RchiOBHm_Chr2g0116721 RchiOBHm_Chr2g0116821 RchiOBHm_Chr2g0116831 RchiOBHm_Chr2g0137191 RchiOBHm_Chr4g0436571 RchiOBHm_Chr5g0033691 RchiOBHm_Chr5g0080211 RchiOBHm_Chr7g0224491
rosa_laevigata RLG00000001144 RLG00000001242 RLG00000008715 RLG00000011571 RLG00000013376 RLG00000018295 RLG00000018297 RLG00000018299 RLG00000018304 RLG00000018340 RLG00000019297
rosa_multiflora Rmu_co8219302.1_g000001 Rmu_co8228065.1_g000001 Rmu_co8391111.1_g000001 Rmu_sc0001896.1_g000033 Rmu_sc0003126.1_g000001 Rmu_sc0004191.1_g000001 Rmu_sc0004942.1_g000016 Rmu_sc0005450.1_g000015 Rmu_sc0010198.1_g000002 Rmu_sc0011574.1_g000003 Rmu_sc0020362.1_g000001 Rmu_sc0020362.1_g000002 Rmu_sc0026531.1_g000001
rosa_roxburghii Rroxscaffold_1G00010030 Rroxscaffold_1G00018300 Rroxscaffold_1G00021420 Rroxscaffold_2G00089320 Rroxscaffold_2G00126980 Rroxscaffold_2G00127000 Rroxscaffold_2G00144860 Rroxscaffold_6G00390340 Rroxscaffold_6G00390350 Rroxscaffold_6G00394730 Rroxscaffold_6G00423750
rosa_rugosa Rorug01G0049700 Rorug01G0284700 Rorug02G0208300 Rorug02G0208400 Rorug02G0208500 Rorug02G0208600 Rorug06G0216100 Rorug06G0216200 Rorug06G0216300
rosa_samantha Rh1AG026000 Rh1AG205600 Rh1AG270100 Rh1CG024200 Rh1DG146900 Rh1DG206100 Rh2AG263300 Rh2AG263500 Rh2AG263700 Rh2AG264100 Rh2AG264200 Rh2AG264800 Rh2BG275100 Rh2BG275200 Rh2BG275300 Rh2BG275500 Rh2BG278500 Rh2CG297300 Rh2CG302200 Rh2DG271500 Rh2DG271600 Rh2DG272100 Rh2DG290100 Rh2DG290200 Rh2DG290700 Rh3AG071300 Rh3CG072500 Rh5AG478400 Rh6AG079600 Rh6AG220800 Rh6BG131400 Rh6DG116900 Rh6DG391500 Rh7AG379600 Rh7CG399100 Rh7CG429600
rosa_wichuraiana Rw2G020730 Rw2G020760 Rw2G051970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
AasI GACNNNNNNGTC 1 cut(s) 278
AccB7I CCANNNNNTGG 1 cut(s) 2157
AccBSI CCGCTC 3 cut(s) 39, 105, 1336
AccII CGCG 2 cut(s) 78, 578
AciI CCGC 9 cut(s) 25, 37, 54, 103, 230, 264, 773, 1133, 1336
AclWI GGATC 2 cut(s) 911, 924
AcoI YGGCCR 1 cut(s) 1234
AcsI RAATTY 4 cut(s) 209, 340, 593, 1379
AcuI CTGAAG 3 cut(s) 740, 896, 1256
AcyI GRCGYC 1 cut(s) 414
AfaI GTAC 3 cut(s) 1057, 1480, 1853
AfiI CCNNNNNNNGG 6 cut(s) 226, 539, 824, 1337, 1520, 2157
AgsI TTSAA 8 cut(s) 242, 427, 798, 1145, 1292, 1430, 1684, 1821
AhlI ACTAGT 1 cut(s) 173
AjiI CACGTC 1 cut(s) 329
AjnI CCWGG 2 cut(s) 588, 1088
AjuI GAANNNNNNNTTGG 4 cut(s) 1371, 1403, 1518, 1550
Alw21I GWGCWC 1 cut(s) 14
Alw26I GTCTC 5 cut(s) 1090, 1191, 1607, 1636, 1667
AlwI GGATC 2 cut(s) 911, 924
Ama87I CYCGRG 2 cut(s) 824, 980
AoxI GGCC 6 cut(s) 1234, 1295, 1456, 1578, 2016, 2124
ApeKI GCWGC 2 cut(s) 1157, 1628
ApoI RAATTY 4 cut(s) 209, 340, 593, 1379
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 1 cut(s) 1708
AspLEI GCGC 2 cut(s) 80, 769
AspS9I GGNCC 2 cut(s) 1399, 1457
AsuC2I CCSGG 2 cut(s) 97, 355
AsuHPI GGTGA 1 cut(s) 944
AsuII TTCGAA 1 cut(s) 344
AvaI CYCGRG 2 cut(s) 824, 980
AvaII GGWCC 1 cut(s) 1399
BaeGI GKGCMC 1 cut(s) 1862
BamHI GGATCC 1 cut(s) 916
BanII GRGCYC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 14
BbvI GCAGC 2 cut(s) 1144, 1615
BccI CCATC 4 cut(s) 170, 667, 718, 2151
BceAI ACGGC 3 cut(s) 1221, 1282, 1753
BciT130I CCWGG 2 cut(s) 590, 1090
BciVI GTATCC 1 cut(s) 835
BcnI CCSGG 2 cut(s) 97, 355
BcoDI GTCTC 5 cut(s) 1090, 1191, 1607, 1636, 1667
BcuI ACTAGT 1 cut(s) 173
BfaI CTAG 6 cut(s) 174, 1043, 1286, 1781, 1973, 1992
BfmI CTRYAG 3 cut(s) 182, 1617, 1629
BfuI GTATCC 1 cut(s) 835
BisI GCNGC 5 cut(s) 55, 774, 1134, 1158, 1629
BlsI GCNGC 5 cut(s) 56, 775, 1135, 1159, 1630
Bme1390I CCNGG 4 cut(s) 97, 355, 590, 1090
Bme18I GGWCC 1 cut(s) 1399
BmeT110I CYCGRG 2 cut(s) 824, 980
BmgBI CACGTC 1 cut(s) 329
BmgT120I GGNCC 2 cut(s) 1399, 1457
BmiI GGNNCC 3 cut(s) 101, 918, 2037
BmrFI CCNGG 4 cut(s) 97, 355, 590, 1090
BmsI GCATC 5 cut(s) 804, 869, 1818, 1978, 2091
BpmI CTGGAG 5 cut(s) 819, 1072, 1242, 1283, 1660
Bpu10I CCTNAGC 1 cut(s) 1332
Bpu14I TTCGAA 1 cut(s) 344
BpuEI CTTGAG 3 cut(s) 1631, 1853, 2027
BpuMI CCSGG 2 cut(s) 97, 355
BsaHI GRCGYC 1 cut(s) 414
BsaI GGTCTC 1 cut(s) 1667
BsaJI CCNNGG 4 cut(s) 95, 354, 1581, 1666
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 143, 173, 447, 477
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 539, 824, 1337, 1520, 2157
Bse118I RCCGGY 1 cut(s) 518
Bse1I ACTGG 3 cut(s) 267, 363, 1643
Bse3DI GCAATG 1 cut(s) 550
BseBI CCWGG 2 cut(s) 590, 1090
BseDI CCNNGG 4 cut(s) 95, 354, 1581, 1666
BseGI GGATG 8 cut(s) 59, 245, 745, 860, 894, 943, 1472, 1795
BseLI CCNNNNNNNGG 6 cut(s) 226, 539, 824, 1337, 1520, 2157
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 4 cut(s) 332, 1127, 1323, 2064
BseNI ACTGG 3 cut(s) 267, 363, 1643
BseRI GAGGAG 2 cut(s) 641, 1850
BseSI GKGCMC 1 cut(s) 1862
BseXI GCAGC 2 cut(s) 1144, 1615
BseYI CCCAGC 2 cut(s) 665, 1213
Bsh1236I CGCG 2 cut(s) 78, 578
BshFI GGCC 6 cut(s) 1236, 1297, 1458, 1580, 2018, 2126
BsiHKAI GWGCWC 1 cut(s) 14
BsiHKCI CYCGRG 2 cut(s) 824, 980
BsiSI CCGG 5 cut(s) 97, 354, 519, 540, 818
BslFI GGGAC 1 cut(s) 1353
BslI CCNNNNNNNGG 6 cut(s) 226, 539, 824, 1337, 1520, 2157
BsmAI GTCTC 5 cut(s) 1090, 1191, 1607, 1636, 1667
BsmFI GGGAC 1 cut(s) 1353
BsmI GAATGC 1 cut(s) 2152
BsnI GGCC 6 cut(s) 1236, 1297, 1458, 1580, 2018, 2126
Bso31I GGTCTC 1 cut(s) 1667
BsoBI CYCGRG 2 cut(s) 824, 980
Bsp119I TTCGAA 1 cut(s) 344
Bsp1286I GDGCHC 2 cut(s) 14, 1862
Bsp1407I TGTACA 1 cut(s) 1055
Bsp143I GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
BspACI CCGC 9 cut(s) 25, 37, 54, 103, 230, 264, 773, 1133, 1336
BspANI GGCC 6 cut(s) 1236, 1297, 1458, 1580, 2018, 2126
BspCNI CTCAG 4 cut(s) 331, 1126, 1324, 2065
BspFNI CGCG 2 cut(s) 78, 578
BspHI TCATGA 2 cut(s) 1027, 1879
BspLI GGNNCC 3 cut(s) 101, 918, 2037
BspMAI CTGCAG 1 cut(s) 1633
BspPI GGATC 2 cut(s) 911, 924
BspT104I TTCGAA 1 cut(s) 344
BspTNI GGTCTC 1 cut(s) 1667
BsrBI CCGCTC 3 cut(s) 39, 105, 1336
BsrDI GCAATG 1 cut(s) 550
BsrFI RCCGGY 1 cut(s) 518
BsrGI TGTACA 1 cut(s) 1055
BsrI ACTGG 3 cut(s) 267, 363, 1643
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 4 cut(s) 95, 354, 1581, 1666
BssMI GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
BssNI GRCGYC 1 cut(s) 414
BssT1I CCWWGG 1 cut(s) 1666
Bst2UI CCWGG 2 cut(s) 590, 1090
Bst4CI ACNGT 8 cut(s) 85, 421, 619, 933, 1606, 1618, 1864, 1873
BstACI GRCGYC 1 cut(s) 414
BstAPI GCANNNNNTGC 3 cut(s) 1006, 1742, 2101
BstAUI TGTACA 1 cut(s) 1055
BstBI TTCGAA 1 cut(s) 344
BstC8I GCNNGC 5 cut(s) 76, 771, 1738, 2106, 2118
BstDEI CTNAG 7 cut(s) 15, 137, 318, 1113, 1332, 2067, 2073
BstF5I GGATG 8 cut(s) 59, 245, 745, 860, 894, 943, 1472, 1795
BstFNI CGCG 2 cut(s) 78, 578
BstHHI GCGC 2 cut(s) 80, 769
BstKTI GATC 6 cut(s) 576, 919, 1048, 1285, 1323, 2025
BstMAI GTCTC 5 cut(s) 1090, 1191, 1607, 1636, 1667
BstMBI GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
BstMWI GCNNNNNNNGC 7 cut(s) 411, 773, 1006, 1133, 1247, 1742, 2101
BstNI CCWGG 2 cut(s) 590, 1090
BstSCI CCNGG 4 cut(s) 95, 353, 588, 1088
BstSFI CTRYAG 3 cut(s) 182, 1617, 1629
BstSLI GKGCMC 1 cut(s) 1862
BstUI CGCG 2 cut(s) 78, 578
BstV1I GCAGC 2 cut(s) 1144, 1615
BstX2I RGATCY 1 cut(s) 916
BstYI RGATCY 1 cut(s) 916
BsuI GTATCC 1 cut(s) 835
BsuRI GGCC 6 cut(s) 1236, 1297, 1458, 1580, 2018, 2126
BtrI CACGTC 1 cut(s) 329
BtsCI GGATG 8 cut(s) 59, 245, 745, 860, 894, 943, 1472, 1795
BtsI GCAGTG 1 cut(s) 877
BtsIMutI CAGTG 5 cut(s) 274, 417, 877, 1611, 1860
Cac8I GCNNGC 5 cut(s) 76, 771, 1738, 2106, 2118
CciI TCATGA 2 cut(s) 1027, 1879
CfoI GCGC 2 cut(s) 80, 769
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 2 cut(s) 1399, 1457
CseI GACGC 2 cut(s) 80, 403
Csp6I GTAC 3 cut(s) 1056, 1479, 1852
CspCI CAANNNNNGTGG 2 cut(s) 1047, 1082
CviAII CATG 5 cut(s) 568, 1028, 1137, 1759, 1880
CviQI GTAC 3 cut(s) 1056, 1479, 1852
DdeI CTNAG 7 cut(s) 15, 137, 318, 1113, 1332, 2067, 2073
DpnI GATC 6 cut(s) 575, 918, 1047, 1284, 1322, 2024
DpnII GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
DraI TTTAAA 2 cut(s) 646, 1596
DrdI GACNNNNNNGTC 1 cut(s) 278
DseDI GACNNNNNNGTC 1 cut(s) 278
EaeI YGGCCR 1 cut(s) 1234
Ecl136II GAGCTC 1 cut(s) 12
Eco130I CCWWGG 1 cut(s) 1666
Eco24I GRGCYC 1 cut(s) 14
Eco31I GGTCTC 1 cut(s) 1667
Eco47I GGWCC 1 cut(s) 1399
Eco53kI GAGCTC 1 cut(s) 12
Eco57I CTGAAG 3 cut(s) 740, 896, 1256
Eco88I CYCGRG 2 cut(s) 824, 980
EcoICRI GAGCTC 1 cut(s) 12
EcoO109I RGGNCCY 1 cut(s) 1399
EcoRI GAATTC 2 cut(s) 340, 593
EcoRII CCWGG 2 cut(s) 588, 1088
EcoT14I CCWWGG 1 cut(s) 1666
EcoT38I GRGCYC 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 1666
FaeI CATG 5 cut(s) 571, 1031, 1140, 1762, 1883
FalI AAGNNNNNCTT 2 cut(s) 1815, 1847
FaqI GGGAC 1 cut(s) 1353
FatI CATG 5 cut(s) 567, 1027, 1136, 1758, 1879
FauI CCCGC 1 cut(s) 1329
FauNDI CATATG 1 cut(s) 1096
Fnu4HI GCNGC 5 cut(s) 55, 774, 1134, 1158, 1629
FokI GGATG 8 cut(s) 46, 232, 752, 847, 901, 950, 1479, 1802
FriOI GRGCYC 1 cut(s) 14
Fsp4HI GCNGC 5 cut(s) 55, 774, 1134, 1158, 1629
FspBI CTAG 6 cut(s) 174, 1043, 1286, 1781, 1973, 1992
GlaI GCGC 2 cut(s) 79, 768
GluI GCNGC 5 cut(s) 55, 774, 1134, 1158, 1629
GsaI CCCAGC 2 cut(s) 669, 1217
GsuI CTGGAG 5 cut(s) 819, 1072, 1242, 1283, 1660
HaeIII GGCC 6 cut(s) 1236, 1297, 1458, 1580, 2018, 2126
HapII CCGG 5 cut(s) 97, 354, 519, 540, 818
HgaI GACGC 2 cut(s) 80, 403
HhaI GCGC 2 cut(s) 80, 769
Hin1I GRCGYC 1 cut(s) 414
Hin1II CATG 5 cut(s) 571, 1031, 1140, 1762, 1883
Hin6I GCGC 2 cut(s) 78, 767
HinP1I GCGC 2 cut(s) 78, 767
HincII GTYRAC 2 cut(s) 709, 1773
HindII GTYRAC 2 cut(s) 709, 1773
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 8 cut(s) 284, 314, 536, 760, 794, 994, 1372, 1981
HpaI GTTAAC 1 cut(s) 709
HpaII CCGG 5 cut(s) 97, 354, 519, 540, 818
HphI GGTGA 1 cut(s) 944
Hpy166II GTNNAC 3 cut(s) 709, 1505, 1773
Hpy188I TCNGA 8 cut(s) 120, 298, 321, 398, 759, 993, 1690, 2088
Hpy8I GTNNAC 3 cut(s) 709, 1505, 1773
Hpy99I CGWCG 3 cut(s) 74, 254, 278
HpyAV CCTTC 7 cut(s) 55, 673, 723, 1171, 1726, 1827, 2071
HpyCH4III ACNGT 8 cut(s) 85, 421, 619, 933, 1606, 1618, 1864, 1873
HpyCH4IV ACGT 2 cut(s) 328, 1481
HpyCH4V TGCA 9 cut(s) 215, 685, 1361, 1631, 1752, 1935, 1942, 1952, 2104
HpyF10VI GCNNNNNNNGC 7 cut(s) 411, 773, 1006, 1133, 1247, 1742, 2101
HpyF3I CTNAG 7 cut(s) 15, 137, 318, 1113, 1332, 2067, 2073
HpySE526I ACGT 2 cut(s) 328, 1481
Hsp92I GRCGYC 1 cut(s) 414
Hsp92II CATG 5 cut(s) 571, 1031, 1140, 1762, 1883
HspAI GCGC 2 cut(s) 78, 767
KspAI GTTAAC 1 cut(s) 709
Kzo9I GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
Lsp1109I GCAGC 2 cut(s) 1144, 1615
LweI GCATC 5 cut(s) 804, 869, 1818, 1978, 2091
MaeI CTAG 6 cut(s) 174, 1043, 1286, 1781, 1973, 1992
MaeII ACGT 2 cut(s) 328, 1481
MaeIII GTNAC 3 cut(s) 269, 415, 433
MalI GATC 6 cut(s) 575, 918, 1047, 1284, 1322, 2024
MbiI CCGCTC 3 cut(s) 39, 105, 1336
MboI GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
MfeI CAATTG 1 cut(s) 969
MflI RGATCY 1 cut(s) 916
MhlI GDGCHC 2 cut(s) 14, 1862
MlyI GAGTC 1 cut(s) 293
MmeI TCCRAC 3 cut(s) 445, 675, 915
MroXI GAANNNNTTC 1 cut(s) 1708
MseI TTAA 9 cut(s) 645, 708, 804, 1368, 1407, 1595, 1908, 1926, 2164
MspA1I CMGCKG 1 cut(s) 54
MspI CCGG 5 cut(s) 97, 354, 519, 540, 818
MspR9I CCNGG 4 cut(s) 97, 355, 590, 1090
MunI CAATTG 1 cut(s) 969
Mva1269I GAATGC 1 cut(s) 2152
MvaI CCWGG 2 cut(s) 590, 1090
MvnI CGCG 2 cut(s) 78, 578
MwoI GCNNNNNNNGC 7 cut(s) 411, 773, 1006, 1133, 1247, 1742, 2101
NciI CCSGG 2 cut(s) 97, 355
NdeI CATATG 1 cut(s) 1096
NdeII GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
NlaIII CATG 5 cut(s) 571, 1031, 1140, 1762, 1883
NlaIV GGNNCC 3 cut(s) 101, 918, 2037
NmeAIII GCCGAG 2 cut(s) 1606, 2044
NmuCI GTSAC 3 cut(s) 269, 415, 433
NspV TTCGAA 1 cut(s) 344
PaeR7I CTCGAG 1 cut(s) 980
PagI TCATGA 2 cut(s) 1027, 1879
PcsI WCGNNNNNNNCGW 1 cut(s) 279
PctI GAATGC 1 cut(s) 2152
PdmI GAANNNNTTC 1 cut(s) 1708
PfeI GAWTC 7 cut(s) 314, 536, 760, 794, 994, 1372, 1981
PflFI GACNNNGTC 1 cut(s) 278
PflMI CCANNNNNTGG 1 cut(s) 2157
PfoI TCCNGGA 1 cut(s) 1088
PkrI GCNGC 5 cut(s) 56, 775, 1135, 1159, 1630
PleI GAGTC 1 cut(s) 292
PpsI GAGTC 1 cut(s) 292
PpuMI RGGWCCY 1 cut(s) 1399
PshBI ATTAAT 1 cut(s) 804
PsiI TTATAA 1 cut(s) 1019
Psp124BI GAGCTC 1 cut(s) 14
Psp5II RGGWCCY 1 cut(s) 1399
Psp6I CCWGG 2 cut(s) 588, 1088
PspFI CCCAGC 2 cut(s) 665, 1213
PspGI CCWGG 2 cut(s) 588, 1088
PspN4I GGNNCC 3 cut(s) 101, 918, 2037
PspPI GGNCC 2 cut(s) 1399, 1457
PspPPI RGGWCCY 1 cut(s) 1399
PspXI VCTCGAGB 1 cut(s) 980
PstI CTGCAG 1 cut(s) 1633
PsuI RGATCY 1 cut(s) 916
PsyI GACNNNGTC 1 cut(s) 278
RsaI GTAC 3 cut(s) 1057, 1480, 1853
RsaNI GTAC 3 cut(s) 1056, 1479, 1852
SacI GAGCTC 1 cut(s) 14
SaqAI TTAA 9 cut(s) 645, 708, 804, 1368, 1407, 1595, 1908, 1926, 2164
SatI GCNGC 5 cut(s) 55, 774, 1134, 1158, 1629
Sau3AI GATC 6 cut(s) 573, 916, 1045, 1282, 1320, 2022
Sau96I GGNCC 2 cut(s) 1399, 1457
SchI GAGTC 1 cut(s) 293
ScrFI CCNGG 4 cut(s) 97, 355, 590, 1090
SduI GDGCHC 2 cut(s) 14, 1862
SfaNI GCATC 5 cut(s) 804, 869, 1818, 1978, 2091
SfcI CTRYAG 3 cut(s) 182, 1617, 1629
Sfr274I CTCGAG 1 cut(s) 980
SfuI TTCGAA 1 cut(s) 344
SinI GGWCC 1 cut(s) 1399
SlaI CTCGAG 1 cut(s) 980
SmiI ATTTAAAT 1 cut(s) 1596
SmlI CTYRAG 4 cut(s) 980, 1610, 1832, 2006
SmoI CTYRAG 4 cut(s) 980, 1610, 1832, 2006
SpeI ACTAGT 1 cut(s) 173
SsiI CCGC 9 cut(s) 25, 37, 54, 103, 230, 264, 773, 1133, 1336
SspMI CTAG 6 cut(s) 174, 1043, 1286, 1781, 1973, 1992
SstI GAGCTC 1 cut(s) 14
StyD4I CCNGG 4 cut(s) 95, 353, 588, 1088
StyI CCWWGG 1 cut(s) 1666
SwaI ATTTAAAT 1 cut(s) 1596
TaaI ACNGT 8 cut(s) 85, 421, 619, 933, 1606, 1618, 1864, 1873
TaiI ACGT 2 cut(s) 331, 1484
TaqI TCGA 8 cut(s) 69, 282, 344, 387, 597, 981, 1185, 2025
TaqII GACCGA 1 cut(s) 1899
TatI WGTACW 2 cut(s) 1055, 1851
TauI GCSGC 3 cut(s) 57, 776, 1136
TfiI GAWTC 7 cut(s) 314, 536, 760, 794, 994, 1372, 1981
Tru1I TTAA 9 cut(s) 645, 708, 804, 1368, 1407, 1595, 1908, 1926, 2164
Tru9I TTAA 9 cut(s) 645, 708, 804, 1368, 1407, 1595, 1908, 1926, 2164
TscAI CASTG 5 cut(s) 274, 424, 877, 1611, 1867
TseFI GTSAC 3 cut(s) 269, 415, 433
TseI GCWGC 2 cut(s) 1157, 1628
Tsp45I GTSAC 3 cut(s) 269, 415, 433
TspDTI ATGAA 6 cut(s) 37, 584, 1331, 1747, 1806, 1882
TspGWI ACGGA 3 cut(s) 238, 694, 1862
TspRI CASTG 5 cut(s) 274, 424, 877, 1611, 1867
Tth111I GACNNNGTC 1 cut(s) 278
Van91I CCANNNNNTGG 1 cut(s) 2157
VpaK11BI GGWCC 1 cut(s) 1399
VspI ATTAAT 1 cut(s) 804
XapI RAATTY 4 cut(s) 209, 340, 593, 1379
XbaI TCTAGA 2 cut(s) 1042, 1972
XhoI CTCGAG 1 cut(s) 980
XmnI GAANNNNTTC 1 cut(s) 1708
XspI CTAG 6 cut(s) 174, 1043, 1286, 1781, 1973, 1992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.