Rh5AG079100

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
6781716 .. 6785144
3429 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG079100.1

Sequence Viewer

Length: 2715 bp
ATGGCTTTTCCTTGTAAGTTGACCTTTAACAAAATCGAAAGACTTTGGCATCTGCTTCCTCTGCTCATCATAATCATCATTATCACTGTCTCTGATAGAGCTGAAGCTGAAAATGAGAAAATTGTCACCAATCTTGGAGCAATCGTTAATCTGAATTCTCGTATGGGCAAAGAACAGAAAACTGCTATGGATATTGCAGCTGAAAACTTCAGCAACCTTTCAAAGACTCATAGCCTAATCATTCATTTTCGACATTCTGACGGAGATCCCTTTACAGCTGCTTCTGCTGCTGAAGAGTTGATAAAGGAGAAGAAAGTAAAAGTGCTAATTGGCATGGAGACTTGGCAGGAAGCAGTTCAAGTAGCTGATGTGGGGAACCGAGCTCAAGTTCCAGTGATTTCATTTGCAGCACCTACTATAACCCCACCTCTCATCCGACGCAAGTGGCCATTTTTGATAAGAGTGGCAAGCGATGTTGGTGCTCAGATCAAATGCATTGCAGATATAGTTTCTTTGTACAGTTGGAAAAGGGTAATTGCAATATACGAGGATGATGGTTATGGTGGTAATGCTGGGATGCTAGCTCTTTTATTTGAGTCACTCCAAGACGTTGGTTCAAAGATTGAGCATCATTTGGTTCTCCCACGGGTTTCTTCTATGTCTAATCCTGATTGGGGTGAACTAGAGGAGATGCTGAAGCTTCCCAGCTTTCAGTCTCGGGTCTTCATTGTTCTTCAGTCATCTTTACCAACAGTGACTAATCTGTTCAGGGTGGCGAAGAAGATGGGACTTGTAGGAAGAGACTCGGCTTGGATAATCACAGAGCGTATTAAGAGTTTACTTGACCCTCAAGTCAATCACGATATGGAAGGTACTCTGGGAATCAAGACCTACTATGCCAAAAATACCAGTTCCTATGTCAAGTTCAGCAAGGTATTTCGAAAAAAGTATCCAGAGAAAAATAACTCCGAGCCAGGAATATATGCTCTTCGAGCTTACGATCTAACTAGAATCGTAACTCAGGCCATAGGAATGACTGGTAACAGTACCACTAACCTTCAGGCAGTGTTGAATACAGTGTTAAGCAATTACATGGGTTTAAGCGGGAAAATGCGCTTCAAAGGAGGTGAAGTGTTGTACTCTCCAATATTCAGGATCATAAATGTTGTGGAAGGGAACAGGTACAAAGAGTTGGACTTTTGGAGACCAGAGAATGGATTCTCAGAAAGCCTTGCACAACAAACAAGCATAAACAGAACAGATGGTGTTGGTACAGTTGTTTGGCCCGGGAATCTAAGCCAACGAGCCCCCAAAGGCTGGGCAATGCCTACTGCTGATAAGCCAATGATAATAGGGGTTCCTAATGGTTCCTTCCCCGAATTTGTAAACGTTAGTTCGGATGGAAAGAGTGTTGACGGTTTCTGCATTGAGCTTTTCAAAACGGTGGTAACTTATTTGAATTATCCTCTGCCAGTCGAATTCCGATACGTTAATTGCCCCTATGATGATTTGGTGGAACTAGTCCATAACAAGACTTTCGATGCCGGTGTTGGTGATATCACCATAATAGCAGAGCGAGTGGACAAAGTGGAGTTCACTCAGCCATATACCGAGTCTAGTTTGTCAATAATAGTTCCAGAAAAAGCTGAGCAATTAGAGTGGATGTTTATGAAACCTTTCACCGGGAAAATGTGGGCGGCAACTGGTGGCATATTAGTCTACACAATCTTGATTATATGGTTTTTGGAGCGCCTTGCTAATCCAGAATTCAGTGGCCCAGTGATGAATCAGATTGGCACAGCAACTTGGTTCGCCTTCACCTCTTTGTTCTTTTCTCACAGAGAGAAAATCTATAACAACTTAACTCGAGTAGTTGTTGTAATGTGGTTATTTGTTGTATTGATCCTAACCTCAAGCTACACCGCTAATCTATCATCAATGCTCACCATTCAACGATTGAAACCAAATGTAACGGACATCGAAATGCTAATAAGAACTAACTCAACAGTTGGCTCGAATAGGGATTCATTTGTCGTCAATTACTTGAAGAATGTTGGCTTCAATCGAGAGAACATCATCAAAACAGACAGGGAATCCAACTTCATTGAGGAGTTCGAAAGTAAACGTATATCTGCTGCCTTGCTTGAACTCCCATATGCGAAAGTATTCATGAACAAGTACTGCAAGGGATATACTGCGACCACACTACCCTTCTATAGATTCGGGGGACTAGCATTTATATTTCAGAAGGACTCTCCAATTGCCCGGGATTTCACCAAGGTCATTCTAGAGTTATTGGAGCAGGGAAAAATGATGTCACTTGAAGATGCTTGGTTGACACCGAAAAGTGAGTGTCGAAACAATGCAACTTCCAATGGACCCGAAAGTTTGAACGTCAAGAATTTTATGGGCCTTTATGTAATATTTGGTGTTACTTCCACCATTTGCCTTCTATTATCCTACGCTATCTTGCTGAAGAAACACGAGGATGCATACCCAGGCAATGCAAGTGGCGAAAGTGTTTTAAATAGGATAGTTAGAATAGCAAAATTCCTATATAATAGACAGATTCCAAGTAGAGCTCCAAGTTTTGCTGATGTGCCGGAATTGAGTACTTCTTCCGAGCTGGAATGCGTGACCACTTCTGCCACTTGGGAGCATCATCCTCACACCTCCATTCCAGCACAAACTGAAGGCACTCCACCACATGAATAA

Protein Analysis

904

Amino Acids

101.57

Weight (kDa)

7.92

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 60 - 389 5e-35 Receptor family ligand binding region
Peripla_BP_6 PF13458 87 - 357 1.4e-14 Periplasmic binding protein
SBP_bac_3 PF00497 456 - 780 2e-14 Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd PF10613 467 - 547 1.3e-06 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 563 - 811 1.7e-30 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 851
AccB7I CCANNNNNTGG 2 cut(s) 1214, 1317
AccI GTMKAC 1 cut(s) 1719
AciI CCGC 3 cut(s) 1104, 1697, 1923
AclI AACGTT 1 cut(s) 1389
AclWI GGATC 3 cut(s) 260, 1163, 1897
AcoI YGGCCR 1 cut(s) 446
AcsI RAATTY 6 cut(s) 154, 1379, 1478, 1766, 2401, 2549
AcuI CTGAAG 8 cut(s) 123, 193, 312, 716, 719, 1043, 2495, 2712
AfaI GTAC 8 cut(s) 518, 874, 1048, 1139, 1184, 1273, 2180, 2614
AfiI CCNNNNNNNGG 4 cut(s) 674, 1214, 1317, 1682
AhlI ACTAGT 1 cut(s) 1519
AjnI CCWGG 2 cut(s) 973, 2497
Alw21I GWGCWC 3 cut(s) 385, 484, 2584
Alw26I GTCTC 5 cut(s) 94, 332, 720, 795, 1198
AlwI GGATC 3 cut(s) 260, 1163, 1897
Ama87I CYCGRG 4 cut(s) 717, 1286, 1866, 2265
AoxI GGCC 5 cut(s) 446, 1023, 1283, 1774, 2410
ApeKI GCWGC 5 cut(s) 197, 278, 287, 407, 2135
ApoI RAATTY 6 cut(s) 154, 1379, 1478, 1766, 2401, 2549
Asp700I GAANNNNTTC 4 cut(s) 354, 1217, 1676, 2165
AspLEI GCGC 2 cut(s) 1116, 1752
AspS9I GGNCC 4 cut(s) 1284, 1775, 2378, 2410
AsuC2I CCSGG 5 cut(s) 1287, 1288, 1684, 2266, 2267
AsuHPI GGTGA 9 cut(s) 118, 689, 1139, 1552, 1565, 1672, 1810, 1936, 2266
AsuII TTCGAA 2 cut(s) 940, 2115
AsuNHI GCTAGC 1 cut(s) 580
AvaI CYCGRG 4 cut(s) 717, 1286, 1866, 2265
AvaII GGWCC 1 cut(s) 2378
BaeI ACNNNNGTAYC 2 cut(s) 1263, 1296
BalI TGGCCA 1 cut(s) 448
BanII GRGCYC 3 cut(s) 385, 1309, 2584
BauI CACGAG 1 cut(s) 2483
BbsI GAAGAC 1 cut(s) 715
Bbv12I GWGCWC 3 cut(s) 385, 484, 2584
BbvI GCAGC 5 cut(s) 209, 265, 274, 419, 2122
BccI CCATC 4 cut(s) 548, 778, 1256, 1394
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 2 cut(s) 975, 2499
BciVI GTATCC 1 cut(s) 960
BcnI CCSGG 5 cut(s) 1287, 1288, 1684, 2266, 2267
BcoDI GTCTC 5 cut(s) 94, 332, 720, 795, 1198
BcuI ACTAGT 1 cut(s) 1519
BfaI CTAG 7 cut(s) 581, 683, 1008, 1520, 1617, 2231, 2288
BfmI CTRYAG 1 cut(s) 2215
BfoI RGCGCY 1 cut(s) 1753
BfuI GTATCC 1 cut(s) 960
BisI GCNGC 6 cut(s) 198, 279, 288, 408, 1698, 2136
BlpI GCTNAGC 1 cut(s) 1647
BlsI GCNGC 6 cut(s) 199, 280, 289, 409, 1699, 2137
BmcAI AGTACT 2 cut(s) 2180, 2614
Bme1390I CCNGG 7 cut(s) 975, 1287, 1288, 1684, 2266, 2267, 2499
Bme18I GGWCC 1 cut(s) 2378
BmeT110I CYCGRG 4 cut(s) 717, 1286, 1866, 2265
BmgT120I GGNCC 4 cut(s) 1284, 1775, 2378, 2410
BmiI GGNNCC 4 cut(s) 377, 1359, 1369, 2380
BmrFI CCNGG 7 cut(s) 975, 1287, 1288, 1684, 2266, 2267, 2499
BmrI ACTGGG 1 cut(s) 1772
BmsI GCATC 8 cut(s) 58, 567, 637, 681, 1531, 2317, 2479, 2668
BmtI GCTAGC 1 cut(s) 584
BmuI ACTGGG 1 cut(s) 1772
BpiI GAAGAC 1 cut(s) 715
Bpu1102I GCTNAGC 1 cut(s) 1647
Bpu14I TTCGAA 2 cut(s) 940, 2115
BpuEI CTTGAG 3 cut(s) 369, 834, 1897
BpuMI CCSGG 5 cut(s) 1287, 1288, 1684, 2266, 2267
BsaI GGTCTC 1 cut(s) 1198
BsaJI CCNNGG 5 cut(s) 644, 1286, 2265, 2277, 2497
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 1116, 1146
Bsc4I CCNNNNNNNGG 4 cut(s) 674, 1214, 1317, 1682
Bse118I RCCGGY 1 cut(s) 1544
Bse1I ACTGG 6 cut(s) 392, 909, 1042, 1472, 1708, 1778
Bse3DI GCAATG 3 cut(s) 495, 1329, 2509
BseBI CCWGG 2 cut(s) 975, 2499
BseDI CCNNGG 5 cut(s) 644, 1286, 2265, 2277, 2497
BseGI GGATG 7 cut(s) 432, 556, 582, 1405, 1668, 2494, 2662
BseLI CCNNNNNNNGG 4 cut(s) 674, 1214, 1317, 1682
BseMI GCAATG 3 cut(s) 495, 1329, 2509
BseMII CTCAG 5 cut(s) 497, 1034, 1236, 1613, 1638
BseNI ACTGG 6 cut(s) 392, 909, 1042, 1472, 1708, 1778
BseRI GAGGAG 2 cut(s) 701, 2123
BseXI GCAGC 5 cut(s) 209, 265, 274, 419, 2122
BseYI CCCAGC 3 cut(s) 572, 704, 1317
BshFI GGCC 5 cut(s) 448, 1025, 1285, 1776, 2412
BsiHKAI GWGCWC 3 cut(s) 385, 484, 2584
BsiHKCI CYCGRG 4 cut(s) 717, 1286, 1866, 2265
BsiSI CCGG 5 cut(s) 1287, 1545, 1683, 2266, 2603
BslFI GGGAC 2 cut(s) 801, 2241
BslI CCNNNNNNNGG 4 cut(s) 674, 1214, 1317, 1682
BsmAI GTCTC 5 cut(s) 94, 332, 720, 795, 1198
BsmFI GGGAC 2 cut(s) 801, 2241
BsmI GAATGC 1 cut(s) 2636
BsnI GGCC 5 cut(s) 448, 1025, 1285, 1776, 2412
Bso31I GGTCTC 1 cut(s) 1198
BsoBI CYCGRG 4 cut(s) 717, 1286, 1866, 2265
Bsp119I TTCGAA 2 cut(s) 940, 2115
Bsp1286I GDGCHC 4 cut(s) 385, 484, 1309, 2584
Bsp1407I TGTACA 1 cut(s) 516
Bsp143I GATC 5 cut(s) 265, 486, 1000, 1155, 1902
Bsp1720I GCTNAGC 1 cut(s) 1647
BspACI CCGC 3 cut(s) 1104, 1697, 1923
BspANI GGCC 5 cut(s) 448, 1025, 1285, 1776, 2412
BspCNI CTCAG 5 cut(s) 496, 1033, 1235, 1612, 1639
BspHI TCATGA 1 cut(s) 2169
BspLI GGNNCC 4 cut(s) 377, 1359, 1369, 2380
BspOI GCTAGC 1 cut(s) 584
BspPI GGATC 3 cut(s) 260, 1163, 1897
BspQI GCTCTTC 1 cut(s) 993
BspT104I TTCGAA 2 cut(s) 940, 2115
BspTNI GGTCTC 1 cut(s) 1198
BsrDI GCAATG 3 cut(s) 495, 1329, 2509
BsrFI RCCGGY 1 cut(s) 1544
BsrGI TGTACA 1 cut(s) 516
BsrI ACTGG 6 cut(s) 392, 909, 1042, 1472, 1708, 1778
BssAI RCCGGY 1 cut(s) 1544
BssECI CCNNGG 5 cut(s) 644, 1286, 2265, 2277, 2497
BssMI GATC 5 cut(s) 265, 486, 1000, 1155, 1902
BssSI CACGAG 1 cut(s) 2483
BssT1I CCWWGG 1 cut(s) 2277
Bst2BI CACGAG 1 cut(s) 2483
Bst2UI CCWGG 2 cut(s) 975, 2499
Bst4CI ACNGT 9 cut(s) 88, 521, 754, 1046, 1078, 1276, 1418, 1444, 2008
Bst6I CTCTTC 3 cut(s) 288, 793, 993
BstAUI TGTACA 1 cut(s) 516
BstBI TTCGAA 2 cut(s) 940, 2115
BstC8I GCNNGC 2 cut(s) 469, 582
BstDEI CTNAG 6 cut(s) 483, 1020, 1222, 1295, 1599, 1647
BstDSI CCRYGG 1 cut(s) 644
BstF5I GGATG 7 cut(s) 432, 556, 582, 1405, 1668, 2494, 2662
BstH2I RGCGCY 1 cut(s) 1753
BstHHI GCGC 2 cut(s) 1116, 1752
BstKTI GATC 5 cut(s) 268, 489, 1003, 1158, 1905
BstMAI GTCTC 5 cut(s) 94, 332, 720, 795, 1198
BstMBI GATC 5 cut(s) 265, 486, 1000, 1155, 1902
BstMWI GCNNNNNNNGC 4 cut(s) 61, 284, 287, 992
BstNI CCWGG 2 cut(s) 975, 2499
BstSCI CCNGG 7 cut(s) 973, 1285, 1286, 1682, 2264, 2265, 2497
BstSFI CTRYAG 1 cut(s) 2215
BstV1I GCAGC 5 cut(s) 209, 265, 274, 419, 2122
BstV2I GAAGAC 1 cut(s) 715
BstX2I RGATCY 1 cut(s) 265
BstXI CCANNNNNNTGG 1 cut(s) 611
BstYI RGATCY 1 cut(s) 265
BsuI GTATCC 1 cut(s) 960
BsuRI GGCC 5 cut(s) 448, 1025, 1285, 1776, 2412
BtgI CCRYGG 1 cut(s) 644
BtgZI GCGATG 1 cut(s) 486
BtsCI GGATG 7 cut(s) 432, 556, 582, 1405, 1668, 2494, 2662
BtsI GCAGTG 1 cut(s) 1071
BtsIMutI CAGTG 7 cut(s) 84, 399, 759, 1071, 1083, 1777, 1785
Cac8I GCNNGC 2 cut(s) 469, 582
CciI TCATGA 1 cut(s) 2169
CfoI GCGC 2 cut(s) 1116, 1752
Cfr10I RCCGGY 1 cut(s) 1544
Cfr13I GGNCC 4 cut(s) 1284, 1775, 2378, 2410
Cfr9I CCCGGG 2 cut(s) 1286, 2265
CseI GACGC 1 cut(s) 447
Csp6I GTAC 8 cut(s) 517, 873, 1047, 1138, 1183, 1272, 2179, 2613
CspCI CAANNNNNGTGG 4 cut(s) 1640, 1675, 2491, 2526
CviAII CATG 4 cut(s) 334, 1093, 2170, 2708
CviQI GTAC 8 cut(s) 517, 873, 1047, 1138, 1183, 1272, 2179, 2613
DdeI CTNAG 6 cut(s) 483, 1020, 1222, 1295, 1599, 1647
DpnI GATC 5 cut(s) 267, 488, 1002, 1157, 1904
DpnII GATC 5 cut(s) 265, 486, 1000, 1155, 1902
DraI TTTAAA 1 cut(s) 2526
DrdI GACNNNNNNGTC 1 cut(s) 851
DseDI GACNNNNNNGTC 1 cut(s) 851
EaeI YGGCCR 1 cut(s) 446
Eam1104I CTCTTC 3 cut(s) 288, 793, 993
EarI CTCTTC 3 cut(s) 288, 793, 993
Ecl136II GAGCTC 2 cut(s) 383, 2582
Eco130I CCWWGG 1 cut(s) 2277
Eco24I GRGCYC 3 cut(s) 385, 1309, 2584
Eco31I GGTCTC 1 cut(s) 1198
Eco32I GATATC 1 cut(s) 1558
Eco47I GGWCC 1 cut(s) 2378
Eco53kI GAGCTC 2 cut(s) 383, 2582
Eco57I CTGAAG 8 cut(s) 123, 193, 312, 716, 719, 1043, 2495, 2712
Eco88I CYCGRG 4 cut(s) 717, 1286, 1866, 2265
EcoICRI GAGCTC 2 cut(s) 383, 2582
EcoRI GAATTC 3 cut(s) 154, 1478, 1766
EcoRII CCWGG 2 cut(s) 973, 2497
EcoRV GATATC 1 cut(s) 1558
EcoT14I CCWWGG 1 cut(s) 2277
EcoT22I ATGCAT 2 cut(s) 497, 2494
EcoT38I GRGCYC 3 cut(s) 385, 1309, 2584
ErhI CCWWGG 1 cut(s) 2277
FaeI CATG 4 cut(s) 337, 1096, 2173, 2711
FalI AAGNNNNNCTT 2 cut(s) 8, 40
FaqI GGGAC 2 cut(s) 801, 2241
FatI CATG 4 cut(s) 333, 1092, 2169, 2707
FauI CCCGC 1 cut(s) 1097
FauNDI CATATG 1 cut(s) 2155
FblI GTMKAC 1 cut(s) 1719
Fnu4HI GCNGC 6 cut(s) 198, 279, 288, 408, 1698, 2136
FokI GGATG 7 cut(s) 419, 563, 589, 1412, 1675, 2501, 2649
FriOI GRGCYC 3 cut(s) 385, 1309, 2584
Fsp4HI GCNGC 6 cut(s) 198, 279, 288, 408, 1698, 2136
FspBI CTAG 7 cut(s) 581, 683, 1008, 1520, 1617, 2231, 2288
GlaI GCGC 2 cut(s) 1115, 1751
GluI GCNGC 6 cut(s) 198, 279, 288, 408, 1698, 2136
GsaI CCCAGC 3 cut(s) 576, 708, 1321
HaeII RGCGCY 1 cut(s) 1753
HaeIII GGCC 5 cut(s) 448, 1025, 1285, 1776, 2412
HapII CCGG 5 cut(s) 1287, 1545, 1683, 2266, 2603
HgaI GACGC 1 cut(s) 447
HhaI GCGC 2 cut(s) 1116, 1752
Hin1II CATG 4 cut(s) 337, 1096, 2173, 2711
Hin6I GCGC 2 cut(s) 1114, 1750
HinP1I GCGC 2 cut(s) 1114, 1750
HincII GTYRAC 3 cut(s) 21, 1414, 2337
HindII GTYRAC 3 cut(s) 21, 1414, 2337
HindIII AAGCTT 1 cut(s) 698
HpaII CCGG 5 cut(s) 1287, 1545, 1683, 2266, 2603
HphI GGTGA 9 cut(s) 118, 689, 1139, 1552, 1565, 1672, 1810, 1936, 2266
Hpy99I CGWCG 1 cut(s) 441
HpyAV CCTTC 9 cut(s) 863, 1067, 1166, 1381, 1825, 2221, 2242, 2459, 2687
HpyCH4III ACNGT 9 cut(s) 88, 521, 754, 1046, 1078, 1276, 1418, 1444, 2008
HpyCH4IV ACGT 5 cut(s) 609, 1389, 1488, 2125, 2394
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 284, 287, 992
HpyF3I CTNAG 6 cut(s) 483, 1020, 1222, 1295, 1599, 1647
HpySE526I ACGT 5 cut(s) 609, 1389, 1488, 2125, 2394
Hsp92II CATG 4 cut(s) 337, 1096, 2173, 2711
HspAI GCGC 2 cut(s) 1114, 1750
Kzo9I GATC 5 cut(s) 265, 486, 1000, 1155, 1902
LguI GCTCTTC 1 cut(s) 993
LmnI GCTCC 5 cut(s) 137, 1747, 2299, 2587, 2656
Lsp1109I GCAGC 5 cut(s) 209, 265, 274, 419, 2122
LweI GCATC 8 cut(s) 58, 567, 637, 681, 1531, 2317, 2479, 2668
MaeI CTAG 7 cut(s) 581, 683, 1008, 1520, 1617, 2231, 2288
MaeII ACGT 5 cut(s) 609, 1389, 1488, 2125, 2394
MalI GATC 5 cut(s) 267, 488, 1002, 1157, 1904
MboI GATC 5 cut(s) 265, 486, 1000, 1155, 1902
MfeI CAATTG 1 cut(s) 2259
MflI RGATCY 1 cut(s) 265
MhlI GDGCHC 4 cut(s) 385, 484, 1309, 2584
MlsI TGGCCA 1 cut(s) 448
MluNI TGGCCA 1 cut(s) 448
MlyI GAGTC 5 cut(s) 220, 605, 797, 1622, 2246
MmeI TCCRAC 4 cut(s) 460, 503, 1173, 2121
Mox20I TGGCCA 1 cut(s) 448
Mph1103I ATGCAT 2 cut(s) 497, 2494
MroXI GAANNNNTTC 4 cut(s) 354, 1217, 1676, 2165
MscI TGGCCA 1 cut(s) 448
MseI TTAA 8 cut(s) 27, 147, 831, 1082, 1100, 1491, 1862, 2525
MslI CAYNNNNRTG 3 cut(s) 1031, 1982, 2487
Msp20I TGGCCA 1 cut(s) 448
MspA1I CMGCKG 2 cut(s) 200, 278
MspI CCGG 5 cut(s) 1287, 1545, 1683, 2266, 2603
MspR9I CCNGG 7 cut(s) 975, 1287, 1288, 1684, 2266, 2267, 2499
MunI CAATTG 1 cut(s) 2259
Mva1269I GAATGC 1 cut(s) 2636
MvaI CCWGG 2 cut(s) 975, 2499
MwoI GCNNNNNNNGC 4 cut(s) 61, 284, 287, 992
NciI CCSGG 5 cut(s) 1287, 1288, 1684, 2266, 2267
NdeI CATATG 1 cut(s) 2155
NdeII GATC 5 cut(s) 265, 486, 1000, 1155, 1902
NheI GCTAGC 1 cut(s) 580
NlaIII CATG 4 cut(s) 337, 1096, 2173, 2711
NlaIV GGNNCC 4 cut(s) 377, 1359, 1369, 2380
NmeAIII GCCGAG 1 cut(s) 785
NmuCI GTSAC 5 cut(s) 124, 597, 754, 2316, 2635
NsiI ATGCAT 2 cut(s) 497, 2494
NspV TTCGAA 2 cut(s) 940, 2115
PaeR7I CTCGAG 1 cut(s) 1866
PagI TCATGA 1 cut(s) 2169
PciSI GCTCTTC 1 cut(s) 993
PctI GAATGC 1 cut(s) 2636
PdmI GAANNNNTTC 4 cut(s) 354, 1217, 1676, 2165
PfeI GAWTC 9 cut(s) 882, 1011, 1218, 1291, 1786, 2024, 2093, 2220, 2569
PflMI CCANNNNNTGG 2 cut(s) 1214, 1317
PkrI GCNGC 6 cut(s) 199, 280, 289, 409, 1699, 2137
PleI GAGTC 5 cut(s) 220, 604, 797, 1621, 2246
PpsI GAGTC 5 cut(s) 220, 604, 797, 1621, 2246
Psp124BI GAGCTC 2 cut(s) 385, 2584
Psp1406I AACGTT 1 cut(s) 1389
Psp6I CCWGG 2 cut(s) 973, 2497
PspFI CCCAGC 3 cut(s) 572, 704, 1317
PspGI CCWGG 2 cut(s) 973, 2497
PspN4I GGNNCC 4 cut(s) 377, 1359, 1369, 2380
PspPI GGNCC 4 cut(s) 1284, 1775, 2378, 2410
PspXI VCTCGAGB 1 cut(s) 1866
PsuI RGATCY 1 cut(s) 265
PvuII CAGCTG 2 cut(s) 200, 278
RsaI GTAC 8 cut(s) 518, 874, 1048, 1139, 1184, 1273, 2180, 2614
RsaNI GTAC 8 cut(s) 517, 873, 1047, 1138, 1183, 1272, 2179, 2613
RseI CAYNNNNRTG 3 cut(s) 1031, 1982, 2487
SacI GAGCTC 2 cut(s) 385, 2584
SapI GCTCTTC 1 cut(s) 993
SaqAI TTAA 8 cut(s) 27, 147, 831, 1082, 1100, 1491, 1862, 2525
SatI GCNGC 6 cut(s) 198, 279, 288, 408, 1698, 2136
Sau3AI GATC 5 cut(s) 265, 486, 1000, 1155, 1902
Sau96I GGNCC 4 cut(s) 1284, 1775, 2378, 2410
ScaI AGTACT 2 cut(s) 2180, 2614
SchI GAGTC 5 cut(s) 220, 605, 797, 1622, 2246
ScrFI CCNGG 7 cut(s) 975, 1287, 1288, 1684, 2266, 2267, 2499
SduI GDGCHC 4 cut(s) 385, 484, 1309, 2584
SfaNI GCATC 8 cut(s) 58, 567, 637, 681, 1531, 2317, 2479, 2668
SfcI CTRYAG 1 cut(s) 2215
Sfr274I CTCGAG 1 cut(s) 1866
SfuI TTCGAA 2 cut(s) 940, 2115
SinI GGWCC 1 cut(s) 2378
SlaI CTCGAG 1 cut(s) 1866
SmaI CCCGGG 2 cut(s) 1288, 2267
SmiMI CAYNNNNRTG 3 cut(s) 1031, 1982, 2487
SmlI CTYRAG 4 cut(s) 384, 849, 1866, 1912
SmoI CTYRAG 4 cut(s) 384, 849, 1866, 1912
SpeI ACTAGT 1 cut(s) 1519
SsiI CCGC 3 cut(s) 1104, 1697, 1923
SspI AATATT 2 cut(s) 1149, 2424
SspMI CTAG 7 cut(s) 581, 683, 1008, 1520, 1617, 2231, 2288
SstI GAGCTC 2 cut(s) 385, 2584
StyD4I CCNGG 7 cut(s) 973, 1285, 1286, 1682, 2264, 2265, 2497
StyI CCWWGG 1 cut(s) 2277
TaaI ACNGT 9 cut(s) 88, 521, 754, 1046, 1078, 1276, 1418, 1444, 2008
TaiI ACGT 5 cut(s) 612, 1392, 1491, 2128, 2397
TatI WGTACW 4 cut(s) 516, 1137, 2178, 2612
TauI GCSGC 1 cut(s) 1700
TfiI GAWTC 9 cut(s) 882, 1011, 1218, 1291, 1786, 2024, 2093, 2220, 2569
Tru1I TTAA 8 cut(s) 27, 147, 831, 1082, 1100, 1491, 1862, 2525
Tru9I TTAA 8 cut(s) 27, 147, 831, 1082, 1100, 1491, 1862, 2525
TscAI CASTG 7 cut(s) 91, 399, 759, 1071, 1083, 1777, 1785
TseFI GTSAC 5 cut(s) 124, 597, 754, 2316, 2635
TseI GCWGC 5 cut(s) 197, 278, 287, 407, 2135
Tsp45I GTSAC 5 cut(s) 124, 597, 754, 2316, 2635
TspDTI ATGAA 9 cut(s) 233, 390, 715, 1685, 1799, 2016, 2092, 2158, 2186
TspGWI ACGGA 2 cut(s) 276, 1988
TspMI CCCGGG 2 cut(s) 1286, 2265
TspRI CASTG 7 cut(s) 91, 399, 759, 1071, 1083, 1777, 1785
Van91I CCANNNNNTGG 2 cut(s) 1214, 1317
VpaK11BI GGWCC 1 cut(s) 2378
XapI RAATTY 6 cut(s) 154, 1379, 1478, 1766, 2401, 2549
XbaI TCTAGA 1 cut(s) 2287
XhoI CTCGAG 1 cut(s) 1866
XmaI CCCGGG 2 cut(s) 1286, 2265
XmiI GTMKAC 1 cut(s) 1719
XmnI GAANNNNTTC 4 cut(s) 354, 1217, 1676, 2165
XspI CTAG 7 cut(s) 581, 683, 1008, 1520, 1617, 2231, 2288
ZrmI AGTACT 2 cut(s) 2180, 2614
Zsp2I ATGCAT 2 cut(s) 497, 2494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.