RLG00000031706

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
7638049 .. 7641446
3398 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031706

Sequence Viewer

Length: 2289 bp
ATGTCCACATCCGAGTGCGAGGGAGTTGCAGTTCAAAATGAAAAAATTGTCACTAACGTTGGAGCAATCATTAATGCTGATTCCCGTATCGGCAAAGAACAGAAAGCTGCCATGAAAATTGCAGCTGAAAGCTTCAACAACAAGTCCGGCAACACTCGTGAACTAATCCTTCATTTTCAAGACTCCGGGGGAGATCCCTTTCTTGCTGCTTCTGAGGTTGAAGAGTTGATAAAGGAAAAGAAAGTAGAAGTGATAGTTGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATCATGTGGGAAACCAATCTAAAAAAATTCCGGTAATTTCATTTGCAGCACCAGCCATAACCGTGCCACTAATGCAACAGCGTTGGCCATTTCTGATACGAATGGCAAGCAATGGATCTGCTCAGATGAAATGCATTGCAGATATAGTTTCTGCATACAAGTGGAAAAGGGTCGTTGTGATATACGAAGACGACGGTTATGGTGGTCAAGTTGGGTTGCTAGCTCTTTTATCTGAGGCTCTTCAAGATGCAAATGCAAAGATTGAGAATCATTTGGTTCTTCCGAGACTAAATAATTCTTCGATGGCTAAGCCTAATTGGGATGAAGTAGAAGAGCTGTTGAAGCTTCCCACCTTTCAGTCTCGGGTGTTTATTGTTCTTCAATCATCTTTACCAACAGTGACTAATCTGTTCAGCGTGGCTAGGAAGATGGGACTTGTAGGGAGAGAGTCGGCTTGGATAATCACAGAATGTATCACCAGTTTGCTTGACCCTCAAGGTGACGACTCTATGGAAGGAACTCTGGGAATCAAGACCGACTACGCCACTGAGTCTAGTTCTTATGCTGAATTCCAGAAGGAATTCCAAGCTAAGTATGCAGAAGAAAATAACTTCAAGCCAGGAATTTATGCTCTTCGAGCATACGACACTATTACTGTCATTTCAAAGGCCTTAGAAAGGATGCCTAATAACACCACTAGTACTAGCCTTCAGAATATGATAACTACTTTGTTGAGCAATTACAAGGGTTTAAGTGGGATTATGCACTTGAAAGAAGGTGCAGCACTGTTGGATTCTCTGAGATTCAGGATCATAAATGTCGTGGATGGGAAGACGAACAAAGAGTTAAACTTTTGGTCACCAGAGGTTGGGTTCTCCGAAGGCCTAGGCTGGGCAGCCTCACACGAGAACCTCACACGTACGCCTCAAGGCTGGGGAATGCCTACTGCTGGGAAGCCAATGAAATTTGGGGTTCCAGCTGGTAACAAGCACTTCGGTAAATTTGTAAAGGTTGAGCCCAGAAACAATTCATCATATGACTTCTCATATGACGGTTTCTCCATTAGAATTTTCTACACGGTACTAACTCATTTGAATTATCATCTACCATTTGAATTTGTACCCTTTAACGGTTCTTACGATGATTTGGTAGAAGGAGTTTATAACAAGGTAAAAATTTCAGCTTTATTTTCTTTCAATGTCCATCTTTTAGTACATACACACACATACTTGTATTTCTCGTTCTTATATACCAACTTTGCTCGGGTAGTATTTCTTCTGTGGCTATTTATTGTATTGATCTTGAGCTCAAGCTACACTGCTAGTCTTTCTTCCATGCTTACCACCCAACGACCGACCTTAAATGTAACAACTGAAATGTTAAACAACACTGATGCAAAAGTTGGTTGGGATGGAGGCCCATTTGTCTCAAAGTATCTGTCAGATACCTATAAATTCGATGCTAACAACAGAATCAATGTAAGCAGCGAAAACAGCTACACTGATGCATTCAAAAACAAAAATATAACTGCTATGTTTCTTGAACTCCCATATGCTCAAGTCTACATGAACGAGCTCTGTGAGGGATATACTTCAATCACACAACCCTACGAATTTGGAGGATTTAGCTTTATATTCCAGAAAGGCTCTCCAATAGCTAGGGATTTCTCTAAGGCCATTCTAGAGCTATTGGAGAATGGATATATCAAGCAACTTCAAAATGAATTATTGACTCCCGAGAAGCAGTGTGCAAACACTAATAGTAGACCAAAAAGCTTGAGCCTTAATAGCTTTTCGGGTCTCTATGTAATATGCGGTGCTGCTTCCACCCTGTGTCTTTTACTATCTTTTACCCCATGTGTGAGGAAGTCTCAGAAGCAAGAAAAGCACGAAGGCAATGCAGGTCCAAGTGATGAATGTCTCCTTCGATCCCAACACTCCAACAGTCCGCAGGCCTTCACATCCGTAGAAATCGAATGCGTGCCGCAGAGATGA

Protein Analysis

763

Amino Acids

84.92

Weight (kDa)

6.0

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 30 - 341 2e-19 Periplasmic binding protein
ANF_receptor PF01094 35 - 372 2.8e-41 Receptor family ligand binding region
Lig_chan PF00060 486 - 706 1.9e-13 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1458
Acc36I ACCTGC 1 cut(s) 2186
AccB7I CCANNNNNTGG 1 cut(s) 1163
AccI GTMKAC 2 cut(s) 1857, 2059
AciI CCGC 3 cut(s) 2109, 2243, 2279
AclI AACGTT 1 cut(s) 57
AclWI GGATC 4 cut(s) 188, 418, 1112, 2217
AcoI YGGCCR 1 cut(s) 380
AcuI CTGAAG 1 cut(s) 989
AdeI CACNNNGTG 1 cut(s) 2127
AfaI GTAC 5 cut(s) 997, 1216, 1377, 1416, 1509
AfiI CCNNNNNNNGG 5 cut(s) 972, 1163, 1186, 1244, 1424
AflIII ACRYGT 1 cut(s) 1211
AhlI ACTAGT 1 cut(s) 992
AjnI CCWGG 1 cut(s) 913
AjuI GAANNNNNNNTTGG 2 cut(s) 240, 272
AloI GAACNNNNNNTCC 2 cut(s) 15, 47
Alw21I GWGCWC 2 cut(s) 1604, 1872
Alw26I GTCTC 7 cut(s) 260, 574, 660, 1726, 2099, 2169, 2219
AlwI GGATC 4 cut(s) 188, 418, 1112, 2217
Ama87I CYCGRG 3 cut(s) 657, 1557, 2030
AoxI GGCC 6 cut(s) 380, 963, 1177, 1711, 1968, 2247
ApeKI GCWGC 9 cut(s) 107, 122, 206, 281, 341, 1076, 1190, 1779, 2114
ArsI GACNNNNNNTTYG 2 cut(s) 1718, 1750
AseI ATTAAT 1 cut(s) 72
Asp700I GAANNNNTTC 2 cut(s) 875, 1321
AspA2I CCTAGG 1 cut(s) 1180
AspS9I GGNCC 2 cut(s) 1712, 2198
AsuC2I CCSGG 1 cut(s) 187
AsuHPI GGTGA 3 cut(s) 763, 806, 1146
AsuNHI GCTAGC 1 cut(s) 514
AvaI CYCGRG 3 cut(s) 657, 1557, 2030
AvaII GGWCC 1 cut(s) 2198
AvrII CCTAGG 1 cut(s) 1180
BalI TGGCCA 1 cut(s) 382
BanII GRGCYC 3 cut(s) 1314, 1604, 1872
BarI GAAGNNNNNNTAC 2 cut(s) 1554, 1586
BauI CACGAG 2 cut(s) 156, 1199
BbsI GAAGAC 2 cut(s) 489, 1133
Bbv12I GWGCWC 2 cut(s) 1604, 1872
BbvI GCAGC 9 cut(s) 94, 134, 193, 293, 353, 1088, 1202, 1791, 2101
BccI CCATC 5 cut(s) 592, 718, 1115, 1506, 1700
BcgI CGANNNNNNTGC 4 cut(s) 8, 42, 2174, 2208
BciT130I CCWGG 1 cut(s) 915
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 187
BcoDI GTCTC 7 cut(s) 260, 574, 660, 1726, 2099, 2169, 2219
BcuI ACTAGT 1 cut(s) 992
BfuAI ACCTGC 1 cut(s) 2186
BlnI CCTAGG 1 cut(s) 1180
BlpI GCTNAGC 1 cut(s) 603
BmcAI AGTACT 1 cut(s) 997
Bme1390I CCNGG 2 cut(s) 187, 915
Bme18I GGWCC 1 cut(s) 2198
BmeT110I CYCGRG 3 cut(s) 657, 1557, 2030
BmgT120I GGNCC 2 cut(s) 1712, 2198
BmiI GGNNCC 1 cut(s) 1269
BmrFI CCNGG 2 cut(s) 187, 915
BmsI GCATC 5 cut(s) 532, 966, 1678, 1744, 1789
BmtI GCTAGC 1 cut(s) 518
BpiI GAAGAC 2 cut(s) 489, 1133
BplI GAGNNNNNCTC 2 cut(s) 2149, 2181
Bpu1102I GCTNAGC 1 cut(s) 603
BpuEI CTTGAG 6 cut(s) 774, 1206, 1588, 1618, 1836, 2092
BpuMI CCSGG 1 cut(s) 187
BsaAI YACGTR 1 cut(s) 1214
BsaI GGTCTC 1 cut(s) 2099
BsaJI CCNNGG 2 cut(s) 186, 1180
BsaWI WCCGGW 1 cut(s) 325
BsaXI ACNNNNNCTCC 4 cut(s) 15, 45, 1337, 1367
Bsc4I CCNNNNNNNGG 5 cut(s) 972, 1163, 1186, 1244, 1424
Bse1I ACTGG 1 cut(s) 774
Bse3DI GCAATG 3 cut(s) 412, 429, 2197
BseBI CCWGG 1 cut(s) 915
BseDI CCNNGG 2 cut(s) 186, 1180
BseGI GGATG 6 cut(s) 8, 622, 981, 1126, 1711, 2255
BseLI CCNNNNNNNGG 5 cut(s) 972, 1163, 1186, 1244, 1424
BseMI GCAATG 3 cut(s) 412, 429, 2197
BseMII CTCAG 6 cut(s) 204, 431, 519, 834, 1085, 2180
BseNI ACTGG 1 cut(s) 774
BseXI GCAGC 9 cut(s) 94, 134, 193, 293, 353, 1088, 1202, 1791, 2101
BseYI CCCAGC 3 cut(s) 1185, 1227, 1244
BsgI GTGCAG 1 cut(s) 1095
Bsh1285I CGRYCG 1 cut(s) 1649
BshFI GGCC 6 cut(s) 382, 965, 1179, 1713, 1970, 2249
BsiEI CGRYCG 1 cut(s) 1649
BsiHKAI GWGCWC 2 cut(s) 1604, 1872
BsiHKCI CYCGRG 3 cut(s) 657, 1557, 2030
BsiSI CCGG 3 cut(s) 147, 186, 326
BsiWI CGTACG 1 cut(s) 1214
BslFI GGGAC 1 cut(s) 741
BslI CCNNNNNNNGG 5 cut(s) 972, 1163, 1186, 1244, 1424
BsmAI GTCTC 7 cut(s) 260, 574, 660, 1726, 2099, 2169, 2219
BsmFI GGGAC 1 cut(s) 741
BsmI GAATGC 3 cut(s) 1239, 1802, 2276
BsnI GGCC 6 cut(s) 382, 965, 1179, 1713, 1970, 2249
Bso31I GGTCTC 1 cut(s) 2099
BsoBI CYCGRG 3 cut(s) 657, 1557, 2030
Bsp1286I GDGCHC 3 cut(s) 1314, 1604, 1872
Bsp143I GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
Bsp1720I GCTNAGC 1 cut(s) 603
BspACI CCGC 3 cut(s) 2109, 2243, 2279
BspANI GGCC 6 cut(s) 382, 965, 1179, 1713, 1970, 2249
BspCNI CTCAG 6 cut(s) 205, 430, 520, 835, 1086, 2179
BspLI GGNNCC 1 cut(s) 1269
BspMI ACCTGC 1 cut(s) 2186
BspOI GCTAGC 1 cut(s) 518
BspPI GGATC 4 cut(s) 188, 418, 1112, 2217
BspQI GCTCTTC 3 cut(s) 540, 621, 933
BspTNI GGTCTC 1 cut(s) 2099
BsrDI GCAATG 3 cut(s) 412, 429, 2197
BsrI ACTGG 1 cut(s) 774
BssECI CCNNGG 2 cut(s) 186, 1180
BssMI GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
BssSI CACGAG 2 cut(s) 156, 1199
BssT1I CCWWGG 1 cut(s) 1180
Bst2BI CACGAG 2 cut(s) 156, 1199
Bst2UI CCWGG 1 cut(s) 915
Bst4CI ACNGT 9 cut(s) 358, 491, 694, 952, 1083, 1349, 1375, 1427, 2240
Bst6I CTCTTC 4 cut(s) 216, 540, 621, 933
BstBAI YACGTR 1 cut(s) 1214
BstC8I GCNNGC 4 cut(s) 403, 516, 2247, 2276
BstEII GGTNACC 1 cut(s) 1152
BstENI CCTNNNNNAGG 1 cut(s) 970
BstF5I GGATG 6 cut(s) 8, 622, 981, 1126, 1711, 2255
BstKTI GATC 6 cut(s) 196, 298, 413, 1107, 1596, 2225
BstMAI GTCTC 7 cut(s) 260, 574, 660, 1726, 2099, 2169, 2219
BstMBI GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
BstMCI CGRYCG 1 cut(s) 1649
BstMWI GCNNNNNNNGC 9 cut(s) 290, 347, 367, 637, 890, 932, 1788, 2082, 2179
BstNI CCWGG 1 cut(s) 915
BstPI GGTNACC 1 cut(s) 1152
BstSCI CCNGG 2 cut(s) 185, 913
BstV1I GCAGC 9 cut(s) 94, 134, 193, 293, 353, 1088, 1202, 1791, 2101
BstV2I GAAGAC 2 cut(s) 489, 1133
BstX2I RGATCY 2 cut(s) 193, 410
BstYI RGATCY 2 cut(s) 193, 410
BsuRI GGCC 6 cut(s) 382, 965, 1179, 1713, 1970, 2249
BtsCI GGATG 6 cut(s) 8, 622, 981, 1126, 1711, 2255
BtsI GCAGTG 2 cut(s) 1611, 2045
BtsIMutI CAGTG 7 cut(s) 699, 840, 1079, 1611, 1683, 1794, 2045
BveI ACCTGC 1 cut(s) 2186
Cac8I GCNNGC 4 cut(s) 403, 516, 2247, 2276
Cfr13I GGNCC 2 cut(s) 1712, 2198
Csp6I GTAC 5 cut(s) 996, 1215, 1376, 1415, 1508
CviAII CATG 6 cut(s) 112, 262, 299, 1630, 1861, 2151
CviQI GTAC 5 cut(s) 996, 1215, 1376, 1415, 1508
DpnI GATC 6 cut(s) 195, 297, 412, 1106, 1595, 2224
DpnII GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
DraIII CACNNNGTG 1 cut(s) 2127
EaeI YGGCCR 1 cut(s) 380
Eam1104I CTCTTC 4 cut(s) 216, 540, 621, 933
EarI CTCTTC 4 cut(s) 216, 540, 621, 933
Ecl136II GAGCTC 2 cut(s) 1602, 1870
Eco130I CCWWGG 1 cut(s) 1180
Eco147I AGGCCT 3 cut(s) 965, 1179, 2249
Eco24I GRGCYC 3 cut(s) 1314, 1604, 1872
Eco31I GGTCTC 1 cut(s) 2099
Eco47I GGWCC 1 cut(s) 2198
Eco53kI GAGCTC 2 cut(s) 1602, 1870
Eco57I CTGAAG 1 cut(s) 989
Eco88I CYCGRG 3 cut(s) 657, 1557, 2030
Eco91I GGTNACC 1 cut(s) 1152
EcoICRI GAGCTC 2 cut(s) 1602, 1870
EcoNI CCTNNNNNAGG 1 cut(s) 970
EcoO65I GGTNACC 1 cut(s) 1152
EcoRI GAATTC 2 cut(s) 863, 875
EcoRII CCWGG 1 cut(s) 913
EcoT14I CCWWGG 1 cut(s) 1180
EcoT22I ATGCAT 2 cut(s) 431, 1804
EcoT38I GRGCYC 3 cut(s) 1314, 1604, 1872
ErhI CCWWGG 1 cut(s) 1180
FaeI CATG 6 cut(s) 115, 265, 302, 1633, 1864, 2154
FaqI GGGAC 1 cut(s) 741
FatI CATG 6 cut(s) 111, 261, 298, 1629, 1860, 2150
FauNDI CATATG 3 cut(s) 1330, 1342, 1846
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 2 cut(s) 1857, 2059
FokI GGATG 5 cut(s) 629, 988, 1133, 1718, 2242
FriOI GRGCYC 3 cut(s) 1314, 1604, 1872
GsaI CCCAGC 3 cut(s) 1189, 1231, 1248
HaeIII GGCC 6 cut(s) 382, 965, 1179, 1713, 1970, 2249
HapII CCGG 3 cut(s) 147, 186, 326
Hin1II CATG 6 cut(s) 115, 265, 302, 1633, 1864, 2154
HindIII AAGCTT 3 cut(s) 130, 638, 2068
HpaII CCGG 3 cut(s) 147, 186, 326
HphI GGTGA 3 cut(s) 763, 806, 1146
Hpy166II GTNNAC 4 cut(s) 6, 161, 1858, 2060
Hpy8I GTNNAC 4 cut(s) 6, 161, 1858, 2060
Hpy99I CGWCG 1 cut(s) 491
HpyCH4III ACNGT 9 cut(s) 358, 491, 694, 952, 1083, 1349, 1375, 1427, 2240
HpyCH4IV ACGT 2 cut(s) 57, 1213
HpyF10VI GCNNNNNNNGC 9 cut(s) 290, 347, 367, 637, 890, 932, 1788, 2082, 2179
HpySE526I ACGT 2 cut(s) 57, 1213
Hsp92II CATG 6 cut(s) 115, 265, 302, 1633, 1864, 2154
Ksp22I TGATCA 1 cut(s) 295
Kzo9I GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
LguI GCTCTTC 3 cut(s) 540, 621, 933
LmnI GCTCC 1 cut(s) 62
Lsp1109I GCAGC 9 cut(s) 94, 134, 193, 293, 353, 1088, 1202, 1791, 2101
LweI GCATC 5 cut(s) 532, 966, 1678, 1744, 1789
MaeII ACGT 2 cut(s) 57, 1213
MaeIII GTNAC 6 cut(s) 49, 694, 794, 1152, 1277, 1660
MalI GATC 6 cut(s) 195, 297, 412, 1106, 1595, 2224
MboI GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
MflI RGATCY 2 cut(s) 193, 410
MhlI GDGCHC 3 cut(s) 1314, 1604, 1872
MlsI TGGCCA 1 cut(s) 382
MluNI TGGCCA 1 cut(s) 382
MlyI GAGTC 5 cut(s) 176, 752, 794, 854, 2020
MmeI TCCRAC 3 cut(s) 40, 1065, 2259
Mox20I TGGCCA 1 cut(s) 382
Mph1103I ATGCAT 2 cut(s) 431, 1804
MroXI GAANNNNTTC 2 cut(s) 875, 1321
MscI TGGCCA 1 cut(s) 382
MseI TTAA 7 cut(s) 72, 1046, 1142, 1422, 1655, 1676, 2079
MslI CAYNNNNRTG 3 cut(s) 13, 356, 454
Msp20I TGGCCA 1 cut(s) 382
MspA1I CMGCKG 2 cut(s) 125, 1274
MspI CCGG 3 cut(s) 147, 186, 326
MspR9I CCNGG 2 cut(s) 187, 915
Mva1269I GAATGC 3 cut(s) 1239, 1802, 2276
MvaI CCWGG 1 cut(s) 915
MwoI GCNNNNNNNGC 9 cut(s) 290, 347, 367, 637, 890, 932, 1788, 2082, 2179
NciI CCSGG 1 cut(s) 187
NdeI CATATG 3 cut(s) 1330, 1342, 1846
NdeII GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
NheI GCTAGC 1 cut(s) 514
NlaIII CATG 6 cut(s) 115, 265, 302, 1633, 1864, 2154
NlaIV GGNNCC 1 cut(s) 1269
NmuCI GTSAC 4 cut(s) 49, 694, 794, 1152
NsiI ATGCAT 2 cut(s) 431, 1804
PceI AGGCCT 3 cut(s) 965, 1179, 2249
PciSI GCTCTTC 3 cut(s) 540, 621, 933
PcsI WCGNNNNNNNCGW 1 cut(s) 1431
PctI GAATGC 3 cut(s) 1239, 1802, 2276
PdmI GAANNNNTTC 2 cut(s) 875, 1321
PfeI GAWTC 6 cut(s) 80, 562, 822, 1088, 1098, 1767
Pfl23II CGTACG 1 cut(s) 1214
PflMI CCANNNNNTGG 1 cut(s) 1163
PleI GAGTC 5 cut(s) 176, 751, 794, 853, 2020
PpsI GAGTC 5 cut(s) 176, 751, 794, 853, 2020
Ppu21I YACGTR 1 cut(s) 1214
PshBI ATTAAT 1 cut(s) 72
PsiI TTATAA 1 cut(s) 1458
Psp124BI GAGCTC 2 cut(s) 1604, 1872
Psp1406I AACGTT 1 cut(s) 57
Psp6I CCWGG 1 cut(s) 913
PspEI GGTNACC 1 cut(s) 1152
PspFI CCCAGC 3 cut(s) 1185, 1227, 1244
PspGI CCWGG 1 cut(s) 913
PspLI CGTACG 1 cut(s) 1214
PspN4I GGNNCC 1 cut(s) 1269
PspPI GGNCC 2 cut(s) 1712, 2198
PsrI GAACNNNNNNTAC 2 cut(s) 1520, 1552
PsuI RGATCY 2 cut(s) 193, 410
PvuII CAGCTG 2 cut(s) 125, 1274
RsaI GTAC 5 cut(s) 997, 1216, 1377, 1416, 1509
RsaNI GTAC 5 cut(s) 996, 1215, 1376, 1415, 1508
RseI CAYNNNNRTG 3 cut(s) 13, 356, 454
SacI GAGCTC 2 cut(s) 1604, 1872
SapI GCTCTTC 3 cut(s) 540, 621, 933
SaqAI TTAA 7 cut(s) 72, 1046, 1142, 1422, 1655, 1676, 2079
Sau3AI GATC 6 cut(s) 193, 295, 410, 1104, 1593, 2222
Sau96I GGNCC 2 cut(s) 1712, 2198
ScaI AGTACT 1 cut(s) 997
SchI GAGTC 5 cut(s) 176, 752, 794, 854, 2020
ScrFI CCNGG 2 cut(s) 187, 915
SduI GDGCHC 3 cut(s) 1314, 1604, 1872
SfaNI GCATC 5 cut(s) 532, 966, 1678, 1744, 1789
SinI GGWCC 1 cut(s) 2198
SmiMI CAYNNNNRTG 3 cut(s) 13, 356, 454
SmlI CTYRAG 6 cut(s) 789, 1221, 1597, 1603, 1851, 2071
SmoI CTYRAG 6 cut(s) 789, 1221, 1597, 1603, 1851, 2071
SpeI ACTAGT 1 cut(s) 992
SseBI AGGCCT 3 cut(s) 965, 1179, 2249
SsiI CCGC 3 cut(s) 2109, 2243, 2279
SstI GAGCTC 2 cut(s) 1604, 1872
StuI AGGCCT 3 cut(s) 965, 1179, 2249
StyD4I CCNGG 2 cut(s) 185, 913
StyI CCWWGG 1 cut(s) 1180
TaaI ACNGT 9 cut(s) 358, 491, 694, 952, 1083, 1349, 1375, 1427, 2240
TaiI ACGT 2 cut(s) 60, 1216
TaqI TCGA 5 cut(s) 596, 931, 1752, 2221, 2268
TaqII GACCGA 2 cut(s) 845, 1663
TatI WGTACW 2 cut(s) 995, 1507
TauI GCSGC 1 cut(s) 2281
TfiI GAWTC 6 cut(s) 80, 562, 822, 1088, 1098, 1767
Tru1I TTAA 7 cut(s) 72, 1046, 1142, 1422, 1655, 1676, 2079
Tru9I TTAA 7 cut(s) 72, 1046, 1142, 1422, 1655, 1676, 2079
TscAI CASTG 7 cut(s) 699, 847, 1086, 1618, 1690, 1801, 2045
TseFI GTSAC 4 cut(s) 49, 694, 794, 1152
TseI GCWGC 9 cut(s) 107, 122, 206, 281, 341, 1076, 1190, 1779, 2114
Tsp45I GTSAC 4 cut(s) 49, 694, 794, 1152
TspGWI ACGGA 1 cut(s) 2248
TspRI CASTG 7 cut(s) 699, 847, 1086, 1618, 1690, 1801, 2045
Van91I CCANNNNNTGG 1 cut(s) 1163
VpaK11BI GGWCC 1 cut(s) 2198
VspI ATTAAT 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 970
XbaI TCTAGA 1 cut(s) 1975
XmaJI CCTAGG 1 cut(s) 1180
XmiI GTMKAC 2 cut(s) 1857, 2059
XmnI GAANNNNTTC 2 cut(s) 875, 1321
ZrmI AGTACT 1 cut(s) 997
Zsp2I ATGCAT 2 cut(s) 431, 1804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.