Rw5G007250

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
7552198 .. 7574190
21993 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G007250.1

Sequence Viewer

Length: 2472 bp
ATGACTTTTCCTTCTACTAATACCGTTAACAGATTCCAAAGACTTTGGCATCTGCTTATCATCATCAGCATCCTCACTCTCTCTGAAGGAGCTGAAGCTGAAGAAAATGAGAAAACGATCACCAACGTTGGAGCACTCCTGAAAACTTCAACATGCAGCCTTTCAAAGACTCATAGCGTAAAATTTCACTTTCGAGATTCTCAAAGAGATCCCTTAACTGCTGCTTCTGCTGCTGAAGTGTTGATCAAAGAAAAGAAGGTAAAAGTGCTAATTGGCATAGAGACTTGGCAGGAAGCAGCTTTAGTAGCCGATGTGGGGAACCGAGCTCAAATTCCAGTGATTTCATTTGCAGCACCCACTATAACCCCACCTCTTGTGCAACGCAAGTGGCCATTTTTGATACGAGTGGCAAGCGATGGGGCTGCTCAAATGAAATGTATCACTGATATATATAGTTTCTTTGTACAGTTGGTAAAGGCTTACGAGGATGATGGTTATGGTGGTGATGCTGGGATGCTAGCTCTTTTATTTGAGTCACTCCAAGACGTTGGTTCCAAGATTGAGCATCATTTGGTTCTCCTACGGGTTTCTTCTATGTCTAATCCTAATTGGGGTGAATTAGAAGAGATGCCGAAGCTTCCCAGCTTTCAATCTCGGGTCTTCATTGTTCTTCAGTCATCTTTACCAACAGTGACTAATCTGTTCAGGGTGGTGAAGAAGATGGGACTTGTAGGAAGAGACTCGGCTTGGATAATCACAGAGAGTATTACTGGTTTACTTGACCCTCAGATCAATCATGATATGGAAGGTACTCTGGGAATCAAGACCTACTACGCCAATAATACCAGTTCCTATGCCAACTTCAACAAGGTATTCAAAGATATGAATTCATGCTCTTCGATCATACGATATTACGATCTGACTAGAATCGTAACACAGGCCATGAGAATGACTAGTAACAATACCACTAACCTTCAGGTAGTGTTGCACACAATGTTGAGCAATTACATGGGTTTAAGTGGGAAAATGCGTTTCAAAGGAGGTGAAGTGTTGTACTCTAAAATATTCAGCATCATAAATGTTGTTGAGGGGAACAGGTTCAAAGAATTGGACTTTTGGAGACCAGAGTTAGGGTTCTCAAAAGAAACAAGCAAATTCAGAAGTGATGATGTTGGAACAGTAGTTTGGCCCGGGAATCTAAGTGAACGAGCCCCGACAGGCTGGGCAATGCCTACTGCTGATAAACCAATGAGAATTAGCGTTCCAGGTAGAGCTTCCTTCCCAGCATTTGTAGAGGTTAATCCATCTGGGAAGAATAAGGTTGACGGTTTCTGCACTCGACTTTTCGAAATGGTGGTAAACCGTTTGAATTATACTTTGCACTACGAATACCAGGTCGTTTATGGCCCCTATGATGATCTGGTAGAACAAGTCCATAACAAGACTTTTGATGCTGGTGTTGGTGATATCACCCCATATATCGAGTCCGGTTTGTCAATCATAGTTCCACAAAAAGCTGAGCAATTAGCATGGACTAAGAATGTTTACAAAACCTTTCACCGGGAAAATGTGGGCGGCAAGTGGTGGCTTATTAGTCTACACATTGTATGGTTTTTGGAGCGCCTGGCTAATCCTGAATTCAGTGGCTCATTGACAAATCAGATTGGCACAGCAACTTGGTTCGCCTTCACCTCTTTGTTCTTTTCTCACAGAAGGAAAATCTATAACAACTTAACTCGAGTAGTTGTTGTAATGTGGCTATTTGTCGTATTGATCCTAACCTCATGTTACACAGCTAATCTGTCATCAATGCTCACCATTCAACGATTGAAACCAAATGTTACAGACATCGAAATGCTAATAAAAACCAACTCAAAAGTTGGCTCCAATAGGGATTCATTTGTCATCAATTACTTGGAGAAAGTACTAAACTTCAAACGAGAGAACATCATCAAAACAGACGGTGAATCCAACAACATTGAGGAATTCGAAAGTAAAAGAATATCTGCTGCCTTGCTTGAACCCCCATATGCGAAAGCATTCATGAACGAGCACCACAAAGAATATACTGCGATCACACTACCCTTCTATAGATTTGGGGGACTAGGATTTGTATTTCAGAAAGACTCTCCAGTTGCTCGGGATTTCACCAAGGTAATTCTAGAGTTATTGGAGGAGGGAGAACTGAAGTCACTTGAAGATACTTGGTTGACACAGAAAAGTGAGTGTCCAAATAATGCAACTTCCGATGGACCCGAAAGTTTGAACGTCAATAATTTTACGGGCCTTTATGTAATATCTGGTGCTACTTCCACCATTTGCCTTCTATTATCCTTTGCTATCTTGCTGAAGAAGTTTCAACATAGAGCTCCAAGTTTTGTTAATGTGCCTGAATTGACTTCTTCGGATCGCGAGTTGGAACGCACCTCCATCCCAGCACAAACTGAAGGCACTCCACCACATGATGAATAA

Protein Analysis

823

Amino Acids

92.81

Weight (kDa)

6.99

Isoelectric Point (pI)

33.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 53 - 351 3.3e-20 Receptor family ligand binding region
Peripla_BP_6 PF13458 60 - 124 9.4e-06 Periplasmic binding protein
Lig_chan PF00060 534 - 769 4.1e-26 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1597
AccII CGCG 1 cut(s) 2412
AciI CCGC 1 cut(s) 1575
AclI AACGTT 1 cut(s) 126
AclWI GGATC 3 cut(s) 203, 1768, 2415
AcoI YGGCCR 1 cut(s) 389
AcsI RAATTY 6 cut(s) 182, 330, 886, 1154, 1637, 1985
AcuI CTGAAG 9 cut(s) 105, 114, 120, 255, 656, 959, 2207, 2369, 2466
AfaI GTAC 4 cut(s) 465, 811, 1055, 1926
AfiI CCNNNNNNNGG 4 cut(s) 315, 611, 1130, 1560
AhlI ACTAGT 1 cut(s) 953
AjnI CCWGG 3 cut(s) 1264, 1392, 1623
AjuI GAANNNNNNNTTGG 2 cut(s) 1168, 1200
Alw21I GWGCWC 4 cut(s) 136, 328, 2055, 2371
Alw26I GTCTC 3 cut(s) 275, 732, 1114
AlwI GGATC 3 cut(s) 203, 1768, 2415
Ama87I CYCGRG 4 cut(s) 654, 1190, 1737, 2139
AoxI GGCC 5 cut(s) 389, 939, 1187, 1405, 2284
ApeKI GCWGC 7 cut(s) 156, 221, 230, 296, 350, 422, 2009
ApoI RAATTY 6 cut(s) 182, 330, 886, 1154, 1637, 1985
ArsI GACNNNNNNTTYG 2 cut(s) 1380, 1412
Asp700I GAANNNNTTC 2 cut(s) 1097, 2039
AspLEI GCGC 1 cut(s) 1623
AspS9I GGNCC 4 cut(s) 1188, 1406, 2252, 2284
AsuC2I CCSGG 3 cut(s) 1191, 1192, 1562
AsuII TTCGAA 2 cut(s) 1347, 1989
AsuNHI GCTAGC 1 cut(s) 517
AvaI CYCGRG 4 cut(s) 654, 1190, 1737, 2139
AvaII GGWCC 1 cut(s) 2252
BalI TGGCCA 1 cut(s) 391
BanII GRGCYC 3 cut(s) 328, 1213, 2371
BbsI GAAGAC 1 cut(s) 652
Bbv12I GWGCWC 4 cut(s) 136, 328, 2055, 2371
BbvI GCAGC 7 cut(s) 168, 208, 217, 308, 362, 409, 1996
BccI CCATC 6 cut(s) 410, 485, 715, 1312, 2243, 2438
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BciT130I CCWGG 3 cut(s) 1266, 1394, 1625
BclI TGATCA 1 cut(s) 243
BcnI CCSGG 3 cut(s) 1191, 1192, 1562
BcoDI GTCTC 3 cut(s) 275, 732, 1114
BcuI ACTAGT 1 cut(s) 953
BfaI CTAG 5 cut(s) 518, 924, 954, 2105, 2162
BfmI CTRYAG 1 cut(s) 2089
BfoI RGCGCY 1 cut(s) 1624
BisI GCNGC 8 cut(s) 157, 222, 231, 297, 351, 423, 1576, 2010
BlpI GCTNAGC 1 cut(s) 1518
BlsI GCNGC 8 cut(s) 158, 223, 232, 298, 352, 424, 1577, 2011
BmcAI AGTACT 1 cut(s) 1926
Bme1390I CCNGG 6 cut(s) 1191, 1192, 1266, 1394, 1562, 1625
Bme18I GGWCC 1 cut(s) 2252
BmeT110I CYCGRG 4 cut(s) 654, 1190, 1737, 2139
BmgT120I GGNCC 4 cut(s) 1188, 1406, 2252, 2284
BmiI GGNNCC 5 cut(s) 320, 553, 1408, 1885, 2254
BmrFI CCNGG 6 cut(s) 1191, 1192, 1266, 1394, 1562, 1625
BmsI GCATC 8 cut(s) 58, 78, 496, 504, 574, 618, 1080, 1441
BmtI GCTAGC 1 cut(s) 521
BpiI GAAGAC 1 cut(s) 652
BpmI CTGGAG 1 cut(s) 2115
Bpu1102I GCTNAGC 1 cut(s) 1518
Bpu14I TTCGAA 2 cut(s) 1347, 1989
BpuMI CCSGG 3 cut(s) 1191, 1192, 1562
BsaI GGTCTC 1 cut(s) 1114
BsaJI CCNNGG 2 cut(s) 1190, 2151
BsaWI WCCGGW 1 cut(s) 1487
BsaXI ACNNNNNCTCC 2 cut(s) 1032, 1062
Bsc4I CCNNNNNNNGG 4 cut(s) 315, 611, 1130, 1560
Bse1I ACTGG 4 cut(s) 335, 775, 846, 2132
Bse3DI GCAATG 1 cut(s) 1233
BseBI CCWGG 3 cut(s) 1266, 1394, 1625
BseDI CCNNGG 2 cut(s) 1190, 2151
BseGI GGATG 4 cut(s) 69, 493, 519, 2430
BseLI CCNNNNNNNGG 4 cut(s) 315, 611, 1130, 1560
BseMI GCAATG 1 cut(s) 1233
BseMII CTCAG 2 cut(s) 800, 1509
BseNI ACTGG 4 cut(s) 335, 775, 846, 2132
BseRI GAGGAG 1 cut(s) 2189
BseXI GCAGC 7 cut(s) 168, 208, 217, 308, 362, 409, 1996
BseYI CCCAGC 5 cut(s) 509, 641, 1221, 1282, 2434
BsgI GTGCAG 1 cut(s) 1318
Bsh1236I CGCG 1 cut(s) 2412
BshFI GGCC 5 cut(s) 391, 941, 1189, 1407, 2286
BsiHKAI GWGCWC 4 cut(s) 136, 328, 2055, 2371
BsiHKCI CYCGRG 4 cut(s) 654, 1190, 1737, 2139
BsiSI CCGG 3 cut(s) 1191, 1488, 1561
BslFI GGGAC 2 cut(s) 738, 2115
BslI CCNNNNNNNGG 4 cut(s) 315, 611, 1130, 1560
BsmAI GTCTC 3 cut(s) 275, 732, 1114
BsmFI GGGAC 2 cut(s) 738, 2115
BsmI GAATGC 1 cut(s) 2039
BsnI GGCC 5 cut(s) 391, 941, 1189, 1407, 2286
Bso31I GGTCTC 1 cut(s) 1114
BsoBI CYCGRG 4 cut(s) 654, 1190, 1737, 2139
Bsp119I TTCGAA 2 cut(s) 1347, 1989
Bsp1286I GDGCHC 5 cut(s) 136, 328, 1213, 2055, 2371
Bsp1407I TGTACA 1 cut(s) 463
Bsp1720I GCTNAGC 1 cut(s) 1518
Bsp68I TCGCGA 1 cut(s) 2412
BspACI CCGC 1 cut(s) 1575
BspANI GGCC 5 cut(s) 391, 941, 1189, 1407, 2286
BspCNI CTCAG 2 cut(s) 799, 1510
BspFNI CGCG 1 cut(s) 2412
BspHI TCATGA 2 cut(s) 796, 2043
BspLI GGNNCC 5 cut(s) 320, 553, 1408, 1885, 2254
BspOI GCTAGC 1 cut(s) 521
BspPI GGATC 3 cut(s) 203, 1768, 2415
BspQI GCTCTTC 1 cut(s) 901
BspT104I TTCGAA 2 cut(s) 1347, 1989
BspTNI GGTCTC 1 cut(s) 1114
BsrDI GCAATG 1 cut(s) 1233
BsrGI TGTACA 1 cut(s) 463
BsrI ACTGG 4 cut(s) 335, 775, 846, 2132
BssECI CCNNGG 2 cut(s) 1190, 2151
BssT1I CCWWGG 1 cut(s) 2151
Bst2UI CCWGG 3 cut(s) 1266, 1394, 1625
Bst4CI ACNGT 7 cut(s) 25, 468, 691, 1180, 1328, 1364, 1964
Bst6I CTCTTC 3 cut(s) 618, 730, 901
BstAUI TGTACA 1 cut(s) 463
BstBI TTCGAA 2 cut(s) 1347, 1989
BstC8I GCNNGC 2 cut(s) 412, 519
BstDEI CTNAG 4 cut(s) 786, 1199, 1518, 1536
BstF5I GGATG 4 cut(s) 69, 493, 519, 2430
BstFNI CGCG 1 cut(s) 2412
BstH2I RGCGCY 1 cut(s) 1624
BstHHI GCGC 1 cut(s) 1623
BstMAI GTCTC 3 cut(s) 275, 732, 1114
BstMWI GCNNNNNNNGC 3 cut(s) 227, 230, 305
BstNI CCWGG 3 cut(s) 1266, 1394, 1625
BstNSI RCATGY 1 cut(s) 156
BstSCI CCNGG 6 cut(s) 1189, 1190, 1264, 1392, 1560, 1623
BstSFI CTRYAG 1 cut(s) 2089
BstUI CGCG 1 cut(s) 2412
BstV1I GCAGC 7 cut(s) 168, 208, 217, 308, 362, 409, 1996
BstV2I GAAGAC 1 cut(s) 652
BstX2I RGATCY 1 cut(s) 208
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 1 cut(s) 208
BsuRI GGCC 5 cut(s) 391, 941, 1189, 1407, 2286
BtgZI GCGATG 1 cut(s) 429
BtsCI GGATG 4 cut(s) 69, 493, 519, 2430
BtsIMutI CAGTG 4 cut(s) 342, 441, 696, 1648
BtuMI TCGCGA 1 cut(s) 2412
Cac8I GCNNGC 2 cut(s) 412, 519
CciI TCATGA 2 cut(s) 796, 2043
CfoI GCGC 1 cut(s) 1623
Cfr13I GGNCC 4 cut(s) 1188, 1406, 2252, 2284
Cfr9I CCCGGG 1 cut(s) 1190
CsiI ACCWGGT 1 cut(s) 1392
Csp6I GTAC 4 cut(s) 464, 810, 1054, 1925
CspCI CAANNNNNGTGG 2 cut(s) 368, 403
CviAII CATG 9 cut(s) 153, 797, 891, 943, 1009, 1530, 1785, 2044, 2462
CviQI GTAC 4 cut(s) 464, 810, 1054, 1925
DdeI CTNAG 4 cut(s) 786, 1199, 1518, 1536
EaeI YGGCCR 1 cut(s) 389
Eam1104I CTCTTC 3 cut(s) 618, 730, 901
EarI CTCTTC 3 cut(s) 618, 730, 901
Ecl136II GAGCTC 2 cut(s) 326, 2369
Eco130I CCWWGG 1 cut(s) 2151
Eco24I GRGCYC 3 cut(s) 328, 1213, 2371
Eco31I GGTCTC 1 cut(s) 1114
Eco32I GATATC 1 cut(s) 1468
Eco47I GGWCC 1 cut(s) 2252
Eco53kI GAGCTC 2 cut(s) 326, 2369
Eco57I CTGAAG 9 cut(s) 105, 114, 120, 255, 656, 959, 2207, 2369, 2466
Eco88I CYCGRG 4 cut(s) 654, 1190, 1737, 2139
EcoICRI GAGCTC 2 cut(s) 326, 2369
EcoRI GAATTC 3 cut(s) 886, 1637, 1985
EcoRII CCWGG 3 cut(s) 1264, 1392, 1623
EcoRV GATATC 1 cut(s) 1468
EcoT14I CCWWGG 1 cut(s) 2151
EcoT38I GRGCYC 3 cut(s) 328, 1213, 2371
ErhI CCWWGG 1 cut(s) 2151
FaeI CATG 9 cut(s) 156, 800, 894, 946, 1012, 1533, 1788, 2047, 2465
FaqI GGGAC 2 cut(s) 738, 2115
FatI CATG 9 cut(s) 152, 796, 890, 942, 1008, 1529, 1784, 2043, 2461
FauNDI CATATG 1 cut(s) 2029
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 1 cut(s) 1597
Fnu4HI GCNGC 8 cut(s) 157, 222, 231, 297, 351, 423, 1576, 2010
FokI GGATG 4 cut(s) 56, 500, 526, 2417
FriOI GRGCYC 3 cut(s) 328, 1213, 2371
Fsp4HI GCNGC 8 cut(s) 157, 222, 231, 297, 351, 423, 1576, 2010
FspBI CTAG 5 cut(s) 518, 924, 954, 2105, 2162
GlaI GCGC 1 cut(s) 1622
GluI GCNGC 8 cut(s) 157, 222, 231, 297, 351, 423, 1576, 2010
GsaI CCCAGC 5 cut(s) 513, 645, 1225, 1286, 2438
GsuI CTGGAG 1 cut(s) 2115
HaeII RGCGCY 1 cut(s) 1624
HaeIII GGCC 5 cut(s) 391, 941, 1189, 1407, 2286
HapII CCGG 3 cut(s) 1191, 1488, 1561
HhaI GCGC 1 cut(s) 1623
Hin1II CATG 9 cut(s) 156, 800, 894, 946, 1012, 1533, 1788, 2047, 2465
Hin6I GCGC 1 cut(s) 1621
HinP1I GCGC 1 cut(s) 1621
HincII GTYRAC 3 cut(s) 28, 1324, 2211
HindII GTYRAC 3 cut(s) 28, 1324, 2211
HindIII AAGCTT 1 cut(s) 635
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 3 cut(s) 1191, 1488, 1561
Hpy166II GTNNAC 8 cut(s) 28, 776, 1205, 1324, 1360, 1546, 1598, 2211
Hpy188I TCNGA 8 cut(s) 85, 789, 921, 1160, 1662, 2121, 2248, 2407
Hpy188III TCNNGA 9 cut(s) 139, 194, 797, 823, 1634, 2044, 2141, 2162, 2411
Hpy8I GTNNAC 8 cut(s) 28, 776, 1205, 1324, 1360, 1546, 1598, 2211
HpyCH4III ACNGT 7 cut(s) 25, 468, 691, 1180, 1328, 1364, 1964
HpyCH4IV ACGT 3 cut(s) 126, 546, 2268
HpyCH4V TGCA 7 cut(s) 156, 350, 379, 988, 1335, 1381, 2240
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 230, 305
HpyF3I CTNAG 4 cut(s) 786, 1199, 1518, 1536
HpySE526I ACGT 3 cut(s) 126, 546, 2268
Hsp92II CATG 9 cut(s) 156, 800, 894, 946, 1012, 1533, 1788, 2047, 2465
HspAI GCGC 1 cut(s) 1621
Ksp22I TGATCA 1 cut(s) 243
KspAI GTTAAC 1 cut(s) 28
LguI GCTCTTC 1 cut(s) 901
LmnI GCTCC 5 cut(s) 89, 131, 1618, 1889, 2374
Lsp1109I GCAGC 7 cut(s) 168, 208, 217, 308, 362, 409, 1996
LweI GCATC 8 cut(s) 58, 78, 496, 504, 574, 618, 1080, 1441
MabI ACCWGGT 1 cut(s) 1392
MaeI CTAG 5 cut(s) 518, 924, 954, 2105, 2162
MaeII ACGT 3 cut(s) 126, 546, 2268
MaeIII GTNAC 7 cut(s) 534, 691, 931, 956, 1787, 1840, 2190
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 5 cut(s) 136, 328, 1213, 2055, 2371
MlsI TGGCCA 1 cut(s) 391
MluNI TGGCCA 1 cut(s) 391
MlyI GAGTC 5 cut(s) 163, 542, 734, 1493, 2120
MmeI TCCRAC 4 cut(s) 109, 1153, 1995, 2397
Mox20I TGGCCA 1 cut(s) 391
MroXI GAANNNNTTC 2 cut(s) 1097, 2039
MscI TGGCCA 1 cut(s) 391
MseI TTAA 6 cut(s) 27, 215, 1016, 1299, 1733, 2382
MslI CAYNNNNRTG 2 cut(s) 947, 1853
Msp20I TGGCCA 1 cut(s) 391
MspI CCGG 3 cut(s) 1191, 1488, 1561
MspR9I CCNGG 6 cut(s) 1191, 1192, 1266, 1394, 1562, 1625
Mva1269I GAATGC 1 cut(s) 2039
MvaI CCWGG 3 cut(s) 1266, 1394, 1625
MvnI CGCG 1 cut(s) 2412
MwoI GCNNNNNNNGC 3 cut(s) 227, 230, 305
NciI CCSGG 3 cut(s) 1191, 1192, 1562
NdeI CATATG 1 cut(s) 2029
NheI GCTAGC 1 cut(s) 517
NlaIII CATG 9 cut(s) 156, 800, 894, 946, 1012, 1533, 1788, 2047, 2465
NlaIV GGNNCC 5 cut(s) 320, 553, 1408, 1885, 2254
NmeAIII GCCGAG 1 cut(s) 722
NmuCI GTSAC 3 cut(s) 534, 691, 2190
NruI TCGCGA 1 cut(s) 2412
NspI RCATGY 1 cut(s) 156
NspV TTCGAA 2 cut(s) 1347, 1989
PaeR7I CTCGAG 1 cut(s) 1737
PagI TCATGA 2 cut(s) 796, 2043
PciSI GCTCTTC 1 cut(s) 901
PctI GAATGC 1 cut(s) 2039
PdmI GAANNNNTTC 2 cut(s) 1097, 2039
PfeI GAWTC 7 cut(s) 33, 197, 819, 927, 1195, 1895, 1967
PkrI GCNGC 8 cut(s) 158, 223, 232, 298, 352, 424, 1577, 2011
PleI GAGTC 5 cut(s) 163, 541, 734, 1492, 2120
PpsI GAGTC 5 cut(s) 163, 541, 734, 1492, 2120
Psp124BI GAGCTC 2 cut(s) 328, 2371
Psp1406I AACGTT 1 cut(s) 126
Psp6I CCWGG 3 cut(s) 1264, 1392, 1623
PspFI CCCAGC 5 cut(s) 509, 641, 1221, 1282, 2434
PspGI CCWGG 3 cut(s) 1264, 1392, 1623
PspN4I GGNNCC 5 cut(s) 320, 553, 1408, 1885, 2254
PspPI GGNCC 4 cut(s) 1188, 1406, 2252, 2284
PspXI VCTCGAGB 1 cut(s) 1737
PsuI RGATCY 1 cut(s) 208
RruI TCGCGA 1 cut(s) 2412
RsaI GTAC 4 cut(s) 465, 811, 1055, 1926
RsaNI GTAC 4 cut(s) 464, 810, 1054, 1925
RseI CAYNNNNRTG 2 cut(s) 947, 1853
SacI GAGCTC 2 cut(s) 328, 2371
SapI GCTCTTC 1 cut(s) 901
SaqAI TTAA 6 cut(s) 27, 215, 1016, 1299, 1733, 2382
SatI GCNGC 8 cut(s) 157, 222, 231, 297, 351, 423, 1576, 2010
Sau96I GGNCC 4 cut(s) 1188, 1406, 2252, 2284
ScaI AGTACT 1 cut(s) 1926
SchI GAGTC 5 cut(s) 163, 542, 734, 1493, 2120
ScrFI CCNGG 6 cut(s) 1191, 1192, 1266, 1394, 1562, 1625
SduI GDGCHC 5 cut(s) 136, 328, 1213, 2055, 2371
SexAI ACCWGGT 1 cut(s) 1392
SfaNI GCATC 8 cut(s) 58, 78, 496, 504, 574, 618, 1080, 1441
SfcI CTRYAG 1 cut(s) 2089
Sfr274I CTCGAG 1 cut(s) 1737
SfuI TTCGAA 2 cut(s) 1347, 1989
SinI GGWCC 1 cut(s) 2252
SlaI CTCGAG 1 cut(s) 1737
SmaI CCCGGG 1 cut(s) 1192
SmiMI CAYNNNNRTG 2 cut(s) 947, 1853
SmlI CTYRAG 1 cut(s) 1737
SmoI CTYRAG 1 cut(s) 1737
SpeI ACTAGT 1 cut(s) 953
SsiI CCGC 1 cut(s) 1575
SspI AATATT 1 cut(s) 1065
SspMI CTAG 5 cut(s) 518, 924, 954, 2105, 2162
SstI GAGCTC 2 cut(s) 328, 2371
StyD4I CCNGG 6 cut(s) 1189, 1190, 1264, 1392, 1560, 1623
StyI CCWWGG 1 cut(s) 2151
TaaI ACNGT 7 cut(s) 25, 468, 691, 1180, 1328, 1364, 1964
TaiI ACGT 3 cut(s) 129, 549, 2271
TaqI TCGA 8 cut(s) 193, 899, 1339, 1347, 1482, 1738, 1851, 1989
TatI WGTACW 3 cut(s) 463, 1053, 1924
TauI GCSGC 1 cut(s) 1578
TfiI GAWTC 7 cut(s) 33, 197, 819, 927, 1195, 1895, 1967
Tru1I TTAA 6 cut(s) 27, 215, 1016, 1299, 1733, 2382
Tru9I TTAA 6 cut(s) 27, 215, 1016, 1299, 1733, 2382
TscAI CASTG 4 cut(s) 342, 448, 696, 1648
TseFI GTSAC 3 cut(s) 534, 691, 2190
TseI GCWGC 7 cut(s) 156, 221, 230, 296, 350, 422, 2009
Tsp45I GTSAC 3 cut(s) 534, 691, 2190
TspDTI ATGAA 8 cut(s) 333, 446, 652, 879, 899, 1887, 2032, 2060
TspMI CCCGGG 1 cut(s) 1190
TspRI CASTG 4 cut(s) 342, 448, 696, 1648
VpaK11BI GGWCC 1 cut(s) 2252
XapI RAATTY 6 cut(s) 182, 330, 886, 1154, 1637, 1985
XbaI TCTAGA 1 cut(s) 2161
XceI RCATGY 1 cut(s) 156
XcmI CCANNNNNNNNNTGG 1 cut(s) 1400
XhoI CTCGAG 1 cut(s) 1737
XmaI CCCGGG 1 cut(s) 1190
XmiI GTMKAC 1 cut(s) 1597
XmnI GAANNNNTTC 2 cut(s) 1097, 2039
XspI CTAG 5 cut(s) 518, 924, 954, 2105, 2162
ZrmI AGTACT 1 cut(s) 1926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.