Glutamate-gated receptor that probably acts as non- selective cation channel
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peripla_BP_6 | PF13458 | 52 - 373 | 1.4e-20 | Periplasmic binding protein |
| ANF_receptor | PF01094 | 58 - 380 | 1.8e-37 | Receptor family ligand binding region |
| SBP_bac_3 | PF00497 | 453 - 785 | 2.9e-12 | Bacterial extracellular solute-binding proteins, family 3 |
| Lig_chan-Glu_bd | PF10613 | 455 - 552 | 9.8e-11 | Ligated ion channel L-glutamate- and glycine-binding site |
| Lig_chan | PF00060 | 569 - 822 | 6.9e-27 | Ligand-gated ion channel |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1169, 1394 |
| AccB1I | GGYRCC | 1 cut(s) | 1774 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1223, 1329 |
| AccII | CGCG | 1 cut(s) | 258 |
| AciI | CCGC | 3 cut(s) | 256, 428, 1101 |
| AcoI | YGGCCR | 1 cut(s) | 253 |
| AcsI | RAATTY | 8 cut(s) | 387, 712, 935, 978, 1468, 1499, 1613, 2146 |
| AcuI | CTGAAG | 2 cut(s) | 123, 719 |
| AfaI | GTAC | 4 cut(s) | 312, 874, 1140, 1587 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1223, 1325, 1329 |
| AflII | CTTAAG | 1 cut(s) | 1927 |
| AgeI | ACCGGT | 1 cut(s) | 1727 |
| AhlI | ACTAGT | 1 cut(s) | 908 |
| AjnI | CCWGG | 2 cut(s) | 920, 973 |
| Alw21I | GWGCWC | 1 cut(s) | 2018 |
| Alw26I | GTCTC | 5 cut(s) | 21, 326, 590, 2087, 2450 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 359, 758, 2000 |
| Ama87I | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| AoxI | GGCC | 5 cut(s) | 253, 446, 1023, 1295, 1732 |
| ApeKI | GCWGC | 8 cut(s) | 176, 191, 272, 281, 407, 479, 688, 2115 |
| ApoI | RAATTY | 8 cut(s) | 387, 712, 935, 978, 1468, 1499, 1613, 2146 |
| AsiGI | ACCGGT | 1 cut(s) | 1727 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 387, 935, 1700 |
| AspLEI | GCGC | 1 cut(s) | 2427 |
| AspS9I | GGNCC | 2 cut(s) | 1274, 1296 |
| AsuC2I | CCSGG | 4 cut(s) | 1299, 1300, 2126, 2461 |
| AsuHPI | GGTGA | 7 cut(s) | 112, 1043, 1145, 1586, 1735, 1828, 2209 |
| AsuNHI | GCTAGC | 1 cut(s) | 580 |
| AvaI | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| AvaII | GGWCC | 1 cut(s) | 1274 |
| AxyI | CCTNAGG | 1 cut(s) | 849 |
| BanI | GGYRCC | 1 cut(s) | 1774 |
| BanII | GRGCYC | 1 cut(s) | 1985 |
| BbsI | GAAGAC | 2 cut(s) | 1193, 1947 |
| Bbv12I | GWGCWC | 1 cut(s) | 2018 |
| BbvI | GCAGC | 8 cut(s) | 163, 203, 259, 268, 419, 466, 700, 2127 |
| BccI | CCATC | 3 cut(s) | 778, 1175, 1786 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 461, 495 |
| BciT130I | CCWGG | 2 cut(s) | 922, 975 |
| BcnI | CCSGG | 4 cut(s) | 1299, 1300, 2126, 2461 |
| BcoDI | GTCTC | 5 cut(s) | 21, 326, 590, 2087, 2450 |
| BcuI | ACTAGT | 1 cut(s) | 908 |
| BfaI | CTAG | 9 cut(s) | 581, 777, 834, 909, 1041, 1059, 2066, 2280, 2303 |
| BfmI | CTRYAG | 1 cut(s) | 15 |
| BfrI | CTTAAG | 1 cut(s) | 1927 |
| BglII | AGATCT | 1 cut(s) | 2305 |
| BisI | GCNGC | 9 cut(s) | 177, 192, 256, 273, 282, 408, 480, 689, 2116 |
| BlsI | GCNGC | 9 cut(s) | 178, 193, 257, 274, 283, 409, 481, 690, 2117 |
| Bme1390I | CCNGG | 6 cut(s) | 922, 975, 1299, 1300, 2126, 2461 |
| Bme18I | GGWCC | 1 cut(s) | 1274 |
| BmeT110I | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| BmgT120I | GGNCC | 2 cut(s) | 1274, 1296 |
| BmiI | GGNNCC | 3 cut(s) | 1304, 1766, 1776 |
| BmrFI | CCNGG | 6 cut(s) | 922, 975, 1299, 1300, 2126, 2461 |
| BmsI | GCATC | 1 cut(s) | 1552 |
| BmtI | GCTAGC | 1 cut(s) | 584 |
| BpiI | GAAGAC | 2 cut(s) | 1193, 1947 |
| BpmI | CTGGAG | 2 cut(s) | 1652, 2333 |
| BpuEI | CTTGAG | 2 cut(s) | 1790, 1918 |
| BpuMI | CCSGG | 4 cut(s) | 1299, 1300, 2126, 2461 |
| BsaAI | YACGTR | 1 cut(s) | 1716 |
| BsaI | GGTCTC | 2 cut(s) | 21, 2450 |
| BsaJI | CCNNGG | 4 cut(s) | 1217, 1298, 1821, 2460 |
| BsaWI | WCCGGW | 1 cut(s) | 1727 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 492, 522, 1122, 1152 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1223, 1325, 1329 |
| Bse118I | RCCGGY | 1 cut(s) | 1727 |
| Bse1I | ACTGG | 4 cut(s) | 527, 1122, 2316, 2351 |
| Bse21I | CCTNAGG | 1 cut(s) | 849 |
| Bse3DI | GCAATG | 2 cut(s) | 1341, 2533 |
| BseBI | CCWGG | 2 cut(s) | 922, 975 |
| BseDI | CCNNGG | 4 cut(s) | 1217, 1298, 1821, 2460 |
| BseGI | GGATG | 3 cut(s) | 679, 1186, 1692 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1223, 1325, 1329 |
| BseMI | GCAATG | 2 cut(s) | 1341, 2533 |
| BseMII | CTCAG | 7 cut(s) | 497, 585, 645, 863, 1338, 1422, 1970 |
| BseNI | ACTGG | 4 cut(s) | 527, 1122, 2316, 2351 |
| BseRI | GAGGAG | 2 cut(s) | 1688, 2026 |
| BseXI | GCAGC | 8 cut(s) | 163, 203, 259, 268, 419, 466, 700, 2127 |
| BseYI | CCCAGC | 1 cut(s) | 1329 |
| Bsh1236I | CGCG | 1 cut(s) | 258 |
| BshFI | GGCC | 5 cut(s) | 255, 448, 1025, 1297, 1734 |
| BshNI | GGYRCC | 1 cut(s) | 1774 |
| BshTI | ACCGGT | 1 cut(s) | 1727 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2018 |
| BsiHKCI | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| BsiSI | CCGG | 4 cut(s) | 1299, 1728, 2126, 2460 |
| BslFI | GGGAC | 2 cut(s) | 917, 1302 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1223, 1325, 1329 |
| BsmAI | GTCTC | 5 cut(s) | 21, 326, 590, 2087, 2450 |
| BsmFI | GGGAC | 2 cut(s) | 917, 1302 |
| BsmI | GAATGC | 1 cut(s) | 1440 |
| BsnI | GGCC | 5 cut(s) | 255, 448, 1025, 1297, 1734 |
| Bso31I | GGTCTC | 2 cut(s) | 21, 2450 |
| BsoBI | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1985, 2018 |
| Bsp143I | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| BspACI | CCGC | 3 cut(s) | 256, 428, 1101 |
| BspANI | GGCC | 5 cut(s) | 255, 448, 1025, 1297, 1734 |
| BspCNI | CTCAG | 7 cut(s) | 496, 586, 646, 862, 1339, 1421, 1971 |
| BspFNI | CGCG | 1 cut(s) | 258 |
| BspHI | TCATGA | 2 cut(s) | 223, 1504 |
| BspLI | GGNNCC | 3 cut(s) | 1304, 1766, 1776 |
| BspOI | GCTAGC | 1 cut(s) | 584 |
| BspQI | GCTCTTC | 1 cut(s) | 993 |
| BspT107I | GGYRCC | 1 cut(s) | 1774 |
| BspTI | CTTAAG | 1 cut(s) | 1927 |
| BspTNI | GGTCTC | 2 cut(s) | 21, 2450 |
| BsrDI | GCAATG | 2 cut(s) | 1341, 2533 |
| BsrFI | RCCGGY | 1 cut(s) | 1727 |
| BsrI | ACTGG | 4 cut(s) | 527, 1122, 2316, 2351 |
| BssAI | RCCGGY | 1 cut(s) | 1727 |
| BssECI | CCNNGG | 4 cut(s) | 1217, 1298, 1821, 2460 |
| BssMI | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| BssT1I | CCWWGG | 2 cut(s) | 1217, 1821 |
| Bst2UI | CCWGG | 2 cut(s) | 922, 975 |
| Bst6I | CTCTTC | 1 cut(s) | 993 |
| BstAFI | CTTAAG | 1 cut(s) | 1927 |
| BstBAI | YACGTR | 1 cut(s) | 1716 |
| BstC8I | GCNNGC | 3 cut(s) | 469, 582, 2423 |
| BstEII | GGTNACC | 1 cut(s) | 1723 |
| BstF5I | GGATG | 3 cut(s) | 679, 1186, 1692 |
| BstFNI | CGCG | 1 cut(s) | 258 |
| BstHHI | GCGC | 1 cut(s) | 2427 |
| BstKTI | GATC | 4 cut(s) | 1014, 1926, 2308, 2344 |
| BstMAI | GTCTC | 5 cut(s) | 21, 326, 590, 2087, 2450 |
| BstMBI | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 98, 278, 281, 806, 992, 1098, 2433 |
| BstNI | CCWGG | 2 cut(s) | 922, 975 |
| BstPI | GGTNACC | 1 cut(s) | 1723 |
| BstSCI | CCNGG | 6 cut(s) | 920, 973, 1297, 1298, 2124, 2459 |
| BstSFI | CTRYAG | 1 cut(s) | 15 |
| BstUI | CGCG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 8 cut(s) | 163, 203, 259, 268, 419, 466, 700, 2127 |
| BstV2I | GAAGAC | 2 cut(s) | 1193, 1947 |
| BstX2I | RGATCY | 1 cut(s) | 2305 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2237 |
| BstYI | RGATCY | 1 cut(s) | 2305 |
| Bsu36I | CCTNAGG | 1 cut(s) | 849 |
| BsuRI | GGCC | 5 cut(s) | 255, 448, 1025, 1297, 1734 |
| BtsCI | GGATG | 3 cut(s) | 679, 1186, 1692 |
| BtsI | GCAGTG | 2 cut(s) | 1341, 1941 |
| BtsIMutI | CAGTG | 4 cut(s) | 1341, 1519, 1941, 2344 |
| Cac8I | GCNNGC | 3 cut(s) | 469, 582, 2423 |
| CaiI | CAGNNNCTG | 3 cut(s) | 359, 758, 2000 |
| CciI | TCATGA | 2 cut(s) | 223, 1504 |
| CfoI | GCGC | 1 cut(s) | 2427 |
| Cfr10I | RCCGGY | 1 cut(s) | 1727 |
| Cfr13I | GGNCC | 2 cut(s) | 1274, 1296 |
| Cfr9I | CCCGGG | 1 cut(s) | 1298 |
| Csp6I | GTAC | 4 cut(s) | 311, 873, 1139, 1586 |
| CspAI | ACCGGT | 1 cut(s) | 1727 |
| CviAII | CATG | 5 cut(s) | 224, 328, 1505, 1683, 1707 |
| CviQI | GTAC | 4 cut(s) | 311, 873, 1139, 1586 |
| DpnI | GATC | 4 cut(s) | 1013, 1925, 2307, 2343 |
| DpnII | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| EaeI | YGGCCR | 1 cut(s) | 253 |
| Eam1104I | CTCTTC | 1 cut(s) | 993 |
| EarI | CTCTTC | 1 cut(s) | 993 |
| Eco130I | CCWWGG | 2 cut(s) | 1217, 1821 |
| Eco24I | GRGCYC | 1 cut(s) | 1985 |
| Eco31I | GGTCTC | 2 cut(s) | 21, 2450 |
| Eco47I | GGWCC | 1 cut(s) | 1274 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 719 |
| Eco81I | CCTNAGG | 1 cut(s) | 849 |
| Eco88I | CYCGRG | 4 cut(s) | 717, 1298, 1887, 2429 |
| Eco91I | GGTNACC | 1 cut(s) | 1723 |
| EcoO65I | GGTNACC | 1 cut(s) | 1723 |
| EcoRI | GAATTC | 2 cut(s) | 935, 1613 |
| EcoRII | CCWGG | 2 cut(s) | 920, 973 |
| EcoT14I | CCWWGG | 2 cut(s) | 1217, 1821 |
| EcoT22I | ATGCAT | 2 cut(s) | 497, 517 |
| EcoT38I | GRGCYC | 1 cut(s) | 1985 |
| ErhI | CCWWGG | 2 cut(s) | 1217, 1821 |
| FaeI | CATG | 5 cut(s) | 227, 331, 1508, 1686, 1710 |
| FaqI | GGGAC | 2 cut(s) | 917, 1302 |
| FatI | CATG | 5 cut(s) | 223, 327, 1504, 1682, 1706 |
| FauNDI | CATATG | 2 cut(s) | 1495, 2176 |
| Fnu4HI | GCNGC | 9 cut(s) | 177, 192, 256, 273, 282, 408, 480, 689, 2116 |
| FokI | GGATG | 3 cut(s) | 686, 1193, 1699 |
| FriOI | GRGCYC | 1 cut(s) | 1985 |
| Fsp4HI | GCNGC | 9 cut(s) | 177, 192, 256, 273, 282, 408, 480, 689, 2116 |
| FspBI | CTAG | 9 cut(s) | 581, 777, 834, 909, 1041, 1059, 2066, 2280, 2303 |
| GlaI | GCGC | 1 cut(s) | 2426 |
| GluI | GCNGC | 9 cut(s) | 177, 192, 256, 273, 282, 408, 480, 689, 2116 |
| GsaI | CCCAGC | 1 cut(s) | 1333 |
| GsuI | CTGGAG | 2 cut(s) | 1652, 2333 |
| HaeIII | GGCC | 5 cut(s) | 255, 448, 1025, 1297, 1734 |
| HapII | CCGG | 4 cut(s) | 1299, 1728, 2126, 2460 |
| HhaI | GCGC | 1 cut(s) | 2427 |
| Hin1II | CATG | 5 cut(s) | 227, 331, 1508, 1686, 1710 |
| Hin6I | GCGC | 1 cut(s) | 2425 |
| HinP1I | GCGC | 1 cut(s) | 2425 |
| HincII | GTYRAC | 2 cut(s) | 1282, 2352 |
| HindII | GTYRAC | 2 cut(s) | 1282, 2352 |
| HindIII | AAGCTT | 1 cut(s) | 2419 |
| HpaII | CCGG | 4 cut(s) | 1299, 1728, 2126, 2460 |
| HphI | GGTGA | 7 cut(s) | 112, 1043, 1145, 1586, 1735, 1828, 2209 |
| Hpy166II | GTNNAC | 4 cut(s) | 1282, 1836, 1873, 2352 |
| Hpy8I | GTNNAC | 4 cut(s) | 1282, 1836, 1873, 2352 |
| HpyAV | CCTTC | 7 cut(s) | 245, 863, 1073, 1121, 1414, 1849, 2485 |
| HpyCH4IV | ACGT | 3 cut(s) | 1315, 1715, 2365 |
| HpyCH4V | TGCA | 6 cut(s) | 92, 191, 407, 495, 515, 1440 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 98, 278, 281, 806, 992, 1098, 2433 |
| HpySE526I | ACGT | 3 cut(s) | 1315, 1715, 2365 |
| Hsp92II | CATG | 5 cut(s) | 227, 331, 1508, 1686, 1710 |
| HspAI | GCGC | 1 cut(s) | 2425 |
| Kzo9I | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| LguI | GCTCTTC | 1 cut(s) | 993 |
| LmnI | GCTCC | 3 cut(s) | 131, 797, 2013 |
| Lsp1109I | GCAGC | 8 cut(s) | 163, 203, 259, 268, 419, 466, 700, 2127 |
| LweI | GCATC | 1 cut(s) | 1552 |
| MaeI | CTAG | 9 cut(s) | 581, 777, 834, 909, 1041, 1059, 2066, 2280, 2303 |
| MaeII | ACGT | 3 cut(s) | 1315, 1715, 2365 |
| MaeIII | GTNAC | 4 cut(s) | 118, 754, 1723, 1990 |
| MalI | GATC | 4 cut(s) | 1013, 1925, 2307, 2343 |
| MboI | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| MflI | RGATCY | 1 cut(s) | 2305 |
| MhlI | GDGCHC | 2 cut(s) | 1985, 2018 |
| MlyI | GAGTC | 9 cut(s) | 592, 665, 1079, 1400, 1483, 1538, 1643, 1819, 1879 |
| MmeI | TCCRAC | 5 cut(s) | 675, 1125, 1252, 1996, 2393 |
| Mph1103I | ATGCAT | 2 cut(s) | 497, 517 |
| MroXI | GAANNNNTTC | 3 cut(s) | 387, 935, 1700 |
| MseI | TTAA | 7 cut(s) | 147, 510, 1202, 1739, 1806, 1928, 2533 |
| MspA1I | CMGCKG | 2 cut(s) | 691, 1101 |
| MspCI | CTTAAG | 1 cut(s) | 1927 |
| MspI | CCGG | 4 cut(s) | 1299, 1728, 2126, 2460 |
| MspR9I | CCNGG | 6 cut(s) | 922, 975, 1299, 1300, 2126, 2461 |
| Mva1269I | GAATGC | 1 cut(s) | 1440 |
| MvaI | CCWGG | 2 cut(s) | 922, 975 |
| MvnI | CGCG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 98, 278, 281, 806, 992, 1098, 2433 |
| NciI | CCSGG | 4 cut(s) | 1299, 1300, 2126, 2461 |
| NdeI | CATATG | 2 cut(s) | 1495, 2176 |
| NdeII | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| NheI | GCTAGC | 1 cut(s) | 580 |
| NlaIII | CATG | 5 cut(s) | 227, 331, 1508, 1686, 1710 |
| NlaIV | GGNNCC | 3 cut(s) | 1304, 1766, 1776 |
| NmuCI | GTSAC | 2 cut(s) | 118, 1723 |
| NsiI | ATGCAT | 2 cut(s) | 497, 517 |
| PaeR7I | CTCGAG | 2 cut(s) | 1887, 2429 |
| PagI | TCATGA | 2 cut(s) | 223, 1504 |
| PciSI | GCTCTTC | 1 cut(s) | 993 |
| PctI | GAATGC | 1 cut(s) | 1440 |
| PdmI | GAANNNNTTC | 3 cut(s) | 387, 935, 1700 |
| PfeI | GAWTC | 7 cut(s) | 248, 803, 882, 1148, 1369, 1538, 1599 |
| PflFI | GACNNNGTC | 1 cut(s) | 1286 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1223, 1329 |
| PinAI | ACCGGT | 1 cut(s) | 1727 |
| PkrI | GCNGC | 9 cut(s) | 178, 193, 257, 274, 283, 409, 481, 690, 2117 |
| PleI | GAGTC | 9 cut(s) | 592, 664, 1078, 1400, 1482, 1537, 1642, 1818, 1879 |
| PpsI | GAGTC | 9 cut(s) | 592, 664, 1078, 1400, 1482, 1537, 1642, 1818, 1879 |
| Ppu21I | YACGTR | 1 cut(s) | 1716 |
| PsiI | TTATAA | 2 cut(s) | 1169, 1394 |
| Psp6I | CCWGG | 2 cut(s) | 920, 973 |
| PspEI | GGTNACC | 1 cut(s) | 1723 |
| PspFI | CCCAGC | 1 cut(s) | 1329 |
| PspGI | CCWGG | 2 cut(s) | 920, 973 |
| PspN4I | GGNNCC | 3 cut(s) | 1304, 1766, 1776 |
| PspPI | GGNCC | 2 cut(s) | 1274, 1296 |
| PspXI | VCTCGAGB | 1 cut(s) | 1887 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 294, 326 |
| PstNI | CAGNNNCTG | 3 cut(s) | 359, 758, 2000 |
| PsuI | RGATCY | 1 cut(s) | 2305 |
| PsyI | GACNNNGTC | 1 cut(s) | 1286 |
| PvuII | CAGCTG | 1 cut(s) | 691 |
| RsaI | GTAC | 4 cut(s) | 312, 874, 1140, 1587 |
| RsaNI | GTAC | 4 cut(s) | 311, 873, 1139, 1586 |
| SapI | GCTCTTC | 1 cut(s) | 993 |
| SaqAI | TTAA | 7 cut(s) | 147, 510, 1202, 1739, 1806, 1928, 2533 |
| SatI | GCNGC | 9 cut(s) | 177, 192, 256, 273, 282, 408, 480, 689, 2116 |
| Sau3AI | GATC | 4 cut(s) | 1011, 1923, 2305, 2341 |
| Sau96I | GGNCC | 2 cut(s) | 1274, 1296 |
| SchI | GAGTC | 9 cut(s) | 592, 665, 1079, 1400, 1483, 1538, 1643, 1819, 1879 |
| ScrFI | CCNGG | 6 cut(s) | 922, 975, 1299, 1300, 2126, 2461 |
| SduI | GDGCHC | 2 cut(s) | 1985, 2018 |
| SfaNI | GCATC | 1 cut(s) | 1552 |
| SfcI | CTRYAG | 1 cut(s) | 15 |
| Sfr274I | CTCGAG | 2 cut(s) | 1887, 2429 |
| SinI | GGWCC | 1 cut(s) | 1274 |
| SlaI | CTCGAG | 2 cut(s) | 1887, 2429 |
| SmaI | CCCGGG | 1 cut(s) | 1300 |
| SmlI | CTYRAG | 5 cut(s) | 1769, 1887, 1927, 1933, 2429 |
| SmoI | CTYRAG | 5 cut(s) | 1769, 1887, 1927, 1933, 2429 |
| SpeI | ACTAGT | 1 cut(s) | 908 |
| SsiI | CCGC | 3 cut(s) | 256, 428, 1101 |
| SspI | AATATT | 1 cut(s) | 1174 |
| SspMI | CTAG | 9 cut(s) | 581, 777, 834, 909, 1041, 1059, 2066, 2280, 2303 |
| StyD4I | CCNGG | 6 cut(s) | 920, 973, 1297, 1298, 2124, 2459 |
| StyI | CCWWGG | 2 cut(s) | 1217, 1821 |
| TaiI | ACGT | 3 cut(s) | 1318, 1718, 2368 |
| TaqI | TCGA | 8 cut(s) | 991, 1010, 1154, 1532, 1602, 1888, 2430, 2521 |
| TatI | WGTACW | 1 cut(s) | 1585 |
| TauI | GCSGC | 1 cut(s) | 258 |
| TfiI | GAWTC | 7 cut(s) | 248, 803, 882, 1148, 1369, 1538, 1599 |
| Tru1I | TTAA | 7 cut(s) | 147, 510, 1202, 1739, 1806, 1928, 2533 |
| Tru9I | TTAA | 7 cut(s) | 147, 510, 1202, 1739, 1806, 1928, 2533 |
| TscAI | CASTG | 4 cut(s) | 1348, 1519, 1948, 2351 |
| TseFI | GTSAC | 2 cut(s) | 118, 1723 |
| TseI | GCWGC | 8 cut(s) | 176, 191, 272, 281, 407, 479, 688, 2115 |
| Tsp45I | GTSAC | 2 cut(s) | 118, 1723 |
| TspDTI | ATGAA | 9 cut(s) | 123, 227, 503, 561, 690, 1140, 1493, 1512, 2037 |
| TspGWI | ACGGA | 1 cut(s) | 1205 |
| TspMI | CCCGGG | 1 cut(s) | 1298 |
| TspRI | CASTG | 4 cut(s) | 1348, 1519, 1948, 2351 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1286 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1223, 1329 |
| Vha464I | CTTAAG | 1 cut(s) | 1927 |
| VpaK11BI | GGWCC | 1 cut(s) | 1274 |
| XapI | RAATTY | 8 cut(s) | 387, 712, 935, 978, 1468, 1499, 1613, 2146 |
| XbaI | TCTAGA | 1 cut(s) | 2302 |
| XhoI | CTCGAG | 2 cut(s) | 1887, 2429 |
| XmaI | CCCGGG | 1 cut(s) | 1298 |
| XmnI | GAANNNNTTC | 3 cut(s) | 387, 935, 1700 |
| XspI | CTAG | 9 cut(s) | 581, 777, 834, 909, 1041, 1059, 2066, 2280, 2303 |
| Zsp2I | ATGCAT | 2 cut(s) | 497, 517 |