Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Reverse (-)

6568105 .. 6571316

Gene Structure 3212 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29076

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGTCTTCTCATTCTACAGCTAATAGAGACCAAAGGCGTAGGCTCTTGTTTCCTCTGCTCATCTTCTACTTGCTATTCATTCTCTCCTATGCAGTTGAAGCTGAAGATGAAAAAAATGTCACCAACATCGGAGCAATCATTGATGTTAATTCCCGTATAGGCAAAGAACAGAAAGCTGCTATGGAAATTGCAGCAGAAAACTTCAACAAACAGTCAGACACTCATGAGCTAATCCTTCATTTTAGAGATTCTGGCCGCGACCCTTTTCTTGCTGCTTATGCTGCTAAACATTTGATAAAGGAACAAAAGGTACAAGTGGTAATTGGCATGGAGACTTGGCAGGAGGCTATTACAGTAGCTGATGTAGTCCATAACCAGCCTGAAAAAATTCCTGTCATTTCCTTTGCAGCACCAACCATAACCCCACCGCTAATAGAACGCCGTTGGCCTTTCTTGATAAGAATGGCAAGCGATAATGCTGCTCAGATGAAATGCATTGGAGATATAGTTAATGCATACAACTGGAAAAGGGTTGTTGTAATATATGAAGATAATGGTTATGGTGGTGGTGTGGGGAGGCTAGCACTTTTATCTGAGACTCTAAGAAATGTTGGTTCTAAGATTGAGCTTCGTATAGTTCTCCCACAACTTTCTGAGTCTGATACAAATTGGGATGAACTAAAGAAGCAGCTGTCGGAGATTGCCAATGTAAATTCTAGGGCATTTATAGTTCTTCAGTCATCTTTACCAACAGTAACTGCTCTGTTCAAAGTGGCTAGGAAGATGGGATTTGTAGGAGCAGATTCAGCTTGGATAATCACAGAGAGTATTGCTAGTTTGCTTGACCCTCAGGGCAATTATGATATGGATGGTACACTGGGAATGAAGACTTACTATGAAAGGGATACTAGTAGTTATGCCAGATTTCAGAAAGAATTCCAAACAAAGTATTCAGAAGAAGATTACTCTAAGCCAGGAATTTATGCTCTTCGAGCATACGATATTATTTCAATCATCACGCAGGCCATAAGTAGAATGCCTAATACTACTCTTCAAGAGTCATTAGCTACAATTTTGAGCAATTACAAGGGTTTAAGTGGGAAAATGCAACTCAAAGGAGGTGAGGTGATGCTAGATTCTGAGGTAATGCTGGACTCTCCGAGATTCAGGATCATAAATATTGTGGATGGGAAGACAGATAAAGAACTAAACTTGTGGACTCCAGAGTTTGGATTTTCAAAAAGCCATGTTAAAGTATCAGGCATATACGGAAGTAATGATGATGTTGGCAATGTAACTTGGCCCGGGAAGCTAAGAGTACCTGACTCCAAAGGCTGGGCAATGCCCACTGATGAGAAGCCAATGAAAATTTTGCTCCCAACTTACCACACAAACTTTGTAAGGCGTATCTCCGGGGAGAACTCAAATGAGATGGGAAAAACGGGTTTATGCCCAGGAAAGAAGCCCCGAGAGAACTCAAATGAGATGGGAACAGAGGATCCATGCTCATATCTTCCTTTCTATGATGGTTTGAGTATTGATCTTTTCTGCTGCGTGCTAGAAAATTTGGGTTATCGCTTGCCACATGAAGTACATGAATTTAACCACAACAATGGCACTTACAATGATACGGTAGAACTAGTCTATAACAAGACTTACGATGCTGTGATTGGCGATACAACTGTACTTGAGCCGCGAATTGACAAAGTGGATTTCACTCAACCATATCTGGAGTCTGGTTTGTCAATGATAGTTCCAGATATACCTAATGAGGAGGAAGCATGGATGTTTTTGAAACCTTTCTCATGGAAAACGTGGGTTGTAACTGGTGGCATCTTAATCTACACGACCTTAGTAGTATGGTTCCTTGAGGTGCCATCAAATCCAGATTTCAGTGGCTCGTTTAAGAATCAGATTGCCTTAGCAACTTGGTTCACCTTCTCATCTTTGTTCTTTGCTCACGGAGAAAAAGTCTACAGCAACTTGACTCGAGTAGTTTTTGTAGTGTGGCTGTTTGTTGTATTGATCTTAAGCTCAAGCTACACTGCTAATCTGTCTTCAATGCTTACAATCCAACGACTGAGCCCGAATGTAACAGATATTGAAATGTTGAGGAGCACCAACTCATTAGTTGGTTGCGATAATTCATTTGTCAGGAATTACCTAGAGAATGTTCTTGGTTTCAATCAAGAGACTGTCAAGGTAATAGATAGCAGCTACGACCTGGAAGAAATCAGAAGTAAAAATTTATCTGCTGTATTTCTTGAATTGCCATATGCGCAAGTATTTATGGACAACCATACGGGCTTTACTCTCACCAAAGCCACCCACAGTTTTGGAGGCTTTAGCTTTGTATTTCAGAAAGGCTCTCCAATAGCTAGGGATTTCTCTAAGGTCATTCTAGATCTACTGGAGAATGGAAAAATGAGAAAACTTCAAGATCACTGGTTGACCCCAAACAAACGTCCAACCAATACAACTTCCGATACAACCAATACAACTTCCGATATGCCAGAAAGCTTGCGCCTCGAGAGCTTTTGGGGTCTCTTTGTAATATCCGGGGCTACTTCCACCTTCTGTTTTCTAATATCTCTTACTATCTGGCTAAAGAAGTTATATCGAGGCATTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

877

Amino Acids

99.05

Weight (kDa)

5.64

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	52 - 363	1.2e-20	Periplasmic binding protein
ANF_receptor	PF01094	58 - 377	4.4e-39	Receptor family ligand binding region
SBP_bac_3	PF00497	508 - 818	2.7e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	602 - 855	2.3e-29	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2280
AccB1I	GGYRCC	1 cut(s)	1873
AccB7I	CCANNNNNTGG	2 cut(s)	1229, 1335
AccI	GTMKAC	1 cut(s)	1974
AccII	CGCG	2 cut(s)	258, 1696
AciI	CCGC	3 cut(s)	256, 428, 1694
AclWI	GGATC	3 cut(s)	1178, 1493, 1506
AcoI	YGGCCR	1 cut(s)	253
AcsI	RAATTY	8 cut(s)	387, 712, 935, 978, 1368, 1564, 1598, 2245
AcuI	CTGAAG	2 cut(s)	123, 719
AfaI	GTAC	5 cut(s)	312, 874, 1320, 1593, 1686
AfiI	CCNNNNNNNGG	2 cut(s)	1229, 1335
AflII	CTTAAG	1 cut(s)	2029
AhlI	ACTAGT	2 cut(s)	908, 1639
AjnI	CCWGG	3 cut(s)	973, 1453, 2223
AloI	GAACNNNNNNTCC	2 cut(s)	1483, 1515
Alw21I	GWGCWC	1 cut(s)	2120
Alw26I	GTCTC	5 cut(s)	21, 326, 590, 2186, 2549
AlwI	GGATC	3 cut(s)	1178, 1493, 1506
AlwNI	CAGNNNCTG	2 cut(s)	359, 758
Ama87I	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
AoxI	GGCC	4 cut(s)	253, 446, 1023, 1301
ApeKI	GCWGC	9 cut(s)	176, 191, 272, 281, 407, 479, 688, 1551, 2214
ApoI	RAATTY	8 cut(s)	387, 712, 935, 978, 1368, 1564, 1598, 2245
Asp700I	GAANNNNTTC	3 cut(s)	387, 935, 1799
AspLEI	GCGC	2 cut(s)	2281, 2526
AspS9I	GGNCC	1 cut(s)	1302
AsuC2I	CCSGG	4 cut(s)	1305, 1306, 1414, 2560
AsuHPI	GGTGA	5 cut(s)	112, 1133, 1138, 1927, 2308
AsuNHI	GCTAGC	1 cut(s)	580
AvaI	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
AxyI	CCTNAGG	1 cut(s)	849
BaeI	ACNNNNGTAYC	2 cut(s)	1668, 1701
BamHI	GGATCC	1 cut(s)	1498
BanI	GGYRCC	1 cut(s)	1873
BanII	GRGCYC	1 cut(s)	2087
BbsI	GAAGAC	3 cut(s)	893, 1199, 2049
Bbv12I	GWGCWC	1 cut(s)	2120
BbvI	GCAGC	9 cut(s)	163, 203, 259, 268, 419, 466, 700, 1538, 2226
BccI	CCATC	7 cut(s)	778, 863, 1181, 1426, 1480, 1520, 1885
BceAI	ACGGC	1 cut(s)	426
BcgI	CGANNNNNNTGC	2 cut(s)	461, 495
BciT130I	CCWGG	3 cut(s)	975, 1455, 2225
BciVI	GTATCC	1 cut(s)	898
BcnI	CCSGG	4 cut(s)	1305, 1306, 1414, 2560
BcoDI	GTCTC	5 cut(s)	21, 326, 590, 2186, 2549
BcuI	ACTAGT	2 cut(s)	908, 1639
BfmI	CTRYAG	2 cut(s)	15, 1975
BfrI	CTTAAG	1 cut(s)	2029
BfuI	GTATCC	1 cut(s)	898
BglII	AGATCT	1 cut(s)	2404
Bme1390I	CCNGG	7 cut(s)	975, 1305, 1306, 1414, 1455, 2225, 2560
BmeT110I	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
BmgT120I	GGNCC	1 cut(s)	1302
BmiI	GGNNCC	3 cut(s)	1500, 1865, 1875
BmrFI	CCNGG	7 cut(s)	975, 1305, 1306, 1414, 1455, 2225, 2560
BmrI	ACTGGG	1 cut(s)	887
BmsI	GCATC	3 cut(s)	1119, 1651, 1842
BmtI	GCTAGC	1 cut(s)	584
BmuI	ACTGGG	1 cut(s)	887
BpiI	GAAGAC	3 cut(s)	893, 1199, 2049
BpmI	CTGGAG	3 cut(s)	1206, 1751, 2432
Bpu10I	CCTNAGC	1 cut(s)	1921
BpuEI	CTTGAG	3 cut(s)	1709, 1889, 2020
BpuMI	CCSGG	4 cut(s)	1305, 1306, 1414, 2560
BsaI	GGTCTC	2 cut(s)	21, 2549
BsaJI	CCNNGG	4 cut(s)	1304, 1413, 1453, 2559
BsaXI	ACNNNNNCTCC	6 cut(s)	492, 522, 1110, 1140, 1956, 1986
Bsc4I	CCNNNNNNNGG	2 cut(s)	1229, 1335
Bse1I	ACTGG	5 cut(s)	527, 882, 1831, 2415, 2450
Bse21I	CCTNAGG	1 cut(s)	849
Bse3DI	GCAATG	2 cut(s)	1297, 1347
BseBI	CCWGG	3 cut(s)	975, 1455, 2225
BseDI	CCNNGG	4 cut(s)	1304, 1413, 1453, 2559
BseGI	GGATG	4 cut(s)	679, 874, 1192, 1791
BseLI	CCNNNNNNNGG	2 cut(s)	1229, 1335
BseMI	GCAATG	2 cut(s)	1297, 1347
BseMII	CTCAG	6 cut(s)	497, 585, 645, 863, 1131, 2072
BseNI	ACTGG	5 cut(s)	527, 882, 1831, 2415, 2450
BseRI	GAGGAG	2 cut(s)	1787, 2128
BseXI	GCAGC	9 cut(s)	163, 203, 259, 268, 419, 466, 700, 1538, 2226
BseYI	CCCAGC	1 cut(s)	1335
Bsh1236I	CGCG	2 cut(s)	258, 1696
BshFI	GGCC	4 cut(s)	255, 448, 1025, 1303
BshNI	GGYRCC	1 cut(s)	1873
BsiHKAI	GWGCWC	1 cut(s)	2120
BsiHKCI	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
BsiSI	CCGG	3 cut(s)	1305, 1413, 2559
BslI	CCNNNNNNNGG	2 cut(s)	1229, 1335
BsmAI	GTCTC	5 cut(s)	21, 326, 590, 2186, 2549
BsmI	GAATGC	1 cut(s)	1041
BsnI	GGCC	4 cut(s)	255, 448, 1025, 1303
Bso31I	GGTCTC	2 cut(s)	21, 2549
BsoBI	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
Bsp1286I	GDGCHC	2 cut(s)	2087, 2120
Bsp143I	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
BspACI	CCGC	3 cut(s)	256, 428, 1694
BspANI	GGCC	4 cut(s)	255, 448, 1025, 1303
BspCNI	CTCAG	6 cut(s)	496, 586, 646, 862, 1132, 2073
BspFNI	CGCG	2 cut(s)	258, 1696
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	3 cut(s)	1500, 1865, 1875
BspOI	GCTAGC	1 cut(s)	584
BspPI	GGATC	3 cut(s)	1178, 1493, 1506
BspQI	GCTCTTC	1 cut(s)	993
BspT107I	GGYRCC	1 cut(s)	1873
BspTI	CTTAAG	1 cut(s)	2029
BspTNI	GGTCTC	2 cut(s)	21, 2549
BsrDI	GCAATG	2 cut(s)	1297, 1347
BsrI	ACTGG	5 cut(s)	527, 882, 1831, 2415, 2450
BssECI	CCNNGG	4 cut(s)	1304, 1413, 1453, 2559
BssMI	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
Bst2UI	CCWGG	3 cut(s)	975, 1455, 2225
Bst4CI	ACNGT	7 cut(s)	213, 355, 754, 1633, 1684, 2197, 2333
Bst6I	CTCTTC	2 cut(s)	993, 1056
BstAFI	CTTAAG	1 cut(s)	2029
BstC8I	GCNNGC	6 cut(s)	469, 582, 1023, 1556, 1580, 2522
BstF5I	GGATG	4 cut(s)	679, 874, 1192, 1791
BstFNI	CGCG	2 cut(s)	258, 1696
BstHHI	GCGC	2 cut(s)	2281, 2526
BstKTI	GATC	6 cut(s)	1173, 1501, 1543, 2028, 2407, 2443
BstMAI	GTCTC	5 cut(s)	21, 326, 590, 2186, 2549
BstMBI	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
BstMWI	GCNNNNNNNGC	8 cut(s)	98, 278, 281, 806, 992, 1309, 2278, 2532
BstNI	CCWGG	3 cut(s)	975, 1455, 2225
BstSCI	CCNGG	7 cut(s)	973, 1303, 1304, 1412, 1453, 2223, 2558
BstSFI	CTRYAG	2 cut(s)	15, 1975
BstUI	CGCG	2 cut(s)	258, 1696
BstV1I	GCAGC	9 cut(s)	163, 203, 259, 268, 419, 466, 700, 1538, 2226
BstV2I	GAAGAC	3 cut(s)	893, 1199, 2049
BstX2I	RGATCY	2 cut(s)	1498, 2404
BstXI	CCANNNNNNTGG	2 cut(s)	1613, 2336
BstYI	RGATCY	2 cut(s)	1498, 2404
Bsu36I	CCTNAGG	1 cut(s)	849
BsuI	GTATCC	1 cut(s)	898
BsuRI	GGCC	4 cut(s)	255, 448, 1025, 1303
BtsCI	GGATG	4 cut(s)	679, 874, 1192, 1791
BtsI	GCAGTG	1 cut(s)	2043
BtsIMutI	CAGTG	5 cut(s)	875, 1347, 1900, 2043, 2443
Cac8I	GCNNGC	6 cut(s)	469, 582, 1023, 1556, 1580, 2522
CaiI	CAGNNNCTG	2 cut(s)	359, 758
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	2 cut(s)	2281, 2526
Cfr13I	GGNCC	1 cut(s)	1302
Cfr9I	CCCGGG	1 cut(s)	1304
Csp6I	GTAC	5 cut(s)	311, 873, 1319, 1592, 1685
CviAII	CATG	8 cut(s)	224, 328, 1247, 1503, 1586, 1595, 1782, 1806
CviQI	GTAC	5 cut(s)	311, 873, 1319, 1592, 1685
DpnI	GATC	6 cut(s)	1172, 1500, 1542, 2027, 2406, 2442
DpnII	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
EaeI	YGGCCR	1 cut(s)	253
Eam1104I	CTCTTC	2 cut(s)	993, 1056
EarI	CTCTTC	2 cut(s)	993, 1056
Eco24I	GRGCYC	1 cut(s)	2087
Eco31I	GGTCTC	2 cut(s)	21, 2549
Eco57I	CTGAAG	2 cut(s)	123, 719
Eco81I	CCTNAGG	1 cut(s)	849
Eco88I	CYCGRG	4 cut(s)	1304, 1467, 1989, 2528
EcoRI	GAATTC	1 cut(s)	935
EcoRII	CCWGG	3 cut(s)	973, 1453, 2223
EcoT22I	ATGCAT	2 cut(s)	497, 517
EcoT38I	GRGCYC	1 cut(s)	2087
FaeI	CATG	8 cut(s)	227, 331, 1250, 1506, 1589, 1598, 1785, 1809
FatI	CATG	8 cut(s)	223, 327, 1246, 1502, 1585, 1594, 1781, 1805
FauNDI	CATATG	1 cut(s)	2275
FblI	GTMKAC	1 cut(s)	1974
FokI	GGATG	4 cut(s)	686, 881, 1199, 1798
FriOI	GRGCYC	1 cut(s)	2087
FspI	TGCGCA	1 cut(s)	2280
GlaI	GCGC	2 cut(s)	2280, 2525
GsaI	CCCAGC	1 cut(s)	1339
GsuI	CTGGAG	3 cut(s)	1206, 1751, 2432
HaeIII	GGCC	4 cut(s)	255, 448, 1025, 1303
HapII	CCGG	3 cut(s)	1305, 1413, 2559
HhaI	GCGC	2 cut(s)	2281, 2526
Hin1II	CATG	8 cut(s)	227, 331, 1250, 1506, 1589, 1598, 1785, 1809
Hin6I	GCGC	2 cut(s)	2279, 2524
HinP1I	GCGC	2 cut(s)	2279, 2524
HincII	GTYRAC	1 cut(s)	2451
HindII	GTYRAC	1 cut(s)	2451
HindIII	AAGCTT	1 cut(s)	2518
HpaII	CCGG	3 cut(s)	1305, 1413, 2559
HphI	GGTGA	5 cut(s)	112, 1133, 1138, 1927, 2308
Hpy166II	GTNNAC	5 cut(s)	875, 1218, 1935, 1975, 2451
Hpy8I	GTNNAC	5 cut(s)	875, 1218, 1935, 1975, 2451
HpyAV	CCTTC	3 cut(s)	245, 1948, 2584
HpyCH4III	ACNGT	7 cut(s)	213, 355, 754, 1633, 1684, 2197, 2333
HpyCH4IV	ACGT	2 cut(s)	1814, 2464
HpyCH4V	TGCA	6 cut(s)	92, 191, 407, 495, 515, 1108
HpyF10VI	GCNNNNNNNGC	8 cut(s)	98, 278, 281, 806, 992, 1309, 2278, 2532
HpySE526I	ACGT	2 cut(s)	1814, 2464
Hsp92II	CATG	8 cut(s)	227, 331, 1250, 1506, 1589, 1598, 1785, 1809
HspAI	GCGC	2 cut(s)	2279, 2524
Kzo9I	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
LguI	GCTCTTC	1 cut(s)	993
LmnI	GCTCC	4 cut(s)	131, 797, 1380, 2115
Lsp1109I	GCAGC	9 cut(s)	163, 203, 259, 268, 419, 466, 700, 1538, 2226
LweI	GCATC	3 cut(s)	1119, 1651, 1842
MaeII	ACGT	2 cut(s)	1814, 2464
MaeIII	GTNAC	5 cut(s)	118, 754, 1294, 1822, 2092
MalI	GATC	6 cut(s)	1172, 1500, 1542, 2027, 2406, 2442
MboI	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
MflI	RGATCY	2 cut(s)	1498, 2404
MhlI	GDGCHC	2 cut(s)	2087, 2120
MlyI	GAGTC	8 cut(s)	592, 665, 1067, 1148, 1213, 1319, 1742, 1981
MmeI	TCCRAC	3 cut(s)	675, 2098, 2492
Mph1103I	ATGCAT	2 cut(s)	497, 517
MroXI	GAANNNNTTC	3 cut(s)	387, 935, 1799
MseI	TTAA	9 cut(s)	147, 510, 1094, 1251, 1602, 1838, 1905, 2030, 2632
MslI	CAYNNNNRTG	1 cut(s)	1611
MspA1I	CMGCKG	1 cut(s)	691
MspCI	CTTAAG	1 cut(s)	2029
MspI	CCGG	3 cut(s)	1305, 1413, 2559
MspR9I	CCNGG	7 cut(s)	975, 1305, 1306, 1414, 1455, 2225, 2560
Mva1269I	GAATGC	1 cut(s)	1041
MvaI	CCWGG	3 cut(s)	975, 1455, 2225
MvnI	CGCG	2 cut(s)	258, 1696
MwoI	GCNNNNNNNGC	8 cut(s)	98, 278, 281, 806, 992, 1309, 2278, 2532
NciI	CCSGG	4 cut(s)	1305, 1306, 1414, 2560
NdeI	CATATG	1 cut(s)	2275
NdeII	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
NheI	GCTAGC	1 cut(s)	580
NlaIII	CATG	8 cut(s)	227, 331, 1250, 1506, 1589, 1598, 1785, 1809
NlaIV	GGNNCC	3 cut(s)	1500, 1865, 1875
NmuCI	GTSAC	1 cut(s)	118
NsbI	TGCGCA	1 cut(s)	2280
NsiI	ATGCAT	2 cut(s)	497, 517
PaeR7I	CTCGAG	2 cut(s)	1989, 2528
PagI	TCATGA	1 cut(s)	223
PciSI	GCTCTTC	1 cut(s)	993
PctI	GAATGC	1 cut(s)	1041
PdmI	GAANNNNTTC	3 cut(s)	387, 935, 1799
PfeI	GAWTC	5 cut(s)	248, 803, 1136, 1164, 1909
PflMI	CCANNNNNTGG	2 cut(s)	1229, 1335
PleI	GAGTC	8 cut(s)	592, 664, 1066, 1148, 1213, 1319, 1741, 1981
PpsI	GAGTC	8 cut(s)	592, 664, 1066, 1148, 1213, 1319, 1741, 1981
Psp6I	CCWGG	3 cut(s)	973, 1453, 2223
PspFI	CCCAGC	1 cut(s)	1335
PspGI	CCWGG	3 cut(s)	973, 1453, 2223
PspN4I	GGNNCC	3 cut(s)	1500, 1865, 1875
PspPI	GGNCC	1 cut(s)	1302
PspXI	VCTCGAGB	1 cut(s)	1989
PsrI	GAACNNNNNNTAC	2 cut(s)	294, 326
PstNI	CAGNNNCTG	2 cut(s)	359, 758
PsuI	RGATCY	2 cut(s)	1498, 2404
PvuII	CAGCTG	1 cut(s)	691
RsaI	GTAC	5 cut(s)	312, 874, 1320, 1593, 1686
RsaNI	GTAC	5 cut(s)	311, 873, 1319, 1592, 1685
RseI	CAYNNNNRTG	1 cut(s)	1611
SapI	GCTCTTC	1 cut(s)	993
SaqAI	TTAA	9 cut(s)	147, 510, 1094, 1251, 1602, 1838, 1905, 2030, 2632
Sau3AI	GATC	6 cut(s)	1170, 1498, 1540, 2025, 2404, 2440
Sau96I	GGNCC	1 cut(s)	1302
SchI	GAGTC	8 cut(s)	592, 665, 1067, 1148, 1213, 1319, 1742, 1981
ScrFI	CCNGG	7 cut(s)	975, 1305, 1306, 1414, 1455, 2225, 2560
SduI	GDGCHC	2 cut(s)	2087, 2120
SfaNI	GCATC	3 cut(s)	1119, 1651, 1842
SfcI	CTRYAG	2 cut(s)	15, 1975
Sfr274I	CTCGAG	2 cut(s)	1989, 2528
SlaI	CTCGAG	2 cut(s)	1989, 2528
SmaI	CCCGGG	1 cut(s)	1306
SmiMI	CAYNNNNRTG	1 cut(s)	1611
SmlI	CTYRAG	6 cut(s)	1688, 1868, 1989, 2029, 2035, 2528
SmoI	CTYRAG	6 cut(s)	1688, 1868, 1989, 2029, 2035, 2528
SpeI	ACTAGT	2 cut(s)	908, 1639
SsiI	CCGC	3 cut(s)	256, 428, 1694
SspI	AATATT	1 cut(s)	1180
StyD4I	CCNGG	7 cut(s)	973, 1303, 1304, 1412, 1453, 2223, 2558
TaaI	ACNGT	7 cut(s)	213, 355, 754, 1633, 1684, 2197, 2333
TaiI	ACGT	2 cut(s)	1817, 2467
TaqI	TCGA	4 cut(s)	991, 1990, 2529, 2620
TatI	WGTACW	2 cut(s)	1591, 1684
TauI	GCSGC	2 cut(s)	258, 1696
TfiI	GAWTC	5 cut(s)	248, 803, 1136, 1164, 1909
Tru1I	TTAA	9 cut(s)	147, 510, 1094, 1251, 1602, 1838, 1905, 2030, 2632
Tru9I	TTAA	9 cut(s)	147, 510, 1094, 1251, 1602, 1838, 1905, 2030, 2632
TscAI	CASTG	5 cut(s)	882, 1354, 1900, 2050, 2450
TseFI	GTSAC	1 cut(s)	118
TseI	GCWGC	9 cut(s)	176, 191, 272, 281, 407, 479, 688, 1551, 2214
Tsp45I	GTSAC	1 cut(s)	118
TspGWI	ACGGA	2 cut(s)	1284, 1977
TspMI	CCCGGG	1 cut(s)	1304
TspRI	CASTG	5 cut(s)	882, 1354, 1900, 2050, 2450
Van91I	CCANNNNNTGG	2 cut(s)	1229, 1335
Vha464I	CTTAAG	1 cut(s)	2029
XapI	RAATTY	8 cut(s)	387, 712, 935, 978, 1368, 1564, 1598, 2245
XbaI	TCTAGA	1 cut(s)	2401
XhoI	CTCGAG	2 cut(s)	1989, 2528
XmaI	CCCGGG	1 cut(s)	1304
XmiI	GTMKAC	1 cut(s)	1974
XmnI	GAANNNNTTC	3 cut(s)	387, 935, 1799
Zsp2I	ATGCAT	2 cut(s)	497, 517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.