Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Reverse (-)

58811889 .. 58815514

Gene Structure 3626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034996

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCTATTCCTTGTACCAATACCTCTAACAAAATCCAAAGACTTTGGCTCCTGCTTCCTCTGCTCATCATCATCACCATGATCACTCTCTCAGATGTTGCTGAAGCTGAAAATGAGAAAATTATCATCAATGTTGGAGCAATCGTTAATATGAACACTCGTCTGGGTAAAGAACAGAAAACTGCTATGGGTATTGCAGCGGACAGCTTCAGCAGCCTTTCAAAGACTCATAGCCTAATCCTTCATTTTCGACATTCTGACAGAGATCCCTTAATTGCTGCATCTGCTGCTAAAGAGTTGATAAAAGATCAGAACGTAAAGCTGATAATTGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATGTGGGGAACCGAACTCAAGTTCCAGTGATTTCATTTGCAGCACCTACTATAAACCCACCTCTATTACAACATGACTGGCCATTTTTGATACGAGTGGCAAGCGATCGTGCTGCTCAGATGAAATGCATCACAGATGTAGTGTCTTTGTACACTTGGAAAAGGGTTATTGTTATATACCAGGATGACGGTTACGGTGGTGATGCTGGGATGCTAGCTGTTTTATCTGAGGCTCTCCAAGACGTTGGCTCAAAGATTGAGCATTATTTGGTTCTCCCACGGGTTTCTTCTTTGTCTAATCCTAGTTGGGGTGAACTAGAAGAGATGTTGAAGCTTCCGACCTTTCAATCTCGGGTGTTCATTGTTCTCCAGTCGTCTTTCCCAGCAGTCACTAATCTATTCAGGGTGGCAAAAAAGATGGGACTTGTAGGAAGAGACTCAGCTTGGATAATCACAGTGAGTATTACAAGTTTGCTCGACTCTCAAGTCAATCATGGTATGGAAGGTACTTTGGGAATCAAGTCCTACTATGCCAATAATACTAGTTCCTATGCTAAGTTTGTAGAGGTATTCCAAACAAGATTTCCAGAAGAAGATGACTCCAAGCCAGGAATTTATGCTCTTCGAGCATACGATCTTATTATAATCGTATCACAGGCCATAAGGAACACTACTAACAGTACTGACCTTCAGGTGTTGTTAAATACAGTACAGAACAATTATATGGGTTTAAGTGGCAAAATGTACTGCAAAAGAGGTGAAGTATTGTACACTCCAATATTCAGGATCATAAATATTGTGGAAGGGAACAGATACAAAGAATTGGACTTTTGGAGACCAGAGGTTGGGTTCTCACAGAGCCTTTCAAAAGAGACGAGCAAAAACAGAAGTGATGATGTTGGTACAGTAGTTTGGCCCGGCAACCTAACTGAACGAGCCCCTAAAGGCTGGGCAATGCCCACTGCAATAAAGCCCTTGAGAATTGTGGTTCCAGGTAGAACTTCCTTCAGTGCATTTGTAAAGGTCGATAAAATGAAGAACACTCTGCACTATGACGGTTTCTGCATTCAAATTTTTTACAAGGTGCTAAGTCGCTTGGGCTATCCTCTGCCATATGAGCTCCATGCCGTTAATGCCTCCTATGATGATATGGTAGAACAAGTTCATAACAAGTCCATGTGCTCCCATGCGGGATTCAGGTCCTCTTACTTAACAGCAGGCATGTGCTTTAATTCTTATAACACAAGAGAGAAAATCCATAACAACTTAACTCGAGTAGTTGTTGTAATGTGGCTGTTTGTTGTATTAATCCTAACCTCAAGCTACACCGCTAATTTGTCGTCAATGCTCACCATCCAACGATTGAAACCAAATATAACAGACATCGAAATGCTAAAGAGAACCAACTCAAAGGTTGGCTTGGATGGGGATTCATTTGTCGTAACTTACTTGGAGAGTTTACTTCAATTCAATTCACAGAGCATCATCACAATAAGCAGTGAATTCAAGTACACAGAGGCATTTAAAAACAGAAGTATATCTGCTGCCTTTCTTGAACTCCCATATGCTAAAGTATTCATGAACCACTACTGCAAGGGATATACTGCGACCACACCCAGCTATAGATTTGGAGGACTAGGCTTTATATTTCAGAAAGGCTCTCCAATTGCCCGGGATTTCACCAAGGCCATTCTAGAGTTATTGGAGGATGGAGAACTGAAGTCACTTGAAGATACTTGGTTGACACCAAATCGTGACTGTCCAAATAATGCAAGTTCTGATGTTCCAGATAGCTTGAGCGTCAAGAATTTTATGGGCCTTTATGTAATATCCAGCGCTACTTCTACCATTTGCCTTCTATTATCCTTCACTATCTTGCTGAAGAAGTTTCAACAACACGAGGATGCATACCTAGGCAATCCAAGTGATGAAAGTGTTTGGAACAGGACAGTTAGAATAGCAAGATTCCTATATAATAAAGAGTTCAATGTTCCAAGCAGAGCTCCAAGTATTGTTGATGTGCCAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

799

Amino Acids

89.55

Weight (kDa)

8.46

Isoelectric Point (pI)

37.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	60 - 372	7.1e-35	Receptor family ligand binding region
Peripla_BP_6	PF13458	88 - 355	1.1e-14	Periplasmic binding protein
Lig_chan	PF00060	518 - 733	1.5e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1010, 1605
AasI	GACNNNNNNGTC	1 cut(s)	851
AccB7I	CCANNNNNTGG	1 cut(s)	1211
AciI	CCGC	3 cut(s)	200, 1556, 1695
AclWI	GGATC	2 cut(s)	260, 1160
AcoI	YGGCCR	1 cut(s)	446
AcsI	RAATTY	4 cut(s)	978, 1437, 1868, 2173
AcuI	CTGAAG	6 cut(s)	123, 193, 1040, 1357, 2105, 2267
AfaI	GTAC	9 cut(s)	16, 518, 874, 1048, 1077, 1112, 1136, 1270, 1877
AfeI	AGCGCT	1 cut(s)	2203
AfiI	CCNNNNNNNGG	2 cut(s)	674, 1211
AhlI	ACTAGT	1 cut(s)	908
AjnI	CCWGG	3 cut(s)	546, 973, 1357
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
AloI	GAACNNNNNNTCC	2 cut(s)	373, 405
Alw21I	GWGCWC	3 cut(s)	1488, 1550, 2371
Alw26I	GTCTC	4 cut(s)	332, 795, 1195, 1232
AlwI	GGATC	2 cut(s)	260, 1160
Ama87I	CYCGRG	3 cut(s)	717, 1638, 2037
Aor51HI	AGCGCT	1 cut(s)	2203
AoxI	GGCC	5 cut(s)	446, 1023, 1280, 2052, 2182
ApeKI	GCWGC	8 cut(s)	197, 213, 278, 287, 353, 407, 479, 1910
ApoI	RAATTY	4 cut(s)	978, 1437, 1868, 2173
AseI	ATTAAT	1 cut(s)	1673
Asp700I	GAANNNNTTC	1 cut(s)	1527
AspA2I	CCTAGG	1 cut(s)	2278
AspLEI	GCGC	1 cut(s)	2204
AspS9I	GGNCC	3 cut(s)	1281, 1566, 2182
AsuC2I	CCSGG	3 cut(s)	1284, 2038, 2039
AsuHPI	GGTGA	6 cut(s)	67, 578, 689, 1136, 1708, 2038
AsuNHI	GCTAGC	1 cut(s)	580
AvaI	CYCGRG	3 cut(s)	717, 1638, 2037
AvaII	GGWCC	1 cut(s)	1566
AvrII	CCTAGG	1 cut(s)	2278
BaeI	ACNNNNGTAYC	2 cut(s)	1260, 1293
BalI	TGGCCA	1 cut(s)	448
BanII	GRGCYC	3 cut(s)	1306, 1488, 2371
BauI	CACGAG	1 cut(s)	2264
Bbv12I	GWGCWC	3 cut(s)	1488, 1550, 2371
BbvI	GCAGC	8 cut(s)	209, 225, 265, 274, 365, 419, 466, 1897
BccI	CCATC	4 cut(s)	778, 1727, 1784, 2069
BceAI	ACGGC	1 cut(s)	1478
BcgI	CGANNNNNNTGC	2 cut(s)	461, 495
BciT130I	CCWGG	3 cut(s)	548, 975, 1359
BclI	TGATCA	1 cut(s)	81
BcnI	CCSGG	3 cut(s)	1284, 2038, 2039
BcoDI	GTCTC	4 cut(s)	332, 795, 1195, 1232
BcuI	ACTAGT	1 cut(s)	908
BfaI	CTAG	8 cut(s)	359, 581, 669, 683, 909, 2003, 2060, 2279
BfmI	CTRYAG	1 cut(s)	1987
BfoI	RGCGCY	1 cut(s)	2205
BisI	GCNGC	8 cut(s)	198, 214, 279, 288, 354, 408, 480, 1911
BlnI	CCTAGG	1 cut(s)	2278
BlsI	GCNGC	8 cut(s)	199, 215, 280, 289, 355, 409, 481, 1912
BmcAI	AGTACT	1 cut(s)	1048
Bme1390I	CCNGG	6 cut(s)	548, 975, 1284, 1359, 2038, 2039
Bme18I	GGWCC	1 cut(s)	1566
BmeT110I	CYCGRG	3 cut(s)	717, 1638, 2037
BmgT120I	GGNCC	3 cut(s)	1281, 1566, 2182
BmiI	GGNNCC	3 cut(s)	50, 377, 1356
BmrFI	CCNGG	6 cut(s)	548, 975, 1284, 1359, 2038, 2039
BmsI	GCATC	6 cut(s)	290, 504, 559, 567, 1857, 2260
BmtI	GCTAGC	1 cut(s)	584
BpmI	CTGGAG	1 cut(s)	719
BpuEI	CTTGAG	5 cut(s)	369, 834, 1363, 1669, 2182
BpuMI	CCSGG	3 cut(s)	1284, 2038, 2039
BsaI	GGTCTC	1 cut(s)	1195
BsaJI	CCNNGG	4 cut(s)	644, 2037, 2049, 2278
BsaXI	ACNNNNNCTCC	4 cut(s)	33, 63, 129, 159
Bsc4I	CCNNNNNNNGG	2 cut(s)	674, 1211
Bse1I	ACTGG	3 cut(s)	392, 449, 736
Bse3DI	GCAATG	1 cut(s)	1326
BseBI	CCWGG	3 cut(s)	548, 975, 1359
BseDI	CCNNGG	4 cut(s)	644, 2037, 2049, 2278
BseGI	GGATG	6 cut(s)	556, 582, 1719, 1795, 2080, 2275
BseLI	CCNNNNNNNGG	2 cut(s)	674, 1211
BseMI	GCAATG	1 cut(s)	1326
BseMII	CTCAG	4 cut(s)	105, 497, 585, 819
BseNI	ACTGG	3 cut(s)	392, 449, 736
BseXI	GCAGC	8 cut(s)	209, 225, 265, 274, 365, 419, 466, 1897
BseYI	CCCAGC	4 cut(s)	572, 748, 1314, 1982
BsgI	GTGCAG	1 cut(s)	1397
Bsh1285I	CGRYCG	1 cut(s)	475
BshFI	GGCC	5 cut(s)	448, 1025, 1282, 2054, 2184
BsiEI	CGRYCG	1 cut(s)	475
BsiHKAI	GWGCWC	3 cut(s)	1488, 1550, 2371
BsiHKCI	CYCGRG	3 cut(s)	717, 1638, 2037
BsiSI	CCGG	2 cut(s)	1284, 2038
BslFI	GGGAC	1 cut(s)	801
BslI	CCNNNNNNNGG	2 cut(s)	674, 1211
BsmAI	GTCTC	4 cut(s)	332, 795, 1195, 1232
BsmBI	CGTCTC	1 cut(s)	1232
BsmFI	GGGAC	1 cut(s)	801
BsmI	GAATGC	1 cut(s)	1431
BsnI	GGCC	5 cut(s)	448, 1025, 1282, 2054, 2184
Bso31I	GGTCTC	1 cut(s)	1195
BsoBI	CYCGRG	3 cut(s)	717, 1638, 2037
Bsp1286I	GDGCHC	4 cut(s)	1306, 1488, 1550, 2371
Bsp1407I	TGTACA	2 cut(s)	516, 1134
Bsp143I	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
BspACI	CCGC	3 cut(s)	200, 1556, 1695
BspANI	GGCC	5 cut(s)	448, 1025, 1282, 2054, 2184
BspCNI	CTCAG	4 cut(s)	104, 496, 586, 818
BspHI	TCATGA	1 cut(s)	1944
BspLI	GGNNCC	3 cut(s)	50, 377, 1356
BspOI	GCTAGC	1 cut(s)	584
BspPI	GGATC	2 cut(s)	260, 1160
BspQI	GCTCTTC	1 cut(s)	993
BspTNI	GGTCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	1326
BsrGI	TGTACA	2 cut(s)	516, 1134
BsrI	ACTGG	3 cut(s)	392, 449, 736
BssECI	CCNNGG	4 cut(s)	644, 2037, 2049, 2278
BssMI	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
BssSI	CACGAG	1 cut(s)	2264
BssT1I	CCWWGG	2 cut(s)	2049, 2278
Bst2BI	CACGAG	1 cut(s)	2264
Bst2UI	CCWGG	3 cut(s)	548, 975, 1359
Bst4CI	ACNGT	9 cut(s)	557, 563, 823, 1046, 1075, 1273, 1424, 2126, 2317
Bst6I	CTCTTC	3 cut(s)	681, 793, 993
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstAUI	TGTACA	2 cut(s)	516, 1134
BstC8I	GCNNGC	3 cut(s)	469, 582, 1585
BstDEI	CTNAG	6 cut(s)	91, 483, 594, 805, 921, 1454
BstDSI	CCRYGG	1 cut(s)	644
BstF5I	GGATG	6 cut(s)	556, 582, 1719, 1795, 2080, 2275
BstH2I	RGCGCY	1 cut(s)	2205
BstHHI	GCGC	1 cut(s)	2204
BstKTI	GATC	6 cut(s)	84, 268, 310, 475, 1003, 1155
BstMAI	GTCTC	4 cut(s)	332, 795, 1195, 1232
BstMBI	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
BstMCI	CGRYCG	1 cut(s)	475
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 213, 284, 287, 362, 992, 1483, 1499
BstNI	CCWGG	3 cut(s)	548, 975, 1359
BstNSI	RCATGY	1 cut(s)	1591
BstSCI	CCNGG	6 cut(s)	546, 973, 1282, 1357, 2036, 2037
BstSFI	CTRYAG	1 cut(s)	1987
BstV1I	GCAGC	8 cut(s)	209, 225, 265, 274, 365, 419, 466, 1897
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	1 cut(s)	611
BstYI	RGATCY	1 cut(s)	265
BsuRI	GGCC	5 cut(s)	448, 1025, 1282, 2054, 2184
BtgI	CCRYGG	1 cut(s)	644
BtsCI	GGATG	6 cut(s)	556, 582, 1719, 1795, 2080, 2275
BtsI	GCAGTG	2 cut(s)	1326, 1870
BtsIMutI	CAGTG	5 cut(s)	399, 828, 1326, 1381, 1870
Cac8I	GCNNGC	3 cut(s)	469, 582, 1585
CciI	TCATGA	1 cut(s)	1944
CfoI	GCGC	1 cut(s)	2204
Cfr13I	GGNCC	3 cut(s)	1281, 1566, 2182
Cfr9I	CCCGGG	1 cut(s)	2037
CseI	GACGC	1 cut(s)	2155
Csp6I	GTAC	9 cut(s)	15, 517, 873, 1047, 1076, 1111, 1135, 1269, 1876
CviAII	CATG	9 cut(s)	79, 334, 440, 860, 1490, 1543, 1553, 1588, 1945
CviQI	GTAC	9 cut(s)	15, 517, 873, 1047, 1076, 1111, 1135, 1269, 1876
DdeI	CTNAG	6 cut(s)	91, 483, 594, 805, 921, 1454
DpnI	GATC	6 cut(s)	83, 267, 309, 474, 1002, 1154
DpnII	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
DraI	TTTAAA	1 cut(s)	1891
DrdI	GACNNNNNNGTC	1 cut(s)	851
DseDI	GACNNNNNNGTC	1 cut(s)	851
EaeI	YGGCCR	1 cut(s)	446
Eam1104I	CTCTTC	3 cut(s)	681, 793, 993
EarI	CTCTTC	3 cut(s)	681, 793, 993
Ecl136II	GAGCTC	2 cut(s)	1486, 2369
Eco130I	CCWWGG	2 cut(s)	2049, 2278
Eco24I	GRGCYC	3 cut(s)	1306, 1488, 2371
Eco31I	GGTCTC	1 cut(s)	1195
Eco47I	GGWCC	1 cut(s)	1566
Eco47III	AGCGCT	1 cut(s)	2203
Eco53kI	GAGCTC	2 cut(s)	1486, 2369
Eco57I	CTGAAG	6 cut(s)	123, 193, 1040, 1357, 2105, 2267
Eco88I	CYCGRG	3 cut(s)	717, 1638, 2037
EcoICRI	GAGCTC	2 cut(s)	1486, 2369
EcoO109I	RGGNCCY	1 cut(s)	1566
EcoRI	GAATTC	1 cut(s)	1868
EcoRII	CCWGG	3 cut(s)	546, 973, 1357
EcoT14I	CCWWGG	2 cut(s)	2049, 2278
EcoT22I	ATGCAT	2 cut(s)	497, 2275
EcoT38I	GRGCYC	3 cut(s)	1306, 1488, 2371
ErhI	CCWWGG	2 cut(s)	2049, 2278
Esp3I	CGTCTC	1 cut(s)	1232
FaeI	CATG	9 cut(s)	82, 337, 443, 863, 1493, 1546, 1556, 1591, 1948
FalI	AAGNNNNNCTT	2 cut(s)	1769, 1801
FaqI	GGGAC	1 cut(s)	801
FatI	CATG	9 cut(s)	78, 333, 439, 859, 1489, 1542, 1552, 1587, 1944
FauI	CCCGC	1 cut(s)	1549
FauNDI	CATATG	2 cut(s)	1480, 1930
FbaI	TGATCA	1 cut(s)	81
Fnu4HI	GCNGC	8 cut(s)	198, 214, 279, 288, 354, 408, 480, 1911
FokI	GGATG	6 cut(s)	563, 589, 1706, 1802, 2087, 2282
FriOI	GRGCYC	3 cut(s)	1306, 1488, 2371
Fsp4HI	GCNGC	8 cut(s)	198, 214, 279, 288, 354, 408, 480, 1911
FspBI	CTAG	8 cut(s)	359, 581, 669, 683, 909, 2003, 2060, 2279
GlaI	GCGC	1 cut(s)	2203
GluI	GCNGC	8 cut(s)	198, 214, 279, 288, 354, 408, 480, 1911
GsaI	CCCAGC	4 cut(s)	576, 752, 1318, 1986
GsuI	CTGGAG	1 cut(s)	719
HaeII	RGCGCY	1 cut(s)	2205
HaeIII	GGCC	5 cut(s)	448, 1025, 1282, 2054, 2184
HapII	CCGG	2 cut(s)	1284, 2038
HgaI	GACGC	1 cut(s)	2155
HhaI	GCGC	1 cut(s)	2204
Hin1II	CATG	9 cut(s)	82, 337, 443, 863, 1493, 1546, 1556, 1591, 1948
Hin6I	GCGC	1 cut(s)	2202
HinP1I	GCGC	1 cut(s)	2202
HincII	GTYRAC	1 cut(s)	2109
HindII	GTYRAC	1 cut(s)	2109
HindIII	AAGCTT	1 cut(s)	698
HinfI	GANTC	8 cut(s)	226, 803, 845, 882, 965, 1560, 1796, 2331
HpaII	CCGG	2 cut(s)	1284, 2038
HphI	GGTGA	6 cut(s)	67, 578, 689, 1136, 1708, 2038
Hpy166II	GTNNAC	6 cut(s)	519, 680, 1137, 1826, 1878, 2109
Hpy188I	TCNGA	8 cut(s)	94, 259, 312, 486, 595, 705, 2019, 2146
Hpy188III	TCNNGA	8 cut(s)	953, 1150, 1919, 1945, 2060, 2120, 2153, 2170
Hpy8I	GTNNAC	6 cut(s)	519, 680, 1137, 1826, 1878, 2109
HpyAV	CCTTC	7 cut(s)	251, 863, 1064, 1163, 1381, 2231, 2242
HpyCH4III	ACNGT	9 cut(s)	557, 563, 823, 1046, 1075, 1273, 1424, 2126, 2317
HpyCH4IV	ACGT	2 cut(s)	315, 609
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 213, 284, 287, 362, 992, 1483, 1499
HpyF3I	CTNAG	6 cut(s)	91, 483, 594, 805, 921, 1454
HpySE526I	ACGT	2 cut(s)	315, 609
Hsp92II	CATG	9 cut(s)	82, 337, 443, 863, 1493, 1546, 1556, 1591, 1948
HspAI	GCGC	1 cut(s)	2202
Ksp22I	TGATCA	1 cut(s)	81
Kzo9I	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
LguI	GCTCTTC	1 cut(s)	993
LmnI	GCTCC	5 cut(s)	54, 137, 1491, 1553, 2374
Lsp1109I	GCAGC	8 cut(s)	209, 225, 265, 274, 365, 419, 466, 1897
LweI	GCATC	6 cut(s)	290, 504, 559, 567, 1857, 2260
MaeI	CTAG	8 cut(s)	359, 581, 669, 683, 909, 2003, 2060, 2279
MaeII	ACGT	2 cut(s)	315, 609
MaeIII	GTNAC	5 cut(s)	557, 754, 1807, 2088, 2120
MalI	GATC	6 cut(s)	83, 267, 309, 474, 1002, 1154
MboI	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
MboII	GAAGA	9 cut(s)	645, 698, 810, 968, 971, 980, 1414, 2108, 2260
MfeI	CAATTG	1 cut(s)	2031
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	4 cut(s)	1306, 1488, 1550, 2371
MlsI	TGGCCA	1 cut(s)	448
MluNI	TGGCCA	1 cut(s)	448
MlyI	GAGTC	4 cut(s)	220, 797, 839, 959
MmeI	TCCRAC	3 cut(s)	115, 728, 1747
Mox20I	TGGCCA	1 cut(s)	448
Mph1103I	ATGCAT	2 cut(s)	497, 2275
MroXI	GAANNNNTTC	1 cut(s)	1527
MscI	TGGCCA	1 cut(s)	448
MslI	CAYNNNNRTG	3 cut(s)	77, 1754, 2268
Msp20I	TGGCCA	1 cut(s)	448
MspA1I	CMGCKG	1 cut(s)	200
MspI	CCGG	2 cut(s)	1284, 2038
MspR9I	CCNGG	6 cut(s)	548, 975, 1284, 1359, 2038, 2039
MunI	CAATTG	1 cut(s)	2031
Mva1269I	GAATGC	1 cut(s)	1431
MvaI	CCWGG	3 cut(s)	548, 975, 1359
MwoI	GCNNNNNNNGC	8 cut(s)	61, 213, 284, 287, 362, 992, 1483, 1499
NciI	CCSGG	3 cut(s)	1284, 2038, 2039
NdeI	CATATG	2 cut(s)	1480, 1930
NdeII	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
NheI	GCTAGC	1 cut(s)	580
NlaIII	CATG	9 cut(s)	82, 337, 443, 863, 1493, 1546, 1556, 1591, 1948
NlaIV	GGNNCC	3 cut(s)	50, 377, 1356
NmuCI	GTSAC	3 cut(s)	754, 2088, 2120
NsiI	ATGCAT	2 cut(s)	497, 2275
NspI	RCATGY	1 cut(s)	1591
PaeR7I	CTCGAG	1 cut(s)	1638
PagI	TCATGA	1 cut(s)	1944
PciSI	GCTCTTC	1 cut(s)	993
PctI	GAATGC	1 cut(s)	1431
PdmI	GAANNNNTTC	1 cut(s)	1527
PfeI	GAWTC	4 cut(s)	882, 1560, 1796, 2331
PflMI	CCANNNNNTGG	1 cut(s)	1211
PkrI	GCNGC	8 cut(s)	199, 215, 280, 289, 355, 409, 481, 1912
Ple19I	CGATCG	1 cut(s)	475
PleI	GAGTC	4 cut(s)	220, 797, 839, 959
PpsI	GAGTC	4 cut(s)	220, 797, 839, 959
PpuMI	RGGWCCY	1 cut(s)	1566
PshBI	ATTAAT	1 cut(s)	1673
PsiI	TTATAA	2 cut(s)	1010, 1605
Psp124BI	GAGCTC	2 cut(s)	1488, 2371
Psp5II	RGGWCCY	1 cut(s)	1566
Psp6I	CCWGG	3 cut(s)	546, 973, 1357
PspFI	CCCAGC	4 cut(s)	572, 748, 1314, 1982
PspGI	CCWGG	3 cut(s)	546, 973, 1357
PspN4I	GGNNCC	3 cut(s)	50, 377, 1356
PspPI	GGNCC	3 cut(s)	1281, 1566, 2182
PspPPI	RGGWCCY	1 cut(s)	1566
PspXI	VCTCGAGB	1 cut(s)	1638
PsrI	GAACNNNNNNTAC	2 cut(s)	1512, 1544
PsuI	RGATCY	1 cut(s)	265
PvuI	CGATCG	1 cut(s)	475
RsaI	GTAC	9 cut(s)	16, 518, 874, 1048, 1077, 1112, 1136, 1270, 1877
RsaNI	GTAC	9 cut(s)	15, 517, 873, 1047, 1076, 1111, 1135, 1269, 1876
RseI	CAYNNNNRTG	3 cut(s)	77, 1754, 2268
SacI	GAGCTC	2 cut(s)	1488, 2371
SapI	GCTCTTC	1 cut(s)	993
SatI	GCNGC	8 cut(s)	198, 214, 279, 288, 354, 408, 480, 1911
Sau3AI	GATC	6 cut(s)	81, 265, 307, 472, 1000, 1152
Sau96I	GGNCC	3 cut(s)	1281, 1566, 2182
ScaI	AGTACT	1 cut(s)	1048
SchI	GAGTC	4 cut(s)	220, 797, 839, 959
ScrFI	CCNGG	6 cut(s)	548, 975, 1284, 1359, 2038, 2039
SduI	GDGCHC	4 cut(s)	1306, 1488, 1550, 2371
SfaNI	GCATC	6 cut(s)	290, 504, 559, 567, 1857, 2260
SfcI	CTRYAG	1 cut(s)	1987
Sfr274I	CTCGAG	1 cut(s)	1638
SinI	GGWCC	1 cut(s)	1566
SlaI	CTCGAG	1 cut(s)	1638
SmaI	CCCGGG	1 cut(s)	2039
SmiMI	CAYNNNNRTG	3 cut(s)	77, 1754, 2268
SmlI	CTYRAG	6 cut(s)	384, 849, 1342, 1638, 1684, 2161
SmoI	CTYRAG	6 cut(s)	384, 849, 1342, 1638, 1684, 2161
SpeI	ACTAGT	1 cut(s)	908
SsiI	CCGC	3 cut(s)	200, 1556, 1695
SspI	AATATT	2 cut(s)	1146, 1162
SspMI	CTAG	8 cut(s)	359, 581, 669, 683, 909, 2003, 2060, 2279
SstI	GAGCTC	2 cut(s)	1488, 2371
StyD4I	CCNGG	6 cut(s)	546, 973, 1282, 1357, 2036, 2037
StyI	CCWWGG	2 cut(s)	2049, 2278
TaaI	ACNGT	9 cut(s)	557, 563, 823, 1046, 1075, 1273, 1424, 2126, 2317
TaiI	ACGT	2 cut(s)	318, 612
TaqI	TCGA	6 cut(s)	250, 843, 991, 1392, 1639, 1752
TatI	WGTACW	6 cut(s)	516, 1046, 1075, 1110, 1134, 1875
TfiI	GAWTC	4 cut(s)	882, 1560, 1796, 2331
TscAI	CASTG	5 cut(s)	399, 828, 1333, 1381, 1870
TseFI	GTSAC	3 cut(s)	754, 2088, 2120
TseI	GCWGC	8 cut(s)	197, 213, 278, 287, 353, 407, 479, 1910
Tsp45I	GTSAC	3 cut(s)	754, 2088, 2120
TspMI	CCCGGG	1 cut(s)	2037
TspRI	CASTG	5 cut(s)	399, 828, 1333, 1381, 1870
Van91I	CCANNNNNTGG	1 cut(s)	1211
VpaK11BI	GGWCC	1 cut(s)	1566
VspI	ATTAAT	1 cut(s)	1673
XapI	RAATTY	4 cut(s)	978, 1437, 1868, 2173
XbaI	TCTAGA	1 cut(s)	2059
XceI	RCATGY	1 cut(s)	1591
XhoI	CTCGAG	1 cut(s)	1638
XmaI	CCCGGG	1 cut(s)	2037
XmaJI	CCTAGG	1 cut(s)	2278
XmnI	GAANNNNTTC	1 cut(s)	1527
XspI	CTAG	8 cut(s)	359, 581, 669, 683, 909, 2003, 2060, 2279
ZrmI	AGTACT	1 cut(s)	1048
Zsp2I	ATGCAT	2 cut(s)	497, 2275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.