Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

2692384 .. 2696212

Gene Structure 3829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G056200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGTCATATATAAACAAGCTATGTGGGAAAGGTTCTGCCATCTACTTTACACAATCAAAGTTTCAAAACCCGATGTCTTTTCCTTTCACCACAGCTAATACAGTCCATAGACTTTGGATCTTGTTTCCTGTGCTCATTATTCTCTCCTATGGTTATGGACTTGGAGCGCTAAATAGCAGCGATGTCACCAACGTTGGCGCAATCATTAATTTCAACTCCCGTATTGGGAAAGAACAGAAAGCTGCCATGGAAGTTGCAGCTGAGGACTTCAACAACCGTTCAAAGACTCATAAGCTAATCCTTCATTTTCGAGACTCCGGCAGAGATCCCTTTCGTGCTGCTTCTGCTGCTGAAGAGCTGATAAAGGAAAAGAAAGTAGAAGCGATAGTTGGCATGGAGACTTGGCAAGAAGCAGCTCAAGTAGCTGATCATGCAGGAAACCAATCTAAAGTTCCAGTGATTTCATTTGCAGCACCAACTATAACCCCGCCCCTAATGCAACGCCGCTGGCCTCATTTGATACGAATGGCAACAGATGCTTCTGCTCAAATGAAATGCATTGCTGATTTAGTTTCTGCCTACCATTGGAAAAGGGTTGTTGTAATATACGAAGACGATGGCTATGGTGGTGCTGTAGGGACGCTAGCTGTTTTATCTGAGGCTCTTCGAGACGTTGGTTCAAAGATTGAGCACCGTTTGATTCTCCCACGAGTTTCTTCTCTGTCTAACCCAAATTGGGTTGAGCTAGAAGAGCTATTGAAGCTTCCCTTCATACAGTCTCGGGTATTTATTGTTCTTCAGTCATCTTTATCTACAGTTACTCATCTGTTCAGGGTGGCTAAGAAGATGGAACTTGTAGGAAGAGACTCAGCTTGGATAATCACAGAGAGTATTGTTAGTTTGCTTGACTCTCTTGACAGCTCTGATATGTCCACTATGGAAGGCACTTTAGGAACCAAGACCTATTATGCCAAAAATACTAATTCTTATGCCAAGTTCCAGAATGAATTCCAAACAAAATTTTCAGAAGAAGATAACTCCAAGCCAGGAATTTATGCTCTTCGAGCATTCGATACGATGACAATCATTACACAGGCCCTAAGAAGAATGACTAGTAACAGTTCTACTAGTAACCTTCAGGAGCTGTTTAACACATTGTTCAACAACTACACCGGTCTAAGTGGGAAAATGTACTTTAAAGAAGGTGGGGTGCTGTTGTATTCTCCTAAGTTCAGGATCATAAATATTGTGGATGGGAAGACAGACAAAGAATTAATCTCTTGGACACCAGAGGTTGGGTTCTCACCAAGCCTTGTTAACCAAGGCACAAACAGCAGTAATGGTGTTGGCATAATTTGGCCCGGGAATGTAACAAGTGCTCCCAAGGGCTGGGCTATGCCTACTGATGAGAAGAAAATGAGAATTCTGGTTCCAGGTATAACTTCCTTCTACAAATTTGTGAAGGTTGATTGGTCCAGGCAGGACTCAGATGAGAAGAAATTTGATGGTTTCTGCATTGCGCTTTTCAAAATGATAGTTAGTAATTTGAGTTATTCTCTGCCATATGAAATTGAAGCAAGAAATGGCTCCTATGATAGTCTGATAAATCTGGTCCAAGATAAGACTTATGATGCTGTGGTTGGTGATATAACCGTACTATCGGAACGACTGGAGAAAGTGGATTTCACTCAGCCATATCTGGAGTCTGGTTTGTCAATGATTGTTCCAGAAAACTATGAGGAGTCAACATGGTTATTTCTGAAGCCTTTTACTTGGCAAATGTGGGTGGTGACCGGTGGCATTTTGATCTACACAACGTTGATAGTGTGGTTCCTGGAGCGCCCATCCAATCCAGAATTTGGTGGCCGTTTTAAGGATCAAATTCGCACAGCAACTTGGTTCACCTTCTCGTCTTTGTTCTTTGCTCACAGAGAGAAAATCTACAGCAACTTGACTAGAGTAGTTGTTATAGAGTGGCTGTTTGTTGTATTGATCCTAAGCTCAAGCTACACTGCTAATCTGTCCTCAATGCTTACCATCAAAGGACTGAACCCGAATGTAACAGGCATTGAAACGCTGAAGAGAACCAACGCAAAAATTGGTTCTGATGCAGATTCTTTTATCCTGAACTACCTGGAGGTTGTTCTTGGATTCAAAAATAGCAACATCATCGAAGTAGGCCCCCAATACAATGTGGACGACTTCAAGAGCAAACGTATATCTGCTGCCTTTCTTGAACTCCCATATGCAGAAGTGTTCATCAACCAGAACTGCAAGGGGTATACTTCCACTGCACCAAACTACAGATTTGGAGGATTCAGCTTTGCATTCCAGCAAGGCTCTCCAATAGCCAGGGATTTCACTAAGGCCATTCTAGAGCTATTGGAGAATGGAGAACTGAAGAAACTTCAAACACGTTGGCTGACCACACCCGAGGGGGAGTGTTCAAACAATGCAACTTCAAACACACCAGAAAGCTTGAGCCTCAAGAATTTCTCCGGCCTCTTTATAATAACCAGCGTTACTTCCACCCTTTGTTTGCTCCTATCTCTTGTTATCTTGATGAGGAAGCGTCAGCAGCAAGAAGCAGACCAAGGCAATGCAAGTCCAAGTCCAAGTGATGGAAGTCTTTGGAACAGAACTGTTAGAATAGCAGGATTTATTAATCAAAGTCTTAGCATTCCAAAGGGAGCTCCATCTTTTGCTAATGTAGAGGAATGGAGTTCTCCATTAAGGTGGGATTATACCTCCACTTCCAACACTCCTGAGCATCCACAGGCCTTTATGGAGCCAGCACAAATTGAATTCATTCCACAGGAATCTATAGAACAAAGGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

947

Amino Acids

106.18

Weight (kDa)

6.62

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2510
AccB7I	CCANNNNNTGG	4 cut(s)	1295, 1389, 1859, 2621
AccI	GTMKAC	1 cut(s)	2282
AciI	CCGC	2 cut(s)	488, 505
AclI	AACGTT	2 cut(s)	192, 1817
AclWI	GGATC	5 cut(s)	125, 320, 1244, 1884, 1987
AcoI	YGGCCR	1 cut(s)	1864
AcuI	CTGAAG	6 cut(s)	372, 782, 1121, 1781, 2099, 2420
AfaI	GTAC	2 cut(s)	1193, 1656
AfeI	AGCGCT	1 cut(s)	168
AfiI	CCNNNNNNNGG	8 cut(s)	225, 585, 736, 1295, 1389, 1859, 1873, 2621
AflIII	ACRYGT	1 cut(s)	2414
AgeI	ACCGGT	2 cut(s)	1172, 1793
AhlI	ACTAGT	2 cut(s)	1112, 1127
AjnI	CCWGG	6 cut(s)	1045, 1432, 1475, 1833, 2133, 2351
AjuI	GAANNNNNNNTTGG	4 cut(s)	372, 404, 435, 467
Alw21I	GWGCWC	4 cut(s)	135, 693, 1381, 2695
Alw26I	GTCTC	5 cut(s)	306, 392, 663, 783, 858
AlwI	GGATC	5 cut(s)	125, 320, 1244, 1884, 1987
AlwNI	CAGNNNCTG	1 cut(s)	1144
Ama87I	CYCGRG	3 cut(s)	780, 1361, 2432
Aor51HI	AGCGCT	1 cut(s)	168
AoxI	GGCC	8 cut(s)	509, 1095, 1358, 1864, 2179, 2367, 2500, 2778
ApeKI	GCWGC	9 cut(s)	177, 242, 257, 338, 347, 413, 470, 2225, 2578
AseI	ATTAAT	3 cut(s)	207, 1274, 2664
AsiGI	ACCGGT	2 cut(s)	1172, 1793
Asp700I	GAANNNNTTC	2 cut(s)	1007, 2808
AspLEI	GCGC	4 cut(s)	169, 200, 1522, 1842
AspS9I	GGNCC	5 cut(s)	1096, 1359, 1473, 1612, 2180
AsuC2I	CCSGG	2 cut(s)	1362, 1363
AsuHPI	GGTGA	6 cut(s)	79, 178, 1296, 1655, 1801, 1894
AsuNHI	GCTAGC	1 cut(s)	643
AvaI	CYCGRG	3 cut(s)	780, 1361, 2432
AvaII	GGWCC	2 cut(s)	1473, 1612
BanII	GRGCYC	1 cut(s)	2695
BauI	CACGAG	1 cut(s)	708
BbsI	GAAGAC	2 cut(s)	618, 1265
Bbv12I	GWGCWC	4 cut(s)	135, 693, 1381, 2695
BbvCI	CCTCAGC	1 cut(s)	261
BbvI	GCAGC	9 cut(s)	189, 229, 269, 325, 334, 425, 482, 2212, 2590
BccI	CCATC	9 cut(s)	47, 611, 841, 1247, 1499, 1852, 2045, 2615, 2704
BceAI	ACGGC	1 cut(s)	1851
BcgI	CGANNNNNNTGC	2 cut(s)	2152, 2186
BciT130I	CCWGG	6 cut(s)	1047, 1434, 1477, 1835, 2135, 2353
BclI	TGATCA	1 cut(s)	427
BcnI	CCSGG	2 cut(s)	1362, 1363
BcoDI	GTCTC	5 cut(s)	306, 392, 663, 783, 858
BcuI	ACTAGT	2 cut(s)	1112, 1127
BfaI	CTAG	6 cut(s)	644, 746, 1113, 1128, 1956, 2375
BfmI	CTRYAG	5 cut(s)	633, 813, 1942, 2302, 2823
BfoI	RGCGCY	2 cut(s)	170, 1843
Bme1390I	CCNGG	8 cut(s)	1047, 1362, 1363, 1434, 1477, 1835, 2135, 2353
Bme18I	GGWCC	2 cut(s)	1473, 1612
BmeT110I	CYCGRG	3 cut(s)	780, 1361, 2432
BmgT120I	GGNCC	5 cut(s)	1096, 1359, 1473, 1612, 2180
BmiI	GGNNCC	6 cut(s)	955, 1431, 1588, 1832, 2182, 2790
BmrFI	CCNGG	8 cut(s)	1047, 1362, 1363, 1434, 1477, 1835, 2135, 2353
BmsI	GCATC	4 cut(s)	526, 1621, 2098, 2779
BmtI	GCTAGC	1 cut(s)	647
BpiI	GAAGAC	2 cut(s)	618, 1265
BplI	GAGNNNNNCTC	2 cut(s)	1540, 1572
BpmI	CTGGAG	4 cut(s)	1691, 1721, 1856, 2156
Bpu10I	CCTNAGC	3 cut(s)	261, 1997, 2766
BpuEI	CTTGAG	4 cut(s)	402, 1987, 2471, 2500
BpuMI	CCSGG	2 cut(s)	1362, 1363
BsaBI	GATNNNNATC	1 cut(s)	1082
BsaJI	CCNNGG	7 cut(s)	246, 1321, 1361, 1383, 2352, 2433, 2593
BsaWI	WCCGGW	2 cut(s)	1172, 1793
BsaXI	ACNNNNNCTCC	2 cut(s)	1363, 1393
Bsc4I	CCNNNNNNNGG	8 cut(s)	225, 585, 736, 1295, 1389, 1859, 1873, 2621
Bse118I	RCCGGY	2 cut(s)	1172, 1793
Bse1I	ACTGG	2 cut(s)	455, 1674
Bse3DI	GCAATG	3 cut(s)	558, 1515, 2605
Bse8I	GATNNNNATC	1 cut(s)	1082
BseBI	CCWGG	6 cut(s)	1047, 1434, 1477, 1835, 2135, 2353
BseDI	CCNNGG	7 cut(s)	246, 1321, 1361, 1383, 2352, 2433, 2593
BseGI	GGATG	3 cut(s)	1258, 1844, 2770
BseJI	GATNNNNATC	1 cut(s)	1082
BseLI	CCNNNNNNNGG	8 cut(s)	225, 585, 736, 1295, 1389, 1859, 1873, 2621
BseMI	GCAATG	3 cut(s)	558, 1515, 2605
BseMII	CTCAG	6 cut(s)	252, 648, 882, 1500, 1703, 2757
BseNI	ACTGG	2 cut(s)	455, 1674
BseRI	GAGGAG	1 cut(s)	1754
BseXI	GCAGC	9 cut(s)	189, 229, 269, 325, 334, 425, 482, 2212, 2590
BseYI	CCCAGC	1 cut(s)	1389
BsgI	GTGCAG	1 cut(s)	2277
BshFI	GGCC	8 cut(s)	511, 1097, 1360, 1866, 2181, 2369, 2502, 2780
BshTI	ACCGGT	2 cut(s)	1172, 1793
BsiHKAI	GWGCWC	4 cut(s)	135, 693, 1381, 2695
BsiHKCI	CYCGRG	3 cut(s)	780, 1361, 2432
BsiSI	CCGG	5 cut(s)	318, 1173, 1362, 1794, 2499
BslFI	GGGAC	1 cut(s)	652
BslI	CCNNNNNNNGG	8 cut(s)	225, 585, 736, 1295, 1389, 1859, 1873, 2621
BsmAI	GTCTC	5 cut(s)	306, 392, 663, 783, 858
BsmBI	CGTCTC	1 cut(s)	663
BsmFI	GGGAC	1 cut(s)	652
BsmI	GAATGC	3 cut(s)	1067, 2327, 2679
BsnI	GGCC	8 cut(s)	511, 1097, 1360, 1866, 2181, 2369, 2502, 2780
BsoBI	CYCGRG	3 cut(s)	780, 1361, 2432
Bsp1286I	GDGCHC	4 cut(s)	135, 693, 1381, 2695
Bsp143I	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
Bsp19I	CCATGG	1 cut(s)	246
BspACI	CCGC	2 cut(s)	488, 505
BspANI	GGCC	8 cut(s)	511, 1097, 1360, 1866, 2181, 2369, 2502, 2780
BspCNI	CTCAG	6 cut(s)	253, 649, 881, 1499, 1702, 2758
BspLI	GGNNCC	6 cut(s)	955, 1431, 1588, 1832, 2182, 2790
BspOI	GCTAGC	1 cut(s)	647
BspPI	GGATC	5 cut(s)	125, 320, 1244, 1884, 1987
BspQI	GCTCTTC	4 cut(s)	348, 669, 744, 1065
BsrDI	GCAATG	3 cut(s)	558, 1515, 2605
BsrFI	RCCGGY	2 cut(s)	1172, 1793
BsrI	ACTGG	2 cut(s)	455, 1674
BssAI	RCCGGY	2 cut(s)	1172, 1793
BssECI	CCNNGG	7 cut(s)	246, 1321, 1361, 1383, 2352, 2433, 2593
BssMI	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
BssNAI	GTATAC	1 cut(s)	2283
BssSI	CACGAG	1 cut(s)	708
BssT1I	CCWWGG	4 cut(s)	246, 1321, 1383, 2593
Bst1107I	GTATAC	1 cut(s)	2283
Bst2BI	CACGAG	1 cut(s)	708
Bst2UI	CCWGG	6 cut(s)	1047, 1434, 1477, 1835, 2135, 2353
Bst4CI	ACNGT	8 cut(s)	103, 278, 695, 777, 817, 1121, 1654, 2644
Bst6I	CTCTTC	6 cut(s)	348, 669, 744, 856, 1065, 2075
BstAPI	GCANNNNNTGC	1 cut(s)	536
BstC8I	GCNNGC	3 cut(s)	509, 645, 2793
BstDSI	CCRYGG	1 cut(s)	246
BstEII	GGTNACC	1 cut(s)	1789
BstF5I	GGATG	3 cut(s)	1258, 1844, 2770
BstH2I	RGCGCY	2 cut(s)	170, 1843
BstHHI	GCGC	4 cut(s)	169, 200, 1522, 1842
BstKTI	GATC	7 cut(s)	120, 328, 430, 1239, 1809, 1879, 1995
BstMAI	GTCTC	5 cut(s)	306, 392, 663, 783, 858
BstMBI	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
BstNI	CCWGG	6 cut(s)	1047, 1434, 1477, 1835, 2135, 2353
BstPI	GGTNACC	1 cut(s)	1789
BstSCI	CCNGG	8 cut(s)	1045, 1360, 1361, 1432, 1475, 1833, 2133, 2351
BstSFI	CTRYAG	5 cut(s)	633, 813, 1942, 2302, 2823
BstV1I	GCAGC	9 cut(s)	189, 229, 269, 325, 334, 425, 482, 2212, 2590
BstV2I	GAAGAC	2 cut(s)	618, 1265
BstX2I	RGATCY	2 cut(s)	117, 325
BstXI	CCANNNNNNTGG	1 cut(s)	2736
BstYI	RGATCY	2 cut(s)	117, 325
BstZ17I	GTATAC	1 cut(s)	2283
BsuRI	GGCC	8 cut(s)	511, 1097, 1360, 1866, 2181, 2369, 2502, 2780
BtgI	CCRYGG	1 cut(s)	246
BtgZI	GCGATG	1 cut(s)	195
BtsCI	GGATG	3 cut(s)	1258, 1844, 2770
BtsI	GCAGTG	2 cut(s)	2010, 2289
BtsIMutI	CAGTG	3 cut(s)	462, 2010, 2289
Cac8I	GCNNGC	3 cut(s)	509, 645, 2793
CaiI	CAGNNNCTG	1 cut(s)	1144
CfoI	GCGC	4 cut(s)	169, 200, 1522, 1842
Cfr10I	RCCGGY	2 cut(s)	1172, 1793
Cfr13I	GGNCC	5 cut(s)	1096, 1359, 1473, 1612, 2180
Cfr9I	CCCGGG	1 cut(s)	1361
CseI	GACGC	2 cut(s)	649, 2561
Csp6I	GTAC	2 cut(s)	1192, 1655
CspAI	ACCGGT	2 cut(s)	1172, 1793
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviAII	CATG	4 cut(s)	247, 394, 431, 1749
CviQI	GTAC	2 cut(s)	1192, 1655
DpnI	GATC	7 cut(s)	119, 327, 429, 1238, 1808, 1878, 1994
DpnII	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
DraI	TTTAAA	1 cut(s)	1198
EaeI	YGGCCR	1 cut(s)	1864
Eam1104I	CTCTTC	6 cut(s)	348, 669, 744, 856, 1065, 2075
EarI	CTCTTC	6 cut(s)	348, 669, 744, 856, 1065, 2075
Ecl136II	GAGCTC	1 cut(s)	2693
Eco130I	CCWWGG	4 cut(s)	246, 1321, 1383, 2593
Eco147I	AGGCCT	1 cut(s)	2780
Eco24I	GRGCYC	1 cut(s)	2695
Eco47I	GGWCC	2 cut(s)	1473, 1612
Eco47III	AGCGCT	1 cut(s)	168
Eco53kI	GAGCTC	1 cut(s)	2693
Eco57I	CTGAAG	6 cut(s)	372, 782, 1121, 1781, 2099, 2420
Eco88I	CYCGRG	3 cut(s)	780, 1361, 2432
Eco91I	GGTNACC	1 cut(s)	1789
EcoICRI	GAGCTC	1 cut(s)	2693
EcoO109I	RGGNCCY	2 cut(s)	1096, 2180
EcoO65I	GGTNACC	1 cut(s)	1789
EcoRI	GAATTC	3 cut(s)	1007, 1422, 2804
EcoRII	CCWGG	6 cut(s)	1045, 1432, 1475, 1833, 2133, 2351
EcoT14I	CCWWGG	4 cut(s)	246, 1321, 1383, 2593
EcoT22I	ATGCAT	1 cut(s)	560
EcoT38I	GRGCYC	1 cut(s)	2695
ErhI	CCWWGG	4 cut(s)	246, 1321, 1383, 2593
Esp3I	CGTCTC	1 cut(s)	663
FaeI	CATG	4 cut(s)	250, 397, 434, 1752
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FaqI	GGGAC	1 cut(s)	652
FatI	CATG	4 cut(s)	246, 393, 430, 1748
FauI	CCCGC	1 cut(s)	495
FauNDI	CATATG	2 cut(s)	1564, 2245
FbaI	TGATCA	1 cut(s)	427
FblI	GTMKAC	1 cut(s)	2282
FokI	GGATG	3 cut(s)	1265, 1831, 2757
FriOI	GRGCYC	1 cut(s)	2695
FspBI	CTAG	6 cut(s)	644, 746, 1113, 1128, 1956, 2375
GlaI	GCGC	4 cut(s)	168, 199, 1521, 1841
GsaI	CCCAGC	1 cut(s)	1393
GsuI	CTGGAG	4 cut(s)	1691, 1721, 1856, 2156
HaeII	RGCGCY	2 cut(s)	170, 1843
HaeIII	GGCC	8 cut(s)	511, 1097, 1360, 1866, 2181, 2369, 2502, 2780
HapII	CCGG	5 cut(s)	318, 1173, 1362, 1794, 2499
HgaI	GACGC	2 cut(s)	649, 2561
HhaI	GCGC	4 cut(s)	169, 200, 1522, 1842
Hin1II	CATG	4 cut(s)	250, 397, 434, 1752
Hin6I	GCGC	4 cut(s)	167, 198, 1520, 1840
HinP1I	GCGC	4 cut(s)	167, 198, 1520, 1840
HincII	GTYRAC	2 cut(s)	1318, 1746
HindII	GTYRAC	2 cut(s)	1318, 1746
HindIII	AAGCTT	2 cut(s)	761, 2476
HpaI	GTTAAC	1 cut(s)	1318
HpaII	CCGG	5 cut(s)	318, 1173, 1362, 1794, 2499
HphI	GGTGA	6 cut(s)	79, 178, 1296, 1655, 1801, 1894
Hpy166II	GTNNAC	6 cut(s)	933, 1318, 1746, 1902, 2197, 2283
Hpy188I	TCNGA	8 cut(s)	658, 925, 1027, 1489, 1602, 1663, 1761, 2107
Hpy8I	GTNNAC	6 cut(s)	933, 1318, 1746, 1902, 2197, 2283
HpyAV	CCTTC	8 cut(s)	311, 778, 935, 1145, 1196, 1456, 1456, 1915
HpyCH4III	ACNGT	8 cut(s)	103, 278, 695, 777, 817, 1121, 1654, 2644
HpyCH4IV	ACGT	5 cut(s)	192, 672, 1817, 2215, 2416
HpySE526I	ACGT	5 cut(s)	192, 672, 1817, 2215, 2416
Hsp92II	CATG	4 cut(s)	250, 397, 434, 1752
HspAI	GCGC	4 cut(s)	167, 198, 1520, 1840
Ksp22I	TGATCA	1 cut(s)	427
KspAI	GTTAAC	1 cut(s)	1318
Kzo9I	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
LguI	GCTCTTC	4 cut(s)	348, 669, 744, 1065
LmnI	GCTCC	9 cut(s)	164, 1141, 1384, 1592, 1837, 2547, 2690, 2698, 2788
Lsp1109I	GCAGC	9 cut(s)	189, 229, 269, 325, 334, 425, 482, 2212, 2590
LweI	GCATC	4 cut(s)	526, 1621, 2098, 2779
MaeI	CTAG	6 cut(s)	644, 746, 1113, 1128, 1956, 2375
MaeII	ACGT	5 cut(s)	192, 672, 1817, 2215, 2416
MaeIII	GTNAC	8 cut(s)	184, 817, 1115, 1130, 1369, 1789, 2059, 2521
MalI	GATC	7 cut(s)	119, 327, 429, 1238, 1808, 1878, 1994
MboI	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
MflI	RGATCY	2 cut(s)	117, 325
MhlI	GDGCHC	4 cut(s)	135, 693, 1381, 2695
MlyI	GAGTC	7 cut(s)	280, 308, 860, 902, 1478, 1712, 1751
MmeI	TCCRAC	1 cut(s)	2781
Mph1103I	ATGCAT	1 cut(s)	560
MroXI	GAANNNNTTC	2 cut(s)	1007, 2808
MseI	TTAA	8 cut(s)	207, 1149, 1197, 1274, 1317, 1872, 2664, 2732
MslI	CAYNNNNRTG	1 cut(s)	2734
MspA1I	CMGCKG	2 cut(s)	260, 507
MspI	CCGG	5 cut(s)	318, 1173, 1362, 1794, 2499
MspR9I	CCNGG	8 cut(s)	1047, 1362, 1363, 1434, 1477, 1835, 2135, 2353
Mva1269I	GAATGC	3 cut(s)	1067, 2327, 2679
MvaI	CCWGG	6 cut(s)	1047, 1434, 1477, 1835, 2135, 2353
NciI	CCSGG	2 cut(s)	1362, 1363
NcoI	CCATGG	1 cut(s)	246
NdeI	CATATG	2 cut(s)	1564, 2245
NdeII	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
NheI	GCTAGC	1 cut(s)	643
NlaIII	CATG	4 cut(s)	250, 397, 434, 1752
NlaIV	GGNNCC	6 cut(s)	955, 1431, 1588, 1832, 2182, 2790
NmuCI	GTSAC	2 cut(s)	184, 1789
NsiI	ATGCAT	1 cut(s)	560
PceI	AGGCCT	1 cut(s)	2780
PciSI	GCTCTTC	4 cut(s)	348, 669, 744, 1065
PctI	GAATGC	3 cut(s)	1067, 2327, 2679
PdmI	GAANNNNTTC	2 cut(s)	1007, 2808
PfeI	GAWTC	5 cut(s)	700, 2114, 2151, 2316, 2819
PflMI	CCANNNNNTGG	4 cut(s)	1295, 1389, 1859, 2621
PfoI	TCCNGGA	1 cut(s)	1833
PinAI	ACCGGT	2 cut(s)	1172, 1793
PleI	GAGTC	7 cut(s)	280, 308, 860, 902, 1478, 1711, 1750
PpsI	GAGTC	7 cut(s)	280, 308, 860, 902, 1478, 1711, 1750
PshBI	ATTAAT	3 cut(s)	207, 1274, 2664
PsiI	TTATAA	1 cut(s)	2510
Psp124BI	GAGCTC	1 cut(s)	2695
Psp1406I	AACGTT	2 cut(s)	192, 1817
Psp6I	CCWGG	6 cut(s)	1045, 1432, 1475, 1833, 2133, 2351
PspEI	GGTNACC	1 cut(s)	1789
PspFI	CCCAGC	1 cut(s)	1389
PspGI	CCWGG	6 cut(s)	1045, 1432, 1475, 1833, 2133, 2351
PspN4I	GGNNCC	6 cut(s)	955, 1431, 1588, 1832, 2182, 2790
PspPI	GGNCC	5 cut(s)	1096, 1359, 1473, 1612, 2180
PsrI	GAACNNNNNNTAC	2 cut(s)	777, 809
PstNI	CAGNNNCTG	1 cut(s)	1144
PsuI	RGATCY	2 cut(s)	117, 325
PvuII	CAGCTG	1 cut(s)	260
RsaI	GTAC	2 cut(s)	1193, 1656
RsaNI	GTAC	2 cut(s)	1192, 1655
RseI	CAYNNNNRTG	1 cut(s)	2734
SacI	GAGCTC	1 cut(s)	2695
SapI	GCTCTTC	4 cut(s)	348, 669, 744, 1065
SaqAI	TTAA	8 cut(s)	207, 1149, 1197, 1274, 1317, 1872, 2664, 2732
Sau3AI	GATC	7 cut(s)	117, 325, 427, 1236, 1806, 1876, 1992
Sau96I	GGNCC	5 cut(s)	1096, 1359, 1473, 1612, 2180
SchI	GAGTC	7 cut(s)	280, 308, 860, 902, 1478, 1712, 1751
ScrFI	CCNGG	8 cut(s)	1047, 1362, 1363, 1434, 1477, 1835, 2135, 2353
SduI	GDGCHC	4 cut(s)	135, 693, 1381, 2695
SfaNI	GCATC	4 cut(s)	526, 1621, 2098, 2779
SfcI	CTRYAG	5 cut(s)	633, 813, 1942, 2302, 2823
SinI	GGWCC	2 cut(s)	1473, 1612
SmaI	CCCGGG	1 cut(s)	1363
SmiMI	CAYNNNNRTG	1 cut(s)	2734
SmlI	CTYRAG	4 cut(s)	417, 2002, 2479, 2486
SmoI	CTYRAG	4 cut(s)	417, 2002, 2479, 2486
SpeI	ACTAGT	2 cut(s)	1112, 1127
SseBI	AGGCCT	1 cut(s)	2780
SsiI	CCGC	2 cut(s)	488, 505
SspI	AATATT	1 cut(s)	1246
SspMI	CTAG	6 cut(s)	644, 746, 1113, 1128, 1956, 2375
SstI	GAGCTC	1 cut(s)	2695
StuI	AGGCCT	1 cut(s)	2780
StyD4I	CCNGG	8 cut(s)	1045, 1360, 1361, 1432, 1475, 1833, 2133, 2351
StyI	CCWWGG	4 cut(s)	246, 1321, 1383, 2593
TaaI	ACNGT	8 cut(s)	103, 278, 695, 777, 817, 1121, 1654, 2644
TaiI	ACGT	5 cut(s)	195, 675, 1820, 2218, 2419
TaqI	TCGA	5 cut(s)	310, 667, 1063, 1071, 2172
TatI	WGTACW	1 cut(s)	1191
TauI	GCSGC	1 cut(s)	507
TfiI	GAWTC	5 cut(s)	700, 2114, 2151, 2316, 2819
Tru1I	TTAA	8 cut(s)	207, 1149, 1197, 1274, 1317, 1872, 2664, 2732
Tru9I	TTAA	8 cut(s)	207, 1149, 1197, 1274, 1317, 1872, 2664, 2732
TscAI	CASTG	3 cut(s)	462, 2017, 2296
TseFI	GTSAC	2 cut(s)	184, 1789
TseI	GCWGC	9 cut(s)	177, 242, 257, 338, 347, 413, 470, 2225, 2578
Tsp45I	GTSAC	2 cut(s)	184, 1789
TspDTI	ATGAA	8 cut(s)	293, 453, 566, 760, 1020, 1581, 2248, 2797
TspMI	CCCGGG	1 cut(s)	1361
TspRI	CASTG	3 cut(s)	462, 2017, 2296
Van91I	CCANNNNNTGG	4 cut(s)	1295, 1389, 1859, 2621
VpaK11BI	GGWCC	2 cut(s)	1473, 1612
VspI	ATTAAT	3 cut(s)	207, 1274, 2664
XbaI	TCTAGA	1 cut(s)	2374
XmaI	CCCGGG	1 cut(s)	1361
XmiI	GTMKAC	1 cut(s)	2282
XmnI	GAANNNNTTC	2 cut(s)	1007, 2808
XspI	CTAG	6 cut(s)	644, 746, 1113, 1128, 1956, 2375
Zsp2I	ATGCAT	1 cut(s)	560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.