Glutamate-gated receptor that probably acts as non- selective cation channel
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ANF_receptor | PF01094 | 60 - 372 | 7.4e-36 | Receptor family ligand binding region |
| Peripla_BP_6 | PF13458 | 85 - 351 | 4.1e-15 | Periplasmic binding protein |
| Lig_chan-Glu_bd | PF10613 | 465 - 550 | 1.2e-08 | Ligated ion channel L-glutamate- and glycine-binding site |
| SBP_bac_3 | PF00497 | 468 - 762 | 8.6e-15 | Bacterial extracellular solute-binding proteins, family 3 |
| Lig_chan | PF00060 | 563 - 640 | 4.7e-13 | Ligand-gated ion channel |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1676 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 851 |
| AccB1I | GGYRCC | 1 cut(s) | 1802 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1211 |
| AccI | GTMKAC | 1 cut(s) | 1725 |
| AciI | CCGC | 5 cut(s) | 200, 1703, 1806, 2610, 2625 |
| AclI | AACGTT | 1 cut(s) | 609 |
| AclWI | GGATC | 2 cut(s) | 260, 1160 |
| AcoI | YGGCCR | 1 cut(s) | 446 |
| AcsI | RAATTY | 6 cut(s) | 978, 1437, 1598, 1772, 2042, 2347 |
| AcuI | CTGAAG | 7 cut(s) | 123, 193, 312, 1040, 2279, 2441, 2579 |
| AfaI | GTAC | 8 cut(s) | 518, 874, 1048, 1077, 1136, 1270, 1572, 2001 |
| AfeI | AGCGCT | 1 cut(s) | 2377 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 674, 1211, 1812 |
| AflIII | ACRYGT | 1 cut(s) | 1091 |
| AhlI | ACTAGT | 1 cut(s) | 908 |
| AjnI | CCWGG | 4 cut(s) | 546, 973, 1357, 1688 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 933, 965 |
| Alw21I | GWGCWC | 2 cut(s) | 385, 2545 |
| Alw26I | GTCTC | 4 cut(s) | 332, 795, 1195, 1232 |
| AlwI | GGATC | 2 cut(s) | 260, 1160 |
| Ama87I | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| Aor51HI | AGCGCT | 1 cut(s) | 2377 |
| AoxI | GGCC | 6 cut(s) | 446, 1023, 1280, 2226, 2356, 2598 |
| ApeKI | GCWGC | 8 cut(s) | 197, 213, 278, 287, 353, 407, 479, 2084 |
| ApoI | RAATTY | 6 cut(s) | 978, 1437, 1598, 1772, 2042, 2347 |
| AseI | ATTAAT | 1 cut(s) | 1907 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1527 |
| AspA2I | CCTAGG | 1 cut(s) | 2452 |
| AspLEI | GCGC | 2 cut(s) | 1758, 2378 |
| AspS9I | GGNCC | 5 cut(s) | 1192, 1281, 1781, 2356, 2627 |
| AsuC2I | CCSGG | 3 cut(s) | 1284, 2212, 2213 |
| AsuHPI | GGTGA | 9 cut(s) | 67, 406, 578, 689, 1136, 1462, 1558, 1816, 2212 |
| AsuNHI | GCTAGC | 1 cut(s) | 580 |
| AvaI | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| AvaII | GGWCC | 3 cut(s) | 1192, 1781, 2627 |
| AvrII | CCTAGG | 1 cut(s) | 2452 |
| AxyI | CCTNAGG | 1 cut(s) | 2580 |
| BalI | TGGCCA | 1 cut(s) | 448 |
| BanI | GGYRCC | 1 cut(s) | 1802 |
| BanII | GRGCYC | 4 cut(s) | 385, 1306, 1488, 2545 |
| BauI | CACGAG | 1 cut(s) | 2438 |
| Bbv12I | GWGCWC | 2 cut(s) | 385, 2545 |
| BbvI | GCAGC | 8 cut(s) | 209, 225, 265, 274, 365, 419, 466, 2071 |
| BccI | CCATC | 3 cut(s) | 778, 1958, 2243 |
| BceAI | ACGGC | 1 cut(s) | 1478 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 461, 495 |
| BciT130I | CCWGG | 4 cut(s) | 548, 975, 1359, 1690 |
| BclI | TGATCA | 3 cut(s) | 81, 2557, 2565 |
| BcnI | CCSGG | 3 cut(s) | 1284, 2212, 2213 |
| BcoDI | GTCTC | 4 cut(s) | 332, 795, 1195, 1232 |
| BcuI | ACTAGT | 1 cut(s) | 908 |
| BfaI | CTAG | 9 cut(s) | 359, 581, 669, 683, 909, 1574, 2177, 2234, 2453 |
| BfoI | RGCGCY | 2 cut(s) | 1759, 2379 |
| BglII | AGATCT | 1 cut(s) | 690 |
| BisI | GCNGC | 9 cut(s) | 198, 214, 279, 288, 354, 408, 480, 1704, 2085 |
| BlnI | CCTAGG | 1 cut(s) | 2452 |
| BlsI | GCNGC | 9 cut(s) | 199, 215, 280, 289, 355, 409, 481, 1705, 2086 |
| BmcAI | AGTACT | 2 cut(s) | 1048, 1077 |
| Bme1390I | CCNGG | 7 cut(s) | 548, 975, 1284, 1359, 1690, 2212, 2213 |
| Bme18I | GGWCC | 3 cut(s) | 1192, 1781, 2627 |
| BmeT110I | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| BmgT120I | GGNCC | 5 cut(s) | 1192, 1281, 1781, 2356, 2627 |
| BmiI | GGNNCC | 4 cut(s) | 50, 377, 1356, 1804 |
| BmrFI | CCNGG | 7 cut(s) | 548, 975, 1284, 1359, 1690, 2212, 2213 |
| BmsI | GCATC | 8 cut(s) | 290, 504, 559, 567, 637, 1537, 2434, 2596 |
| BmtI | GCTAGC | 1 cut(s) | 584 |
| BpmI | CTGGAG | 2 cut(s) | 719, 1772 |
| BpuEI | CTTGAG | 4 cut(s) | 369, 834, 1363, 2356 |
| BpuMI | CCSGG | 3 cut(s) | 1284, 2212, 2213 |
| BsaAI | YACGTR | 1 cut(s) | 1092 |
| BsaI | GGTCTC | 1 cut(s) | 1195 |
| BsaJI | CCNNGG | 5 cut(s) | 644, 1689, 2211, 2223, 2452 |
| BsaWI | WCCGGW | 1 cut(s) | 391 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 33, 63, 129, 159, 1745, 1775 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 674, 1211, 1812 |
| Bse1I | ACTGG | 2 cut(s) | 449, 736 |
| Bse21I | CCTNAGG | 1 cut(s) | 2580 |
| Bse3DI | GCAATG | 2 cut(s) | 1326, 2464 |
| BseBI | CCWGG | 4 cut(s) | 548, 975, 1359, 1690 |
| BseDI | CCNNGG | 5 cut(s) | 644, 1689, 2211, 2223, 2452 |
| BseGI | GGATG | 6 cut(s) | 556, 582, 1674, 1969, 2254, 2449 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 674, 1211, 1812 |
| BseMI | GCAATG | 2 cut(s) | 1326, 2464 |
| BseMII | CTCAG | 6 cut(s) | 105, 497, 585, 819, 1619, 2594 |
| BseNI | ACTGG | 2 cut(s) | 449, 736 |
| BseXI | GCAGC | 8 cut(s) | 209, 225, 265, 274, 365, 419, 466, 2071 |
| BseYI | CCCAGC | 3 cut(s) | 572, 748, 1314 |
| BsgI | GTGCAG | 1 cut(s) | 1397 |
| Bsh1285I | CGRYCG | 1 cut(s) | 475 |
| BshFI | GGCC | 6 cut(s) | 448, 1025, 1282, 2228, 2358, 2600 |
| BshNI | GGYRCC | 1 cut(s) | 1802 |
| BsiEI | CGRYCG | 1 cut(s) | 475 |
| BsiHKAI | GWGCWC | 2 cut(s) | 385, 2545 |
| BsiHKCI | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| BsiSI | CCGG | 3 cut(s) | 392, 1284, 2212 |
| BsiWI | CGTACG | 1 cut(s) | 1268 |
| BslFI | GGGAC | 1 cut(s) | 801 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 674, 1211, 1812 |
| BsmAI | GTCTC | 4 cut(s) | 332, 795, 1195, 1232 |
| BsmFI | GGGAC | 1 cut(s) | 801 |
| BsmI | GAATGC | 1 cut(s) | 1431 |
| BsnI | GGCC | 6 cut(s) | 448, 1025, 1282, 2228, 2358, 2600 |
| Bso31I | GGTCTC | 1 cut(s) | 1195 |
| BsoBI | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| Bsp1286I | GDGCHC | 4 cut(s) | 385, 1306, 1488, 2545 |
| Bsp1407I | TGTACA | 2 cut(s) | 516, 1134 |
| Bsp143I | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| BspACI | CCGC | 5 cut(s) | 200, 1703, 1806, 2610, 2625 |
| BspANI | GGCC | 6 cut(s) | 448, 1025, 1282, 2228, 2358, 2600 |
| BspCNI | CTCAG | 6 cut(s) | 104, 496, 586, 818, 1618, 2593 |
| BspHI | TCATGA | 2 cut(s) | 859, 2118 |
| BspLI | GGNNCC | 4 cut(s) | 50, 377, 1356, 1804 |
| BspOI | GCTAGC | 1 cut(s) | 584 |
| BspPI | GGATC | 2 cut(s) | 260, 1160 |
| BspT107I | GGYRCC | 1 cut(s) | 1802 |
| BspTNI | GGTCTC | 1 cut(s) | 1195 |
| BsrDI | GCAATG | 2 cut(s) | 1326, 2464 |
| BsrGI | TGTACA | 2 cut(s) | 516, 1134 |
| BsrI | ACTGG | 2 cut(s) | 449, 736 |
| BssECI | CCNNGG | 5 cut(s) | 644, 1689, 2211, 2223, 2452 |
| BssMI | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| BssSI | CACGAG | 1 cut(s) | 2438 |
| BssT1I | CCWWGG | 2 cut(s) | 2223, 2452 |
| Bst2BI | CACGAG | 1 cut(s) | 2438 |
| Bst2UI | CCWGG | 4 cut(s) | 548, 975, 1359, 1690 |
| Bst4CI | ACNGT | 8 cut(s) | 557, 1046, 1075, 1273, 1424, 1570, 2300, 2491 |
| Bst6I | CTCTTC | 3 cut(s) | 288, 681, 793 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 287 |
| BstAUI | TGTACA | 2 cut(s) | 516, 1134 |
| BstBAI | YACGTR | 1 cut(s) | 1092 |
| BstC8I | GCNNGC | 2 cut(s) | 469, 582 |
| BstDEI | CTNAG | 7 cut(s) | 91, 483, 594, 805, 921, 1605, 2580 |
| BstDSI | CCRYGG | 1 cut(s) | 644 |
| BstF5I | GGATG | 6 cut(s) | 556, 582, 1674, 1969, 2254, 2449 |
| BstH2I | RGCGCY | 2 cut(s) | 1759, 2379 |
| BstHHI | GCGC | 2 cut(s) | 1758, 2378 |
| BstKTI | GATC | 9 cut(s) | 84, 268, 475, 693, 1003, 1014, 1155, 2560, 2568 |
| BstMAI | GTCTC | 4 cut(s) | 332, 795, 1195, 1232 |
| BstMBI | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| BstMCI | CGRYCG | 1 cut(s) | 475 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 61, 213, 284, 287, 362, 992, 1483, 1499 |
| BstNI | CCWGG | 4 cut(s) | 548, 975, 1359, 1690 |
| BstSCI | CCNGG | 7 cut(s) | 546, 973, 1282, 1357, 1688, 2210, 2211 |
| BstV1I | GCAGC | 8 cut(s) | 209, 225, 265, 274, 365, 419, 466, 2071 |
| BstX2I | RGATCY | 2 cut(s) | 265, 690 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 611 |
| BstYI | RGATCY | 2 cut(s) | 265, 690 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2580 |
| BsuRI | GGCC | 6 cut(s) | 448, 1025, 1282, 2228, 2358, 2600 |
| BtgI | CCRYGG | 1 cut(s) | 644 |
| BtsCI | GGATG | 6 cut(s) | 556, 582, 1674, 1969, 2254, 2449 |
| BtsI | GCAGTG | 3 cut(s) | 1326, 1409, 2044 |
| BtsIMutI | CAGTG | 4 cut(s) | 1326, 1409, 1783, 2044 |
| Cac8I | GCNNGC | 2 cut(s) | 469, 582 |
| CciI | TCATGA | 2 cut(s) | 859, 2118 |
| CfoI | GCGC | 2 cut(s) | 1758, 2378 |
| Cfr13I | GGNCC | 5 cut(s) | 1192, 1281, 1781, 2356, 2627 |
| Cfr9I | CCCGGG | 1 cut(s) | 2211 |
| CseI | GACGC | 1 cut(s) | 2329 |
| Csp6I | GTAC | 8 cut(s) | 517, 873, 1047, 1076, 1135, 1269, 1571, 2000 |
| CviAII | CATG | 9 cut(s) | 79, 334, 440, 860, 1490, 1665, 1990, 2119, 2561 |
| CviQI | GTAC | 8 cut(s) | 517, 873, 1047, 1076, 1135, 1269, 1571, 2000 |
| DdeI | CTNAG | 7 cut(s) | 91, 483, 594, 805, 921, 1605, 2580 |
| DpnI | GATC | 9 cut(s) | 83, 267, 474, 692, 1002, 1013, 1154, 2559, 2567 |
| DpnII | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| DraI | TTTAAA | 1 cut(s) | 2065 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 851 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 851 |
| EaeI | YGGCCR | 1 cut(s) | 446 |
| Eam1104I | CTCTTC | 3 cut(s) | 288, 681, 793 |
| EarI | CTCTTC | 3 cut(s) | 288, 681, 793 |
| Ecl136II | GAGCTC | 2 cut(s) | 383, 2543 |
| Eco130I | CCWWGG | 2 cut(s) | 2223, 2452 |
| Eco147I | AGGCCT | 1 cut(s) | 2600 |
| Eco24I | GRGCYC | 4 cut(s) | 385, 1306, 1488, 2545 |
| Eco31I | GGTCTC | 1 cut(s) | 1195 |
| Eco47I | GGWCC | 3 cut(s) | 1192, 1781, 2627 |
| Eco47III | AGCGCT | 1 cut(s) | 2377 |
| Eco53kI | GAGCTC | 2 cut(s) | 383, 2543 |
| Eco57I | CTGAAG | 7 cut(s) | 123, 193, 312, 1040, 2279, 2441, 2579 |
| Eco81I | CCTNAGG | 1 cut(s) | 2580 |
| Eco88I | CYCGRG | 3 cut(s) | 717, 1872, 2211 |
| EcoICRI | GAGCTC | 2 cut(s) | 383, 2543 |
| EcoRI | GAATTC | 3 cut(s) | 1598, 1772, 2042 |
| EcoRII | CCWGG | 4 cut(s) | 546, 973, 1357, 1688 |
| EcoT14I | CCWWGG | 2 cut(s) | 2223, 2452 |
| EcoT22I | ATGCAT | 2 cut(s) | 497, 2449 |
| EcoT38I | GRGCYC | 4 cut(s) | 385, 1306, 1488, 2545 |
| ErhI | CCWWGG | 2 cut(s) | 2223, 2452 |
| FaeI | CATG | 9 cut(s) | 82, 337, 443, 863, 1493, 1668, 1993, 2122, 2564 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1943, 1975 |
| FaqI | GGGAC | 1 cut(s) | 801 |
| FatI | CATG | 9 cut(s) | 78, 333, 439, 859, 1489, 1664, 1989, 2118, 2560 |
| FauI | CCCGC | 1 cut(s) | 2617 |
| FauNDI | CATATG | 2 cut(s) | 1480, 2104 |
| FbaI | TGATCA | 3 cut(s) | 81, 2557, 2565 |
| FblI | GTMKAC | 1 cut(s) | 1725 |
| Fnu4HI | GCNGC | 9 cut(s) | 198, 214, 279, 288, 354, 408, 480, 1704, 2085 |
| FokI | GGATG | 6 cut(s) | 563, 589, 1681, 1976, 2261, 2456 |
| FriOI | GRGCYC | 4 cut(s) | 385, 1306, 1488, 2545 |
| Fsp4HI | GCNGC | 9 cut(s) | 198, 214, 279, 288, 354, 408, 480, 1704, 2085 |
| FspBI | CTAG | 9 cut(s) | 359, 581, 669, 683, 909, 1574, 2177, 2234, 2453 |
| GlaI | GCGC | 2 cut(s) | 1757, 2377 |
| GluI | GCNGC | 9 cut(s) | 198, 214, 279, 288, 354, 408, 480, 1704, 2085 |
| GsaI | CCCAGC | 3 cut(s) | 576, 752, 1318 |
| GsuI | CTGGAG | 2 cut(s) | 719, 1772 |
| HaeII | RGCGCY | 2 cut(s) | 1759, 2379 |
| HaeIII | GGCC | 6 cut(s) | 448, 1025, 1282, 2228, 2358, 2600 |
| HapII | CCGG | 3 cut(s) | 392, 1284, 2212 |
| HgaI | GACGC | 1 cut(s) | 2329 |
| HhaI | GCGC | 2 cut(s) | 1758, 2378 |
| Hin1II | CATG | 9 cut(s) | 82, 337, 443, 863, 1493, 1668, 1993, 2122, 2564 |
| Hin6I | GCGC | 2 cut(s) | 1756, 2376 |
| HinP1I | GCGC | 2 cut(s) | 1756, 2376 |
| HincII | GTYRAC | 1 cut(s) | 2283 |
| HindII | GTYRAC | 1 cut(s) | 2283 |
| HindIII | AAGCTT | 1 cut(s) | 698 |
| HinfI | GANTC | 8 cut(s) | 226, 803, 845, 882, 1619, 1792, 1970, 2505 |
| HpaII | CCGG | 3 cut(s) | 392, 1284, 2212 |
| HphI | GGTGA | 9 cut(s) | 67, 406, 578, 689, 1136, 1462, 1558, 1816, 2212 |
| Hpy166II | GTNNAC | 6 cut(s) | 519, 680, 1137, 1726, 2283, 2630 |
| Hpy188I | TCNGA | 7 cut(s) | 94, 259, 486, 595, 1797, 2193, 2320 |
| Hpy8I | GTNNAC | 6 cut(s) | 519, 680, 1137, 1726, 2283, 2630 |
| HpyAV | CCTTC | 9 cut(s) | 251, 307, 998, 1064, 1163, 1381, 1831, 2405, 2416 |
| HpyCH4III | ACNGT | 8 cut(s) | 557, 1046, 1075, 1273, 1424, 1570, 2300, 2491 |
| HpyCH4IV | ACGT | 2 cut(s) | 609, 1091 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 61, 213, 284, 287, 362, 992, 1483, 1499 |
| HpyF3I | CTNAG | 7 cut(s) | 91, 483, 594, 805, 921, 1605, 2580 |
| HpySE526I | ACGT | 2 cut(s) | 609, 1091 |
| Hsp92II | CATG | 9 cut(s) | 82, 337, 443, 863, 1493, 1668, 1993, 2122, 2564 |
| HspAI | GCGC | 2 cut(s) | 1756, 2376 |
| Ksp22I | TGATCA | 3 cut(s) | 81, 2557, 2565 |
| Kzo9I | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| LmnI | GCTCC | 5 cut(s) | 54, 137, 1753, 2548, 2584 |
| Lsp1109I | GCAGC | 8 cut(s) | 209, 225, 265, 274, 365, 419, 466, 2071 |
| LweI | GCATC | 8 cut(s) | 290, 504, 559, 567, 637, 1537, 2434, 2596 |
| MaeI | CTAG | 9 cut(s) | 359, 581, 669, 683, 909, 1574, 2177, 2234, 2453 |
| MaeII | ACGT | 2 cut(s) | 609, 1091 |
| MaeIII | GTNAC | 4 cut(s) | 754, 1981, 2262, 2294 |
| MalI | GATC | 9 cut(s) | 83, 267, 474, 692, 1002, 1013, 1154, 2559, 2567 |
| MboI | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| MfeI | CAATTG | 1 cut(s) | 2205 |
| MflI | RGATCY | 2 cut(s) | 265, 690 |
| MhlI | GDGCHC | 4 cut(s) | 385, 1306, 1488, 2545 |
| MlsI | TGGCCA | 1 cut(s) | 448 |
| MluNI | TGGCCA | 1 cut(s) | 448 |
| MlyI | GAGTC | 4 cut(s) | 220, 797, 839, 1628 |
| MmeI | TCCRAC | 2 cut(s) | 115, 1537 |
| Mox20I | TGGCCA | 1 cut(s) | 448 |
| Mph1103I | ATGCAT | 2 cut(s) | 497, 2449 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1527 |
| MscI | TGGCCA | 1 cut(s) | 448 |
| MslI | CAYNNNNRTG | 3 cut(s) | 77, 161, 2442 |
| Msp20I | TGGCCA | 1 cut(s) | 448 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspI | CCGG | 3 cut(s) | 392, 1284, 2212 |
| MspR9I | CCNGG | 7 cut(s) | 548, 975, 1284, 1359, 1690, 2212, 2213 |
| MunI | CAATTG | 1 cut(s) | 2205 |
| Mva1269I | GAATGC | 1 cut(s) | 1431 |
| MvaI | CCWGG | 4 cut(s) | 548, 975, 1359, 1690 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 61, 213, 284, 287, 362, 992, 1483, 1499 |
| NciI | CCSGG | 3 cut(s) | 1284, 2212, 2213 |
| NdeI | CATATG | 2 cut(s) | 1480, 2104 |
| NdeII | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| NheI | GCTAGC | 1 cut(s) | 580 |
| NlaIII | CATG | 9 cut(s) | 82, 337, 443, 863, 1493, 1668, 1993, 2122, 2564 |
| NlaIV | GGNNCC | 4 cut(s) | 50, 377, 1356, 1804 |
| NmuCI | GTSAC | 3 cut(s) | 754, 2262, 2294 |
| NsiI | ATGCAT | 2 cut(s) | 497, 2449 |
| PaeR7I | CTCGAG | 1 cut(s) | 1872 |
| PagI | TCATGA | 2 cut(s) | 859, 2118 |
| PceI | AGGCCT | 1 cut(s) | 2600 |
| PctI | GAATGC | 1 cut(s) | 1431 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1527 |
| PfeI | GAWTC | 4 cut(s) | 882, 1792, 1970, 2505 |
| Pfl23II | CGTACG | 1 cut(s) | 1268 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1211 |
| PkrI | GCNGC | 9 cut(s) | 199, 215, 280, 289, 355, 409, 481, 1705, 2086 |
| Ple19I | CGATCG | 1 cut(s) | 475 |
| PleI | GAGTC | 4 cut(s) | 220, 797, 839, 1627 |
| PpsI | GAGTC | 4 cut(s) | 220, 797, 839, 1627 |
| Ppu21I | YACGTR | 1 cut(s) | 1092 |
| PshBI | ATTAAT | 1 cut(s) | 1907 |
| PsiI | TTATAA | 1 cut(s) | 1676 |
| Psp124BI | GAGCTC | 2 cut(s) | 385, 2545 |
| Psp1406I | AACGTT | 1 cut(s) | 609 |
| Psp6I | CCWGG | 4 cut(s) | 546, 973, 1357, 1688 |
| PspFI | CCCAGC | 3 cut(s) | 572, 748, 1314 |
| PspGI | CCWGG | 4 cut(s) | 546, 973, 1357, 1688 |
| PspLI | CGTACG | 1 cut(s) | 1268 |
| PspN4I | GGNNCC | 4 cut(s) | 50, 377, 1356, 1804 |
| PspPI | GGNCC | 5 cut(s) | 1192, 1281, 1781, 2356, 2627 |
| PspXI | VCTCGAGB | 1 cut(s) | 1872 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1512, 1544 |
| PsuI | RGATCY | 2 cut(s) | 265, 690 |
| PvuI | CGATCG | 1 cut(s) | 475 |
| RsaI | GTAC | 8 cut(s) | 518, 874, 1048, 1077, 1136, 1270, 1572, 2001 |
| RsaNI | GTAC | 8 cut(s) | 517, 873, 1047, 1076, 1135, 1269, 1571, 2000 |
| RseI | CAYNNNNRTG | 3 cut(s) | 77, 161, 2442 |
| SacI | GAGCTC | 2 cut(s) | 385, 2545 |
| SatI | GCNGC | 9 cut(s) | 198, 214, 279, 288, 354, 408, 480, 1704, 2085 |
| Sau3AI | GATC | 9 cut(s) | 81, 265, 472, 690, 1000, 1011, 1152, 2557, 2565 |
| Sau96I | GGNCC | 5 cut(s) | 1192, 1281, 1781, 2356, 2627 |
| ScaI | AGTACT | 2 cut(s) | 1048, 1077 |
| SchI | GAGTC | 4 cut(s) | 220, 797, 839, 1628 |
| ScrFI | CCNGG | 7 cut(s) | 548, 975, 1284, 1359, 1690, 2212, 2213 |
| SduI | GDGCHC | 4 cut(s) | 385, 1306, 1488, 2545 |
| SfaNI | GCATC | 8 cut(s) | 290, 504, 559, 567, 637, 1537, 2434, 2596 |
| Sfr274I | CTCGAG | 1 cut(s) | 1872 |
| SinI | GGWCC | 3 cut(s) | 1192, 1781, 2627 |
| SlaI | CTCGAG | 1 cut(s) | 1872 |
| SmaI | CCCGGG | 1 cut(s) | 2213 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 77, 161, 2442 |
| SmlI | CTYRAG | 5 cut(s) | 384, 849, 1342, 1872, 2335 |
| SmoI | CTYRAG | 5 cut(s) | 384, 849, 1342, 1872, 2335 |
| SpeI | ACTAGT | 1 cut(s) | 908 |
| SseBI | AGGCCT | 1 cut(s) | 2600 |
| SsiI | CCGC | 5 cut(s) | 200, 1703, 1806, 2610, 2625 |
| SspI | AATATT | 2 cut(s) | 1146, 1162 |
| SspMI | CTAG | 9 cut(s) | 359, 581, 669, 683, 909, 1574, 2177, 2234, 2453 |
| SstI | GAGCTC | 2 cut(s) | 385, 2545 |
| StuI | AGGCCT | 1 cut(s) | 2600 |
| StyD4I | CCNGG | 7 cut(s) | 546, 973, 1282, 1357, 1688, 2210, 2211 |
| StyI | CCWWGG | 2 cut(s) | 2223, 2452 |
| TaaI | ACNGT | 8 cut(s) | 557, 1046, 1075, 1273, 1424, 1570, 2300, 2491 |
| TaiI | ACGT | 2 cut(s) | 612, 1094 |
| TaqI | TCGA | 5 cut(s) | 250, 843, 991, 1873, 1926 |
| TaqII | GACCGA | 1 cut(s) | 1596 |
| TatI | WGTACW | 4 cut(s) | 516, 1046, 1075, 1134 |
| TauI | GCSGC | 1 cut(s) | 1706 |
| TfiI | GAWTC | 4 cut(s) | 882, 1792, 1970, 2505 |
| TscAI | CASTG | 4 cut(s) | 1333, 1416, 1783, 2044 |
| TseFI | GTSAC | 3 cut(s) | 754, 2262, 2294 |
| TseI | GCWGC | 8 cut(s) | 197, 213, 278, 287, 353, 407, 479, 2084 |
| Tsp45I | GTSAC | 3 cut(s) | 754, 2262, 2294 |
| TspGWI | ACGGA | 2 cut(s) | 1364, 2085 |
| TspMI | CCCGGG | 1 cut(s) | 2211 |
| TspRI | CASTG | 4 cut(s) | 1333, 1416, 1783, 2044 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1211 |
| VpaK11BI | GGWCC | 3 cut(s) | 1192, 1781, 2627 |
| VspI | ATTAAT | 1 cut(s) | 1907 |
| XapI | RAATTY | 6 cut(s) | 978, 1437, 1598, 1772, 2042, 2347 |
| XbaI | TCTAGA | 1 cut(s) | 2233 |
| XhoI | CTCGAG | 1 cut(s) | 1872 |
| XmaI | CCCGGG | 1 cut(s) | 2211 |
| XmaJI | CCTAGG | 1 cut(s) | 2452 |
| XmiI | GTMKAC | 1 cut(s) | 1725 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1527 |
| XspI | CTAG | 9 cut(s) | 359, 581, 669, 683, 909, 1574, 2177, 2234, 2453 |
| ZrmI | AGTACT | 2 cut(s) | 1048, 1077 |
| Zsp2I | ATGCAT | 2 cut(s) | 497, 2449 |