Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001709.1

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

16399 .. 19598

Gene Structure 3200 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001709.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

atgacttctcctttcactactactgttagccaagtccaaagactttggcatctgtttcttctgttcatcatcatcacatactcctatggagttgaagctgaaaataagatgagtgtcactaatgttggagcaatcattagttttaattctcgaatcggaaaacaacagaaaactgccatggagattgcagctgaaaacttcaacaaccattcaaagaatcataagataatccttcattttctagattccaatagagatcccttacttgctgctttttctgctgaagaattgataaaggagaagaaggtaaaactgctaatgggcatggagacttggcaggaagctgctctagtggctgatgtgggaaatcgagctcaaattccagtgatttcatttgcggcaccaactattaccacccctctaatgcaacgccgctggccatttttgatacgaacgtctagcgatggtgctgctcaaatgaaatgcattgcagacatggtttctgcatacaactggaaaagggttgtggtgatatacgaagatgatggttacggtggtgatgtcgggacactagctcttttatccgaggctcttcaagatgttggttcaaagattgagcatcgtctggttctccctcaggtttcttctgagtttaatcctaattgggttgaacaagaagtgctgttgaagcttcccacctttcaatctcgggtgttcattgtgcttcagtcatctttaccagctgtgattaatctattcagggtggcaaagaagatgggacttgtaggaagagactcggcttggataatcacagagagaattactagtctgcttgacactcaagtcaatcatgatatggaaggtattttgggaatcaagagctactatgccactaatactagttcctatatcaagttcaacaaggcattccaaaaaaagtatccagaaaaagatgactccaggccaggaatttatgctcttcgagcatatgatcatactagaattgtaatacaggccataagaatgagcagtaacagtactactaacattcaggttgtgttaagtacagtgctaagaaattatcagggtttaagtgggaaaatgcacattgaaggaggtgaagtgttgttctctcccatattcaggatcgtaaacattgtggaagggaacagatacaaagagttgaacttttggagaccagaggttgggttctcagaaagcctttcaaaagaaacaagcaaaaacagaagtgatgatgctggtgcagtagtttggccagggaatctaagtcaacgagctcctaaaggctgggcaatgccgactgctgataagccaataataattggggttccaggtatttctaccagtagatttgtaagggctgaggcagggcacttttacggtttctgcattgaaattttccacaaggtgcgaagtcgtttgaattatactctgcattatgaatttcaggcctttgatggctcgtatgatgatctggtagatcaagtccataacaagatatttcagaaaggctctccaattgccggggatttcaccatggccattctagagttattggaggatggagaagtgaagtcacttgaggatacttggttgacaccgaatcctgagtgtccaaacaattcaacttccggtgaaccagaaagcttgaacgtcaagaattttatgggcctttatgtaatatctgctgctacttccaccatttgctttctatcatctctcactatccagttgaagaagtttcaccgagaccaggaagcatacggaggcaatgcaagtgataaaagtgtttggaacagaacacttagaatggcaagatttgtatgtaatagagagctccatgttccaagcagagctccaagttctgttgatgtgccggaattgacttctttccaatgggagcctgcgatcacttccacttttccaccactcagaagcatcatttatccaccctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

658

Amino Acids

73.97

Weight (kDa)

8.08

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	842
AccB1I	GGYRCC	1 cut(s)	400
AccB7I	CCANNNNNTGG	1 cut(s)	1205
AciI	CCGC	2 cut(s)	398, 433
AclWI	GGATC	2 cut(s)	251, 1154
AcoI	YGGCCR	3 cut(s)	437, 1274, 1560
AcsI	RAATTY	5 cut(s)	378, 969, 1416, 1463, 1681
AcuI	CTGAAG	2 cut(s)	303, 710
AdeI	CACNNNGTG	1 cut(s)	1429
AfaI	GTAC	2 cut(s)	1039, 1066
AfiI	CCNNNNNNNGG	4 cut(s)	1143, 1205, 1544, 1774
AhlI	ACTAGT	2 cut(s)	824, 899
AjnI	CCWGG	5 cut(s)	959, 964, 1276, 1351, 1773
Alw21I	GWGCWC	4 cut(s)	376, 1300, 1860, 1879
Alw26I	GTCTC	4 cut(s)	323, 786, 1189, 1764
AlwI	GGATC	2 cut(s)	251, 1154
Ama87I	CYCGRG	1 cut(s)	708
AoxI	GGCC	7 cut(s)	437, 962, 1014, 1274, 1470, 1560, 1690
ApeKI	GCWGC	5 cut(s)	188, 269, 344, 470, 1709
ApoI	RAATTY	5 cut(s)	378, 969, 1416, 1463, 1681
AseI	ATTAAT	1 cut(s)	750
AspS9I	GGNCC	1 cut(s)	1690
AsuC2I	CCSGG	1 cut(s)	1546
AsuHPI	GGTGA	6 cut(s)	541, 569, 1130, 1546, 1667, 1757
AvaI	CYCGRG	1 cut(s)	708
AxyI	CCTNAGG	1 cut(s)	636
BaeGI	GKGCMC	1 cut(s)	1395
BaeI	ACNNNNGTAYC	2 cut(s)	440, 473
BalI	TGGCCA	3 cut(s)	439, 1276, 1562
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	4 cut(s)	376, 1300, 1860, 1879
Bbv12I	GWGCWC	4 cut(s)	376, 1300, 1860, 1879
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	5 cut(s)	200, 256, 331, 457, 1696
BccI	CCATC	5 cut(s)	458, 539, 769, 1472, 1577
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	5 cut(s)	961, 966, 1278, 1353, 1775
BciVI	GTATCC	2 cut(s)	951, 1600
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	1 cut(s)	1546
BcoDI	GTCTC	4 cut(s)	323, 786, 1189, 1764
BcuI	ACTAGT	2 cut(s)	824, 899
BfaI	CTAG	9 cut(s)	242, 350, 459, 572, 825, 900, 999, 1568, 1975
BfuI	GTATCC	2 cut(s)	951, 1600
BisI	GCNGC	7 cut(s)	189, 270, 345, 399, 433, 471, 1710
BlsI	GCNGC	7 cut(s)	190, 271, 346, 400, 434, 472, 1711
BmcAI	AGTACT	1 cut(s)	1039
Bme1390I	CCNGG	6 cut(s)	961, 966, 1278, 1353, 1546, 1775
BmeT110I	CYCGRG	1 cut(s)	708
BmgT120I	GGNCC	1 cut(s)	1690
BmiI	GGNNCC	3 cut(s)	402, 1350, 1923
BmrFI	CCNGG	6 cut(s)	961, 966, 1278, 1353, 1546, 1775
BmsI	GCATC	4 cut(s)	58, 628, 1246, 1968
BpmI	CTGGAG	1 cut(s)	943
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuEI	CTTGAG	2 cut(s)	825, 1622
BpuMI	CCSGG	1 cut(s)	1546
BsaI	GGTCTC	2 cut(s)	1189, 1764
BsaJI	CCNNGG	5 cut(s)	177, 585, 1277, 1545, 1557
BsaWI	WCCGGW	1 cut(s)	1652
BsaXI	ACNNNNNCTCC	2 cut(s)	1107, 1137
Bsc4I	CCNNNNNNNGG	4 cut(s)	1143, 1205, 1544, 1774
Bse1I	ACTGG	4 cut(s)	383, 518, 1365, 1750
Bse21I	CCTNAGG	1 cut(s)	636
Bse3DI	GCAATG	3 cut(s)	486, 1320, 1798
BseBI	CCWGG	5 cut(s)	961, 966, 1278, 1353, 1775
BseDI	CCNNGG	5 cut(s)	177, 585, 1277, 1545, 1557
BseGI	GGATG	1 cut(s)	1588
BseLI	CCNNNNNNNGG	4 cut(s)	1143, 1205, 1544, 1774
BseMI	GCAATG	3 cut(s)	486, 1320, 1798
BseMII	CTCAG	6 cut(s)	639, 650, 1227, 1374, 1620, 1966
BseNI	ACTGG	4 cut(s)	383, 518, 1365, 1750
BseSI	GKGCMC	1 cut(s)	1395
BseXI	GCAGC	5 cut(s)	200, 256, 331, 457, 1696
BseYI	CCCAGC	1 cut(s)	1308
BsgI	GTGCAG	1 cut(s)	1284
BshFI	GGCC	7 cut(s)	439, 964, 1016, 1276, 1472, 1562, 1692
BshNI	GGYRCC	1 cut(s)	400
BsiHKAI	GWGCWC	4 cut(s)	376, 1300, 1860, 1879
BsiHKCI	CYCGRG	1 cut(s)	708
BsiSI	CCGG	3 cut(s)	1545, 1653, 1898
BslFI	GGGAC	2 cut(s)	580, 792
BslI	CCNNNNNNNGG	4 cut(s)	1143, 1205, 1544, 1774
BsmAI	GTCTC	4 cut(s)	323, 786, 1189, 1764
BsmFI	GGGAC	2 cut(s)	580, 792
BsmI	GAATGC	1 cut(s)	926
BsnI	GGCC	7 cut(s)	439, 964, 1016, 1276, 1472, 1562, 1692
Bso31I	GGTCTC	2 cut(s)	1189, 1764
BsoBI	CYCGRG	1 cut(s)	708
Bsp1286I	GDGCHC	5 cut(s)	376, 1300, 1395, 1860, 1879
Bsp143I	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
Bsp19I	CCATGG	2 cut(s)	177, 1557
BspACI	CCGC	2 cut(s)	398, 433
BspANI	GGCC	7 cut(s)	439, 964, 1016, 1276, 1472, 1562, 1692
BspCNI	CTCAG	6 cut(s)	640, 649, 1226, 1375, 1621, 1965
BspHI	TCATGA	1 cut(s)	850
BspLI	GGNNCC	3 cut(s)	402, 1350, 1923
BspPI	GGATC	2 cut(s)	251, 1154
BspQI	GCTCTTC	2 cut(s)	597, 984
BspT107I	GGYRCC	1 cut(s)	400
BspTNI	GGTCTC	2 cut(s)	1189, 1764
BsrDI	GCAATG	3 cut(s)	486, 1320, 1798
BsrI	ACTGG	4 cut(s)	383, 518, 1365, 1750
BssECI	CCNNGG	5 cut(s)	177, 585, 1277, 1545, 1557
BssMI	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
BssT1I	CCWWGG	2 cut(s)	177, 1557
Bst2UI	CCWGG	5 cut(s)	961, 966, 1278, 1353, 1775
Bst4CI	ACNGT	5 cut(s)	25, 554, 1037, 1069, 1403
Bst6I	CTCTTC	3 cut(s)	597, 784, 984
BstC8I	GCNNGC	2 cut(s)	437, 1926
BstDEI	CTNAG	9 cut(s)	636, 648, 1073, 1213, 1286, 1383, 1629, 1826, 1952
BstDSI	CCRYGG	2 cut(s)	177, 1557
BstF5I	GGATG	1 cut(s)	1588
BstKTI	GATC	6 cut(s)	259, 994, 1149, 1495, 1504, 1932
BstMAI	GTCTC	4 cut(s)	323, 786, 1189, 1764
BstMBI	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
BstMWI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 983
BstNI	CCWGG	5 cut(s)	961, 966, 1278, 1353, 1775
BstSCI	CCNGG	6 cut(s)	959, 964, 1276, 1351, 1544, 1773
BstSLI	GKGCMC	1 cut(s)	1395
BstV1I	GCAGC	5 cut(s)	200, 256, 331, 457, 1696
BstX2I	RGATCY	1 cut(s)	256
BstYI	RGATCY	1 cut(s)	256
Bsu36I	CCTNAGG	1 cut(s)	636
BsuI	GTATCC	2 cut(s)	951, 1600
BsuRI	GGCC	7 cut(s)	439, 964, 1016, 1276, 1472, 1562, 1692
BtgI	CCRYGG	2 cut(s)	177, 1557
BtgZI	GCGATG	1 cut(s)	477
BtsCI	GGATG	1 cut(s)	1588
BtsIMutI	CAGTG	2 cut(s)	390, 1074
Cac8I	GCNNGC	2 cut(s)	437, 1926
CciI	TCATGA	1 cut(s)	850
Cfr13I	GGNCC	1 cut(s)	1690
Csp6I	GTAC	2 cut(s)	1038, 1065
CviAII	CATG	6 cut(s)	178, 325, 496, 851, 1558, 1862
CviQI	GTAC	2 cut(s)	1038, 1065
DdeI	CTNAG	9 cut(s)	636, 648, 1073, 1213, 1286, 1383, 1629, 1826, 1952
DpnI	GATC	6 cut(s)	258, 993, 1148, 1494, 1503, 1931
DpnII	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
DraIII	CACNNNGTG	1 cut(s)	1429
DrdI	GACNNNNNNGTC	1 cut(s)	842
DseDI	GACNNNNNNGTC	1 cut(s)	842
EaeI	YGGCCR	3 cut(s)	437, 1274, 1560
Eam1104I	CTCTTC	3 cut(s)	597, 784, 984
EarI	CTCTTC	3 cut(s)	597, 784, 984
Ecl136II	GAGCTC	4 cut(s)	374, 1298, 1858, 1877
Eco130I	CCWWGG	2 cut(s)	177, 1557
Eco147I	AGGCCT	1 cut(s)	1472
Eco24I	GRGCYC	4 cut(s)	376, 1300, 1860, 1879
Eco31I	GGTCTC	2 cut(s)	1189, 1764
Eco53kI	GAGCTC	4 cut(s)	374, 1298, 1858, 1877
Eco57I	CTGAAG	2 cut(s)	303, 710
Eco81I	CCTNAGG	1 cut(s)	636
Eco88I	CYCGRG	1 cut(s)	708
EcoICRI	GAGCTC	4 cut(s)	374, 1298, 1858, 1877
EcoRII	CCWGG	5 cut(s)	959, 964, 1276, 1351, 1773
EcoT14I	CCWWGG	2 cut(s)	177, 1557
EcoT22I	ATGCAT	1 cut(s)	488
EcoT38I	GRGCYC	4 cut(s)	376, 1300, 1860, 1879
ErhI	CCWWGG	2 cut(s)	177, 1557
FaeI	CATG	6 cut(s)	181, 328, 499, 854, 1561, 1865
FaqI	GGGAC	2 cut(s)	580, 792
FatI	CATG	6 cut(s)	177, 324, 495, 850, 1557, 1861
FauNDI	CATATG	1 cut(s)	988
FbaI	TGATCA	1 cut(s)	991
Fnu4HI	GCNGC	7 cut(s)	189, 270, 345, 399, 433, 471, 1710
FokI	GGATG	1 cut(s)	1595
FriOI	GRGCYC	4 cut(s)	376, 1300, 1860, 1879
Fsp4HI	GCNGC	7 cut(s)	189, 270, 345, 399, 433, 471, 1710
FspBI	CTAG	9 cut(s)	242, 350, 459, 572, 825, 900, 999, 1568, 1975
GluI	GCNGC	7 cut(s)	189, 270, 345, 399, 433, 471, 1710
GsaI	CCCAGC	1 cut(s)	1312
GsuI	CTGGAG	1 cut(s)	943
HaeIII	GGCC	7 cut(s)	439, 964, 1016, 1276, 1472, 1562, 1692
HapII	CCGG	3 cut(s)	1545, 1653, 1898
Hin1II	CATG	6 cut(s)	181, 328, 499, 854, 1561, 1865
HincII	GTYRAC	2 cut(s)	1292, 1617
HindII	GTYRAC	2 cut(s)	1292, 1617
HindIII	AAGCTT	2 cut(s)	689, 1666
HinfI	GANTC	8 cut(s)	153, 217, 245, 794, 873, 956, 1282, 1624
HpaII	CCGG	3 cut(s)	1545, 1653, 1898
HphI	GGTGA	6 cut(s)	541, 569, 1130, 1546, 1667, 1757
Hpy166II	GTNNAC	4 cut(s)	1153, 1292, 1617, 1658
Hpy188I	TCNGA	6 cut(s)	158, 586, 649, 1216, 1527, 1955
Hpy8I	GTNNAC	4 cut(s)	1153, 1292, 1617, 1658
HpyAV	CCTTC	5 cut(s)	242, 298, 854, 1106, 1157
HpyCH4III	ACNGT	5 cut(s)	25, 554, 1037, 1069, 1403
HpyCH4IV	ACGT	2 cut(s)	455, 1674
HpyF10VI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 983
HpyF3I	CTNAG	9 cut(s)	636, 648, 1073, 1213, 1286, 1383, 1629, 1826, 1952
HpySE526I	ACGT	2 cut(s)	455, 1674
Hsp92II	CATG	6 cut(s)	181, 328, 499, 854, 1561, 1865
Ksp22I	TGATCA	1 cut(s)	991
Kzo9I	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
LguI	GCTCTTC	2 cut(s)	597, 984
LmnI	GCTCC	5 cut(s)	128, 1303, 1863, 1882, 1921
Lsp1109I	GCAGC	5 cut(s)	200, 256, 331, 457, 1696
LweI	GCATC	4 cut(s)	58, 628, 1246, 1968
MaeI	CTAG	9 cut(s)	242, 350, 459, 572, 825, 900, 999, 1568, 1975
MaeII	ACGT	2 cut(s)	455, 1674
MaeIII	GTNAC	4 cut(s)	115, 548, 1031, 1596
MalI	GATC	6 cut(s)	258, 993, 1148, 1494, 1503, 1931
MboI	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	1 cut(s)	256
MhlI	GDGCHC	5 cut(s)	376, 1300, 1395, 1860, 1879
MlsI	TGGCCA	3 cut(s)	439, 1276, 1562
MluNI	TGGCCA	3 cut(s)	439, 1276, 1562
MlyI	GAGTC	2 cut(s)	788, 950
MmeI	TCCRAC	1 cut(s)	106
MnlI	CCTC	9 cut(s)	429, 580, 645, 1109, 1195, 1378, 1573, 1597, 1781
Mox20I	TGGCCA	3 cut(s)	439, 1276, 1562
Mph1103I	ATGCAT	1 cut(s)	488
MscI	TGGCCA	3 cut(s)	439, 1276, 1562
MseI	TTAA	5 cut(s)	144, 654, 750, 1061, 1091
MslI	CAYNNNNRTG	1 cut(s)	1022
Msp20I	TGGCCA	3 cut(s)	439, 1276, 1562
MspA1I	CMGCKG	3 cut(s)	191, 435, 743
MspI	CCGG	3 cut(s)	1545, 1653, 1898
MspR9I	CCNGG	6 cut(s)	961, 966, 1278, 1353, 1546, 1775
MunI	CAATTG	1 cut(s)	1539
Mva1269I	GAATGC	1 cut(s)	926
MvaI	CCWGG	5 cut(s)	961, 966, 1278, 1353, 1775
MwoI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 983
NciI	CCSGG	1 cut(s)	1546
NcoI	CCATGG	2 cut(s)	177, 1557
NdeI	CATATG	1 cut(s)	988
NdeII	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
NlaIII	CATG	6 cut(s)	181, 328, 499, 854, 1561, 1865
NlaIV	GGNNCC	3 cut(s)	402, 1350, 1923
NmeAIII	GCCGAG	1 cut(s)	776
NmuCI	GTSAC	2 cut(s)	115, 1596
NsiI	ATGCAT	1 cut(s)	488
PagI	TCATGA	1 cut(s)	850
PceI	AGGCCT	1 cut(s)	1472
PciSI	GCTCTTC	2 cut(s)	597, 984
PctI	GAATGC	1 cut(s)	926
PfeI	GAWTC	6 cut(s)	153, 217, 245, 873, 1282, 1624
PflMI	CCANNNNNTGG	1 cut(s)	1205
PkrI	GCNGC	7 cut(s)	190, 271, 346, 400, 434, 472, 1711
PleI	GAGTC	2 cut(s)	788, 950
PpsI	GAGTC	2 cut(s)	788, 950
PshBI	ATTAAT	1 cut(s)	750
Psp124BI	GAGCTC	4 cut(s)	376, 1300, 1860, 1879
Psp6I	CCWGG	5 cut(s)	959, 964, 1276, 1351, 1773
PspFI	CCCAGC	1 cut(s)	1308
PspGI	CCWGG	5 cut(s)	959, 964, 1276, 1351, 1773
PspN4I	GGNNCC	3 cut(s)	402, 1350, 1923
PspPI	GGNCC	1 cut(s)	1690
PsuI	RGATCY	1 cut(s)	256
PvuII	CAGCTG	2 cut(s)	191, 743
RsaI	GTAC	2 cut(s)	1039, 1066
RsaNI	GTAC	2 cut(s)	1038, 1065
RseI	CAYNNNNRTG	1 cut(s)	1022
SacI	GAGCTC	4 cut(s)	376, 1300, 1860, 1879
SapI	GCTCTTC	2 cut(s)	597, 984
SaqAI	TTAA	5 cut(s)	144, 654, 750, 1061, 1091
SatI	GCNGC	7 cut(s)	189, 270, 345, 399, 433, 471, 1710
Sau3AI	GATC	6 cut(s)	256, 991, 1146, 1492, 1501, 1929
Sau96I	GGNCC	1 cut(s)	1690
ScaI	AGTACT	1 cut(s)	1039
SchI	GAGTC	2 cut(s)	788, 950
ScrFI	CCNGG	6 cut(s)	961, 966, 1278, 1353, 1546, 1775
SduI	GDGCHC	5 cut(s)	376, 1300, 1395, 1860, 1879
SfaNI	GCATC	4 cut(s)	58, 628, 1246, 1968
SmiMI	CAYNNNNRTG	1 cut(s)	1022
SmlI	CTYRAG	2 cut(s)	840, 1601
SmoI	CTYRAG	2 cut(s)	840, 1601
SpeI	ACTAGT	2 cut(s)	824, 899
SseBI	AGGCCT	1 cut(s)	1472
SsiI	CCGC	2 cut(s)	398, 433
SspMI	CTAG	9 cut(s)	242, 350, 459, 572, 825, 900, 999, 1568, 1975
SstI	GAGCTC	4 cut(s)	376, 1300, 1860, 1879
StuI	AGGCCT	1 cut(s)	1472
StyD4I	CCNGG	6 cut(s)	959, 964, 1276, 1351, 1544, 1773
StyI	CCWWGG	2 cut(s)	177, 1557
TaaI	ACNGT	5 cut(s)	25, 554, 1037, 1069, 1403
TaiI	ACGT	2 cut(s)	458, 1677
TaqI	TCGA	3 cut(s)	151, 370, 982
TatI	WGTACW	2 cut(s)	1037, 1064
TauI	GCSGC	2 cut(s)	401, 435
TfiI	GAWTC	6 cut(s)	153, 217, 245, 873, 1282, 1624
Tru1I	TTAA	5 cut(s)	144, 654, 750, 1061, 1091
Tru9I	TTAA	5 cut(s)	144, 654, 750, 1061, 1091
TscAI	CASTG	2 cut(s)	390, 1074
TseFI	GTSAC	2 cut(s)	115, 1596
TseI	GCWGC	5 cut(s)	188, 269, 344, 470, 1709
Tsp45I	GTSAC	2 cut(s)	115, 1596
TspDTI	ATGAA	6 cut(s)	55, 224, 381, 494, 706, 1476
TspGWI	ACGGA	1 cut(s)	1800
TspRI	CASTG	2 cut(s)	390, 1074
Van91I	CCANNNNNTGG	1 cut(s)	1205
VspI	ATTAAT	1 cut(s)	750
XapI	RAATTY	5 cut(s)	378, 969, 1416, 1463, 1681
XbaI	TCTAGA	2 cut(s)	241, 1567
XspI	CTAG	9 cut(s)	242, 350, 459, 572, 825, 900, 999, 1568, 1975
ZrmI	AGTACT	1 cut(s)	1039
Zsp2I	ATGCAT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.