Rorug01G0284700

Outer envelope pore protein 37

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
39908694 .. 39910746
2053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0284700.1

Sequence Viewer

Length: 1983 bp
ATGCAATTGAACCATCCGAGACTCGAAGGGAATGAGACGGATAAGCTGGCACTGCTAGCAATCAGAGCTCAAATACAACACGATCCGAACCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGCGTCACCTGCAGTCGACGACATCGCCAAAGGGTCACGAAGCTGGAGCTGGGGTCTCTAGCGTTGGTGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTGCATCTCCTGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGACTGCAGGTATTGCTTTTAAACAATAACTCCCTTACTGGCACTATTCCTCCCAACATATCCAGTTGCTTCAAACTCATCACTCTCCGTCTTGATAGAAACAATCTAGTGGGTCAAATTCCTCCCAAACTCAGTTCCCTGTCAAAGCTTCAGCTTTTTTCTCTGCAATTCAACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTCTCGTCTCTCGAGAAATTTTCTGTAGCTATTAACAACTTAGAAGGAAGCATCCCTAGTTCTCTATGCCAGTTGAAAAGATTAAGAGGTATCTATTTCGAATCAAATAGGTTATCTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGGTATAGTTGATTTCGATATAGCATCAAACCAAATTAAAGGAAGTCTTCAATCAAACTTGAGCAATGCTTTTCCCAACCTTCAAATATTTTCCGTTGCCGAAAATCATTTTACTGGGGCCATCCCTTCCTCAATATCCAAGGCAACAAATCTTGTGGCGTTTCAGTGTCCGTCAAACAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCATAACCTTATGATATTCCGTGTCGGTGATAATAATCTTGGTAGCGGTAAACATGGTGACTTAAGTTTTGTCTCAGAATTGATCAATGCCACAGAGTTAAGAGTATTGGACTTCAGCTTCAACAATTTTGGAGGCACGTTGCCCACATCAATATCCAATCTCTCAACCAATCTCCAATGGATCTCGGTCAAGGAAAACCAATTACATGGAAGCATCCCAACTGGATTAGGGAATCTTGTCAACCTGCAACTCCTCGATATGAGTGTAAACTCCTTCACAGGTAGCATCTCCACAGACATTGGGCAGCTTTCAGGGCTTGGGGGGTTGTTTCTTCACAACAACCAATTATCAGGGATCATTCCATCTTCTCTTGGAAATTTAACATTGTTAACACTTCTCCAATTGCAGGAAAATAATCTAGAGGGTAGCATCCTGTCCAGCCTAGGGAAATGCCACTGGTTAATGGAATTGGGTCTTTCCGGAAACAATCTGAATGGCACGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAACAATTTTGGGATTGGATAGAAACCAATTGACTGGTTCCCTTCCCCTGGAGATTGGAAATTTGAAGAATCTAGGTCAACTGGACATTTCTAACAACTTGTTATCAGAAGAACTTCCCAGTAGCATCGGCAGCTGCCAGAGCTTAGAATACCTGCTCTTGCAAGGCAACTTCTTCTTGGGGGCCATTCCTTCATCTATGAAGGACTTGAGAGGGATTCGATATTTAGACCTTTCTCAAAATAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTGAACTTGGAGTACCTGAACCTATCCTTCAACCAGTTTTGGGGAACAGCAACAGTGGCCAAGGCCAAAGCGACACCACGTCAACCGAGGTTACGTTATGTATCGCCTCGCCACTCGCTCTCGCCTCCAGCGCCGATTACGCTACCAGGAATAGCGCCTACGTTCGCTCCACCGCGAGCATACGCGATACACAATGCAAAGTTCGGAAATAAAGGCGATAGAATACTGAATAGAGATACGTGCTCCAAAAGGCAAATTCATTACAAAGGGCTTTGCGGCCAATAG

Protein Analysis

660

Amino Acids

72.08

Weight (kDa)

9.19

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 12 - 51 4.7e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 71 - 208 1.9e-13 Leucine-rich repeat region
LRR_14 PF23598 477 - 576 6.2e-08 Leucine-rich repeat region
LRR_8 PF13855 521 - 579 4.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09930
fragaria_vesca FvH4_1g22620
malus_domestica MD01G1020400.v1.1 MD01G1020500.v1.1 MD15G1331800.v1.1
prunus_persica Prupe.6G171800_v2.0.a1 Prupe.6G171800_v2.0.a1
pyrus_communis pycom15g29330
rosa_chinensis RchiOBHm_Chr1g0349811 RchiOBHm_Chr2g0116631 RchiOBHm_Chr2g0116661 RchiOBHm_Chr2g0116701 RchiOBHm_Chr2g0116721 RchiOBHm_Chr2g0116821 RchiOBHm_Chr2g0116831 RchiOBHm_Chr2g0137191 RchiOBHm_Chr4g0436571 RchiOBHm_Chr5g0033691 RchiOBHm_Chr5g0080211 RchiOBHm_Chr7g0224491
rosa_laevigata RLG00000001144 RLG00000001242 RLG00000008715 RLG00000011571 RLG00000013376 RLG00000018295 RLG00000018297 RLG00000018299 RLG00000018304 RLG00000018340 RLG00000019297
rosa_multiflora Rmu_co8219302.1_g000001 Rmu_co8228065.1_g000001 Rmu_co8391111.1_g000001 Rmu_sc0001896.1_g000033 Rmu_sc0003126.1_g000001 Rmu_sc0004191.1_g000001 Rmu_sc0004942.1_g000016 Rmu_sc0005450.1_g000015 Rmu_sc0010198.1_g000002 Rmu_sc0011574.1_g000003 Rmu_sc0020362.1_g000001 Rmu_sc0020362.1_g000002 Rmu_sc0026531.1_g000001
rosa_roxburghii Rroxscaffold_1G00010030 Rroxscaffold_1G00018300 Rroxscaffold_1G00021420 Rroxscaffold_2G00089320 Rroxscaffold_2G00126980 Rroxscaffold_2G00127000 Rroxscaffold_2G00144860 Rroxscaffold_6G00390340 Rroxscaffold_6G00390350 Rroxscaffold_6G00394730 Rroxscaffold_6G00423750
rosa_rugosa Rorug01G0049700 Rorug01G0284700 Rorug02G0208300 Rorug02G0208400 Rorug02G0208500 Rorug02G0208600 Rorug06G0216100 Rorug06G0216200 Rorug06G0216300
rosa_samantha Rh1AG026000 Rh1AG205600 Rh1AG270100 Rh1CG024200 Rh1DG146900 Rh1DG206100 Rh2AG263300 Rh2AG263500 Rh2AG263700 Rh2AG264100 Rh2AG264200 Rh2AG264800 Rh2BG275100 Rh2BG275200 Rh2BG275300 Rh2BG275500 Rh2BG278500 Rh2CG297300 Rh2CG302200 Rh2DG271500 Rh2DG271600 Rh2DG272100 Rh2DG290100 Rh2DG290200 Rh2DG290700 Rh3AG071300 Rh3CG072500 Rh5AG478400 Rh6AG079600 Rh6AG220800 Rh6BG131400 Rh6DG116900 Rh6DG391500 Rh7AG379600 Rh7CG399100 Rh7CG429600
rosa_wichuraiana Rw2G020730 Rw2G020760 Rw2G051970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 155
Acc36I ACCTGC 4 cut(s) 155, 310, 1137, 1581
AccB1I GGYRCC 1 cut(s) 865
AccI GTMKAC 1 cut(s) 154
AccII CGCG 2 cut(s) 1873, 1883
AccIII TCCGGA 1 cut(s) 1364
AciI CCGC 4 cut(s) 930, 1391, 1871, 1974
AclWI GGATC 6 cut(s) 77, 204, 217, 496, 1073, 1247
AcoI YGGCCR 2 cut(s) 1755, 1975
AcsI RAATTY 6 cut(s) 429, 539, 871, 1261, 1480, 1953
AcuI CTGAAG 2 cut(s) 446, 982
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 1 cut(s) 1712
AfiI CCNNNNNNNGG 7 cut(s) 227, 299, 515, 1291, 1329, 1468, 1738
AflII CTTAAG 2 cut(s) 244, 946
AgsI TTSAA 9 cut(s) 10, 385, 484, 598, 722, 755, 1006, 1486, 1729
AhdI GACNNNNNGTC 1 cut(s) 1776
AjiI CACGTC 1 cut(s) 1778
AjnI CCWGG 2 cut(s) 1467, 1843
AjuI GAANNNNNNNTTGG 2 cut(s) 1688, 1720
Alw21I GWGCWC 2 cut(s) 70, 1943
Alw26I GTCTC 5 cut(s) 13, 29, 198, 534, 961
AlwI GGATC 6 cut(s) 77, 204, 217, 496, 1073, 1247
Ama87I CYCGRG 1 cut(s) 533
Aor13HI TCCGGA 1 cut(s) 1364
AoxI GGCC 6 cut(s) 789, 1405, 1602, 1755, 1761, 1975
ApeKI GCWGC 4 cut(s) 253, 1189, 1551, 1554
ApoI RAATTY 6 cut(s) 429, 539, 871, 1261, 1480, 1953
ArsI GACNNNNNNTTYG 2 cut(s) 935, 967
Asp700I GAANNNNTTC 2 cut(s) 117, 1533
AspA2I CCTAGG 1 cut(s) 1327
AspLEI GCGC 2 cut(s) 1831, 1855
AspS9I GGNCC 2 cut(s) 789, 1602
AsuC2I CCSGG 1 cut(s) 92
AsuHPI GGTGA 3 cut(s) 136, 923, 953
AsuII TTCGAA 1 cut(s) 621
AsuNHI GCTAGC 1 cut(s) 55
AvaI CYCGRG 1 cut(s) 533
AvrII CCTAGG 1 cut(s) 1327
BalI TGGCCA 1 cut(s) 1757
BamHI GGATCC 1 cut(s) 209
BanI GGYRCC 1 cut(s) 865
BanII GRGCYC 1 cut(s) 70
BarI GAAGNNNNNNTAC 2 cut(s) 634, 666
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 2 cut(s) 70, 1943
BbvI GCAGC 4 cut(s) 240, 1201, 1541, 1563
BccI CCATC 3 cut(s) 21, 800, 1255
BceAI ACGGC 1 cut(s) 154
BciT130I CCWGG 2 cut(s) 1469, 1845
BclI TGATCA 1 cut(s) 966
BcnI CCSGG 1 cut(s) 92
BcoDI GTCTC 5 cut(s) 13, 29, 198, 534, 961
BfaI CTAG 7 cut(s) 56, 197, 419, 579, 1304, 1328, 1493
BfmI CTRYAG 3 cut(s) 148, 317, 546
BfoI RGCGCY 2 cut(s) 1832, 1856
BfrI CTTAAG 2 cut(s) 244, 946
BfuAI ACCTGC 4 cut(s) 155, 310, 1137, 1581
BisI GCNGC 5 cut(s) 254, 1190, 1552, 1555, 1975
BlnI CCTAGG 1 cut(s) 1327
BlsI GCNGC 5 cut(s) 255, 1191, 1553, 1556, 1976
Bme1390I CCNGG 3 cut(s) 92, 1469, 1845
BmeRI GACNNNNNGTC 1 cut(s) 1776
BmeT110I CYCGRG 1 cut(s) 533
BmgBI CACGTC 1 cut(s) 1778
BmgT120I GGNCC 2 cut(s) 789, 1602
BmiI GGNNCC 6 cut(s) 211, 521, 790, 867, 1459, 1603
BmrFI CCNGG 3 cut(s) 92, 1469, 1845
BmrI ACTGGG 2 cut(s) 795, 1533
BmsI GCATC 7 cut(s) 265, 582, 704, 1107, 1179, 1323, 1554
BmtI GCTAGC 1 cut(s) 59
BmuI ACTGGG 2 cut(s) 795, 1533
BpiI GAAGAC 1 cut(s) 710
BpmI CTGGAG 3 cut(s) 203, 1490, 1809
Bpu14I TTCGAA 1 cut(s) 621
BpuEI CTTGAG 3 cut(s) 751, 1648, 1712
BpuMI CCSGG 1 cut(s) 92
BsaAI YACGTR 1 cut(s) 1938
BsaBI GATNNNNATC 2 cut(s) 214, 918
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 5 cut(s) 810, 1327, 1467, 1758, 1784
BsaWI WCCGGW 1 cut(s) 1364
BsaXI ACNNNNNCTCC 8 cut(s) 176, 206, 326, 346, 356, 376, 1849, 1879
Bsc4I CCNNNNNNNGG 7 cut(s) 227, 299, 515, 1291, 1329, 1468, 1738
Bse3DI GCAATG 1 cut(s) 742
Bse8I GATNNNNATC 2 cut(s) 214, 918
BseAI TCCGGA 1 cut(s) 1364
BseBI CCWGG 2 cut(s) 1469, 1845
BseDI CCNNGG 5 cut(s) 810, 1327, 1467, 1758, 1784
BseGI GGATG 6 cut(s) 13, 573, 645, 792, 1098, 1314
BseJI GATNNNNATC 2 cut(s) 214, 918
BseLI CCNNNNNNNGG 7 cut(s) 227, 299, 515, 1291, 1329, 1468, 1738
BseMI GCAATG 1 cut(s) 742
BseMII CTCAG 2 cut(s) 457, 972
BseRI GAGGAG 2 cut(s) 282, 1127
BseXI GCAGC 4 cut(s) 240, 1201, 1541, 1563
BseYI CCCAGC 1 cut(s) 187
Bsh1236I CGCG 2 cut(s) 1873, 1883
BshFI GGCC 6 cut(s) 791, 1407, 1604, 1757, 1763, 1977
BshNI GGYRCC 1 cut(s) 865
BsiHKAI GWGCWC 2 cut(s) 70, 1943
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 2 cut(s) 91, 1365
BslI CCNNNNNNNGG 7 cut(s) 227, 299, 515, 1291, 1329, 1468, 1738
BsmAI GTCTC 5 cut(s) 13, 29, 198, 534, 961
BsmBI CGTCTC 2 cut(s) 29, 534
BsnI GGCC 6 cut(s) 791, 1407, 1604, 1757, 1763, 1977
Bso31I GGTCTC 1 cut(s) 198
BsoBI CYCGRG 1 cut(s) 533
Bsp119I TTCGAA 1 cut(s) 621
Bsp1286I GDGCHC 2 cut(s) 70, 1943
Bsp13I TCCGGA 1 cut(s) 1364
Bsp143I GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
BspACI CCGC 4 cut(s) 930, 1391, 1871, 1974
BspANI GGCC 6 cut(s) 791, 1407, 1604, 1757, 1763, 1977
BspCNI CTCAG 2 cut(s) 456, 971
BspEI TCCGGA 1 cut(s) 1364
BspFNI CGCG 2 cut(s) 1873, 1883
BspLI GGNNCC 6 cut(s) 211, 521, 790, 867, 1459, 1603
BspMAI CTGCAG 2 cut(s) 152, 321
BspMI ACCTGC 4 cut(s) 155, 310, 1137, 1581
BspOI GCTAGC 1 cut(s) 59
BspPI GGATC 6 cut(s) 77, 204, 217, 496, 1073, 1247
BspT104I TTCGAA 1 cut(s) 621
BspT107I GGYRCC 1 cut(s) 865
BspTI CTTAAG 2 cut(s) 244, 946
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 742
BssECI CCNNGG 5 cut(s) 810, 1327, 1467, 1758, 1784
BssMI GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 3 cut(s) 810, 1327, 1758
Bst2UI CCWGG 2 cut(s) 1469, 1845
Bst4CI ACNGT 1 cut(s) 1753
BstACI GRCGYC 1 cut(s) 141
BstAFI CTTAAG 2 cut(s) 244, 946
BstAPI GCANNNNNTGC 2 cut(s) 316, 325
BstBAI YACGTR 1 cut(s) 1938
BstBI TTCGAA 1 cut(s) 621
BstC8I GCNNGC 3 cut(s) 48, 57, 1875
BstDEI CTNAG 5 cut(s) 236, 443, 562, 958, 1564
BstF5I GGATG 6 cut(s) 13, 573, 645, 792, 1098, 1314
BstFNI CGCG 2 cut(s) 1873, 1883
BstH2I RGCGCY 2 cut(s) 1832, 1856
BstHHI GCGC 2 cut(s) 1831, 1855
BstKTI GATC 6 cut(s) 85, 212, 504, 969, 1068, 1242
BstMAI GTCTC 5 cut(s) 13, 29, 198, 534, 961
BstMBI GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
BstNI CCWGG 2 cut(s) 1469, 1845
BstSCI CCNGG 3 cut(s) 90, 1467, 1843
BstSFI CTRYAG 3 cut(s) 148, 317, 546
BstUI CGCG 2 cut(s) 1873, 1883
BstV1I GCAGC 4 cut(s) 240, 1201, 1541, 1563
BstV2I GAAGAC 1 cut(s) 710
BstX2I RGATCY 3 cut(s) 209, 501, 1065
BstXI CCANNNNNNTGG 3 cut(s) 1091, 1403, 1454
BstYI RGATCY 3 cut(s) 209, 501, 1065
BsuRI GGCC 6 cut(s) 791, 1407, 1604, 1757, 1763, 1977
BtgZI GCGATG 1 cut(s) 146
BtrI CACGTC 1 cut(s) 1778
BtsCI GGATG 6 cut(s) 13, 573, 645, 792, 1098, 1314
BtsI GCAGTG 1 cut(s) 50
BtsIMutI CAGTG 4 cut(s) 50, 842, 1339, 1758
BveI ACCTGC 4 cut(s) 155, 310, 1137, 1581
Cac8I GCNNGC 3 cut(s) 48, 57, 1875
CfoI GCGC 2 cut(s) 1831, 1855
Cfr13I GGNCC 2 cut(s) 789, 1602
CseI GACGC 1 cut(s) 130
Csp6I GTAC 1 cut(s) 1711
CspCI CAANNNNNGTGG 4 cut(s) 807, 842, 1165, 1200
CviAII CATG 3 cut(s) 105, 938, 1091
CviQI GTAC 1 cut(s) 1711
DdeI CTNAG 5 cut(s) 236, 443, 562, 958, 1564
DpnI GATC 6 cut(s) 84, 211, 503, 968, 1067, 1241
DpnII GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
DraI TTTAAA 1 cut(s) 333
DriI GACNNNNNGTC 1 cut(s) 1776
EaeI YGGCCR 2 cut(s) 1755, 1975
Eam1105I GACNNNNNGTC 1 cut(s) 1776
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 3 cut(s) 810, 1327, 1758
Eco24I GRGCYC 1 cut(s) 70
Eco31I GGTCTC 1 cut(s) 198
Eco53kI GAGCTC 1 cut(s) 68
Eco57I CTGAAG 2 cut(s) 446, 982
Eco88I CYCGRG 1 cut(s) 533
EcoICRI GAGCTC 1 cut(s) 68
EcoRII CCWGG 2 cut(s) 1467, 1843
EcoT14I CCWWGG 3 cut(s) 810, 1327, 1758
EcoT38I GRGCYC 1 cut(s) 70
ErhI CCWWGG 3 cut(s) 810, 1327, 1758
Esp3I CGTCTC 2 cut(s) 29, 534
FaeI CATG 3 cut(s) 108, 941, 1094
FalI AAGNNNNNCTT 2 cut(s) 702, 734
FatI CATG 3 cut(s) 104, 937, 1090
FbaI TGATCA 1 cut(s) 966
FblI GTMKAC 1 cut(s) 154
Fnu4HI GCNGC 5 cut(s) 254, 1190, 1552, 1555, 1975
FokI GGATG 5 cut(s) 560, 632, 779, 1085, 1301
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 5 cut(s) 254, 1190, 1552, 1555, 1975
FspBI CTAG 7 cut(s) 56, 197, 419, 579, 1304, 1328, 1493
GlaI GCGC 2 cut(s) 1830, 1854
GluI GCNGC 5 cut(s) 254, 1190, 1552, 1555, 1975
GsaI CCCAGC 1 cut(s) 191
GsuI CTGGAG 3 cut(s) 203, 1490, 1809
HaeII RGCGCY 2 cut(s) 1832, 1856
HaeIII GGCC 6 cut(s) 791, 1407, 1604, 1757, 1763, 1977
HapII CCGG 2 cut(s) 91, 1365
HgaI GACGC 1 cut(s) 130
HhaI GCGC 2 cut(s) 1831, 1855
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 3 cut(s) 108, 941, 1094
Hin6I GCGC 2 cut(s) 1829, 1853
HinP1I GCGC 2 cut(s) 1829, 1853
HincII GTYRAC 5 cut(s) 155, 1126, 1275, 1499, 1781
HindII GTYRAC 5 cut(s) 155, 1126, 1275, 1499, 1781
HindIII AAGCTT 2 cut(s) 238, 458
HinfI GANTC 6 cut(s) 21, 623, 1117, 1489, 1636, 1696
HpaI GTTAAC 1 cut(s) 1275
HpaII CCGG 2 cut(s) 91, 1365
HphI GGTGA 3 cut(s) 136, 923, 953
Hpy166II GTNNAC 7 cut(s) 155, 935, 1126, 1153, 1275, 1499, 1781
Hpy188I TCNGA 8 cut(s) 18, 65, 87, 961, 1377, 1528, 1701, 1904
Hpy8I GTNNAC 7 cut(s) 155, 935, 1126, 1153, 1275, 1499, 1781
Hpy99I CGWCG 1 cut(s) 159
HpyCH4III ACNGT 1 cut(s) 1753
HpyCH4IV ACGT 5 cut(s) 1022, 1777, 1792, 1859, 1937
HpyF3I CTNAG 5 cut(s) 236, 443, 562, 958, 1564
HpySE526I ACGT 5 cut(s) 1022, 1777, 1792, 1859, 1937
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 3 cut(s) 108, 941, 1094
HspAI GCGC 2 cut(s) 1829, 1853
Kpn2I TCCGGA 1 cut(s) 1364
Ksp22I TGATCA 1 cut(s) 966
KspAI GTTAAC 1 cut(s) 1275
Kzo9I GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
LmnI GCTCC 3 cut(s) 184, 1870, 1946
Lsp1109I GCAGC 4 cut(s) 240, 1201, 1541, 1563
LweI GCATC 7 cut(s) 265, 582, 704, 1107, 1179, 1323, 1554
MaeI CTAG 7 cut(s) 56, 197, 419, 579, 1304, 1328, 1493
MaeII ACGT 5 cut(s) 1022, 1777, 1792, 1859, 1937
MaeIII GTNAC 5 cut(s) 94, 142, 172, 941, 1788
MalI GATC 6 cut(s) 84, 211, 503, 968, 1067, 1241
MboI GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
MboII GAAGA 7 cut(s) 710, 875, 1208, 1242, 1498, 1541, 1585
MfeI CAATTG 3 cut(s) 5, 1286, 1448
MflI RGATCY 3 cut(s) 209, 501, 1065
MhlI GDGCHC 2 cut(s) 70, 1943
MlsI TGGCCA 1 cut(s) 1757
MluNI TGGCCA 1 cut(s) 1757
MlyI GAGTC 1 cut(s) 15
Mox20I TGGCCA 1 cut(s) 1757
MroI TCCGGA 1 cut(s) 1364
MroXI GAANNNNTTC 2 cut(s) 117, 1533
MscI TGGCCA 1 cut(s) 1757
Msp20I TGGCCA 1 cut(s) 1757
MspA1I CMGCKG 1 cut(s) 1554
MspCI CTTAAG 2 cut(s) 244, 946
MspI CCGG 2 cut(s) 91, 1365
MspR9I CCNGG 3 cut(s) 92, 1469, 1845
MunI CAATTG 3 cut(s) 5, 1286, 1448
MvaI CCWGG 2 cut(s) 1469, 1845
MvnI CGCG 2 cut(s) 1873, 1883
NciI CCSGG 1 cut(s) 92
NdeII GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
NheI GCTAGC 1 cut(s) 55
NlaIII CATG 3 cut(s) 108, 941, 1094
NlaIV GGNNCC 6 cut(s) 211, 521, 790, 867, 1459, 1603
NmuCI GTSAC 4 cut(s) 94, 142, 172, 941
NspV TTCGAA 1 cut(s) 621
PaeR7I CTCGAG 1 cut(s) 533
PaqCI CACCTGC 1 cut(s) 155
PdmI GAANNNNTTC 2 cut(s) 117, 1533
PfeI GAWTC 5 cut(s) 623, 1117, 1489, 1636, 1696
PkrI GCNGC 5 cut(s) 255, 1191, 1553, 1556, 1976
PleI GAGTC 1 cut(s) 15
PpsI GAGTC 1 cut(s) 15
Ppu21I YACGTR 1 cut(s) 1938
Psp124BI GAGCTC 1 cut(s) 70
Psp6I CCWGG 2 cut(s) 1467, 1843
PspFI CCCAGC 1 cut(s) 187
PspGI CCWGG 2 cut(s) 1467, 1843
PspN4I GGNNCC 6 cut(s) 211, 521, 790, 867, 1459, 1603
PspPI GGNCC 2 cut(s) 789, 1602
PsrI GAACNNNNNNTAC 2 cut(s) 1694, 1726
PstI CTGCAG 2 cut(s) 152, 321
PsuI RGATCY 3 cut(s) 209, 501, 1065
PvuII CAGCTG 1 cut(s) 1554
RsaI GTAC 1 cut(s) 1712
RsaNI GTAC 1 cut(s) 1711
SacI GAGCTC 1 cut(s) 70
SalI GTCGAC 1 cut(s) 153
SatI GCNGC 5 cut(s) 254, 1190, 1552, 1555, 1975
Sau3AI GATC 6 cut(s) 82, 209, 501, 966, 1065, 1239
Sau96I GGNCC 2 cut(s) 789, 1602
SchI GAGTC 1 cut(s) 15
ScrFI CCNGG 3 cut(s) 92, 1469, 1845
SduI GDGCHC 2 cut(s) 70, 1943
SfaNI GCATC 7 cut(s) 265, 582, 704, 1107, 1179, 1323, 1554
SfcI CTRYAG 3 cut(s) 148, 317, 546
Sfr274I CTCGAG 1 cut(s) 533
SfuI TTCGAA 1 cut(s) 621
SlaI CTCGAG 1 cut(s) 533
SmlI CTYRAG 6 cut(s) 244, 533, 730, 946, 1627, 1691
SmoI CTYRAG 6 cut(s) 244, 533, 730, 946, 1627, 1691
SsiI CCGC 4 cut(s) 930, 1391, 1871, 1974
SspI AATATT 1 cut(s) 759
SspMI CTAG 7 cut(s) 56, 197, 419, 579, 1304, 1328, 1493
SstI GAGCTC 1 cut(s) 70
StyD4I CCNGG 3 cut(s) 90, 1467, 1843
StyI CCWWGG 3 cut(s) 810, 1327, 1758
TaaI ACNGT 1 cut(s) 1753
TaiI ACGT 5 cut(s) 1025, 1780, 1795, 1862, 1940
TaqI TCGA 7 cut(s) 24, 154, 534, 621, 687, 1140, 1639
TaqII GACCGA 1 cut(s) 1060
TauI GCSGC 1 cut(s) 1977
TfiI GAWTC 5 cut(s) 623, 1117, 1489, 1636, 1696
TscAI CASTG 4 cut(s) 57, 842, 1346, 1758
TseFI GTSAC 4 cut(s) 94, 142, 172, 941
TseI GCWGC 4 cut(s) 253, 1189, 1551, 1554
Tsp45I GTSAC 4 cut(s) 94, 142, 172, 941
TspDTI ATGAA 5 cut(s) 126, 875, 1602, 1634, 1946
TspGWI ACGGA 5 cut(s) 53, 389, 754, 831, 893
TspRI CASTG 4 cut(s) 57, 842, 1346, 1758
Vha464I CTTAAG 2 cut(s) 244, 946
XapI RAATTY 6 cut(s) 429, 539, 871, 1261, 1480, 1953
XbaI TCTAGA 1 cut(s) 1303
XhoI CTCGAG 1 cut(s) 533
XmaJI CCTAGG 1 cut(s) 1327
XmiI GTMKAC 1 cut(s) 154
XmnI GAANNNNTTC 2 cut(s) 117, 1533
XspI CTAG 7 cut(s) 56, 197, 419, 579, 1304, 1328, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.