Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

28341723 .. 28344758

Gene Structure 3036 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g32961.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGTCTTCTCATTCGACAGCTAAAACAGTACAAAGACTTGGGATCTTGTTTCCTCTGCTCATTATCTACTTGCTGTTCAATCTCTCATATGCGGTTAAAGCTCAAGATGAAAAAAGTGTCACCAACGTTGGAGCAATCATTGATGTTGATTCGCGTATCGGGAAACAACAGAAAGCTGCCATGGAAATTGCAGCTGAAAACTTCAACAACCAGTCAAAAACTGATGAGCTGATCCTTCATTTCCGAGATTCTGGCCGCGACCCCTTTCTTGCTGCATATGCTGCTGAACATTTGATAAAGGAAGAGAAGGTACAAGTGATAATTGGCATGGAGACTTGGCAGGAAGCTGTTACAGTAGCTGATGTAGTCAAAAACAAAAACCTATCTGATGATCAAGTTGTTCCAGTCATTTCCTTTGCAGCACCAACCATAACACCTCCGCTAATACAACACCTTTGGCCTTTCTTGATAAGAATGGGAAGCGATGTTGCTGCTCAGATGGCTTGCATTGGAGATATAGTGTCAGCATACTACTGGAAAAGGGTTGTTGTAGTATATGAAGACGATGGTTATGGTGGCGGCATTGGGAGGCTAGCTCTTTTATCCGAAACTCTAAGAGCTGTTGGTGCAAAGATTGAGCACCGTATAGTTCTCCCACGAATTTCTGAGTCTACTGATCCTTATTGGGATGAAGTAGAGAAGCAGTTTAAGCTTAGCAATGTACAGTCTCGGACATTCATAGTTCTTCAGTCATCTTTGCCAACTGTAACTGGTCTATTCAAAGTAGCTAAGAAGATGGGACTTGTGGGAGTAGATTCGGCTTGGATAATCACAGAAGGTATTGCTAGTTTGCTTGATCCTCAGGACAACCATGATATGGAAGGTACTCTCGGAATCAAGACTTATTATGACAGGAATACTACTACTTATGCCAGTTTCCAGAAAGAATTCCGAACAAAGTATTCAGATGAAGATAACTCTAAGCCAGGAATTTATGCTCTTCGCGCATATGATATTATTTCAATCATCACACAGGCCATAAGTAAAATGAATACTGAGACTACTAATACTAGTCTTCAAGAGTTATTAGCTGAAAGGTTGAGCAATAACTACAAGGGTTTAAGTGGGATCATGCAACTCAAAGGAGGTGAGGTACTGCTGGATTCTCCGAGATTTAGGATCATAAATATTGTGGATGGGAAGACGGATAAAGAACTAAACATCTGGACACCAGGGTTTGGATTCTCGAAAAGCCTTGTTAAAGTATCAGGTACATACAGAAGTAGTGATGATGTTGGTGATGTAACTTGGCCTGGGAACATAACACTACGTCCTTCCAAAGGCTGGGCAATGCCAACTGTTGAGAAGAAAATGAAAATTGCGATTCCGATTCAAAACAGTCCATTTATAACTGTCCTGGGGGAGAATCGATATGACGGTTTCTGCATTCAACTGTTCAATATGGTGGTAGGAAATTTGAGTCATTTATATTCCTTGCCACATGAATTTCATGAGTTCAATGGCAGCTTCAGTGATCTGATAGAACTAGTTAATGACAAGACTTATGATGCTATTGTTGGTGATATAACTGTACTTGTTGAACGAATTGACAAAGTGGAATTCACTCAACCATACCTGGAGTCTGGTTTGACAATGATAGTTCCAGATATATCTGCTGAGGAGGAAACATGGATGTTTATGAAACCTTTCACATGGCAAATGTGGTTGGTGACTGGTATCATCTTAATCTACACGACCTTAGTAGTATGGTTCCTTGAGGTGCCATCCAGTCCAGACTTAAAGGGCTCACTTAAGAGTCAGATTGCCTTTGCAACTTGGTTCACCTTCTCATCTTTGTTCTTTGCTCACAGAGAAAAGGTCTACAGCAACTTGACTCGAATAGTTTTCATAGTGTGGCTGTTTGTTGTATTGATCTTAAGCTCAAGCTACACTGCTAAGCTGTCTTCAATGCTTACCATCCAACGACTGAGCTCGAATGTAACAGACATTGAGATGCTGAGGAGAACCAACTCATTAGTTGGTTGCGATAACGATTCCTTTGTCAGGAATTACCTAGAGAATGTTCTTAATTTCAATCGAGATGCTATCAAGGTAATAGACAGCAGCTACAACCCGGAAGAGATCAGACAAAAAAATTTATCTGCTGTATTTCTTGAATTGCCATATGCGCAAGTTTTTATGGACAAGCACAAGGGCTACACTCTCACCCAACCCACCTACAATTTTGGAGGCTTTAGCTTTGTATTTCAGAGAGGCTCTCCAATAACTAGGGATTTCTCTAAGATCATTCTAGATCTACTGGAGAATGGAGAAATGAGAAATCTTCAGAATCACTGGTTGACTCCACACAACCGTCCAACCAATACAATTTCTGATATGCCGGAAAGCTTGAGCCTCAAGAGCTTTTGGGGTCTCTTTGTGATATCCGGGACAACTTCGACCTTCTGTTTTCTATTAGCTCTTACTATCTGGCTGAAGAAGTTATATCACCAAGAAGCATCCCAAGGCATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

845

Amino Acids

95.34

Weight (kDa)

5.74

Isoelectric Point (pI)

32.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	53 - 362	3.5e-19	Periplasmic binding protein
ANF_receptor	PF01094	57 - 397	3e-34	Receptor family ligand binding region
SBP_bac_3	PF00497	459 - 788	3.1e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	459 - 554	1.2e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	571 - 817	7e-28	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1409
Acc16I	TGCGCA	1 cut(s)	2190
AccB1I	GGYRCC	1 cut(s)	1780
AccB7I	CCANNNNNTGG	3 cut(s)	877, 1238, 1344
AccI	GTMKAC	2 cut(s)	671, 1881
AccII	CGCG	3 cut(s)	154, 258, 1005
AciI	CCGC	4 cut(s)	92, 256, 440, 579
AclI	AACGTT	1 cut(s)	126
AclWI	GGATC	6 cut(s)	50, 226, 671, 851, 1136, 1187
AcoI	YGGCCR	1 cut(s)	253
AcsI	RAATTY	7 cut(s)	660, 947, 990, 1474, 1505, 1619, 2155
AcuI	CTGAAG	4 cut(s)	731, 1513, 2330, 2516
AfaI	GTAC	7 cut(s)	30, 312, 723, 886, 1155, 1273, 1593
AfiI	CCNNNNNNNGG	5 cut(s)	877, 1238, 1340, 1344, 2064
AflII	CTTAAG	2 cut(s)	1811, 1936
AhlI	ACTAGT	2 cut(s)	1070, 1546
AjnI	CCWGG	5 cut(s)	985, 1231, 1312, 1416, 1635
Alw21I	GWGCWC	2 cut(s)	642, 1994
Alw26I	GTCTC	4 cut(s)	326, 732, 1052, 2438
AlwI	GGATC	6 cut(s)	50, 226, 671, 851, 1136, 1187
AlwNI	CAGNNNCTG	1 cut(s)	359
AoxI	GGCC	4 cut(s)	253, 458, 1035, 1310
ApeKI	GCWGC	8 cut(s)	176, 191, 272, 281, 419, 491, 1524, 2124
ApoI	RAATTY	7 cut(s)	660, 947, 990, 1474, 1505, 1619, 2155
Asp700I	GAANNNNTTC	2 cut(s)	947, 1706
AspLEI	GCGC	2 cut(s)	1007, 2191
AsuC2I	CCSGG	2 cut(s)	2135, 2449
AsuHPI	GGTGA	8 cut(s)	112, 1160, 1310, 1592, 1741, 1834, 2218, 2501
AsuNHI	GCTAGC	1 cut(s)	592
AxyI	CCTNAGG	1 cut(s)	861
BanI	GGYRCC	1 cut(s)	1780
BanII	GRGCYC	2 cut(s)	1808, 1994
BarI	GAAGNNNNNNTAC	2 cut(s)	294, 326
BbsI	GAAGAC	4 cut(s)	567, 1067, 1208, 1956
Bbv12I	GWGCWC	2 cut(s)	642, 1994
BbvCI	CCTCAGC	2 cut(s)	1677, 2018
BbvI	GCAGC	8 cut(s)	163, 203, 259, 268, 431, 478, 1536, 2136
BccI	CCATC	6 cut(s)	493, 560, 790, 1190, 1792, 1985
BcgI	CGANNNNNNTGC	2 cut(s)	473, 507
BciT130I	CCWGG	5 cut(s)	987, 1233, 1314, 1418, 1637
BclI	TGATCA	1 cut(s)	391
BcnI	CCSGG	2 cut(s)	2135, 2449
BcoDI	GTCTC	4 cut(s)	326, 732, 1052, 2438
BcuI	ACTAGT	2 cut(s)	1070, 1546
BfaI	CTAG	7 cut(s)	593, 846, 1071, 1547, 2075, 2289, 2312
BfmI	CTRYAG	1 cut(s)	1882
BfrI	CTTAAG	2 cut(s)	1811, 1936
BglII	AGATCT	1 cut(s)	2314
BlpI	GCTNAGC	2 cut(s)	713, 1956
Bme1390I	CCNGG	7 cut(s)	987, 1233, 1314, 1418, 1637, 2135, 2449
BmiI	GGNNCC	2 cut(s)	1772, 1782
BmrFI	CCNGG	7 cut(s)	987, 1233, 1314, 1418, 1637, 2135, 2449
BmsI	GCATC	4 cut(s)	1558, 2004, 2092, 2528
BmtI	GCTAGC	1 cut(s)	596
BpiI	GAAGAC	4 cut(s)	567, 1067, 1208, 1956
BplI	GAGNNNNNCTC	4 cut(s)	580, 612, 2263, 2295
BpmI	CTGGAG	2 cut(s)	1658, 2342
Bpu10I	CCTNAGC	2 cut(s)	1677, 2018
Bpu1102I	GCTNAGC	2 cut(s)	713, 1956
BpuEI	CTTGAG	5 cut(s)	87, 1796, 1927, 2402, 2431
BpuMI	CCSGG	2 cut(s)	2135, 2449
Bsa29I	ATCGAT	1 cut(s)	1429
BsaI	GGTCTC	1 cut(s)	2438
BsaJI	CCNNGG	5 cut(s)	180, 1232, 1313, 1417, 2524
BsaXI	ACNNNNNCTCC	4 cut(s)	504, 534, 1137, 1167
Bsc4I	CCNNNNNNNGG	5 cut(s)	877, 1238, 1340, 1344, 2064
Bse1I	ACTGG	9 cut(s)	211, 404, 539, 775, 933, 1738, 1788, 2325, 2360
Bse21I	CCTNAGG	1 cut(s)	861
Bse3DI	GCAATG	2 cut(s)	724, 1356
BseBI	CCWGG	5 cut(s)	987, 1233, 1314, 1418, 1637
BseCI	ATCGAT	1 cut(s)	1429
BseDI	CCNNGG	5 cut(s)	180, 1232, 1313, 1417, 2524
BseGI	GGATG	6 cut(s)	694, 1201, 1698, 1784, 1977, 2519
BseLI	CCNNNNNNNGG	5 cut(s)	877, 1238, 1340, 1344, 2064
BseMI	GCAATG	2 cut(s)	724, 1356
BseMII	CTCAG	7 cut(s)	509, 657, 875, 1047, 1668, 1979, 2009
BseNI	ACTGG	9 cut(s)	211, 404, 539, 775, 933, 1738, 1788, 2325, 2360
BseRI	GAGGAG	2 cut(s)	1694, 2035
BseXI	GCAGC	8 cut(s)	163, 203, 259, 268, 431, 478, 1536, 2136
BseYI	CCCAGC	1 cut(s)	1344
Bsh1236I	CGCG	3 cut(s)	154, 258, 1005
BshFI	GGCC	4 cut(s)	255, 460, 1037, 1312
BshNI	GGYRCC	1 cut(s)	1780
BshVI	ATCGAT	1 cut(s)	1429
BsiHKAI	GWGCWC	2 cut(s)	642, 1994
BsiSI	CCGG	3 cut(s)	2135, 2402, 2448
BslFI	GGGAC	2 cut(s)	813, 2464
BslI	CCNNNNNNNGG	5 cut(s)	877, 1238, 1340, 1344, 2064
BsmAI	GTCTC	4 cut(s)	326, 732, 1052, 2438
BsmFI	GGGAC	2 cut(s)	813, 2464
BsmI	GAATGC	1 cut(s)	1446
BsnI	GGCC	4 cut(s)	255, 460, 1037, 1312
Bso31I	GGTCTC	1 cut(s)	2438
Bsp1286I	GDGCHC	3 cut(s)	642, 1808, 1994
Bsp1407I	TGTACA	1 cut(s)	721
Bsp1720I	GCTNAGC	2 cut(s)	713, 1956
Bsp19I	CCATGG	1 cut(s)	180
BspACI	CCGC	4 cut(s)	92, 256, 440, 579
BspANI	GGCC	4 cut(s)	255, 460, 1037, 1312
BspCNI	CTCAG	7 cut(s)	508, 658, 874, 1048, 1669, 1980, 2010
BspDI	ATCGAT	1 cut(s)	1429
BspFNI	CGCG	3 cut(s)	154, 258, 1005
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	2 cut(s)	1772, 1782
BspOI	GCTAGC	1 cut(s)	596
BspPI	GGATC	6 cut(s)	50, 226, 671, 851, 1136, 1187
BspQI	GCTCTTC	1 cut(s)	1005
BspT107I	GGYRCC	1 cut(s)	1780
BspTI	CTTAAG	2 cut(s)	1811, 1936
BspTNI	GGTCTC	1 cut(s)	2438
BsrDI	GCAATG	2 cut(s)	724, 1356
BsrGI	TGTACA	1 cut(s)	721
BsrI	ACTGG	9 cut(s)	211, 404, 539, 775, 933, 1738, 1788, 2325, 2360
BssECI	CCNNGG	5 cut(s)	180, 1232, 1313, 1417, 2524
BssT1I	CCWWGG	2 cut(s)	180, 2524
Bst2UI	CCWGG	5 cut(s)	987, 1233, 1314, 1418, 1637
Bst6I	CTCTTC	3 cut(s)	297, 1005, 2133
BstAFI	CTTAAG	2 cut(s)	1811, 1936
BstAPI	GCANNNNNTGC	1 cut(s)	281
BstAUI	TGTACA	1 cut(s)	721
BstC8I	GCNNGC	2 cut(s)	505, 594
BstDSI	CCRYGG	1 cut(s)	180
BstENI	CCTNNNNNAGG	2 cut(s)	1338, 2062
BstF5I	GGATG	6 cut(s)	694, 1201, 1698, 1784, 1977, 2519
BstFNI	CGCG	3 cut(s)	154, 258, 1005
BstHHI	GCGC	2 cut(s)	1007, 2191
BstMAI	GTCTC	4 cut(s)	326, 732, 1052, 2438
BstMWI	GCNNNNNNNGC	9 cut(s)	98, 278, 281, 500, 626, 709, 1004, 2188, 2421
BstNI	CCWGG	5 cut(s)	987, 1233, 1314, 1418, 1637
BstSCI	CCNGG	7 cut(s)	985, 1231, 1312, 1416, 1635, 2133, 2447
BstSFI	CTRYAG	1 cut(s)	1882
BstUI	CGCG	3 cut(s)	154, 258, 1005
BstV1I	GCAGC	8 cut(s)	163, 203, 259, 268, 431, 478, 1536, 2136
BstV2I	GAAGAC	4 cut(s)	567, 1067, 1208, 1956
BstX2I	RGATCY	2 cut(s)	42, 2314
BstYI	RGATCY	2 cut(s)	42, 2314
Bsu15I	ATCGAT	1 cut(s)	1429
Bsu36I	CCTNAGG	1 cut(s)	861
BsuRI	GGCC	4 cut(s)	255, 460, 1037, 1312
BsuTUI	ATCGAT	1 cut(s)	1429
BtgI	CCRYGG	1 cut(s)	180
BtgZI	GCGATG	1 cut(s)	498
BtsCI	GGATG	6 cut(s)	694, 1201, 1698, 1784, 1977, 2519
BtsI	GCAGTG	1 cut(s)	1950
BtsIMutI	CAGTG	3 cut(s)	1537, 1950, 2353
Cac8I	GCNNGC	2 cut(s)	505, 594
CaiI	CAGNNNCTG	1 cut(s)	359
CciI	TCATGA	1 cut(s)	1510
CfoI	GCGC	2 cut(s)	1007, 2191
ClaI	ATCGAT	1 cut(s)	1429
Csp6I	GTAC	7 cut(s)	29, 311, 722, 885, 1154, 1272, 1592
CviAII	CATG	8 cut(s)	181, 328, 872, 1132, 1502, 1511, 1689, 1713
CviQI	GTAC	7 cut(s)	29, 311, 722, 885, 1154, 1272, 1592
EaeI	YGGCCR	1 cut(s)	253
Eam1104I	CTCTTC	3 cut(s)	297, 1005, 2133
EarI	CTCTTC	3 cut(s)	297, 1005, 2133
Ecl136II	GAGCTC	1 cut(s)	1992
Eco130I	CCWWGG	2 cut(s)	180, 2524
Eco24I	GRGCYC	2 cut(s)	1808, 1994
Eco31I	GGTCTC	1 cut(s)	2438
Eco32I	GATATC	1 cut(s)	2445
Eco53kI	GAGCTC	1 cut(s)	1992
Eco57I	CTGAAG	4 cut(s)	731, 1513, 2330, 2516
Eco81I	CCTNAGG	1 cut(s)	861
EcoICRI	GAGCTC	1 cut(s)	1992
EcoNI	CCTNNNNNAGG	2 cut(s)	1338, 2062
EcoRI	GAATTC	2 cut(s)	947, 1619
EcoRII	CCWGG	5 cut(s)	985, 1231, 1312, 1416, 1635
EcoRV	GATATC	1 cut(s)	2445
EcoT14I	CCWWGG	2 cut(s)	180, 2524
EcoT38I	GRGCYC	2 cut(s)	1808, 1994
ErhI	CCWWGG	2 cut(s)	180, 2524
FaeI	CATG	8 cut(s)	184, 331, 875, 1135, 1505, 1514, 1692, 1716
FaqI	GGGAC	2 cut(s)	813, 2464
FatI	CATG	8 cut(s)	180, 327, 871, 1131, 1501, 1510, 1688, 1712
FauNDI	CATATG	4 cut(s)	88, 277, 1009, 2185
FbaI	TGATCA	1 cut(s)	391
FblI	GTMKAC	2 cut(s)	671, 1881
FokI	GGATG	6 cut(s)	701, 1208, 1705, 1771, 1964, 2506
FriOI	GRGCYC	2 cut(s)	1808, 1994
FspBI	CTAG	7 cut(s)	593, 846, 1071, 1547, 2075, 2289, 2312
FspI	TGCGCA	1 cut(s)	2190
GlaI	GCGC	2 cut(s)	1006, 2190
GsaI	CCCAGC	1 cut(s)	1348
GsuI	CTGGAG	2 cut(s)	1658, 2342
HaeIII	GGCC	4 cut(s)	255, 460, 1037, 1312
HapII	CCGG	3 cut(s)	2135, 2402, 2448
HhaI	GCGC	2 cut(s)	1007, 2191
Hin1II	CATG	8 cut(s)	184, 331, 875, 1135, 1505, 1514, 1692, 1716
Hin6I	GCGC	2 cut(s)	1005, 2189
HinP1I	GCGC	2 cut(s)	1005, 2189
HincII	GTYRAC	1 cut(s)	2361
HindII	GTYRAC	1 cut(s)	2361
HindIII	AAGCTT	2 cut(s)	710, 2407
HpaII	CCGG	3 cut(s)	2135, 2402, 2448
HphI	GGTGA	8 cut(s)	112, 1160, 1310, 1592, 1741, 1834, 2218, 2501
Hpy166II	GTNNAC	4 cut(s)	672, 1842, 1882, 2361
Hpy8I	GTNNAC	4 cut(s)	672, 1842, 1882, 2361
HpyAV	CCTTC	7 cut(s)	245, 301, 830, 875, 1344, 1855, 2473
HpyCH4IV	ACGT	2 cut(s)	126, 1330
HpyCH4V	TGCA	8 cut(s)	191, 275, 419, 507, 629, 1135, 1446, 1832
HpyF10VI	GCNNNNNNNGC	9 cut(s)	98, 278, 281, 500, 626, 709, 1004, 2188, 2421
HpySE526I	ACGT	2 cut(s)	126, 1330
Hsp92II	CATG	8 cut(s)	184, 331, 875, 1135, 1505, 1514, 1692, 1716
HspAI	GCGC	2 cut(s)	1005, 2189
Ksp22I	TGATCA	1 cut(s)	391
LguI	GCTCTTC	1 cut(s)	1005
LmnI	GCTCC	1 cut(s)	131
Lsp1109I	GCAGC	8 cut(s)	163, 203, 259, 268, 431, 478, 1536, 2136
LweI	GCATC	4 cut(s)	1558, 2004, 2092, 2528
MaeI	CTAG	7 cut(s)	593, 846, 1071, 1547, 2075, 2289, 2312
MaeII	ACGT	2 cut(s)	126, 1330
MaeIII	GTNAC	6 cut(s)	118, 349, 766, 1303, 1729, 1999
MflI	RGATCY	2 cut(s)	42, 2314
MhlI	GDGCHC	3 cut(s)	642, 1808, 1994
MlyI	GAGTC	6 cut(s)	677, 1489, 1649, 1825, 1888, 2356
MmeI	TCCRAC	3 cut(s)	109, 2005, 2402
MroXI	GAANNNNTTC	2 cut(s)	947, 1706
MslI	CAYNNNNRTG	1 cut(s)	2012
MspA1I	CMGCKG	1 cut(s)	194
MspCI	CTTAAG	2 cut(s)	1811, 1936
MspI	CCGG	3 cut(s)	2135, 2402, 2448
MspR9I	CCNGG	7 cut(s)	987, 1233, 1314, 1418, 1637, 2135, 2449
Mva1269I	GAATGC	1 cut(s)	1446
MvaI	CCWGG	5 cut(s)	987, 1233, 1314, 1418, 1637
MvnI	CGCG	3 cut(s)	154, 258, 1005
MwoI	GCNNNNNNNGC	9 cut(s)	98, 278, 281, 500, 626, 709, 1004, 2188, 2421
NciI	CCSGG	2 cut(s)	2135, 2449
NcoI	CCATGG	1 cut(s)	180
NdeI	CATATG	4 cut(s)	88, 277, 1009, 2185
NheI	GCTAGC	1 cut(s)	592
NlaIII	CATG	8 cut(s)	184, 331, 875, 1135, 1505, 1514, 1692, 1716
NlaIV	GGNNCC	2 cut(s)	1772, 1782
NmuCI	GTSAC	2 cut(s)	118, 1729
NsbI	TGCGCA	1 cut(s)	2190
PagI	TCATGA	1 cut(s)	1510
PciSI	GCTCTTC	1 cut(s)	1005
PctI	GAATGC	1 cut(s)	1446
PdmI	GAANNNNTTC	2 cut(s)	947, 1706
PflMI	CCANNNNNTGG	3 cut(s)	877, 1238, 1344
PfoI	TCCNGGA	1 cut(s)	2447
PleI	GAGTC	6 cut(s)	676, 1488, 1648, 1824, 1888, 2356
PpsI	GAGTC	6 cut(s)	676, 1488, 1648, 1824, 1888, 2356
PsiI	TTATAA	1 cut(s)	1409
Psp124BI	GAGCTC	1 cut(s)	1994
Psp1406I	AACGTT	1 cut(s)	126
Psp6I	CCWGG	5 cut(s)	985, 1231, 1312, 1416, 1635
PspFI	CCCAGC	1 cut(s)	1344
PspGI	CCWGG	5 cut(s)	985, 1231, 1312, 1416, 1635
PspN4I	GGNNCC	2 cut(s)	1772, 1782
PstNI	CAGNNNCTG	1 cut(s)	359
PsuI	RGATCY	2 cut(s)	42, 2314
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	7 cut(s)	30, 312, 723, 886, 1155, 1273, 1593
RsaNI	GTAC	7 cut(s)	29, 311, 722, 885, 1154, 1272, 1592
RseI	CAYNNNNRTG	1 cut(s)	2012
SacI	GAGCTC	1 cut(s)	1994
SapI	GCTCTTC	1 cut(s)	1005
SchI	GAGTC	6 cut(s)	677, 1489, 1649, 1825, 1888, 2356
ScrFI	CCNGG	7 cut(s)	987, 1233, 1314, 1418, 1637, 2135, 2449
SduI	GDGCHC	3 cut(s)	642, 1808, 1994
SfaNI	GCATC	4 cut(s)	1558, 2004, 2092, 2528
SfcI	CTRYAG	1 cut(s)	1882
SmiMI	CAYNNNNRTG	1 cut(s)	2012
SmlI	CTYRAG	7 cut(s)	102, 1775, 1811, 1936, 1942, 2410, 2417
SmoI	CTYRAG	7 cut(s)	102, 1775, 1811, 1936, 1942, 2410, 2417
SpeI	ACTAGT	2 cut(s)	1070, 1546
SsiI	CCGC	4 cut(s)	92, 256, 440, 579
SspI	AATATT	1 cut(s)	1189
SspMI	CTAG	7 cut(s)	593, 846, 1071, 1547, 2075, 2289, 2312
SstI	GAGCTC	1 cut(s)	1994
StyD4I	CCNGG	7 cut(s)	985, 1231, 1312, 1416, 1635, 2133, 2447
StyI	CCWWGG	2 cut(s)	180, 2524
TaiI	ACGT	2 cut(s)	129, 1333
TaqI	TCGA	7 cut(s)	14, 1247, 1429, 1897, 1994, 2098, 2459
TatI	WGTACW	3 cut(s)	28, 721, 1591
TauI	GCSGC	2 cut(s)	258, 582
TscAI	CASTG	3 cut(s)	1537, 1957, 2360
TseFI	GTSAC	2 cut(s)	118, 1729
TseI	GCWGC	8 cut(s)	176, 191, 272, 281, 419, 491, 1524, 2124
Tsp45I	GTSAC	2 cut(s)	118, 1729
TspGWI	ACGGA	1 cut(s)	1220
TspRI	CASTG	3 cut(s)	1537, 1957, 2360
Van91I	CCANNNNNTGG	3 cut(s)	877, 1238, 1344
Vha464I	CTTAAG	2 cut(s)	1811, 1936
XagI	CCTNNNNNAGG	2 cut(s)	1338, 2062
XapI	RAATTY	7 cut(s)	660, 947, 990, 1474, 1505, 1619, 2155
XbaI	TCTAGA	1 cut(s)	2311
XmiI	GTMKAC	2 cut(s)	671, 1881
XmnI	GAANNNNTTC	2 cut(s)	947, 1706
XspI	CTAG	7 cut(s)	593, 846, 1071, 1547, 2075, 2289, 2312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.