Rorug04G0447100

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
60268232 .. 60273030
4799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0447100.1

Sequence Viewer

Length: 2202 bp
ATGCCTTCAAAGGGCAAGAAGAACTCAAAGTCCCAATCGAGGGACAGCTTTGCCTCTTCTGGGTCGATCGATTTTGAACCCAATGAAGTGGGTTTTGCCACCTCTCTTGAACAAGCTTCCAGTAAATACCCATCTCTGATTGCGAAATCTGCTTTCATTGGTCAAGTCACCGATGTCGATGACACCTCCAAAAGCTGTAAGATTTGGCTTTCAGAGCCTTCCATGGTTGCCAATTCCTTCACTCCTGGCTCCATTGTATCGGTGTCACTACCTTGTTTGAGAAGTAGAGTTTCAGAGAGCTTTCCTCTCAGCTCATTAGCAGATGAATGTGCTAGATGTTTCGGGGTTGAGTCTTGCCAAGGTTTGGCTAATGAACCAGGGAACTACTTTGCTCTTGCAACTATATTTCCTTCTTCTAAGGTTTCAAAGAATGGGGTACGACTGTCTTCAAATCTTTCAAAAACCATGGGTTGTCTTGCATCAGGCAGGATCATATTTATCCACTCCGTACAAAATACAGTCCGAGCTGGTCTTTTAAGTGATACAGAAAAACCATGTAGTACCAAAGATTGCCTCTCTGTGTCTGACTGTAAGGAGTTGATTTTGGAGCTACTCCATTCCAACAGTAGATTAACCATGAACACTACCTCTACAAACACTTCTGCTGAAAAATCGTTTTACCGGCCTGAAAATGGAATGCCTGCATCCCCTAAGACACCATTGAATCCATCAAAGCTTAGCTTTTCTAATAGAAGTCCATTAGCTTCACCTCGACGTGAGGAGTCAGCATCAAGTGTAATCACTGCAGATGAAAAATTTGTTGAACCTTTTGATGTTGAAGAGGTTTTAGGGGATGACACTTCAAAAAGACTTCTTCAGACGTGTGCCACTACATGGTTGTATTCTCGTTGTTTACTTCGTGGAAATCTAGTGACTATTCCAGTGCTTTCACAGCATTGTTTACTTCGAGTCATTGGTGCTAAGAGTTCATCAGATGATAAAGCTAATCATGACTTGCTTCATGAGTCCTCCGAGTTAGTGGACAAAGTAAATGATGCTTTTCTAGTGAAGCGGGAAACAAAAGTATGCTTTCATCTGCCATCAAACCTGGAATCTAAAAGAACAGATCTTTCTACAGTGCAATGCAAGGATACTATAGCTAAAACAGGAGATGACTCATCAAGACTGGGTGGTCTTTCAAAAGAATATGCAGTTTTGAAGGACATCATAATATCATCATCTATGGACACCTTGTCACGTCTTGGTTTACGACCTACAAAGGGAGTGCTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCTTTGGCTCGATTATGTGCCCGTGATGCTGGTGTCAACTTTTTCTCTGTCAATGGACCTGAAGTTGTGAGTCAGTACTATGGAAAAAGTGAGCAAGCCTTACGTGAAGTTTTTGACTCAGCTAGCCAAGCTGCACCTTCTGTGGTATTCATTGATGAGTTGGATGCAATTGCACCTGCAAGGAAAGAGGGAGGTGAAGAGCTATCTCTGAGAATGGTTGCTACACTGCTGAATTTGATGGATGGGATTAGTACAACTGAAAGAGTACTTGTAATTGCTGCTACCAACAGGCCTGATAGTATTGAGCCTGCACTCAGACGACCTGGAAGACTTGACAGGGAAATTGAAATAGGAGTGCCGTCTCCCAAGCAACGGCTTGAGATTCTACATGTTCTTGTTGGTGAAATGGAGCACTGTCTTTCAGATGTGCAAGTCCAACAACTTGCTAATGCTACACATGGTTTCGTAGGCTCTGATCTAGCTGCCCTTTGCAATGAGGCAGCCTTCAGTTCTCTTAGGCGTTATGTCAATTCTAGATATCCTCATGATTATTTGCATAGAACATCTAGTACTTATGAAGATTGTTCCAACAGTCTAATGGTACATGATTGCTTAGAAGATACAACAGACATGTCAAGGGATTACTCAGATACTGCATCTTCATCTATCACACATTTGGCGTTTTCTTCAGAGAATTGTTTGTCTGTGCATTTGAAGGGAACAAATCAAGATGATGATATTGAAGAAGAATTAAAAGTGGCTTTTAAAGATTTTGAAAGTGCCAGGATGAAAGTGAGGCCCAGTGCTATGCGAGAGGTAATCGTTGAGGTCCCGAAGGTTAATTGGGAAGATGTTGGTGGCCAGACGGAGGTGATTAGGTGA

Protein Analysis

733

Amino Acids

79.94

Weight (kDa)

5.66

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DPBB_CI111 PF26429 35 - 170 4.7e-59 CI111 double-psi beta barrel domain
AAA_16 PF13191 427 - 532 1.2e-07 AAA ATPase domain
RuvB_N PF05496 427 - 501 9.9e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 429 - 558 3.3e-44 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 582 - 618 3.3e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1504
AasI GACNNNNNNGTC 1 cut(s) 1191
Acc36I ACCTGC 1 cut(s) 1504
AccB7I CCANNNNNTGG 2 cut(s) 364, 894
AciI CCGC 1 cut(s) 1072
AclWI GGATC 1 cut(s) 497
AcoI YGGCCR 1 cut(s) 2179
AcsI RAATTY 2 cut(s) 815, 1552
AcuI CTGAAG 4 cut(s) 860, 1401, 1810, 1992
AfaI GTAC 9 cut(s) 438, 510, 562, 1309, 1397, 1573, 1587, 1891, 1923
AflIII ACRYGT 3 cut(s) 881, 1708, 1950
AhdI GACNNNNNGTC 1 cut(s) 1252
AjiI CACGTC 3 cut(s) 776, 882, 1259
AjnI CCWGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
AloI GAACNNNNNNTCC 2 cut(s) 14, 46
Alw21I GWGCWC 1 cut(s) 1734
Alw26I GTCTC 1 cut(s) 1686
AlwI GGATC 1 cut(s) 497
AlwNI CAGNNNCTG 1 cut(s) 1973
AoxI GGCC 4 cut(s) 683, 1610, 2117, 2179
ApeKI GCWGC 4 cut(s) 1451, 1598, 1802, 1820
ApoI RAATTY 2 cut(s) 815, 1552
Asp700I GAANNNNTTC 1 cut(s) 1318
AspS9I GGNCC 4 cut(s) 1298, 1376, 2118, 2149
AsuHPI GGTGA 4 cut(s) 160, 759, 1526, 1733
AsuNHI GCTAGC 1 cut(s) 1442
AvaII GGWCC 3 cut(s) 1298, 1376, 2149
BaeGI GKGCMC 1 cut(s) 1342
BaeI ACNNNNGTAYC 2 cut(s) 428, 461
BalI TGGCCA 1 cut(s) 2181
BbsI GAAGAC 2 cut(s) 438, 1654
Bbv12I GWGCWC 1 cut(s) 1734
BbvI GCAGC 4 cut(s) 1438, 1585, 1789, 1832
BccI CCATC 5 cut(s) 139, 736, 1108, 1552, 1556
BceAI ACGGC 2 cut(s) 1663, 1709
BciT130I CCWGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
BciVI GTATCC 1 cut(s) 1144
BcoDI GTCTC 1 cut(s) 1686
BfaI CTAG 7 cut(s) 333, 929, 1064, 1443, 1799, 1854, 1887
BfmI CTRYAG 3 cut(s) 804, 1134, 1155
BfuAI ACCTGC 1 cut(s) 1504
BfuI GTATCC 1 cut(s) 1144
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 4 cut(s) 1452, 1599, 1803, 1821
BlpI GCTNAGC 1 cut(s) 737
BlsI GCNGC 4 cut(s) 1453, 1600, 1804, 1822
BmcAI AGTACT 3 cut(s) 1397, 1587, 1891
Bme1390I CCNGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
Bme18I GGWCC 3 cut(s) 1298, 1376, 2149
BmeRI GACNNNNNGTC 1 cut(s) 1252
BmgBI CACGTC 3 cut(s) 776, 882, 1259
BmgT120I GGNCC 4 cut(s) 1298, 1376, 2118, 2149
BmiI GGNNCC 2 cut(s) 250, 2151
BmrFI CCNGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
BmrI ACTGGG 2 cut(s) 1196, 2115
BmsI GCATC 7 cut(s) 488, 713, 797, 1045, 1336, 1474, 1985
BmtI GCTAGC 1 cut(s) 1446
BmuI ACTGGG 2 cut(s) 1196, 2115
BpiI GAAGAC 2 cut(s) 438, 1654
BplI GAGNNNNNCTC 2 cut(s) 289, 321
Bpu1102I GCTNAGC 1 cut(s) 737
BpuEI CTTGAG 1 cut(s) 1718
Bsa29I ATCGAT 1 cut(s) 69
BsaAI YACGTR 1 cut(s) 1424
BsaJI CCNNGG 4 cut(s) 222, 358, 377, 465
Bse118I RCCGGY 1 cut(s) 681
Bse1I ACTGG 4 cut(s) 120, 941, 1191, 2121
Bse3DI GCAATG 2 cut(s) 1148, 1819
BseBI CCWGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
BseCI ATCGAT 1 cut(s) 69
BseDI CCNNGG 4 cut(s) 222, 358, 377, 465
BseGI GGATG 5 cut(s) 704, 859, 1489, 1567, 2112
BseMI GCAATG 2 cut(s) 1148, 1819
BseMII CTCAG 5 cut(s) 322, 1452, 1520, 1648, 1980
BseNI ACTGG 4 cut(s) 120, 941, 1191, 2121
BseRI GAGGAG 1 cut(s) 794
BseSI GKGCMC 1 cut(s) 1342
BseXI GCAGC 4 cut(s) 1438, 1585, 1789, 1832
BsgI GTGCAG 2 cut(s) 1437, 1614
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 4 cut(s) 685, 1612, 2119, 2181
BshVI ATCGAT 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 69
BsiHKAI GWGCWC 1 cut(s) 1734
BsiSI CCGG 1 cut(s) 682
BslFI GGGAC 3 cut(s) 16, 56, 2135
BsmAI GTCTC 1 cut(s) 1686
BsmBI CGTCTC 1 cut(s) 1686
BsmFI GGGAC 3 cut(s) 16, 56, 2135
BsmI GAATGC 1 cut(s) 702
BsnI GGCC 4 cut(s) 685, 1612, 2119, 2181
Bsp1286I GDGCHC 2 cut(s) 1342, 1734
Bsp143I GATC 4 cut(s) 66, 489, 1126, 1795
Bsp1720I GCTNAGC 1 cut(s) 737
Bsp19I CCATGG 2 cut(s) 222, 465
BspACI CCGC 1 cut(s) 1072
BspANI GGCC 4 cut(s) 685, 1612, 2119, 2181
BspCNI CTCAG 5 cut(s) 321, 1451, 1521, 1647, 1979
BspDI ATCGAT 1 cut(s) 69
BspHI TCATGA 3 cut(s) 1009, 1021, 1864
BspLI GGNNCC 2 cut(s) 250, 2151
BspMAI CTGCAG 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 1504
BspOI GCTAGC 1 cut(s) 1446
BspPI GGATC 1 cut(s) 497
BspQI GCTCTTC 1 cut(s) 1512
BsrDI GCAATG 2 cut(s) 1148, 1819
BsrFI RCCGGY 1 cut(s) 681
BsrI ACTGG 4 cut(s) 120, 941, 1191, 2121
BssAI RCCGGY 1 cut(s) 681
BssECI CCNNGG 4 cut(s) 222, 358, 377, 465
BssMI GATC 4 cut(s) 66, 489, 1126, 1795
BssT1I CCWWGG 3 cut(s) 222, 358, 465
Bst2UI CCWGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
Bst4CI ACNGT 7 cut(s) 444, 520, 590, 626, 1138, 1736, 1913
Bst6I CTCTTC 3 cut(s) 61, 834, 1512
BstBAI YACGTR 1 cut(s) 1424
BstC8I GCNNGC 4 cut(s) 702, 1416, 1444, 1629
BstDSI CCRYGG 2 cut(s) 222, 465
BstF5I GGATG 5 cut(s) 704, 859, 1489, 1567, 2112
BstKTI GATC 4 cut(s) 69, 492, 1129, 1798
BstMAI GTCTC 1 cut(s) 1686
BstMBI GATC 4 cut(s) 66, 489, 1126, 1795
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 5 cut(s) 149, 214, 952, 1346, 1448
BstNI CCWGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
BstNSI RCATGY 2 cut(s) 1712, 1954
BstSCI CCNGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
BstSFI CTRYAG 3 cut(s) 804, 1134, 1155
BstSLI GKGCMC 1 cut(s) 1342
BstV1I GCAGC 4 cut(s) 1438, 1585, 1789, 1832
BstV2I GAAGAC 2 cut(s) 438, 1654
BstX2I RGATCY 1 cut(s) 1126
BstXI CCANNNNNNTGG 1 cut(s) 88
BstYI RGATCY 1 cut(s) 1126
Bsu15I ATCGAT 1 cut(s) 69
BsuI GTATCC 1 cut(s) 1144
BsuRI GGCC 4 cut(s) 685, 1612, 2119, 2181
BsuTUI ATCGAT 1 cut(s) 69
BtgI CCRYGG 2 cut(s) 222, 465
BtrI CACGTC 3 cut(s) 776, 882, 1259
BtsCI GGATG 5 cut(s) 704, 859, 1489, 1567, 2112
BtsI GCAGTG 2 cut(s) 801, 1544
BtsIMutI CAGTG 6 cut(s) 801, 948, 1143, 1544, 1732, 2128
BveI ACCTGC 1 cut(s) 1504
Cac8I GCNNGC 4 cut(s) 702, 1416, 1444, 1629
CaiI CAGNNNCTG 1 cut(s) 1973
CciI TCATGA 3 cut(s) 1009, 1021, 1864
Cfr10I RCCGGY 1 cut(s) 681
Cfr13I GGNCC 4 cut(s) 1298, 1376, 2118, 2149
ClaI ATCGAT 1 cut(s) 69
CsiI ACCWGGT 1 cut(s) 1303
Csp6I GTAC 9 cut(s) 437, 509, 561, 1308, 1396, 1572, 1586, 1890, 1922
CspCI CAANNNNNGTGG 2 cut(s) 88, 123
CviQI GTAC 9 cut(s) 437, 509, 561, 1308, 1396, 1572, 1586, 1890, 1922
DpnI GATC 4 cut(s) 68, 491, 1128, 1797
DpnII GATC 4 cut(s) 66, 489, 1126, 1795
DraI TTTAAA 1 cut(s) 2086
DrdI GACNNNNNNGTC 1 cut(s) 1191
DriI GACNNNNNGTC 1 cut(s) 1252
DseDI GACNNNNNNGTC 1 cut(s) 1191
EaeI YGGCCR 1 cut(s) 2179
Eam1104I CTCTTC 3 cut(s) 61, 834, 1512
Eam1105I GACNNNNNGTC 1 cut(s) 1252
EarI CTCTTC 3 cut(s) 61, 834, 1512
Eco130I CCWWGG 3 cut(s) 222, 358, 465
Eco147I AGGCCT 1 cut(s) 1612
Eco32I GATATC 1 cut(s) 1859
Eco47I GGWCC 3 cut(s) 1298, 1376, 2149
Eco57I CTGAAG 4 cut(s) 860, 1401, 1810, 1992
EcoO109I RGGNCCY 1 cut(s) 2149
EcoRII CCWGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
EcoRV GATATC 1 cut(s) 1859
EcoT14I CCWWGG 3 cut(s) 222, 358, 465
ErhI CCWWGG 3 cut(s) 222, 358, 465
Esp3I CGTCTC 1 cut(s) 1686
FalI AAGNNNNNCTT 2 cut(s) 725, 757
FaqI GGGAC 3 cut(s) 16, 56, 2135
FauI CCCGC 1 cut(s) 1065
Fnu4HI GCNGC 4 cut(s) 1452, 1599, 1803, 1821
FokI GGATG 5 cut(s) 691, 866, 1496, 1574, 2119
Fsp4HI GCNGC 4 cut(s) 1452, 1599, 1803, 1821
FspBI CTAG 7 cut(s) 333, 929, 1064, 1443, 1799, 1854, 1887
GluI GCNGC 4 cut(s) 1452, 1599, 1803, 1821
HaeIII GGCC 4 cut(s) 685, 1612, 2119, 2181
HapII CCGG 1 cut(s) 682
HincII GTYRAC 1 cut(s) 1357
HindII GTYRAC 1 cut(s) 1357
HindIII AAGCTT 2 cut(s) 114, 734
HpaII CCGG 1 cut(s) 682
HphI GGTGA 4 cut(s) 160, 759, 1526, 1733
Hpy166II GTNNAC 6 cut(s) 914, 962, 1042, 1268, 1301, 1357
Hpy188III TCNNGA 8 cut(s) 107, 1010, 1022, 1182, 1854, 1865, 2048, 2152
Hpy8I GTNNAC 6 cut(s) 914, 962, 1042, 1268, 1301, 1357
Hpy99I CGWCG 1 cut(s) 777
HpyAV CCTTC 9 cut(s) 15, 228, 247, 420, 1213, 1467, 1834, 2029, 2149
HpyCH4III ACNGT 7 cut(s) 444, 520, 590, 626, 1138, 1736, 1913
HpyCH4IV ACGT 4 cut(s) 775, 881, 1258, 1423
HpyF10VI GCNNNNNNNGC 5 cut(s) 149, 214, 952, 1346, 1448
HpySE526I ACGT 4 cut(s) 775, 881, 1258, 1423
Kzo9I GATC 4 cut(s) 66, 489, 1126, 1795
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 3 cut(s) 254, 607, 1729
Lsp1109I GCAGC 4 cut(s) 1438, 1585, 1789, 1832
LweI GCATC 7 cut(s) 488, 713, 797, 1045, 1336, 1474, 1985
MabI ACCWGGT 1 cut(s) 1303
MaeI CTAG 7 cut(s) 333, 929, 1064, 1443, 1799, 1854, 1887
MaeII ACGT 4 cut(s) 775, 881, 1258, 1423
MaeIII GTNAC 4 cut(s) 166, 264, 931, 1254
MalI GATC 4 cut(s) 68, 491, 1128, 1797
MboI GATC 4 cut(s) 66, 489, 1126, 1795
MfeI CAATTG 1 cut(s) 1488
MflI RGATCY 1 cut(s) 1126
MhlI GDGCHC 2 cut(s) 1342, 1734
MlsI TGGCCA 1 cut(s) 2181
MluNI TGGCCA 1 cut(s) 2181
MlyI GAGTC 7 cut(s) 359, 791, 978, 1034, 1169, 1399, 1430
MmeI TCCRAC 4 cut(s) 645, 1461, 1780, 1932
Mox20I TGGCCA 1 cut(s) 2181
MroXI GAANNNNTTC 1 cut(s) 1318
MscI TGGCCA 1 cut(s) 2181
MseI TTAA 5 cut(s) 536, 632, 2072, 2085, 2160
Msp20I TGGCCA 1 cut(s) 2181
MspI CCGG 1 cut(s) 682
MspR9I CCNGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
MunI CAATTG 1 cut(s) 1488
Mva1269I GAATGC 1 cut(s) 702
MvaI CCWGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
MwoI GCNNNNNNNGC 5 cut(s) 149, 214, 952, 1346, 1448
NcoI CCATGG 2 cut(s) 222, 465
NdeII GATC 4 cut(s) 66, 489, 1126, 1795
NheI GCTAGC 1 cut(s) 1442
NlaIV GGNNCC 2 cut(s) 250, 2151
NmuCI GTSAC 4 cut(s) 166, 264, 931, 1254
NspI RCATGY 2 cut(s) 1712, 1954
PagI TCATGA 3 cut(s) 1009, 1021, 1864
PaqCI CACCTGC 1 cut(s) 1504
PceI AGGCCT 1 cut(s) 1612
PciI ACATGT 2 cut(s) 1708, 1950
PciSI GCTCTTC 1 cut(s) 1512
PctI GAATGC 1 cut(s) 702
PdmI GAANNNNTTC 1 cut(s) 1318
PfeI GAWTC 3 cut(s) 724, 1112, 1702
PflMI CCANNNNNTGG 2 cut(s) 364, 894
PkrI GCNGC 4 cut(s) 1453, 1600, 1804, 1822
Ple19I CGATCG 1 cut(s) 69
PleI GAGTC 7 cut(s) 358, 790, 977, 1033, 1169, 1398, 1430
PpsI GAGTC 7 cut(s) 358, 790, 977, 1033, 1169, 1398, 1430
Ppu21I YACGTR 1 cut(s) 1424
PpuMI RGGWCCY 1 cut(s) 2149
PscI ACATGT 2 cut(s) 1708, 1950
Psp5II RGGWCCY 1 cut(s) 2149
Psp6I CCWGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
PspGI CCWGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
PspN4I GGNNCC 2 cut(s) 250, 2151
PspPI GGNCC 4 cut(s) 1298, 1376, 2118, 2149
PspPPI RGGWCCY 1 cut(s) 2149
PsrI GAACNNNNNNTAC 2 cut(s) 1873, 1905
PstI CTGCAG 1 cut(s) 808
PstNI CAGNNNCTG 1 cut(s) 1973
PsuI RGATCY 1 cut(s) 1126
PvuI CGATCG 1 cut(s) 69
RsaI GTAC 9 cut(s) 438, 510, 562, 1309, 1397, 1573, 1587, 1891, 1923
RsaNI GTAC 9 cut(s) 437, 509, 561, 1308, 1396, 1572, 1586, 1890, 1922
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 5 cut(s) 536, 632, 2072, 2085, 2160
SatI GCNGC 4 cut(s) 1452, 1599, 1803, 1821
Sau3AI GATC 4 cut(s) 66, 489, 1126, 1795
Sau96I GGNCC 4 cut(s) 1298, 1376, 2118, 2149
ScaI AGTACT 3 cut(s) 1397, 1587, 1891
SchI GAGTC 7 cut(s) 359, 791, 978, 1034, 1169, 1399, 1430
ScrFI CCNGG 6 cut(s) 246, 378, 1109, 1305, 1644, 2104
SduI GDGCHC 2 cut(s) 1342, 1734
SexAI ACCWGGT 1 cut(s) 1303
SfaNI GCATC 7 cut(s) 488, 713, 797, 1045, 1336, 1474, 1985
SfcI CTRYAG 3 cut(s) 804, 1134, 1155
SinI GGWCC 3 cut(s) 1298, 1376, 2149
SmlI CTYRAG 1 cut(s) 1697
SmoI CTYRAG 1 cut(s) 1697
SseBI AGGCCT 1 cut(s) 1612
SsiI CCGC 1 cut(s) 1072
SspMI CTAG 7 cut(s) 333, 929, 1064, 1443, 1799, 1854, 1887
StuI AGGCCT 1 cut(s) 1612
StyD4I CCNGG 6 cut(s) 244, 376, 1107, 1303, 1642, 2102
StyI CCWWGG 3 cut(s) 222, 358, 465
TaaI ACNGT 7 cut(s) 444, 520, 590, 626, 1138, 1736, 1913
TaiI ACGT 4 cut(s) 778, 884, 1261, 1426
TaqI TCGA 7 cut(s) 38, 65, 69, 177, 772, 967, 1330
TatI WGTACW 4 cut(s) 1395, 1571, 1585, 1889
TfiI GAWTC 3 cut(s) 724, 1112, 1702
Tru1I TTAA 5 cut(s) 536, 632, 2072, 2085, 2160
Tru9I TTAA 5 cut(s) 536, 632, 2072, 2085, 2160
TscAI CASTG 6 cut(s) 808, 948, 1143, 1551, 1739, 2128
TseFI GTSAC 4 cut(s) 166, 264, 931, 1254
TseI GCWGC 4 cut(s) 1451, 1598, 1802, 1820
Tsp45I GTSAC 4 cut(s) 166, 264, 931, 1254
TspGWI ACGGA 2 cut(s) 496, 2201
TspRI CASTG 6 cut(s) 808, 948, 1143, 1551, 1739, 2128
Van91I CCANNNNNTGG 2 cut(s) 364, 894
VpaK11BI GGWCC 3 cut(s) 1298, 1376, 2149
XapI RAATTY 2 cut(s) 815, 1552
XbaI TCTAGA 1 cut(s) 1853
XceI RCATGY 2 cut(s) 1712, 1954
XcmI CCANNNNNNNNNTGG 1 cut(s) 1915
XmnI GAANNNNTTC 1 cut(s) 1318
XspI CTAG 7 cut(s) 333, 929, 1064, 1443, 1799, 1854, 1887
ZrmI AGTACT 3 cut(s) 1397, 1587, 1891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.