Prupe.4G056600_v2.0.a1

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
2710461 .. 2713981
3521 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G056600.2

Sequence Viewer

Length: 2751 bp
ATGTCTCTTTCTCTTGCCGCATCTAATACTGTCCAGGGGCTCCGGCTTTTGTTTCCTGCGCTCATCATCTACTTTCTAATCATTCTCTCGTATGGAGTTGGAGCTCAAAACAGTAGCAATGTCACCAACGTTGGAGCAATCATTAACGGTAATTCTCGTATTGGGAAAGAACAGAAAACTGCCATGGAAATTGCAGCTGAAACCTTCAACAACCGTTCGAAGACTCATAAGCTCATCCTTCATTTTCGAAACTCCAGCACAGATCCCTTTCTTGCTGCTTCTGCTGCTGAAGAGTTGATAAAGGAAAAGAAAGTAGAAGCCATAGTTGGCATGGAGACTTGGCAGGAAGCAGCTCAGGTAGCTGATCTTGTGGGAAACCTAGCTCAAATTCCAGTGATCTCATTTGCAGCACCCTCTATAACCCCGCCACTAATGCAAAGCCGTTGGCCATTTTTGATACGAATGGCAGCTGACGGTTCTGCTCAAATGAAATGCATTGCAGATATTGTTTCTGCCTACCATTGGAAAAGGGTGGTTGTGATATACGAAGATGATGGGTATGGCGGTGATGTTGGGATGCTAGCTCTTTTATCTGAGGCTCTTCAAGATGTTGGTTCAAAGATTGAGCACCGTTTGGTTCTTCCACAAGTTTCGTCTCTGTCTAATCCGAATTGGGTTGAGCTGGAAGAGCTGTTGAAGCTTCCCACCATGCAGTCTCGGGTATATATTGTGTTCCAGTCATCTTTACCAACAGTGGCTCATCTATTCAGAGTGGCTGAGAAGATGGGACTTGTAGGAAAAGAATCAGCTTGGATAATCACAGAGAGTATCACTAGTTTGTTTGACCCTCATGAAACCTCTGATATATCATCCACCATGAAAGGCACTCTGGGAATCAAGACCTACTATGCCAAAAATACTAATTCTTTTGCCACGTTCCAGAAGCAATTCCAAACAAAGTATCCAGAAGAAGGCAGCCCCGAGCCAGGAATTTACGCTCTTCGAGCATACGATGCTATTAGAATCATTGCACAGGCCATAGGAAGAATGACTAGTAATAACTCTACTAGTCTTCAGCTGTTGTTAAATACATTATTTAGCAATTATACCGGTTTAAGTGGGAAAATGCGGTTCGAAGCAGGTGAGATATTGTACTCTCCGGTACTCAGGATCATAAATATTGTGGATGGGAAGAGATTCAAAGAACTCAACTTTTGGACACCAGATGTTGGTTTCTCATTAGAAGAAACAGGCAAGATCAGAGATGGTGATGCTGGTGGAGTAATTTGGCCCGGTAACCTCACGCATGTCCCCAAAGGCTGGGCAATGCCTACTGCTGCGAAGCCAATGAAAATTGGGGTACCTGGTAAAACATCCTTCAGCAAATTTGTAAAGGTTGATCCGTCCCTGGAAAATTCAGATAAGAAGAAATATGTCGGTTTCTGCATTGCAATTTTCGATATGGTGATAGAGAGATTGAATTATTCATTGCCATATGAATTTGAAGCCTTTGATGGCCTCTATGATGATCTGGTAGAACGAGTCCATAACAAGGTTTATGACGCTGCGGTTGGCGATATAACAGTACTAGCTGACCGACTGGAGAAAGTGGAGTTCACTCAGCCATACATGGAGTCTGGTTTGTCCATGATAGTTCCAGCAAAACCTGAGAAGTCAACATGGATGTTCATGAAACCTTTCACATGGCAAATGTGGGTGGTGAGTGGGGCCATTTTAATCTACACAATGTTTGTAGTATGGTTCCTGGAGCGCCCATCCAATCCAGAATTTGGTGGCCCATTGAAGAACCAGATTGGCACAGCAACTTGGTTTACCTTCTCCTCTCTGTTCTTTTCTCACAGAGAGAAAATTTACAGCAACTTAACTCGACTGGTTGTTGTGGTGTGGCTCTTTGTTGTATTGATCCTAACCTCAAGCTACACTGCTAATCTGTCTTCCATGCTTACCATCCAACGGCTTAAACCAAATGTGACAGATATCGAAATTCTGAAGAGAACCAACTCGAAAATTGGTTGCGATGGGGACTCGTTTGTCATGGACTACCTGCAGACTGTTCTTGGGTTCAAAATAGAGAACATCGTCAAAGTAAGCAGCGAATACAACTACACGAAAGAATTCAAAAGCAAAAACATATCTGCTGCCTTTCTTGAACTCCCATATGCCCAAGTGTTCATGAACGAGTTCTGTGAGGGATATACATCCACGGAGCCTACGTACAGATTTGGAGGCTTGAGCTTTATATTCCAAAGAGGCTCTCCGATAGCCAGGGATTTCACCAAGGCAATTCTAGAGCTATTGGAGAATGGAGAGCTGAAGAAACTTCAAAATGACTGGTTGACCCCCAATGAGTGTCCAAACAATGTAACTTCCAATGGACCAGAAAGCTTGAGCCTCAACAGTTTTACAGCCCTCTATGTGATATCTGGTGTTACCTCCTCCTTTTGTTTTCTACTATCTCTTGCTGTCTTGGGGAGGAGGTTTCTGCAGCAAGAAGCAGACCAAGGCAATGCAAGCCCAAGTCCAAGTGACGAAACTCTTTGGAACAAGACAGTTAGAATAGCAAGATTCTTCTACAGCAGAGAGCTTAATATCCCAACCAGAGCTCCAACTTTTGCTGATTATGCAGAAGAATGGCATTCTCCAATGTGGGATTACTCCACTGCTTCAAATACTCCTGAGCATCCTAGGACCATAAGGCCAACAGAAATCGAATGCGTTCAACAGGGATAA

Protein Analysis

917

Amino Acids

102.59

Weight (kDa)

5.94

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1130
AasI GACNNNNNNGTC 1 cut(s) 2051
Acc36I ACCTGC 2 cut(s) 1130, 2073
Acc65I GGTACC 1 cut(s) 1360
AccB1I GGYRCC 1 cut(s) 1360
AccB7I CCANNNNNTGG 3 cut(s) 1229, 1320, 1790
AciI CCGC 5 cut(s) 18, 425, 564, 1129, 1568
AclI AACGTT 1 cut(s) 129
AclWI GGATC 4 cut(s) 257, 1178, 1394, 1918
AcoI YGGCCR 1 cut(s) 446
AcsI RAATTY 9 cut(s) 387, 990, 1385, 1414, 1499, 1787, 1869, 2004, 2135
AcuI CTGAAG 5 cut(s) 309, 1058, 1363, 2030, 2354
AfaI GTAC 5 cut(s) 1154, 1164, 1362, 1587, 2237
AfiI CCNNNNNNNGG 8 cut(s) 522, 971, 986, 1229, 1320, 1552, 1790, 1974
AgeI ACCGGT 1 cut(s) 1109
AhlI ACTAGT 3 cut(s) 833, 1052, 1067
AjnI CCWGG 6 cut(s) 33, 985, 1363, 1407, 1764, 2285
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
Alw21I GWGCWC 3 cut(s) 106, 630, 2626
Alw26I GTCTC 4 cut(s) 9, 329, 660, 720
AlwI GGATC 4 cut(s) 257, 1178, 1394, 1918
Ama87I CYCGRG 2 cut(s) 717, 980
AoxI GGCC 7 cut(s) 446, 1035, 1289, 1516, 1728, 1795, 2717
ApoI RAATTY 9 cut(s) 387, 990, 1385, 1414, 1499, 1787, 1869, 2004, 2135
AsiGI ACCGGT 1 cut(s) 1109
Asp700I GAANNNNTTC 6 cut(s) 947, 1196, 1697, 2135, 2201, 2736
Asp718I GGTACC 1 cut(s) 1360
AspA2I CCTAGG 1 cut(s) 2705
AspLEI GCGC 2 cut(s) 61, 1773
AspS9I GGNCC 5 cut(s) 1290, 1728, 1796, 2396, 2709
AsuC2I CCSGG 1 cut(s) 1293
AsuHPI GGTGA 7 cut(s) 115, 578, 1154, 1280, 1477, 1732, 2287
AsuII TTCGAA 3 cut(s) 218, 247, 1134
AsuNHI GCTAGC 1 cut(s) 580
AvaI CYCGRG 2 cut(s) 717, 980
AvaII GGWCC 2 cut(s) 2396, 2709
AvrII CCTAGG 1 cut(s) 2705
BalI TGGCCA 1 cut(s) 448
BanI GGYRCC 1 cut(s) 1360
BanII GRGCYC 3 cut(s) 42, 106, 2626
BbsI GAAGAC 3 cut(s) 227, 1064, 1947
Bbv12I GWGCWC 3 cut(s) 106, 630, 2626
BccI CCATC 8 cut(s) 548, 778, 1181, 1259, 1508, 1783, 1976, 2033
BceAI ACGGC 2 cut(s) 426, 1991
BciT130I CCWGG 6 cut(s) 35, 987, 1365, 1409, 1766, 2287
BciVI GTATCC 1 cut(s) 972
BcnI CCSGG 1 cut(s) 1293
BcoDI GTCTC 4 cut(s) 9, 329, 660, 720
BcuI ACTAGT 3 cut(s) 833, 1052, 1067
BfaI CTAG 8 cut(s) 380, 581, 834, 1053, 1068, 1589, 2309, 2706
BfmI CTRYAG 3 cut(s) 2066, 2504, 2593
BfoI RGCGCY 1 cut(s) 1774
BfuAI ACCTGC 2 cut(s) 1130, 2073
BfuI GTATCC 1 cut(s) 972
BlnI CCTAGG 1 cut(s) 2705
BmcAI AGTACT 1 cut(s) 1587
Bme1390I CCNGG 7 cut(s) 35, 987, 1293, 1365, 1409, 1766, 2287
Bme18I GGWCC 2 cut(s) 2396, 2709
BmeT110I CYCGRG 2 cut(s) 717, 980
BmgT120I GGNCC 5 cut(s) 1290, 1728, 1796, 2396, 2709
BmiI GGNNCC 5 cut(s) 41, 1362, 1729, 1763, 2229
BmrFI CCNGG 7 cut(s) 35, 987, 1293, 1365, 1409, 1766, 2287
BmsI GCATC 5 cut(s) 29, 567, 1003, 1261, 2710
BmtI GCTAGC 1 cut(s) 584
BpiI GAAGAC 3 cut(s) 227, 1064, 1947
BpmI CTGGAG 3 cut(s) 238, 1622, 1787
Bpu10I CCTNAGC 2 cut(s) 354, 2697
Bpu14I TTCGAA 3 cut(s) 218, 247, 1134
BpuEI CTTGAG 3 cut(s) 1918, 2272, 2428
BpuMI CCSGG 1 cut(s) 1293
BsaAI YACGTR 1 cut(s) 2235
BsaBI GATNNNNATC 1 cut(s) 2218
BsaJI CCNNGG 8 cut(s) 34, 183, 1407, 2223, 2286, 2298, 2521, 2705
BsaWI WCCGGW 2 cut(s) 1109, 1159
BsaXI ACNNNNNCTCC 4 cut(s) 2219, 2249, 2608, 2638
Bsc4I CCNNNNNNNGG 8 cut(s) 522, 971, 986, 1229, 1320, 1552, 1790, 1974
Bse118I RCCGGY 1 cut(s) 1109
Bse1I ACTGG 5 cut(s) 392, 736, 1605, 1896, 2357
Bse3DI GCAATG 7 cut(s) 124, 495, 1026, 1332, 1446, 1487, 2533
Bse8I GATNNNNATC 1 cut(s) 2218
BseBI CCWGG 6 cut(s) 35, 987, 1365, 1409, 1766, 2287
BseDI CCNNGG 8 cut(s) 34, 183, 1407, 2223, 2286, 2298, 2521, 2705
BseJI GATNNNNATC 1 cut(s) 2218
BseLI CCNNNNNNNGG 8 cut(s) 522, 971, 986, 1229, 1320, 1552, 1790, 1974
BseMI GCAATG 7 cut(s) 124, 495, 1026, 1332, 1446, 1487, 2533
BseMII CTCAG 7 cut(s) 368, 585, 768, 1180, 1634, 1659, 2688
BseNI ACTGG 5 cut(s) 392, 736, 1605, 1896, 2357
BseRI GAGGAG 3 cut(s) 1831, 2446, 2509
BseYI CCCAGC 1 cut(s) 1320
BshFI GGCC 7 cut(s) 448, 1037, 1291, 1518, 1730, 1797, 2719
BshNI GGYRCC 1 cut(s) 1360
BshTI ACCGGT 1 cut(s) 1109
BsiHKAI GWGCWC 3 cut(s) 106, 630, 2626
BsiHKCI CYCGRG 2 cut(s) 717, 980
BsiSI CCGG 4 cut(s) 43, 1110, 1160, 1293
BslFI GGGAC 4 cut(s) 801, 1295, 1390, 2057
BslI CCNNNNNNNGG 8 cut(s) 522, 971, 986, 1229, 1320, 1552, 1790, 1974
BsmAI GTCTC 4 cut(s) 9, 329, 660, 720
BsmBI CGTCTC 1 cut(s) 660
BsmFI GGGAC 4 cut(s) 801, 1295, 1390, 2057
BsmI GAATGC 2 cut(s) 2656, 2738
BsnI GGCC 7 cut(s) 448, 1037, 1291, 1518, 1730, 1797, 2719
BsoBI CYCGRG 2 cut(s) 717, 980
Bsp119I TTCGAA 3 cut(s) 218, 247, 1134
Bsp1286I GDGCHC 4 cut(s) 42, 106, 630, 2626
Bsp143I GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
Bsp19I CCATGG 1 cut(s) 183
BspACI CCGC 5 cut(s) 18, 425, 564, 1129, 1568
BspANI GGCC 7 cut(s) 448, 1037, 1291, 1518, 1730, 1797, 2719
BspCNI CTCAG 7 cut(s) 367, 586, 769, 1179, 1633, 1660, 2689
BspHI TCATGA 3 cut(s) 850, 1689, 2193
BspLI GGNNCC 5 cut(s) 41, 1362, 1729, 1763, 2229
BspMAI CTGCAG 2 cut(s) 2070, 2508
BspMI ACCTGC 2 cut(s) 1130, 2073
BspOI GCTAGC 1 cut(s) 584
BspPI GGATC 4 cut(s) 257, 1178, 1394, 1918
BspQI GCTCTTC 3 cut(s) 606, 681, 1005
BspT104I TTCGAA 3 cut(s) 218, 247, 1134
BspT107I GGYRCC 1 cut(s) 1360
BsrDI GCAATG 7 cut(s) 124, 495, 1026, 1332, 1446, 1487, 2533
BsrFI RCCGGY 1 cut(s) 1109
BsrI ACTGG 5 cut(s) 392, 736, 1605, 1896, 2357
BssAI RCCGGY 1 cut(s) 1109
BssECI CCNNGG 8 cut(s) 34, 183, 1407, 2223, 2286, 2298, 2521, 2705
BssMI GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
BssT1I CCWWGG 4 cut(s) 183, 2298, 2521, 2705
Bst2UI CCWGG 6 cut(s) 35, 987, 1365, 1409, 1766, 2287
Bst6I CTCTTC 6 cut(s) 285, 606, 681, 1005, 1187, 2006
BstAPI GCANNNNNTGC 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 2235
BstBI TTCGAA 3 cut(s) 218, 247, 1134
BstC8I GCNNGC 2 cut(s) 582, 2533
BstDEI CTNAG 7 cut(s) 354, 594, 777, 1166, 1620, 1668, 2697
BstDSI CCRYGG 2 cut(s) 183, 2223
BstEII GGTNACC 1 cut(s) 1295
BstH2I RGCGCY 1 cut(s) 1774
BstHHI GCGC 2 cut(s) 61, 1773
BstKTI GATC 8 cut(s) 265, 367, 399, 1173, 1260, 1402, 1531, 1926
BstMAI GTCTC 4 cut(s) 9, 329, 660, 720
BstMBI GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
BstNI CCWGG 6 cut(s) 35, 987, 1365, 1409, 1766, 2287
BstNSI RCATGY 1 cut(s) 1310
BstPI GGTNACC 1 cut(s) 1295
BstSCI CCNGG 7 cut(s) 33, 985, 1291, 1363, 1407, 1764, 2285
BstSFI CTRYAG 3 cut(s) 2066, 2504, 2593
BstSNI TACGTA 1 cut(s) 2235
BstV2I GAAGAC 3 cut(s) 227, 1064, 1947
BstX2I RGATCY 1 cut(s) 262
BstYI RGATCY 1 cut(s) 262
BsuI GTATCC 1 cut(s) 972
BsuRI GGCC 7 cut(s) 448, 1037, 1291, 1518, 1730, 1797, 2719
BtgI CCRYGG 2 cut(s) 183, 2223
BtgZI GCGATG 1 cut(s) 2052
BtsI GCAGTG 2 cut(s) 1941, 2679
BtsIMutI CAGTG 4 cut(s) 399, 759, 1941, 2679
BveI ACCTGC 2 cut(s) 1130, 2073
Cac8I GCNNGC 2 cut(s) 582, 2533
CciI TCATGA 3 cut(s) 850, 1689, 2193
CfoI GCGC 2 cut(s) 61, 1773
Cfr10I RCCGGY 1 cut(s) 1109
Cfr13I GGNCC 5 cut(s) 1290, 1728, 1796, 2396, 2709
CseI GACGC 1 cut(s) 1571
CsiI ACCWGGT 1 cut(s) 1363
Csp6I GTAC 5 cut(s) 1153, 1163, 1361, 1586, 2236
CspAI ACCGGT 1 cut(s) 1109
CviQI GTAC 5 cut(s) 1153, 1163, 1361, 1586, 2236
DdeI CTNAG 7 cut(s) 354, 594, 777, 1166, 1620, 1668, 2697
DpnI GATC 8 cut(s) 264, 366, 398, 1172, 1259, 1401, 1530, 1925
DpnII GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
DrdI GACNNNNNNGTC 1 cut(s) 2051
DseDI GACNNNNNNGTC 1 cut(s) 2051
EaeI YGGCCR 1 cut(s) 446
Eam1104I CTCTTC 6 cut(s) 285, 606, 681, 1005, 1187, 2006
EarI CTCTTC 6 cut(s) 285, 606, 681, 1005, 1187, 2006
Ecl136II GAGCTC 2 cut(s) 104, 2624
Eco105I TACGTA 1 cut(s) 2235
Eco130I CCWWGG 4 cut(s) 183, 2298, 2521, 2705
Eco24I GRGCYC 3 cut(s) 42, 106, 2626
Eco32I GATATC 2 cut(s) 1999, 2442
Eco47I GGWCC 2 cut(s) 2396, 2709
Eco53kI GAGCTC 2 cut(s) 104, 2624
Eco57I CTGAAG 5 cut(s) 309, 1058, 1363, 2030, 2354
Eco88I CYCGRG 2 cut(s) 717, 980
Eco91I GGTNACC 1 cut(s) 1295
EcoICRI GAGCTC 2 cut(s) 104, 2624
EcoO65I GGTNACC 1 cut(s) 1295
EcoRI GAATTC 1 cut(s) 2135
EcoRII CCWGG 6 cut(s) 33, 985, 1363, 1407, 1764, 2285
EcoRV GATATC 2 cut(s) 1999, 2442
EcoT14I CCWWGG 4 cut(s) 183, 2298, 2521, 2705
EcoT22I ATGCAT 1 cut(s) 497
EcoT38I GRGCYC 3 cut(s) 42, 106, 2626
ErhI CCWWGG 4 cut(s) 183, 2298, 2521, 2705
Esp3I CGTCTC 1 cut(s) 660
FaqI GGGAC 4 cut(s) 801, 1295, 1390, 2057
FauI CCCGC 1 cut(s) 432
FauNDI CATATG 2 cut(s) 1495, 2179
FriOI GRGCYC 3 cut(s) 42, 106, 2626
FspBI CTAG 8 cut(s) 380, 581, 834, 1053, 1068, 1589, 2309, 2706
GlaI GCGC 2 cut(s) 60, 1772
GsaI CCCAGC 1 cut(s) 1324
GsuI CTGGAG 3 cut(s) 238, 1622, 1787
HaeII RGCGCY 1 cut(s) 1774
HaeIII GGCC 7 cut(s) 448, 1037, 1291, 1518, 1730, 1797, 2719
HapII CCGG 4 cut(s) 43, 1110, 1160, 1293
HgaI GACGC 1 cut(s) 1571
HhaI GCGC 2 cut(s) 61, 1773
Hin6I GCGC 2 cut(s) 59, 1771
HinP1I GCGC 2 cut(s) 59, 1771
HincII GTYRAC 2 cut(s) 1677, 2358
HindII GTYRAC 2 cut(s) 1677, 2358
HindIII AAGCTT 2 cut(s) 698, 2404
HinfI GANTC 9 cut(s) 223, 803, 894, 1023, 1197, 1542, 1634, 2045, 2586
HpaII CCGG 4 cut(s) 43, 1110, 1160, 1293
HphI GGTGA 7 cut(s) 115, 578, 1154, 1280, 1477, 1732, 2287
Hpy166II GTNNAC 4 cut(s) 1617, 1677, 1833, 2358
Hpy188I TCNGA 8 cut(s) 595, 669, 770, 862, 1262, 1420, 2010, 2280
Hpy8I GTNNAC 4 cut(s) 1617, 1677, 1833, 2358
HpyAV CCTTC 5 cut(s) 214, 248, 965, 1387, 1846
HpyCH4IV ACGT 3 cut(s) 129, 935, 2234
HpyF3I CTNAG 7 cut(s) 354, 594, 777, 1166, 1620, 1668, 2697
HpySE526I ACGT 3 cut(s) 129, 935, 2234
HspAI GCGC 2 cut(s) 59, 1771
KpnI GGTACC 1 cut(s) 1364
Kzo9I GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
LguI GCTCTTC 3 cut(s) 606, 681, 1005
LmnI GCTCC 6 cut(s) 45, 101, 134, 1768, 2227, 2629
LweI GCATC 5 cut(s) 29, 567, 1003, 1261, 2710
MabI ACCWGGT 1 cut(s) 1363
MaeI CTAG 8 cut(s) 380, 581, 834, 1053, 1068, 1589, 2309, 2706
MaeII ACGT 3 cut(s) 129, 935, 2234
MaeIII GTNAC 6 cut(s) 121, 1295, 1990, 2383, 2449, 2546
MalI GATC 8 cut(s) 264, 366, 398, 1172, 1259, 1401, 1530, 1925
MboI GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
MflI RGATCY 1 cut(s) 262
MhlI GDGCHC 4 cut(s) 42, 106, 630, 2626
MlsI TGGCCA 1 cut(s) 448
MluNI TGGCCA 1 cut(s) 448
MlyI GAGTC 4 cut(s) 217, 1551, 1643, 2039
MmeI TCCRAC 4 cut(s) 79, 112, 1996, 2651
Mox20I TGGCCA 1 cut(s) 448
Mph1103I ATGCAT 1 cut(s) 497
MroXI GAANNNNTTC 6 cut(s) 947, 1196, 1697, 2135, 2201, 2736
MscI TGGCCA 1 cut(s) 448
MseI TTAA 7 cut(s) 144, 1085, 1115, 1736, 1883, 1980, 2607
Msp20I TGGCCA 1 cut(s) 448
MspA1I CMGCKG 3 cut(s) 197, 470, 1078
MspI CCGG 4 cut(s) 43, 1110, 1160, 1293
MspR9I CCNGG 7 cut(s) 35, 987, 1293, 1365, 1409, 1766, 2287
Mva1269I GAATGC 2 cut(s) 2656, 2738
MvaI CCWGG 6 cut(s) 35, 987, 1365, 1409, 1766, 2287
NciI CCSGG 1 cut(s) 1293
NcoI CCATGG 1 cut(s) 183
NdeI CATATG 2 cut(s) 1495, 2179
NdeII GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
NheI GCTAGC 1 cut(s) 580
NlaIV GGNNCC 5 cut(s) 41, 1362, 1729, 1763, 2229
NmuCI GTSAC 3 cut(s) 121, 1990, 2546
NsiI ATGCAT 1 cut(s) 497
NspI RCATGY 1 cut(s) 1310
NspV TTCGAA 3 cut(s) 218, 247, 1134
PagI TCATGA 3 cut(s) 850, 1689, 2193
PaqCI CACCTGC 1 cut(s) 1130
PciSI GCTCTTC 3 cut(s) 606, 681, 1005
PcsI WCGNNNNNNNCGW 1 cut(s) 2231
PctI GAATGC 2 cut(s) 2656, 2738
PdmI GAANNNNTTC 6 cut(s) 947, 1196, 1697, 2135, 2201, 2736
PfeI GAWTC 5 cut(s) 803, 894, 1023, 1197, 2586
PflMI CCANNNNNTGG 3 cut(s) 1229, 1320, 1790
PfoI TCCNGGA 1 cut(s) 1764
PinAI ACCGGT 1 cut(s) 1109
PleI GAGTC 4 cut(s) 217, 1550, 1642, 2039
PpsI GAGTC 4 cut(s) 217, 1550, 1642, 2039
Ppu21I YACGTR 1 cut(s) 2235
Psp124BI GAGCTC 2 cut(s) 106, 2626
Psp1406I AACGTT 1 cut(s) 129
Psp6I CCWGG 6 cut(s) 33, 985, 1363, 1407, 1764, 2285
PspEI GGTNACC 1 cut(s) 1295
PspFI CCCAGC 1 cut(s) 1320
PspGI CCWGG 6 cut(s) 33, 985, 1363, 1407, 1764, 2285
PspN4I GGNNCC 5 cut(s) 41, 1362, 1729, 1763, 2229
PspPI GGNCC 5 cut(s) 1290, 1728, 1796, 2396, 2709
PstI CTGCAG 2 cut(s) 2070, 2508
PsuI RGATCY 1 cut(s) 262
PvuII CAGCTG 3 cut(s) 197, 470, 1078
RsaI GTAC 5 cut(s) 1154, 1164, 1362, 1587, 2237
RsaNI GTAC 5 cut(s) 1153, 1163, 1361, 1586, 2236
SacI GAGCTC 2 cut(s) 106, 2626
SapI GCTCTTC 3 cut(s) 606, 681, 1005
SaqAI TTAA 7 cut(s) 144, 1085, 1115, 1736, 1883, 1980, 2607
Sau3AI GATC 8 cut(s) 262, 364, 396, 1170, 1257, 1399, 1528, 1923
Sau96I GGNCC 5 cut(s) 1290, 1728, 1796, 2396, 2709
ScaI AGTACT 1 cut(s) 1587
SchI GAGTC 4 cut(s) 217, 1551, 1643, 2039
ScrFI CCNGG 7 cut(s) 35, 987, 1293, 1365, 1409, 1766, 2287
SduI GDGCHC 4 cut(s) 42, 106, 630, 2626
SexAI ACCWGGT 1 cut(s) 1363
SfaNI GCATC 5 cut(s) 29, 567, 1003, 1261, 2710
SfcI CTRYAG 3 cut(s) 2066, 2504, 2593
SfuI TTCGAA 3 cut(s) 218, 247, 1134
SinI GGWCC 2 cut(s) 2396, 2709
SmlI CTYRAG 3 cut(s) 1933, 2251, 2407
SmoI CTYRAG 3 cut(s) 1933, 2251, 2407
SnaBI TACGTA 1 cut(s) 2235
SpeI ACTAGT 3 cut(s) 833, 1052, 1067
SsiI CCGC 5 cut(s) 18, 425, 564, 1129, 1568
SspI AATATT 1 cut(s) 1180
SspMI CTAG 8 cut(s) 380, 581, 834, 1053, 1068, 1589, 2309, 2706
SstI GAGCTC 2 cut(s) 106, 2626
StyD4I CCNGG 7 cut(s) 33, 985, 1291, 1363, 1407, 1764, 2285
StyI CCWWGG 4 cut(s) 183, 2298, 2521, 2705
TaiI ACGT 3 cut(s) 132, 938, 2237
TaqI TCGA 9 cut(s) 218, 247, 1003, 1134, 1458, 1888, 2001, 2024, 2730
TaqII GACCGA 1 cut(s) 1611
TatI WGTACW 2 cut(s) 1152, 1585
TauI GCSGC 1 cut(s) 20
TfiI GAWTC 5 cut(s) 803, 894, 1023, 1197, 2586
Tru1I TTAA 7 cut(s) 144, 1085, 1115, 1736, 1883, 1980, 2607
Tru9I TTAA 7 cut(s) 144, 1085, 1115, 1736, 1883, 1980, 2607
TscAI CASTG 4 cut(s) 399, 759, 1948, 2686
TseFI GTSAC 3 cut(s) 121, 1990, 2546
Tsp45I GTSAC 3 cut(s) 121, 1990, 2546
TspGWI ACGGA 2 cut(s) 1392, 2240
TspRI CASTG 4 cut(s) 399, 759, 1948, 2686
Van91I CCANNNNNTGG 3 cut(s) 1229, 1320, 1790
VpaK11BI GGWCC 2 cut(s) 2396, 2709
XapI RAATTY 9 cut(s) 387, 990, 1385, 1414, 1499, 1787, 1869, 2004, 2135
XbaI TCTAGA 1 cut(s) 2308
XceI RCATGY 1 cut(s) 1310
XcmI CCANNNNNNNNNTGG 1 cut(s) 328
XmaJI CCTAGG 1 cut(s) 2705
XmnI GAANNNNTTC 6 cut(s) 947, 1196, 1697, 2135, 2201, 2736
XspI CTAG 8 cut(s) 380, 581, 834, 1053, 1068, 1589, 2309, 2706
ZrmI AGTACT 1 cut(s) 1587
Zsp2I ATGCAT 1 cut(s) 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.