Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

87691160 .. 87704703

Gene Structure 13544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00066180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGCTTTTCCTTGTAAGTTGATCTTTAACAAAATCGAAAGACTTTGGCATCCGCTTCCTCTGCTCATCATAATCATCATTATCACTATCTCTGATGGAGCTGAAACTGAAAATGAGAAAATTGTCACCAATCTTGGAGCAATCGTTAATCTGAACTCTCGAATGGGTAAAGAACAGAAAACTGCTATGGATATTGCAGCTGAAAACTTCAGCAACCTTTCAAAGACTCATAGCCTAATCATTCATTTTCGACATTCTGACAGAGATCCCTTAACAGCTGCTTCTGCTGCTGAAGAGTTGATAAAAGAAAAGAAGGTAAAAGTGCTAATTGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCCGATGTGGGGAACCGAGCTCAAGTTCCGGTGATTTCTTTTGCAGCACCTACTATCACACCACCTCTAGTGCAACGCAAATGGCCATTTTTGATACGAGTGGCAAGCGATGCTGCTGCTCAAATGAAATGTATCGCTGATATAGTTTCTTTGTACAGTTGGAAAAGGGTTATTGCAATATACGAGGATGATGGTTATGGTGGTGATGCTGGGATGCTAGCTCTTTTATCTGAGGCTCTCCAAAATGTTGGTTCAAAGATTGAGCATCATTTGGTTCTCCCACGGGTTTCTTCTCTGTCTGGTCCTAATTGGGGTGAACTAGAAGAGATGTTGAAGCTTCCTAGCTTTCAATCTCGGGTGTTCATTGTGCTTCAGTCTTCTTTGCCAACGGTAACTAATCTATTCAGGGTGGCAAAGAAGATGGGACTTGTAGGAAGAGACTCGGCTTGGATAATCACGGAGAGTATTACTAGTTTACTTGACCCTCAAGTCAATCATGATATGGAAGGTACTCTGGGAATCAAGACCAACTATGCCAATAATACCAGTTCCTATGCCAAGTTCAACAAGGTATTCAAAGAAATGTATCCAGAAAAAGATAACTCCGCGCCAGGAATTCATGCTCTTCGAGCATATGATATGACTAGAATCGTAACACAGGCCATAAGAATGACTAGTAACACTACCACTAACCTTCAGGTAGTGTTAAATACAGTGCTAGGCAATTACATGGGTTTGAGTGGGAAAATTTTTATTGAAGGAGGTGAAGTCTTTTACTCTCCCATATTCAGGATCATTAACATTGTGGAAGGTAACAGTTACAAAGAGTTGAACTTTTGGAGAACAGAGGTTGGGTTCTCAGAAAGCCTTCCACAAGAAACAAGCATATACAGAAGTGATGGTGTTGGTACAGTAGTTTGGCCGGGGAAACTAAGTGAAAGAGCCCCAAAAGGCTGGGCAATGCCTACTGCTGATAAGCCAATGAGAATTGGGGTTCCAGGTAGAGCTTCCTTCCCTGCATTTGTAAAGGTTGGTTCGAAGAAAAACTCAGCTGAGAAGAGTTATGAAGGTTTCTGCATTCAAATTTTCCAAATGGTGCAAAGTCGTTTGAATTATCCTCTGCCCTTTGAATTCCGGGCCGTTGATGGCCCCTATGATGATCTGGTAGAACTAGTCCATAACAAGACTTTGGATGCTGCCATTGGTGATATTACCATACTAGCAGACCGATTGAAGAAAGTGGAATTCACTCAGCCATATATCGAGTCCGGTTTGTCAATCATAGTTCCAGAAATCCCTAAGCAATCAGCATGGATGTTTCTAAAACCTTTCACTGGGAAAATGTGGGCTGCGACTTGTGGCATATTAGTCTACACAATCTTGATTATATGGTTTCTGGAGCGCCCATCTAATCCAGAATTTAGTGGCCCGTTGAAGAATCAGATTGGCACAGCAACTTGGTTCGCCTTCACCTCTTTGTTCTTTTCTCACAGCTCAAGCTACACCGCTAATCTGTCTTCCATACTGACCATTCAACGATTGAAACCAAATGTAACAGACATCGAAACGCTACTGAGAACCAACTCAAGAGTTGGCTTGAATAGGCCTTCATTTGTCTACAATTACTTGGTGGATGTACTTAAATTCAAACCAGAGAACATCATCAAAATAGGCAGCGAATCCAACTATACTGAGGAATTCAAAATCAAGAGTATATCTGCTGCCTTTCTTGAACTCCCATATGCGAAAGTATTCATGAACCAGTACTGCAAGGGATATACTGCGACCACACCCTTCTACAGATTTGGAGGGCTAGGCTTTGTATTTCAGAAAGGCTCTCCAATTGCCTGGGATTTCAGCAAGGCCATTCTAGAGTTATTGGAGGATGGAGAACTGAAGTCACTTGAAGATACTTGGTTGACACCACATCGTGATTGTCCAAACAATGCAACTTCAGACACACCAGACAGCTTGAACGTCAAGAATTTTTGGGGCCTATATGTAATATCGGGTGCTACTTCCACCGTTTGCCTTCTATTATCCTTCACTATTTTTCTGAGGAAGTTTCAACAACACCAGGAAGCATACCGAGGCAATGCAAGTGATGAAAGTGTTTGGAACAAGACAGTTAGAATGGCAAGATTCCTATATAATATAGAGCACAATGTTTCTAGTAGAGCTTCAAGTTTTGTTGATGTGCTGGAATTGACTTCTTCCCCATGGGAGCGCGCGATCACTTCCACCCCTCTTCAGGCCTCCACACCCGCACAAACTGAAGGCTCTCCACCACATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

886

Amino Acids

99.08

Weight (kDa)

7.6

Isoelectric Point (pI)

33.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	60 - 373	6.9e-36	Receptor family ligand binding region
Peripla_BP_6	PF13458	88 - 355	9e-16	Periplasmic binding protein
Lig_chan-Glu_bd	PF10613	467 - 551	9.8e-10	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	472 - 762	1.7e-14	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	620 - 793	3e-09	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	851
AccI	GTMKAC	2 cut(s)	1734, 1980
AccII	CGCG	3 cut(s)	971, 2592, 2594
AciI	CCGC	4 cut(s)	53, 969, 1869, 2628
AclWI	GGATC	2 cut(s)	260, 1163
AcoI	YGGCCR	2 cut(s)	446, 1283
AcsI	RAATTY	9 cut(s)	978, 1110, 1446, 1493, 1607, 1781, 2006, 2060, 2347
AcuI	CTGAAG	8 cut(s)	193, 312, 719, 1043, 2279, 2301, 2597, 2658
AdeI	CACNNNGTG	1 cut(s)	2294
AfaI	GTAC	5 cut(s)	518, 874, 1273, 2001, 2129
AfiI	CCNNNNNNNGG	5 cut(s)	372, 674, 1152, 1697, 2614
AhlI	ACTAGT	3 cut(s)	833, 1037, 1534
AjnI	CCWGG	4 cut(s)	973, 1360, 2210, 2439
Alw21I	GWGCWC	2 cut(s)	385, 2526
Alw26I	GTCTC	2 cut(s)	332, 795
AlwI	GGATC	2 cut(s)	260, 1163
Ama87I	CYCGRG	1 cut(s)	717
ApoI	RAATTY	9 cut(s)	978, 1110, 1446, 1493, 1607, 1781, 2006, 2060, 2347
Asp700I	GAANNNNTTC	2 cut(s)	1230, 2114
AspLEI	GCGC	4 cut(s)	973, 1767, 2592, 2594
AspS9I	GGNCC	5 cut(s)	665, 1500, 1511, 1790, 2356
AsuC2I	CCSGG	2 cut(s)	1287, 1499
AsuHPI	GGTGA	7 cut(s)	118, 406, 578, 689, 1139, 1580, 1825
AsuII	TTCGAA	1 cut(s)	1400
AsuNHI	GCTAGC	1 cut(s)	580
AvaI	CYCGRG	1 cut(s)	717
AvaII	GGWCC	1 cut(s)	665
BaeI	ACNNNNGTAYC	2 cut(s)	1263, 1296
BalI	TGGCCA	1 cut(s)	448
BanII	GRGCYC	2 cut(s)	385, 1309
BbsI	GAAGAC	2 cut(s)	732, 1872
Bbv12I	GWGCWC	2 cut(s)	385, 2526
BccI	CCATC	7 cut(s)	89, 548, 778, 1256, 1502, 1777, 2243
BceAI	ACGGC	1 cut(s)	1487
BcgI	CGANNNNNNTGC	2 cut(s)	461, 495
BciT130I	CCWGG	4 cut(s)	975, 1362, 2212, 2441
BciVI	GTATCC	1 cut(s)	960
BcnI	CCSGG	2 cut(s)	1287, 1499
BcoDI	GTCTC	2 cut(s)	332, 795
BcuI	ACTAGT	3 cut(s)	833, 1037, 1534
BfmI	CTRYAG	1 cut(s)	2161
BfoI	RGCGCY	1 cut(s)	1768
BfuI	GTATCC	1 cut(s)	960
BmcAI	AGTACT	1 cut(s)	2129
Bme1390I	CCNGG	6 cut(s)	975, 1287, 1362, 1499, 2212, 2441
Bme18I	GGWCC	1 cut(s)	665
BmeT110I	CYCGRG	1 cut(s)	717
BmgT120I	GGNCC	5 cut(s)	665, 1500, 1511, 1790, 2356
BmiI	GGNNCC	4 cut(s)	377, 1359, 1513, 2357
BmrFI	CCNGG	6 cut(s)	975, 1287, 1362, 1499, 2212, 2441
BmrI	ACTGGG	1 cut(s)	1707
BmsI	GCATC	6 cut(s)	58, 463, 559, 567, 637, 1546
BmtI	GCTAGC	1 cut(s)	584
BmuI	ACTGGG	1 cut(s)	1707
BpiI	GAAGAC	2 cut(s)	732, 1872
BpmI	CTGGAG	1 cut(s)	1781
Bpu10I	CCTNAGC	1 cut(s)	1662
Bpu14I	TTCGAA	1 cut(s)	1400
BpuEI	CTTGAG	4 cut(s)	369, 834, 1843, 1933
BpuMI	CCSGG	2 cut(s)	1287, 1499
BsaJI	CCNNGG	5 cut(s)	644, 1286, 2211, 2452, 2582
BsaWI	WCCGGW	2 cut(s)	391, 1631
BsaXI	ACNNNNNCTCC	4 cut(s)	129, 159, 1116, 1146
Bsc4I	CCNNNNNNNGG	5 cut(s)	372, 674, 1152, 1697, 2614
Bse1I	ACTGG	3 cut(s)	909, 1702, 2125
Bse3DI	GCAATG	2 cut(s)	1329, 2464
BseBI	CCWGG	4 cut(s)	975, 1362, 2212, 2441
BseDI	CCNNGG	5 cut(s)	644, 1286, 2211, 2452, 2582
BseGI	GGATG	7 cut(s)	49, 556, 582, 1561, 1683, 2002, 2254
BseLI	CCNNNNNNNGG	5 cut(s)	372, 674, 1152, 1697, 2614
BseMI	GCAATG	2 cut(s)	1329, 2464
BseMII	CTCAG	8 cut(s)	585, 1236, 1407, 1425, 1628, 1928, 2046, 2411
BseNI	ACTGG	3 cut(s)	909, 1702, 2125
BsePI	GCGCGC	1 cut(s)	2590
BseYI	CCCAGC	2 cut(s)	572, 1317
Bsh1236I	CGCG	3 cut(s)	971, 2592, 2594
BsiHKAI	GWGCWC	2 cut(s)	385, 2526
BsiHKCI	CYCGRG	1 cut(s)	717
BsiSI	CCGG	4 cut(s)	392, 1286, 1498, 1632
BslFI	GGGAC	1 cut(s)	801
BslI	CCNNNNNNNGG	5 cut(s)	372, 674, 1152, 1697, 2614
BsmAI	GTCTC	2 cut(s)	332, 795
BsmFI	GGGAC	1 cut(s)	801
BsmI	GAATGC	1 cut(s)	1440
BsoBI	CYCGRG	1 cut(s)	717
Bsp119I	TTCGAA	1 cut(s)	1400
Bsp1286I	GDGCHC	3 cut(s)	385, 1309, 2526
Bsp1407I	TGTACA	1 cut(s)	516
Bsp143I	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
Bsp19I	CCATGG	1 cut(s)	2582
BspACI	CCGC	4 cut(s)	53, 969, 1869, 2628
BspCNI	CTCAG	8 cut(s)	586, 1235, 1408, 1424, 1627, 1929, 2047, 2412
BspFNI	CGCG	3 cut(s)	971, 2592, 2594
BspHI	TCATGA	2 cut(s)	859, 2118
BspLI	GGNNCC	4 cut(s)	377, 1359, 1513, 2357
BspOI	GCTAGC	1 cut(s)	584
BspPI	GGATC	2 cut(s)	260, 1163
BspQI	GCTCTTC	1 cut(s)	993
BspT104I	TTCGAA	1 cut(s)	1400
BsrDI	GCAATG	2 cut(s)	1329, 2464
BsrGI	TGTACA	1 cut(s)	516
BsrI	ACTGG	3 cut(s)	909, 1702, 2125
BssECI	CCNNGG	5 cut(s)	644, 1286, 2211, 2452, 2582
BssHII	GCGCGC	1 cut(s)	2590
BssMI	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
BssT1I	CCWWGG	1 cut(s)	2582
Bst2UI	CCWGG	4 cut(s)	975, 1362, 2212, 2441
Bst4CI	ACNGT	7 cut(s)	521, 754, 1078, 1181, 1276, 2389, 2491
Bst6I	CTCTTC	6 cut(s)	288, 681, 793, 993, 1415, 2616
BstAPI	GCANNNNNTGC	1 cut(s)	473
BstAUI	TGTACA	1 cut(s)	516
BstBI	TTCGAA	1 cut(s)	1400
BstC8I	GCNNGC	3 cut(s)	469, 582, 2592
BstDSI	CCRYGG	2 cut(s)	644, 2582
BstF5I	GGATG	7 cut(s)	49, 556, 582, 1561, 1683, 2002, 2254
BstFNI	CGCG	3 cut(s)	971, 2592, 2594
BstH2I	RGCGCY	1 cut(s)	1768
BstHHI	GCGC	4 cut(s)	973, 1767, 2592, 2594
BstKTI	GATC	5 cut(s)	24, 268, 1158, 1525, 2598
BstMAI	GTCTC	2 cut(s)	332, 795
BstMBI	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 284, 287, 362, 473, 992
BstNI	CCWGG	4 cut(s)	975, 1362, 2212, 2441
BstSCI	CCNGG	6 cut(s)	973, 1285, 1360, 1497, 2210, 2439
BstSFI	CTRYAG	1 cut(s)	2161
BstUI	CGCG	3 cut(s)	971, 2592, 2594
BstV2I	GAAGAC	2 cut(s)	732, 1872
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	3 cut(s)	611, 1317, 2211
BstYI	RGATCY	1 cut(s)	265
BsuI	GTATCC	1 cut(s)	960
BtgI	CCRYGG	2 cut(s)	644, 2582
BtgZI	GCGATG	1 cut(s)	486
BtsCI	GGATG	7 cut(s)	49, 556, 582, 1561, 1683, 2002, 2254
BtsIMutI	CAGTG	2 cut(s)	1083, 1695
Cac8I	GCNNGC	3 cut(s)	469, 582, 2592
CciI	TCATGA	2 cut(s)	859, 2118
CfoI	GCGC	4 cut(s)	973, 1767, 2592, 2594
Cfr13I	GGNCC	5 cut(s)	665, 1500, 1511, 1790, 2356
Csp6I	GTAC	5 cut(s)	517, 873, 1272, 2000, 2128
CviAII	CATG	8 cut(s)	334, 860, 983, 1093, 1674, 2119, 2583, 2654
CviQI	GTAC	5 cut(s)	517, 873, 1272, 2000, 2128
DpnI	GATC	5 cut(s)	23, 267, 1157, 1524, 2597
DpnII	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
DraIII	CACNNNGTG	1 cut(s)	2294
DrdI	GACNNNNNNGTC	1 cut(s)	851
DseDI	GACNNNNNNGTC	1 cut(s)	851
EaeI	YGGCCR	2 cut(s)	446, 1283
Eam1104I	CTCTTC	6 cut(s)	288, 681, 793, 993, 1415, 2616
EarI	CTCTTC	6 cut(s)	288, 681, 793, 993, 1415, 2616
Ecl136II	GAGCTC	1 cut(s)	383
Eco130I	CCWWGG	1 cut(s)	2582
Eco147I	AGGCCT	2 cut(s)	1969, 2618
Eco24I	GRGCYC	2 cut(s)	385, 1309
Eco47I	GGWCC	1 cut(s)	665
Eco53kI	GAGCTC	1 cut(s)	383
Eco57I	CTGAAG	8 cut(s)	193, 312, 719, 1043, 2279, 2301, 2597, 2658
Eco88I	CYCGRG	1 cut(s)	717
EcoICRI	GAGCTC	1 cut(s)	383
EcoO109I	RGGNCCY	1 cut(s)	2356
EcoRI	GAATTC	4 cut(s)	978, 1493, 1607, 2060
EcoRII	CCWGG	4 cut(s)	973, 1360, 2210, 2439
EcoT14I	CCWWGG	1 cut(s)	2582
EcoT38I	GRGCYC	2 cut(s)	385, 1309
ErhI	CCWWGG	1 cut(s)	2582
FaeI	CATG	8 cut(s)	337, 863, 986, 1096, 1677, 2122, 2586, 2657
FalI	AAGNNNNNCTT	2 cut(s)	8, 40
FaqI	GGGAC	1 cut(s)	801
FatI	CATG	8 cut(s)	333, 859, 982, 1092, 1673, 2118, 2582, 2653
FauI	CCCGC	1 cut(s)	2635
FauNDI	CATATG	2 cut(s)	997, 2104
FblI	GTMKAC	2 cut(s)	1734, 1980
FokI	GGATG	7 cut(s)	36, 563, 589, 1568, 1690, 2009, 2261
FriOI	GRGCYC	2 cut(s)	385, 1309
GlaI	GCGC	4 cut(s)	972, 1766, 2591, 2593
GsaI	CCCAGC	2 cut(s)	576, 1321
GsuI	CTGGAG	1 cut(s)	1781
HaeII	RGCGCY	1 cut(s)	1768
HapII	CCGG	4 cut(s)	392, 1286, 1498, 1632
HhaI	GCGC	4 cut(s)	973, 1767, 2592, 2594
Hin1II	CATG	8 cut(s)	337, 863, 986, 1096, 1677, 2122, 2586, 2657
Hin6I	GCGC	4 cut(s)	971, 1765, 2590, 2592
HinP1I	GCGC	4 cut(s)	971, 1765, 2590, 2592
HincII	GTYRAC	1 cut(s)	2283
HindII	GTYRAC	1 cut(s)	2283
HindIII	AAGCTT	1 cut(s)	698
HinfI	GANTC	8 cut(s)	226, 803, 882, 1011, 1628, 1801, 2042, 2505
HpaII	CCGG	4 cut(s)	392, 1286, 1498, 1632
HphI	GGTGA	7 cut(s)	118, 406, 578, 689, 1139, 1580, 1825
Hpy166II	GTNNAC	5 cut(s)	680, 839, 1735, 1981, 2283
Hpy188I	TCNGA	9 cut(s)	94, 153, 259, 595, 1225, 1806, 2193, 2320, 2421
Hpy8I	GTNNAC	5 cut(s)	680, 839, 1735, 1981, 2283
HpyCH4III	ACNGT	7 cut(s)	521, 754, 1078, 1181, 1276, 2389, 2491
HpyCH4IV	ACGT	1 cut(s)	2340
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 284, 287, 362, 473, 992
HpySE526I	ACGT	1 cut(s)	2340
Hsp92II	CATG	8 cut(s)	337, 863, 986, 1096, 1677, 2122, 2586, 2657
HspAI	GCGC	4 cut(s)	971, 1765, 2590, 2592
Kzo9I	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
LguI	GCTCTTC	1 cut(s)	993
LmnI	GCTCC	4 cut(s)	98, 137, 1762, 2587
LweI	GCATC	6 cut(s)	58, 463, 559, 567, 637, 1546
MaeII	ACGT	1 cut(s)	2340
MaeIII	GTNAC	8 cut(s)	124, 754, 1015, 1040, 1175, 1181, 1915, 2262
MalI	GATC	5 cut(s)	23, 267, 1157, 1524, 2597
MboI	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
MfeI	CAATTG	1 cut(s)	2205
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	3 cut(s)	385, 1309, 2526
MlsI	TGGCCA	1 cut(s)	448
MluNI	TGGCCA	1 cut(s)	448
MlyI	GAGTC	3 cut(s)	220, 797, 1637
MmeI	TCCRAC	2 cut(s)	503, 2070
Mox20I	TGGCCA	1 cut(s)	448
MroXI	GAANNNNTTC	2 cut(s)	1230, 2114
MscI	TGGCCA	1 cut(s)	448
MseI	TTAA	6 cut(s)	27, 147, 272, 1070, 1161, 2004
MslI	CAYNNNNRTG	1 cut(s)	1031
Msp20I	TGGCCA	1 cut(s)	448
MspA1I	CMGCKG	3 cut(s)	200, 278, 1415
MspI	CCGG	4 cut(s)	392, 1286, 1498, 1632
MspR9I	CCNGG	6 cut(s)	975, 1287, 1362, 1499, 2212, 2441
MunI	CAATTG	1 cut(s)	2205
Mva1269I	GAATGC	1 cut(s)	1440
MvaI	CCWGG	4 cut(s)	975, 1362, 2212, 2441
MvnI	CGCG	3 cut(s)	971, 2592, 2594
MwoI	GCNNNNNNNGC	6 cut(s)	61, 284, 287, 362, 473, 992
NciI	CCSGG	2 cut(s)	1287, 1499
NcoI	CCATGG	1 cut(s)	2582
NdeI	CATATG	2 cut(s)	997, 2104
NdeII	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
NheI	GCTAGC	1 cut(s)	580
NlaIII	CATG	8 cut(s)	337, 863, 986, 1096, 1677, 2122, 2586, 2657
NlaIV	GGNNCC	4 cut(s)	377, 1359, 1513, 2357
NmeAIII	GCCGAG	1 cut(s)	785
NmuCI	GTSAC	2 cut(s)	124, 2262
NspV	TTCGAA	1 cut(s)	1400
PagI	TCATGA	2 cut(s)	859, 2118
PauI	GCGCGC	1 cut(s)	2590
PceI	AGGCCT	2 cut(s)	1969, 2618
PciSI	GCTCTTC	1 cut(s)	993
PctI	GAATGC	1 cut(s)	1440
PdmI	GAANNNNTTC	2 cut(s)	1230, 2114
PfeI	GAWTC	5 cut(s)	882, 1011, 1801, 2042, 2505
PleI	GAGTC	3 cut(s)	220, 797, 1636
PpsI	GAGTC	3 cut(s)	220, 797, 1636
Psp124BI	GAGCTC	1 cut(s)	385
Psp6I	CCWGG	4 cut(s)	973, 1360, 2210, 2439
PspFI	CCCAGC	2 cut(s)	572, 1317
PspGI	CCWGG	4 cut(s)	973, 1360, 2210, 2439
PspN4I	GGNNCC	4 cut(s)	377, 1359, 1513, 2357
PspPI	GGNCC	5 cut(s)	665, 1500, 1511, 1790, 2356
PsuI	RGATCY	1 cut(s)	265
PteI	GCGCGC	1 cut(s)	2590
PvuII	CAGCTG	3 cut(s)	200, 278, 1415
RsaI	GTAC	5 cut(s)	518, 874, 1273, 2001, 2129
RsaNI	GTAC	5 cut(s)	517, 873, 1272, 2000, 2128
RseI	CAYNNNNRTG	1 cut(s)	1031
SacI	GAGCTC	1 cut(s)	385
SapI	GCTCTTC	1 cut(s)	993
SaqAI	TTAA	6 cut(s)	27, 147, 272, 1070, 1161, 2004
Sau3AI	GATC	5 cut(s)	21, 265, 1155, 1522, 2595
Sau96I	GGNCC	5 cut(s)	665, 1500, 1511, 1790, 2356
ScaI	AGTACT	1 cut(s)	2129
SchI	GAGTC	3 cut(s)	220, 797, 1637
ScrFI	CCNGG	6 cut(s)	975, 1287, 1362, 1499, 2212, 2441
SduI	GDGCHC	3 cut(s)	385, 1309, 2526
SfaNI	GCATC	6 cut(s)	58, 463, 559, 567, 637, 1546
SfcI	CTRYAG	1 cut(s)	2161
SfuI	TTCGAA	1 cut(s)	1400
SinI	GGWCC	1 cut(s)	665
SmiMI	CAYNNNNRTG	1 cut(s)	1031
SmlI	CTYRAG	4 cut(s)	384, 849, 1858, 1948
SmoI	CTYRAG	4 cut(s)	384, 849, 1858, 1948
SpeI	ACTAGT	3 cut(s)	833, 1037, 1534
SseBI	AGGCCT	2 cut(s)	1969, 2618
SsiI	CCGC	4 cut(s)	53, 969, 1869, 2628
SstI	GAGCTC	1 cut(s)	385
StuI	AGGCCT	2 cut(s)	1969, 2618
StyD4I	CCNGG	6 cut(s)	973, 1285, 1360, 1497, 2210, 2439
StyI	CCWWGG	1 cut(s)	2582
TaaI	ACNGT	7 cut(s)	521, 754, 1078, 1181, 1276, 2389, 2491
TaiI	ACGT	1 cut(s)	2343
TaqI	TCGA	7 cut(s)	36, 160, 250, 991, 1400, 1626, 1926
TaqII	GACCGA	1 cut(s)	1605
TatI	WGTACW	3 cut(s)	516, 1999, 2127
TfiI	GAWTC	5 cut(s)	882, 1011, 1801, 2042, 2505
Tru1I	TTAA	6 cut(s)	27, 147, 272, 1070, 1161, 2004
Tru9I	TTAA	6 cut(s)	27, 147, 272, 1070, 1161, 2004
TscAI	CASTG	2 cut(s)	1083, 1702
TseFI	GTSAC	2 cut(s)	124, 2262
Tsp45I	GTSAC	2 cut(s)	124, 2262
TspDTI	ATGAA	9 cut(s)	233, 503, 715, 971, 1443, 1962, 2107, 2135, 2484
TspGWI	ACGGA	1 cut(s)	836
TspRI	CASTG	2 cut(s)	1083, 1702
VpaK11BI	GGWCC	1 cut(s)	665
XapI	RAATTY	9 cut(s)	978, 1110, 1446, 1493, 1607, 1781, 2006, 2060, 2347
XbaI	TCTAGA	1 cut(s)	2233
XmiI	GTMKAC	2 cut(s)	1734, 1980
XmnI	GAANNNNTTC	2 cut(s)	1230, 2114
ZrmI	AGTACT	1 cut(s)	2129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.