Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004626.1

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

22466 .. 26971

Gene Structure 4506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004626.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

atggaacggggaaaaatcaggttagcatgcaatcagcccaatgatataattggccaagatgtttcggcaagagaagggcctgctgctccttctctgatatcacaacttctgagtgcatttcgtgccttctccgatgccctacaaggaaattcgaaaagttgcaagatttatacactgctggaactaaatctaaagtgtctggaaccattgctgttactgttatctacatatggaaatgccttccattcaaaggaagaactgttgaaggaactacatttgtgcctatctacacagcttgttggcaaattttggaataggtacaatagtgattacaaggacaagctttctcagttagactttgatctccaagacctcttccttatactgttcttggaaattgaaaatgatttaaagagcttgcaatgggagatcgatcagcagcgtgctttggttctagcatcagcagaatcagtctctgaggttggcgcagaaacgaatacaccaagggaaggagcaagaggtgttgcaagattaactatgaagcctctaacaatgtacaaggaacttgagattaacacagcaagggaaggagaaagaggtgttccaatagtaactctgaagcctcgaacaataaagctgtgtgtttggacagtgagatcatttacgaccgggactttgactacggctaatttggtttcaagactcttgagaggtcttacctcttacaggttcactcatgcttctcccaccattttcaattctggaacgccaaggcctcagttgagtagctgcatccttgttagcaaagtcccaagactttggcatgtgtttcttctgttcatcatcatcacatactcccatggagttgaagctgaaaataagataagtgtcactaatgttggagaaatcattagttttaattctcgtatcaggaaacaacagaaaactgccatggagattgcagctgaaaacttcaacaaccattcaaagaatcataagataatcattcattttctacattccaatagagacccctggcttgctgctctttctgctgaagaattgataaaggaaaagaaggcaaaactgctaatgggcatggagacttggcaggaagcagctctagtagctgatgtgggaaatcgagctcaaattccagtgatttcatttgcggcaccaactataaccacccctctaatgcaatgccgctggccatttttgatacgtatgtcaagcgatggtgctgctcaaatgaaatgcattgcagacatagtttctgcatacaattgggaaagggttgtggtgatatacgaagatgatggttacggtggtgatgttgggacactagctcttttgtccgaggctcttcaagatgttggttcaaagattgagcatcgtttggttctccctcaggtttcttctgagtttaatcctaattgggttgaactagaagagctgttgaagcttcccacatttcaatctcgggtgttcattgtgctgcagtcatctttaccaactgtgaccaatctattcagggtggcaaagaagatgggacttgtaggaagagactcagcttggataatcacagagagaattactagtctgcttgacactcaagtcaatcatgatatgggaggtattttgggaatcaagagctactatgccactcatactagttcctatatcaagttcaacaaggcattccaaaaaaagtacccagaaaaagaagactccaggccaggaatttatgctcttcgagcatatgatcatactagaattgtaatacaggccctaagaatgagtagtaacagtactactaacattcaggttgtgttaagtacagtgctaagaaattatcagggtttaagtgggaaaatgcacattgaaggaggtgaagtgttgtactcactcatatacaggatcgtaaacattgtggaagggaacagatacaaaaagttgaacttttggagaccagaggttgggttctcagaaagcctttcaaaagaaacaagcaaaaacagaagtgatgatggtggtgcagtagtttggcccgggaatctaagtcaacgagctcctaaaggctgggcaatgccgactgctgataagccagtgataattggggttccagcctttgatggttcgtatgatgatctggtacatcaagtccataacaagtcatcatatccagatgagacagactatctccgtacagggctttacagatgggcaggtgatggatatgcctttgataagaagggaaatggagactacatagaggtggtgaacactccaaacaacccagatggtactaattggaaagccatgcatggtggaaaacagaccagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

782

Amino Acids

87.83

Weight (kDa)

8.77

Isoelectric Point (pI)

35.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2219
AasI	GACNNNNNNGTC	1 cut(s)	1616
Acc36I	ACCTGC	1 cut(s)	2219
AccB1I	GGYRCC	1 cut(s)	1174
AccB7I	CCANNNNNTGG	1 cut(s)	1979
AciI	CCGC	2 cut(s)	1172, 1207
AclWI	GGATC	1 cut(s)	1928
AcoI	YGGCCR	2 cut(s)	52, 1211
AcsI	RAATTY	4 cut(s)	148, 305, 1152, 1743
AcuI	CTGAAG	2 cut(s)	638, 1077
AfaI	GTAC	9 cut(s)	320, 557, 1715, 1813, 1840, 1904, 2157, 2209, 2308
AfiI	CCNNNNNNNGG	4 cut(s)	250, 509, 726, 1979
AhlI	ACTAGT	2 cut(s)	1598, 1673
AjnI	CCWGG	3 cut(s)	1034, 1733, 1738
Alw21I	GWGCWC	2 cut(s)	1150, 2074
Alw26I	GTCTC	7 cut(s)	478, 1023, 1097, 1560, 1963, 2186, 2259
AlwI	GGATC	1 cut(s)	1928
AlwNI	CAGNNNCTG	1 cut(s)	476
Ama87I	CYCGRG	2 cut(s)	1482, 2051
AoxI	GGCC	7 cut(s)	52, 77, 773, 1211, 1736, 1788, 2048
ApeKI	GCWGC	8 cut(s)	83, 439, 789, 962, 1043, 1118, 1244, 1498
ApoI	RAATTY	4 cut(s)	148, 305, 1152, 1743
ArsI	GACNNNNNNTTYG	2 cut(s)	658, 690
AspLEI	GCGC	1 cut(s)	488
AspS9I	GGNCC	3 cut(s)	77, 1789, 2049
AsuC2I	CCSGG	3 cut(s)	670, 2052, 2053
AsuHPI	GGTGA	5 cut(s)	1315, 1343, 1904, 2243, 2293
AsuII	TTCGAA	1 cut(s)	152
AvaI	CYCGRG	2 cut(s)	1482, 2051
AxyI	CCTNAGG	1 cut(s)	1410
BaeI	ACNNNNGTAYC	4 cut(s)	310, 343, 1214, 1247
BalI	TGGCCA	2 cut(s)	54, 1213
BanI	GGYRCC	1 cut(s)	1174
BanII	GRGCYC	2 cut(s)	1150, 2074
BbsI	GAAGAC	1 cut(s)	1734
Bbv12I	GWGCWC	2 cut(s)	1150, 2074
BbvI	GCAGC	8 cut(s)	70, 451, 776, 974, 1030, 1130, 1231, 1485
BccI	CCATC	8 cut(s)	1232, 1313, 1543, 2024, 2129, 2217, 2228, 2297
BceAI	ACGGC	1 cut(s)	699
BcgI	CGANNNNNNTGC	2 cut(s)	1226, 1260
BciT130I	CCWGG	3 cut(s)	1036, 1735, 1740
BclI	TGATCA	1 cut(s)	1765
BcnI	CCSGG	3 cut(s)	670, 2052, 2053
BcoDI	GTCTC	7 cut(s)	478, 1023, 1097, 1560, 1963, 2186, 2259
BcuI	ACTAGT	2 cut(s)	1598, 1673
BfaI	CTAG	7 cut(s)	455, 1124, 1346, 1448, 1599, 1674, 1773
BfmI	CTRYAG	1 cut(s)	1499
BfuAI	ACCTGC	1 cut(s)	2219
BmcAI	AGTACT	1 cut(s)	1813
Bme1390I	CCNGG	6 cut(s)	670, 1036, 1735, 1740, 2052, 2053
BmeT110I	CYCGRG	2 cut(s)	1482, 2051
BmgT120I	GGNCC	3 cut(s)	77, 1789, 2049
BmiI	GGNNCC	3 cut(s)	204, 1176, 2124
BmrFI	CCNGG	6 cut(s)	670, 1036, 1735, 1740, 2052, 2053
BmsI	GCATC	4 cut(s)	124, 467, 801, 1402
BpiI	GAAGAC	1 cut(s)	1734
BpmI	CTGGAG	1 cut(s)	1717
Bpu14I	TTCGAA	1 cut(s)	152
BpuEI	CTTGAG	3 cut(s)	587, 727, 1599
BpuMI	CCSGG	3 cut(s)	670, 2052, 2053
Bsa29I	ATCGAT	1 cut(s)	432
BsaAI	YACGTR	1 cut(s)	1226
BsaI	GGTCTC	2 cut(s)	1023, 1963
BsaJI	CCNNGG	7 cut(s)	503, 770, 859, 951, 1034, 1359, 2051
BsaXI	ACNNNNNCTCC	2 cut(s)	1881, 1911
Bsc4I	CCNNNNNNNGG	4 cut(s)	250, 509, 726, 1979
Bse1I	ACTGG	2 cut(s)	1157, 2108
Bse21I	CCTNAGG	1 cut(s)	1410
Bse3DI	GCAATG	5 cut(s)	206, 428, 1208, 1260, 2094
BseBI	CCWGG	3 cut(s)	1036, 1735, 1740
BseCI	ATCGAT	1 cut(s)	432
BseDI	CCNNGG	7 cut(s)	503, 770, 859, 951, 1034, 1359, 2051
BseGI	GGATG	1 cut(s)	792
BseLI	CCNNNNNNNGG	4 cut(s)	250, 509, 726, 1979
BseMI	GCAATG	5 cut(s)	206, 428, 1208, 1260, 2094
BseMII	CTCAG	8 cut(s)	101, 362, 468, 791, 1413, 1424, 1584, 2001
BseNI	ACTGG	2 cut(s)	1157, 2108
BseXI	GCAGC	8 cut(s)	70, 451, 776, 974, 1030, 1130, 1231, 1485
BseYI	CCCAGC	1 cut(s)	2082
BsgI	GTGCAG	1 cut(s)	2058
Bsh1285I	CGRYCG	1 cut(s)	669
BshFI	GGCC	7 cut(s)	54, 79, 775, 1213, 1738, 1790, 2050
BshNI	GGYRCC	1 cut(s)	1174
BshVI	ATCGAT	1 cut(s)	432
BsiEI	CGRYCG	1 cut(s)	669
BsiHKAI	GWGCWC	2 cut(s)	1150, 2074
BsiHKCI	CYCGRG	2 cut(s)	1482, 2051
BsiSI	CCGG	2 cut(s)	669, 2052
BslFI	GGGAC	4 cut(s)	685, 794, 1354, 1566
BslI	CCNNNNNNNGG	4 cut(s)	250, 509, 726, 1979
BsmAI	GTCTC	7 cut(s)	478, 1023, 1097, 1560, 1963, 2186, 2259
BsmFI	GGGAC	4 cut(s)	685, 794, 1354, 1566
BsmI	GAATGC	1 cut(s)	1700
BsnI	GGCC	7 cut(s)	54, 79, 775, 1213, 1738, 1790, 2050
Bso31I	GGTCTC	2 cut(s)	1023, 1963
BsoBI	CYCGRG	2 cut(s)	1482, 2051
Bsp119I	TTCGAA	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	1150, 2074
Bsp1407I	TGTACA	1 cut(s)	555
Bsp143I	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
Bsp19I	CCATGG	2 cut(s)	859, 951
BspACI	CCGC	2 cut(s)	1172, 1207
BspANI	GGCC	7 cut(s)	54, 79, 775, 1213, 1738, 1790, 2050
BspCNI	CTCAG	8 cut(s)	102, 361, 469, 790, 1414, 1423, 1583, 2000
BspDI	ATCGAT	1 cut(s)	432
BspHI	TCATGA	1 cut(s)	1624
BspLI	GGNNCC	3 cut(s)	204, 1176, 2124
BspMAI	CTGCAG	1 cut(s)	1503
BspMI	ACCTGC	1 cut(s)	2219
BspPI	GGATC	1 cut(s)	1928
BspQI	GCTCTTC	3 cut(s)	1371, 1446, 1758
BspT104I	TTCGAA	1 cut(s)	152
BspT107I	GGYRCC	1 cut(s)	1174
BspTNI	GGTCTC	2 cut(s)	1023, 1963
BsrDI	GCAATG	5 cut(s)	206, 428, 1208, 1260, 2094
BsrGI	TGTACA	1 cut(s)	555
BsrI	ACTGG	2 cut(s)	1157, 2108
BssECI	CCNNGG	7 cut(s)	503, 770, 859, 951, 1034, 1359, 2051
BssMI	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
BssT1I	CCWWGG	4 cut(s)	503, 770, 859, 951
Bst2UI	CCWGG	3 cut(s)	1036, 1735, 1740
Bst4CI	ACNGT	8 cut(s)	219, 261, 387, 652, 1328, 1519, 1811, 1843
Bst6I	CTCTTC	5 cut(s)	380, 1371, 1446, 1558, 1758
BstAPI	GCANNNNNTGC	1 cut(s)	122
BstAUI	TGTACA	1 cut(s)	555
BstBAI	YACGTR	1 cut(s)	1226
BstBI	TTCGAA	1 cut(s)	152
BstC8I	GCNNGC	6 cut(s)	28, 81, 419, 444, 1041, 1211
BstDSI	CCRYGG	2 cut(s)	859, 951
BstENI	CCTNNNNNAGG	1 cut(s)	724
BstF5I	GGATG	1 cut(s)	792
BstHHI	GCGC	1 cut(s)	488
BstKTI	GATC	7 cut(s)	364, 432, 436, 659, 1768, 1923, 2152
BstMAI	GTCTC	7 cut(s)	478, 1023, 1097, 1560, 1963, 2186, 2259
BstMBI	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
BstMCI	CGRYCG	1 cut(s)	669
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 1052, 1127, 1462, 1757
BstNI	CCWGG	3 cut(s)	1036, 1735, 1740
BstNSI	RCATGY	2 cut(s)	30, 827
BstSCI	CCNGG	6 cut(s)	668, 1034, 1733, 1738, 2050, 2051
BstSFI	CTRYAG	1 cut(s)	1499
BstSNI	TACGTA	1 cut(s)	1226
BstV1I	GCAGC	8 cut(s)	70, 451, 776, 974, 1030, 1130, 1231, 1485
BstV2I	GAAGAC	1 cut(s)	1734
BstXI	CCANNNNNNTGG	1 cut(s)	819
Bsu15I	ATCGAT	1 cut(s)	432
Bsu36I	CCTNAGG	1 cut(s)	1410
BsuRI	GGCC	7 cut(s)	54, 79, 775, 1213, 1738, 1790, 2050
BsuTUI	ATCGAT	1 cut(s)	432
BtgI	CCRYGG	2 cut(s)	859, 951
BtgZI	GCGATG	1 cut(s)	1251
BtsCI	GGATG	1 cut(s)	792
BtsI	GCAGTG	1 cut(s)	173
BtsIMutI	CAGTG	5 cut(s)	173, 657, 1164, 1848, 2115
BveI	ACCTGC	1 cut(s)	2219
Cac8I	GCNNGC	6 cut(s)	28, 81, 419, 444, 1041, 1211
CaiI	CAGNNNCTG	1 cut(s)	476
CciI	TCATGA	1 cut(s)	1624
CfoI	GCGC	1 cut(s)	488
Cfr13I	GGNCC	3 cut(s)	77, 1789, 2049
Cfr9I	CCCGGG	1 cut(s)	2051
ClaI	ATCGAT	1 cut(s)	432
Csp6I	GTAC	9 cut(s)	319, 556, 1714, 1812, 1839, 1903, 2156, 2208, 2307
CviAII	CATG	9 cut(s)	27, 737, 824, 860, 952, 1099, 1625, 2323, 2327
CviQI	GTAC	9 cut(s)	319, 556, 1714, 1812, 1839, 1903, 2156, 2208, 2307
DpnI	GATC	7 cut(s)	363, 431, 435, 658, 1767, 1922, 2151
DpnII	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
DraI	TTTAAA	1 cut(s)	411
DrdI	GACNNNNNNGTC	1 cut(s)	1616
DseDI	GACNNNNNNGTC	1 cut(s)	1616
EaeI	YGGCCR	2 cut(s)	52, 1211
Eam1104I	CTCTTC	5 cut(s)	380, 1371, 1446, 1558, 1758
EarI	CTCTTC	5 cut(s)	380, 1371, 1446, 1558, 1758
Ecl136II	GAGCTC	2 cut(s)	1148, 2072
Eco105I	TACGTA	1 cut(s)	1226
Eco130I	CCWWGG	4 cut(s)	503, 770, 859, 951
Eco147I	AGGCCT	1 cut(s)	775
Eco24I	GRGCYC	2 cut(s)	1150, 2074
Eco31I	GGTCTC	2 cut(s)	1023, 1963
Eco32I	GATATC	1 cut(s)	99
Eco53kI	GAGCTC	2 cut(s)	1148, 2072
Eco57I	CTGAAG	2 cut(s)	638, 1077
Eco81I	CCTNAGG	1 cut(s)	1410
Eco88I	CYCGRG	2 cut(s)	1482, 2051
EcoICRI	GAGCTC	2 cut(s)	1148, 2072
EcoNI	CCTNNNNNAGG	1 cut(s)	724
EcoO109I	RGGNCCY	2 cut(s)	77, 1789
EcoRII	CCWGG	3 cut(s)	1034, 1733, 1738
EcoRV	GATATC	1 cut(s)	99
EcoT14I	CCWWGG	4 cut(s)	503, 770, 859, 951
EcoT22I	ATGCAT	2 cut(s)	1262, 2328
EcoT38I	GRGCYC	2 cut(s)	1150, 2074
ErhI	CCWWGG	4 cut(s)	503, 770, 859, 951
FaeI	CATG	9 cut(s)	30, 740, 827, 863, 955, 1102, 1628, 2326, 2330
FalI	AAGNNNNNCTT	2 cut(s)	1946, 1978
FaqI	GGGAC	4 cut(s)	685, 794, 1354, 1566
FatI	CATG	9 cut(s)	26, 736, 823, 859, 951, 1098, 1624, 2322, 2326
FauNDI	CATATG	2 cut(s)	229, 1762
FbaI	TGATCA	1 cut(s)	1765
FokI	GGATG	1 cut(s)	779
FriOI	GRGCYC	2 cut(s)	1150, 2074
FspBI	CTAG	7 cut(s)	455, 1124, 1346, 1448, 1599, 1674, 1773
GlaI	GCGC	1 cut(s)	487
GsaI	CCCAGC	1 cut(s)	2086
GsuI	CTGGAG	1 cut(s)	1717
HaeIII	GGCC	7 cut(s)	54, 79, 775, 1213, 1738, 1790, 2050
HapII	CCGG	2 cut(s)	669, 2052
HhaI	GCGC	1 cut(s)	488
Hin1II	CATG	9 cut(s)	30, 740, 827, 863, 955, 1102, 1628, 2326, 2330
Hin6I	GCGC	1 cut(s)	486
HinP1I	GCGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	2066
HindII	GTYRAC	1 cut(s)	2066
HindIII	AAGCTT	2 cut(s)	341, 1463
HinfI	GANTC	7 cut(s)	467, 702, 991, 1568, 1647, 1730, 2056
HpaII	CCGG	2 cut(s)	669, 2052
HphI	GGTGA	5 cut(s)	1315, 1343, 1904, 2243, 2293
Hpy166II	GTNNAC	4 cut(s)	732, 1927, 2066, 2284
Hpy188I	TCNGA	8 cut(s)	96, 111, 133, 478, 618, 1360, 1423, 1990
Hpy188III	TCNNGA	9 cut(s)	200, 699, 706, 762, 931, 1370, 1625, 1651, 2186
Hpy8I	GTNNAC	4 cut(s)	732, 1927, 2066, 2284
HpyCH4III	ACNGT	8 cut(s)	219, 261, 387, 652, 1328, 1519, 1811, 1843
HpyCH4IV	ACGT	1 cut(s)	1225
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 1052, 1127, 1462, 1757
HpySE526I	ACGT	1 cut(s)	1225
Hsp92II	CATG	9 cut(s)	30, 740, 827, 863, 955, 1102, 1628, 2326, 2330
HspAI	GCGC	1 cut(s)	486
Ksp22I	TGATCA	1 cut(s)	1765
Kzo9I	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
LguI	GCTCTTC	3 cut(s)	1371, 1446, 1758
LmnI	GCTCC	3 cut(s)	91, 512, 2077
Lsp1109I	GCAGC	8 cut(s)	70, 451, 776, 974, 1030, 1130, 1231, 1485
LweI	GCATC	4 cut(s)	124, 467, 801, 1402
MaeI	CTAG	7 cut(s)	455, 1124, 1346, 1448, 1599, 1674, 1773
MaeII	ACGT	1 cut(s)	1225
MaeIII	GTNAC	6 cut(s)	213, 610, 889, 1322, 1519, 1805
MalI	GATC	7 cut(s)	363, 431, 435, 658, 1767, 1922, 2151
MboI	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
MfeI	CAATTG	1 cut(s)	1285
MhlI	GDGCHC	2 cut(s)	1150, 2074
MlsI	TGGCCA	2 cut(s)	54, 1213
MluNI	TGGCCA	2 cut(s)	54, 1213
MlyI	GAGTC	3 cut(s)	696, 1562, 1724
MmeI	TCCRAC	1 cut(s)	880
Mox20I	TGGCCA	2 cut(s)	54, 1213
Mph1103I	ATGCAT	2 cut(s)	1262, 2328
MscI	TGGCCA	2 cut(s)	54, 1213
MseI	TTAA	7 cut(s)	410, 533, 573, 918, 1428, 1835, 1865
MslI	CAYNNNNRTG	1 cut(s)	2276
Msp20I	TGGCCA	2 cut(s)	54, 1213
MspA1I	CMGCKG	2 cut(s)	965, 1209
MspI	CCGG	2 cut(s)	669, 2052
MspR9I	CCNGG	6 cut(s)	670, 1036, 1735, 1740, 2052, 2053
MunI	CAATTG	1 cut(s)	1285
Mva1269I	GAATGC	1 cut(s)	1700
MvaI	CCWGG	3 cut(s)	1036, 1735, 1740
MwoI	GCNNNNNNNGC	5 cut(s)	122, 1052, 1127, 1462, 1757
NciI	CCSGG	3 cut(s)	670, 2052, 2053
NcoI	CCATGG	2 cut(s)	859, 951
NdeI	CATATG	2 cut(s)	229, 1762
NdeII	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
NlaIII	CATG	9 cut(s)	30, 740, 827, 863, 955, 1102, 1628, 2326, 2330
NlaIV	GGNNCC	3 cut(s)	204, 1176, 2124
NmuCI	GTSAC	2 cut(s)	889, 1519
NsiI	ATGCAT	2 cut(s)	1262, 2328
NspI	RCATGY	2 cut(s)	30, 827
NspV	TTCGAA	1 cut(s)	152
PaeI	GCATGC	1 cut(s)	30
PagI	TCATGA	1 cut(s)	1624
PaqCI	CACCTGC	1 cut(s)	2219
PceI	AGGCCT	1 cut(s)	775
PciSI	GCTCTTC	3 cut(s)	1371, 1446, 1758
PctI	GAATGC	1 cut(s)	1700
PfeI	GAWTC	4 cut(s)	467, 991, 1647, 2056
PflMI	CCANNNNNTGG	1 cut(s)	1979
PleI	GAGTC	3 cut(s)	696, 1562, 1724
PpsI	GAGTC	3 cut(s)	696, 1562, 1724
Ppu21I	YACGTR	1 cut(s)	1226
Psp124BI	GAGCTC	2 cut(s)	1150, 2074
Psp6I	CCWGG	3 cut(s)	1034, 1733, 1738
PspFI	CCCAGC	1 cut(s)	2082
PspGI	CCWGG	3 cut(s)	1034, 1733, 1738
PspN4I	GGNNCC	3 cut(s)	204, 1176, 2124
PspPI	GGNCC	3 cut(s)	77, 1789, 2049
PstI	CTGCAG	1 cut(s)	1503
PstNI	CAGNNNCTG	1 cut(s)	476
PvuII	CAGCTG	1 cut(s)	965
RsaI	GTAC	9 cut(s)	320, 557, 1715, 1813, 1840, 1904, 2157, 2209, 2308
RsaNI	GTAC	9 cut(s)	319, 556, 1714, 1812, 1839, 1903, 2156, 2208, 2307
RseI	CAYNNNNRTG	1 cut(s)	2276
SacI	GAGCTC	2 cut(s)	1150, 2074
SapI	GCTCTTC	3 cut(s)	1371, 1446, 1758
SaqAI	TTAA	7 cut(s)	410, 533, 573, 918, 1428, 1835, 1865
Sau3AI	GATC	7 cut(s)	361, 429, 433, 656, 1765, 1920, 2149
Sau96I	GGNCC	3 cut(s)	77, 1789, 2049
ScaI	AGTACT	1 cut(s)	1813
SchI	GAGTC	3 cut(s)	696, 1562, 1724
ScrFI	CCNGG	6 cut(s)	670, 1036, 1735, 1740, 2052, 2053
SduI	GDGCHC	2 cut(s)	1150, 2074
SfaNI	GCATC	4 cut(s)	124, 467, 801, 1402
SfcI	CTRYAG	1 cut(s)	1499
SfuI	TTCGAA	1 cut(s)	152
SmaI	CCCGGG	1 cut(s)	2053
SmiMI	CAYNNNNRTG	1 cut(s)	2276
SmlI	CTYRAG	3 cut(s)	566, 706, 1614
SmoI	CTYRAG	3 cut(s)	566, 706, 1614
SnaBI	TACGTA	1 cut(s)	1226
SpeI	ACTAGT	2 cut(s)	1598, 1673
SphI	GCATGC	1 cut(s)	30
SseBI	AGGCCT	1 cut(s)	775
SsiI	CCGC	2 cut(s)	1172, 1207
SspMI	CTAG	7 cut(s)	455, 1124, 1346, 1448, 1599, 1674, 1773
SstI	GAGCTC	2 cut(s)	1150, 2074
StuI	AGGCCT	1 cut(s)	775
StyD4I	CCNGG	6 cut(s)	668, 1034, 1733, 1738, 2050, 2051
StyI	CCWWGG	4 cut(s)	503, 770, 859, 951
TaaI	ACNGT	8 cut(s)	219, 261, 387, 652, 1328, 1519, 1811, 1843
TaiI	ACGT	1 cut(s)	1228
TaqI	TCGA	5 cut(s)	152, 432, 625, 1144, 1756
TatI	WGTACW	4 cut(s)	555, 1811, 1838, 1902
TauI	GCSGC	2 cut(s)	1175, 1209
TfiI	GAWTC	4 cut(s)	467, 991, 1647, 2056
Tru1I	TTAA	7 cut(s)	410, 533, 573, 918, 1428, 1835, 1865
Tru9I	TTAA	7 cut(s)	410, 533, 573, 918, 1428, 1835, 1865
TscAI	CASTG	5 cut(s)	180, 657, 1164, 1848, 2115
TseFI	GTSAC	2 cut(s)	889, 1519
TseI	GCWGC	8 cut(s)	83, 439, 789, 962, 1043, 1118, 1244, 1498
Tsp45I	GTSAC	2 cut(s)	889, 1519
TspDTI	ATGAA	6 cut(s)	554, 829, 998, 1155, 1268, 1480
TspGWI	ACGGA	1 cut(s)	2195
TspMI	CCCGGG	1 cut(s)	2051
TspRI	CASTG	5 cut(s)	180, 657, 1164, 1848, 2115
Van91I	CCANNNNNTGG	1 cut(s)	1979
XagI	CCTNNNNNAGG	1 cut(s)	724
XapI	RAATTY	4 cut(s)	148, 305, 1152, 1743
XceI	RCATGY	2 cut(s)	30, 827
XmaI	CCCGGG	1 cut(s)	2051
XspI	CTAG	7 cut(s)	455, 1124, 1346, 1448, 1599, 1674, 1773
ZrmI	AGTACT	1 cut(s)	1813
Zsp2I	ATGCAT	2 cut(s)	1262, 2328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.