Rroxscaffold_2G00127000

ABC transporter F family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
62411870 .. 62417006
5137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00127000.1

Sequence Viewer

Length: 2151 bp
ATGGATTTAGCCTCCAAGCTCCACCGCCTTGACCTCCGCTCCCCCTTCCTCGCCGGCTCCGCCCCCTTCGACTCCCGCACCACCTCTCTCCCGCCTCGCCTCCGCTCCCTCTCGCAACGAATCGCCGCCCAACCCACTAAAGCTAACTCCAACTCCATCAAAACCACTACTTTATTCAAACCCAGAACACCCAGTTCCCAGATACGAACTGGGCTGCCGGCCTTGGCCGTCGAAACTCCGGTGGCCACGGCGGAGGAGAACGACATTGAGTCTTTGTTCTCGGACGATTCCGGGACTGGGAATAACGAACGTAAACGTGGCAAGAAGAATTCGAATTCTGGGGCTTCCGGGATTTCTTCTGGTGTTAAGCTTGAAAATGTGAGGAAAAGCTATAAGGGTGTGACTGTGTTGAAGGATGTGACTTGGGAAGTGAAGAAGGGGGAGAAGGTTGGATTGGTGGGGGTGAATGGGGCAGGGAAGACGACCCAGATGAGGATTATTGCTGGTTTGGAAGAACCGGATTCGGGGAATGTGATAAAGGCGAAATCGAATATGAAGATTGCGTTTTTGAGTCAAGAATTCGAGGTTTCAATGAGTAAAACAGTGAGGGAGGAGTTTATGACTGCTTTTAAGGAGGAGATGGAGGTGGCAGAGAGGCTGGAGAAGGTGCAGAAGGCGTTGGAGAGTGCTGTGGAGGATATGGAGTTGATGGGGAGGCTGTTGGATGAGCTTGATAAGCTTCAGAATCGGGCGCAGGAGTGTGACTTGAGTATGGTGGATGCGAAGATTAGTAAGTTGATGCCGGAACTTGGGTTTGCGCCGGAGGATGGGGATAGGTTGGTGGCTTCGTTTAGTAGTGGTTGGCAGATGAGGATGTCACTTGGGAAGATTTTGCTTCAGGACCCTGATTTACTACTGCTGGATGAGCCTACAAATCACCTTGACCTTGACACCATTGAATGGCTTGAAGATTATCTCAATCAGCAAGATGTGCCAATGGTTATCATATCTCATGACCGAGCTTTTCTCGATCAATTGTGTACAAAAATAGTGGAAACTGACATGGGTGTCTCCAGGACGTATGAGGGAAATTATTCTGAGTATTATATTGCAAAAGCAGCATGGATTGAAAGTCAAAACGCTGCTTGGGAGAAGCAGCAGAAGGAAATTGAGCACACAAAAGATTTGATACATAGGTTGGGCGCTGGAGCAAATTCTGGCCGTGCGTCTTCTGCTGGAAAGAAGCTGGAGAAACTTCAGGAAGAGGATCTTGTTGAAAGGCCATTTCAGAGGAAACAGATGAAGATCAGGTTTCCTGAACGGGGAAGAAGTGGAAGATTTGTTGCAACACTTAAGAATCTGGAAGCTGGCTTTGGGGATAAGGTTCTGTTTAGCAGAGCAAATCTCACAATTGAAAGAGGAGAGAAACTGGCCATTATCGGCCCAAATGGATGTGGCAAGAGTACTTTGCTGAAACTAATACTGGGTTTACAGAAGCCAGTAGCAGGTGAAGTTCTGCTTGGGGAGCATAATGTCCTACCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATTTAAATAAAACAGTGCTTGAGACAGTGGAAGAAGCAGCAGAGGATTGGAGACTTGATGATATAAAGGGTCTCCTTGGTCGTTGTAATTTCAAAGCAGATATGCTTGATAGAAAGGTTTCCCTCTTAAGTGGTGGTGAGAAGGCACGCCTTGCCTTCTGCAAGTTCATGGTAAAGCCATCTACTCTGCTAGTTCTGGATGAACCCACAAATCACTTGGACATTCCTTCAAAAGAGATGCTTGAGGAGGCAATAAATGAGTACAAAGGCACTGTTATCACAGTTTCTCATGACCGATACTTTATAAAGCAAATAGTTAATAGAGTAGTGGAGGTTAAAGACAGAAGACTGCAAGATTATGCAGGCAATTACAATTACTATCTAGAGAAGAATCTAGATGCAAGGGAAAGAGAGCTCGAGCGTGAGGCAGAGATTGAGGAGAAGGCTCCTAAAGTCAAAGCCAAATCAAAAATGTCTAAGGCTGAAAAGGAAGCTCGGAAGAAGCAAAAGATGCAGGCATTCCAGCAAGCAAAGGCAAAATCGAAAGGAATAAAGAACGCTAAGAGATGGAATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

716

Amino Acids

80.39

Weight (kDa)

8.23

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 137 - 312 2e-24 ABC transporter
ABC_tran_Xtn PF12848 351 - 438 3.8e-19 ABC transporter
ABC_tran PF00005 466 - 596 1.2e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09930
fragaria_vesca FvH4_1g22620
malus_domestica MD01G1020400.v1.1 MD01G1020500.v1.1 MD15G1331800.v1.1
prunus_persica Prupe.6G171800_v2.0.a1 Prupe.6G171800_v2.0.a1
pyrus_communis pycom15g29330
rosa_chinensis RchiOBHm_Chr1g0349811 RchiOBHm_Chr2g0116631 RchiOBHm_Chr2g0116661 RchiOBHm_Chr2g0116701 RchiOBHm_Chr2g0116721 RchiOBHm_Chr2g0116821 RchiOBHm_Chr2g0116831 RchiOBHm_Chr2g0137191 RchiOBHm_Chr4g0436571 RchiOBHm_Chr5g0033691 RchiOBHm_Chr5g0080211 RchiOBHm_Chr7g0224491
rosa_laevigata RLG00000001144 RLG00000001242 RLG00000008715 RLG00000011571 RLG00000013376 RLG00000018295 RLG00000018297 RLG00000018299 RLG00000018304 RLG00000018340 RLG00000019297
rosa_multiflora Rmu_co8219302.1_g000001 Rmu_co8228065.1_g000001 Rmu_co8391111.1_g000001 Rmu_sc0001896.1_g000033 Rmu_sc0003126.1_g000001 Rmu_sc0004191.1_g000001 Rmu_sc0004942.1_g000016 Rmu_sc0005450.1_g000015 Rmu_sc0010198.1_g000002 Rmu_sc0011574.1_g000003 Rmu_sc0020362.1_g000001 Rmu_sc0020362.1_g000002 Rmu_sc0026531.1_g000001
rosa_roxburghii Rroxscaffold_1G00010030 Rroxscaffold_1G00018300 Rroxscaffold_1G00021420 Rroxscaffold_2G00089320 Rroxscaffold_2G00126980 Rroxscaffold_2G00127000 Rroxscaffold_2G00144860 Rroxscaffold_6G00390340 Rroxscaffold_6G00390350 Rroxscaffold_6G00394730 Rroxscaffold_6G00423750
rosa_rugosa Rorug01G0049700 Rorug01G0284700 Rorug02G0208300 Rorug02G0208400 Rorug02G0208500 Rorug02G0208600 Rorug06G0216100 Rorug06G0216200 Rorug06G0216300
rosa_samantha Rh1AG026000 Rh1AG205600 Rh1AG270100 Rh1CG024200 Rh1DG146900 Rh1DG206100 Rh2AG263300 Rh2AG263500 Rh2AG263700 Rh2AG264100 Rh2AG264200 Rh2AG264800 Rh2BG275100 Rh2BG275200 Rh2BG275300 Rh2BG275500 Rh2BG278500 Rh2CG297300 Rh2CG302200 Rh2DG271500 Rh2DG271600 Rh2DG272100 Rh2DG290100 Rh2DG290200 Rh2DG290700 Rh3AG071300 Rh3CG072500 Rh5AG478400 Rh6AG079600 Rh6AG220800 Rh6BG131400 Rh6DG116900 Rh6DG391500 Rh7AG379600 Rh7CG399100 Rh7CG429600
rosa_wichuraiana Rw2G020730 Rw2G020760 Rw2G051970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1880
AarI CACCTGC 1 cut(s) 1496
AasI GACNNNNNNGTC 1 cut(s) 1067
Acc36I ACCTGC 1 cut(s) 1496
AccB7I CCANNNNNTGG 1 cut(s) 960
AccBSI CCGCTC 2 cut(s) 39, 105
AciI CCGC 8 cut(s) 25, 37, 60, 76, 92, 103, 126, 251
AclWI GGATC 1 cut(s) 1275
AcoI YGGCCR 4 cut(s) 225, 243, 1219, 1431
AcsI RAATTY 4 cut(s) 328, 334, 578, 1213
AcuI CTGAAG 3 cut(s) 725, 881, 1241
AfaI GTAC 3 cut(s) 1042, 1465, 1838
AfiI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
AflII CTTAAG 2 cut(s) 1352, 1702
AhdI GACNNNNNGTC 1 cut(s) 268
AjnI CCWGG 1 cut(s) 1073
AjuI GAANNNNNNNTTGG 6 cut(s) 437, 469, 1356, 1388, 1503, 1535
Alw21I GWGCWC 2 cut(s) 1176, 1992
Alw26I GTCTC 4 cut(s) 1075, 1592, 1621, 1652
AlwI GGATC 1 cut(s) 1275
Ama87I CYCGRG 1 cut(s) 1991
AoxI GGCC 7 cut(s) 219, 225, 243, 1219, 1280, 1431, 1441
ApeKI GCWGC 5 cut(s) 214, 1118, 1142, 1156, 1613
ApoI RAATTY 4 cut(s) 328, 334, 578, 1213
Asp700I GAANNNNTTC 2 cut(s) 1093, 1693
AspLEI GCGC 3 cut(s) 754, 820, 1205
AspS9I GGNCC 2 cut(s) 901, 1442
AsuC2I CCSGG 2 cut(s) 292, 349
AsuHPI GGTGA 4 cut(s) 475, 929, 1520, 1724
AsuII TTCGAA 1 cut(s) 332
AvaI CYCGRG 1 cut(s) 1991
AvaII GGWCC 1 cut(s) 901
BaeI ACNNNNGTAYC 2 cut(s) 1181, 1214
BalI TGGCCA 2 cut(s) 245, 1433
BanII GRGCYC 1 cut(s) 1992
BbsI GAAGAC 3 cut(s) 485, 1221, 1927
Bbv12I GWGCWC 2 cut(s) 1176, 1992
BbvCI CCTCAGC 1 cut(s) 1566
BbvI GCAGC 5 cut(s) 201, 1129, 1130, 1168, 1625
BccI CCATC 6 cut(s) 164, 634, 703, 821, 1762, 2136
BceAI ACGGC 3 cut(s) 212, 264, 1206
BciT130I CCWGG 1 cut(s) 1075
BcnI CCSGG 2 cut(s) 292, 349
BcoDI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BfaI CTAG 3 cut(s) 1766, 1958, 1970
BfoI RGCGCY 1 cut(s) 1206
BfrI CTTAAG 2 cut(s) 1352, 1702
BfuAI ACCTGC 1 cut(s) 1496
BisI GCNGC 6 cut(s) 126, 215, 1119, 1143, 1157, 1614
BlsI GCNGC 6 cut(s) 127, 216, 1120, 1144, 1158, 1615
BmcAI AGTACT 1 cut(s) 1465
Bme1390I CCNGG 3 cut(s) 292, 349, 1075
Bme18I GGWCC 1 cut(s) 901
BmeRI GACNNNNNGTC 1 cut(s) 268
BmeT110I CYCGRG 1 cut(s) 1991
BmgT120I GGNCC 2 cut(s) 901, 1442
BmiI GGNNCC 3 cut(s) 58, 903, 2022
BmrFI CCNGG 3 cut(s) 292, 349, 1075
BmrI ACTGGG 4 cut(s) 186, 219, 306, 1493
BmsI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
BmuI ACTGGG 4 cut(s) 186, 219, 306, 1493
BpiI GAAGAC 3 cut(s) 485, 1221, 1927
BplI GAGNNNNNCTC 4 cut(s) 1011, 1043, 1389, 1421
BpmI CTGGAG 4 cut(s) 680, 1057, 1227, 1268
Bpu10I CCTNAGC 1 cut(s) 1566
Bpu14I TTCGAA 1 cut(s) 332
BpuEI CTTGAG 3 cut(s) 787, 1616, 1838
BpuMI CCSGG 2 cut(s) 292, 349
BsaBI GATNNNNATC 1 cut(s) 1304
BsaI GGTCTC 1 cut(s) 1652
BsaJI CCNNGG 3 cut(s) 222, 246, 1651
BsaWI WCCGGW 2 cut(s) 238, 517
BsaXI ACNNNNNCTCC 4 cut(s) 23, 53, 137, 167
Bsc4I CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
Bse118I RCCGGY 2 cut(s) 53, 217
Bse1I ACTGG 6 cut(s) 192, 214, 301, 1434, 1488, 1499
Bse8I GATNNNNATC 1 cut(s) 1304
BseBI CCWGG 1 cut(s) 1075
BseDI CCNNGG 3 cut(s) 222, 246, 1651
BseGI GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BseJI GATNNNNATC 1 cut(s) 1304
BseLI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
BseMII CTCAG 2 cut(s) 1089, 1557
BseNI ACTGG 6 cut(s) 192, 214, 301, 1434, 1488, 1499
BseRI GAGGAG 6 cut(s) 269, 626, 650, 1434, 1835, 2027
BseXI GCAGC 5 cut(s) 201, 1129, 1130, 1168, 1625
BsgI GTGCAG 1 cut(s) 689
BshFI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BsiHKAI GWGCWC 2 cut(s) 1176, 1992
BsiHKCI CYCGRG 1 cut(s) 1991
BsiSI CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
BsmAI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BsmFI GGGAC 1 cut(s) 307
BsmI GAATGC 1 cut(s) 2093
BsnI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
Bso31I GGTCTC 1 cut(s) 1652
BsoBI CYCGRG 1 cut(s) 1991
Bsp119I TTCGAA 1 cut(s) 332
Bsp1286I GDGCHC 2 cut(s) 1176, 1992
Bsp1407I TGTACA 1 cut(s) 1040
Bsp143I GATC 3 cut(s) 1030, 1267, 1305
BspACI CCGC 8 cut(s) 25, 37, 60, 76, 92, 103, 126, 251
BspANI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BspCNI CTCAG 2 cut(s) 1090, 1558
BspHI TCATGA 2 cut(s) 1012, 1864
BspLI GGNNCC 3 cut(s) 58, 903, 2022
BspMI ACCTGC 1 cut(s) 1496
BspPI GGATC 1 cut(s) 1275
BspT104I TTCGAA 1 cut(s) 332
BspTI CTTAAG 2 cut(s) 1352, 1702
BspTNI GGTCTC 1 cut(s) 1652
BsrBI CCGCTC 2 cut(s) 39, 105
BsrFI RCCGGY 2 cut(s) 53, 217
BsrGI TGTACA 1 cut(s) 1040
BsrI ACTGG 6 cut(s) 192, 214, 301, 1434, 1488, 1499
BssAI RCCGGY 2 cut(s) 53, 217
BssECI CCNNGG 3 cut(s) 222, 246, 1651
BssMI GATC 3 cut(s) 1030, 1267, 1305
BssT1I CCWWGG 2 cut(s) 222, 1651
Bst2UI CCWGG 1 cut(s) 1075
Bst4CI ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
Bst6I CTCTTC 1 cut(s) 1257
BstAFI CTTAAG 2 cut(s) 1352, 1702
BstAPI GCANNNNNTGC 3 cut(s) 991, 1727, 2086
BstAUI TGTACA 1 cut(s) 1040
BstBI TTCGAA 1 cut(s) 332
BstC8I GCNNGC 7 cut(s) 55, 219, 1369, 1723, 1939, 2091, 2103
BstDEI CTNAG 4 cut(s) 1098, 1566, 2052, 2136
BstDSI CCRYGG 1 cut(s) 246
BstF5I GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BstH2I RGCGCY 1 cut(s) 1206
BstHHI GCGC 3 cut(s) 754, 820, 1205
BstKTI GATC 3 cut(s) 1033, 1270, 1308
BstMAI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BstMBI GATC 3 cut(s) 1030, 1267, 1305
BstMWI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
BstNI CCWGG 1 cut(s) 1075
BstSCI CCNGG 3 cut(s) 290, 347, 1073
BstV1I GCAGC 5 cut(s) 201, 1129, 1130, 1168, 1625
BstV2I GAAGAC 3 cut(s) 485, 1221, 1927
BstX2I RGATCY 1 cut(s) 1267
BstYI RGATCY 1 cut(s) 1267
BsuRI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BtgI CCRYGG 1 cut(s) 246
BtsCI GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BtsIMutI CAGTG 4 cut(s) 609, 1596, 1608, 1845
BveI ACCTGC 1 cut(s) 1496
Cac8I GCNNGC 7 cut(s) 55, 219, 1369, 1723, 1939, 2091, 2103
CciI TCATGA 2 cut(s) 1012, 1864
CfoI GCGC 3 cut(s) 754, 820, 1205
Cfr10I RCCGGY 2 cut(s) 53, 217
Cfr13I GGNCC 2 cut(s) 901, 1442
CseI GACGC 1 cut(s) 1215
Csp6I GTAC 3 cut(s) 1041, 1464, 1837
CspCI CAANNNNNGTGG 2 cut(s) 1032, 1067
CviAII CATG 5 cut(s) 1013, 1063, 1122, 1744, 1865
CviQI GTAC 3 cut(s) 1041, 1464, 1837
DdeI CTNAG 4 cut(s) 1098, 1566, 2052, 2136
DpnI GATC 3 cut(s) 1032, 1269, 1307
DpnII GATC 3 cut(s) 1030, 1267, 1305
DraI TTTAAA 1 cut(s) 1581
DrdI GACNNNNNNGTC 1 cut(s) 1067
DriI GACNNNNNGTC 1 cut(s) 268
DseDI GACNNNNNNGTC 1 cut(s) 1067
EaeI YGGCCR 4 cut(s) 225, 243, 1219, 1431
Eam1104I CTCTTC 1 cut(s) 1257
Eam1105I GACNNNNNGTC 1 cut(s) 268
EarI CTCTTC 1 cut(s) 1257
EciI GGCGGA 2 cut(s) 49, 266
Ecl136II GAGCTC 1 cut(s) 1990
Eco130I CCWWGG 2 cut(s) 222, 1651
Eco24I GRGCYC 1 cut(s) 1992
Eco31I GGTCTC 1 cut(s) 1652
Eco47I GGWCC 1 cut(s) 901
Eco53kI GAGCTC 1 cut(s) 1990
Eco57I CTGAAG 3 cut(s) 725, 881, 1241
Eco88I CYCGRG 1 cut(s) 1991
EcoICRI GAGCTC 1 cut(s) 1990
EcoO109I RGGNCCY 1 cut(s) 901
EcoRI GAATTC 3 cut(s) 328, 334, 578
EcoRII CCWGG 1 cut(s) 1073
EcoT14I CCWWGG 2 cut(s) 222, 1651
EcoT38I GRGCYC 1 cut(s) 1992
ErhI CCWWGG 2 cut(s) 222, 1651
FaeI CATG 5 cut(s) 1016, 1066, 1125, 1747, 1868
FalI AAGNNNNNCTT 6 cut(s) 1254, 1286, 1503, 1535, 1800, 1832
FaqI GGGAC 1 cut(s) 307
FatI CATG 5 cut(s) 1012, 1062, 1121, 1743, 1864
FauI CCCGC 2 cut(s) 83, 99
Fnu4HI GCNGC 6 cut(s) 126, 215, 1119, 1143, 1157, 1614
FokI GGATG 8 cut(s) 428, 737, 791, 839, 886, 935, 1464, 1787
FriOI GRGCYC 1 cut(s) 1992
Fsp4HI GCNGC 6 cut(s) 126, 215, 1119, 1143, 1157, 1614
FspBI CTAG 3 cut(s) 1766, 1958, 1970
GlaI GCGC 3 cut(s) 753, 819, 1204
GluI GCNGC 6 cut(s) 126, 215, 1119, 1143, 1157, 1614
GsuI CTGGAG 4 cut(s) 680, 1057, 1227, 1268
HaeII RGCGCY 1 cut(s) 1206
HaeIII GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
HapII CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
HgaI GACGC 1 cut(s) 1215
HhaI GCGC 3 cut(s) 754, 820, 1205
Hin1II CATG 5 cut(s) 1016, 1066, 1125, 1747, 1868
Hin6I GCGC 3 cut(s) 752, 818, 1203
HinP1I GCGC 3 cut(s) 752, 818, 1203
HindIII AAGCTT 2 cut(s) 368, 737
HinfI GANTC 9 cut(s) 71, 120, 269, 287, 521, 571, 745, 1357, 1966
HpaII CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
HphI GGTGA 4 cut(s) 475, 929, 1520, 1724
Hpy166II GTNNAC 3 cut(s) 314, 1041, 1490
Hpy188I TCNGA 5 cut(s) 283, 744, 1099, 1290, 2073
Hpy8I GTNNAC 3 cut(s) 314, 1041, 1490
Hpy99I CGWCG 1 cut(s) 233
HpyCH4III ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
HpyCH4IV ACGT 3 cut(s) 310, 316, 1079
HpyCH4V TGCA 8 cut(s) 670, 1112, 1346, 1737, 1927, 1937, 1976, 2089
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
HpyF3I CTNAG 4 cut(s) 1098, 1566, 2052, 2136
HpySE526I ACGT 3 cut(s) 310, 316, 1079
Hsp92II CATG 5 cut(s) 1016, 1066, 1125, 1747, 1868
HspAI GCGC 3 cut(s) 752, 818, 1203
KroI GCCGGC 2 cut(s) 53, 217
KroNI GCCGGC 2 cut(s) 55, 219
Kzo9I GATC 3 cut(s) 1030, 1267, 1305
LmnI GCTCC 7 cut(s) 24, 44, 62, 110, 1208, 1525, 2026
Lsp1109I GCAGC 5 cut(s) 201, 1129, 1130, 1168, 1625
LweI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
MaeI CTAG 3 cut(s) 1766, 1958, 1970
MaeII ACGT 3 cut(s) 310, 316, 1079
MaeIII GTNAC 4 cut(s) 400, 418, 761, 876
MalI GATC 3 cut(s) 1032, 1269, 1307
MbiI CCGCTC 2 cut(s) 39, 105
MboI GATC 3 cut(s) 1030, 1267, 1305
MfeI CAATTG 2 cut(s) 1034, 1410
MflI RGATCY 1 cut(s) 1267
MhlI GDGCHC 2 cut(s) 1176, 1992
MlsI TGGCCA 2 cut(s) 245, 1433
MluNI TGGCCA 2 cut(s) 245, 1433
MlyI GAGTC 3 cut(s) 65, 278, 580
MmeI TCCRAC 4 cut(s) 174, 430, 660, 702
Mox20I TGGCCA 2 cut(s) 245, 1433
MroNI GCCGGC 2 cut(s) 53, 217
MroXI GAANNNNTTC 2 cut(s) 1093, 1693
MscI TGGCCA 2 cut(s) 245, 1433
MseI TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2149
Msp20I TGGCCA 2 cut(s) 245, 1433
MspCI CTTAAG 2 cut(s) 1352, 1702
MspI CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
MspR9I CCNGG 3 cut(s) 292, 349, 1075
MunI CAATTG 2 cut(s) 1034, 1410
Mva1269I GAATGC 1 cut(s) 2093
MvaI CCWGG 1 cut(s) 1075
MwoI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
NaeI GCCGGC 2 cut(s) 55, 219
NciI CCSGG 2 cut(s) 292, 349
NdeII GATC 3 cut(s) 1030, 1267, 1305
NgoMIV GCCGGC 2 cut(s) 53, 217
NlaIII CATG 5 cut(s) 1016, 1066, 1125, 1747, 1868
NlaIV GGNNCC 3 cut(s) 58, 903, 2022
NmuCI GTSAC 4 cut(s) 400, 418, 761, 876
NspV TTCGAA 1 cut(s) 332
PaeR7I CTCGAG 1 cut(s) 1991
PagI TCATGA 2 cut(s) 1012, 1864
PaqCI CACCTGC 1 cut(s) 1496
PctI GAATGC 1 cut(s) 2093
PdiI GCCGGC 2 cut(s) 55, 219
PdmI GAANNNNTTC 2 cut(s) 1093, 1693
PfeI GAWTC 6 cut(s) 120, 287, 521, 745, 1357, 1966
PflMI CCANNNNNTGG 1 cut(s) 960
PfoI TCCNGGA 3 cut(s) 290, 347, 1073
PkrI GCNGC 6 cut(s) 127, 216, 1120, 1144, 1158, 1615
PleI GAGTC 3 cut(s) 65, 277, 579
PpsI GAGTC 3 cut(s) 65, 277, 579
PpuMI RGGWCCY 1 cut(s) 901
PsiI TTATAA 1 cut(s) 1880
Psp124BI GAGCTC 1 cut(s) 1992
Psp5II RGGWCCY 1 cut(s) 901
Psp6I CCWGG 1 cut(s) 1073
PspGI CCWGG 1 cut(s) 1073
PspN4I GGNNCC 3 cut(s) 58, 903, 2022
PspPI GGNCC 2 cut(s) 901, 1442
PspPPI RGGWCCY 1 cut(s) 901
PspXI VCTCGAGB 1 cut(s) 1991
PsuI RGATCY 1 cut(s) 1267
RsaI GTAC 3 cut(s) 1042, 1465, 1838
RsaNI GTAC 3 cut(s) 1041, 1464, 1837
SacI GAGCTC 1 cut(s) 1992
SaqAI TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2149
SatI GCNGC 6 cut(s) 126, 215, 1119, 1143, 1157, 1614
Sau3AI GATC 3 cut(s) 1030, 1267, 1305
Sau96I GGNCC 2 cut(s) 901, 1442
ScaI AGTACT 1 cut(s) 1465
SchI GAGTC 3 cut(s) 65, 278, 580
ScrFI CCNGG 3 cut(s) 292, 349, 1075
SduI GDGCHC 2 cut(s) 1176, 1992
SfaNI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
Sfr274I CTCGAG 1 cut(s) 1991
SfuI TTCGAA 1 cut(s) 332
SinI GGWCC 1 cut(s) 901
SlaI CTCGAG 1 cut(s) 1991
SmiI ATTTAAAT 1 cut(s) 1581
SmlI CTYRAG 6 cut(s) 766, 1352, 1595, 1702, 1817, 1991
SmoI CTYRAG 6 cut(s) 766, 1352, 1595, 1702, 1817, 1991
SsiI CCGC 8 cut(s) 25, 37, 60, 76, 92, 103, 126, 251
SspMI CTAG 3 cut(s) 1766, 1958, 1970
SstI GAGCTC 1 cut(s) 1992
StyD4I CCNGG 3 cut(s) 290, 347, 1073
StyI CCWWGG 2 cut(s) 222, 1651
SwaI ATTTAAAT 1 cut(s) 1581
TaaI ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
TaiI ACGT 3 cut(s) 313, 319, 1082
TaqI TCGA 8 cut(s) 69, 231, 332, 548, 582, 1029, 1992, 2117
TaqII GACCGA 2 cut(s) 1032, 1884
TatI WGTACW 3 cut(s) 1040, 1463, 1836
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 6 cut(s) 120, 287, 521, 745, 1357, 1966
Tru1I TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2149
Tru9I TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2149
TscAI CASTG 4 cut(s) 609, 1596, 1608, 1852
TseFI GTSAC 4 cut(s) 400, 418, 761, 876
TseI GCWGC 5 cut(s) 214, 1118, 1142, 1156, 1613
Tsp45I GTSAC 4 cut(s) 400, 418, 761, 876
TspDTI ATGAA 4 cut(s) 569, 1316, 1732, 1791
TspRI CASTG 4 cut(s) 609, 1596, 1608, 1852
Van91I CCANNNNNTGG 1 cut(s) 960
Vha464I CTTAAG 2 cut(s) 1352, 1702
VpaK11BI GGWCC 1 cut(s) 901
XapI RAATTY 4 cut(s) 328, 334, 578, 1213
XbaI TCTAGA 2 cut(s) 1957, 1969
XcmI CCANNNNNNNNNTGG 2 cut(s) 206, 1789
XhoI CTCGAG 1 cut(s) 1991
XmnI GAANNNNTTC 2 cut(s) 1093, 1693
XspI CTAG 3 cut(s) 1766, 1958, 1970
ZrmI AGTACT 1 cut(s) 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.