Rroxscaffold_1G00066250

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
87792828 .. 87795978
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00066250.1

Sequence Viewer

Length: 2541 bp
ATGTACTCTTCTCATTCTACAGAAAATAGAGACCAAAGGCATAGGCTCTTGTTTCCTCTGCTCATCTTCTACTTGCTATTCAATTTCTCCTATGCAGTTGAAGCTGAAGATGAAAAAAATGTCACCAACATTGGAGCAATCATTGATGTTAATTCCCGTATCGGCAAAGAACAGAAAGCTGCTATGGAAGTTGCAGCTGAAAACTTCAACAAACAGTCAGACACTCATGAGCTAATCCTTCATTTTCGAGATTCTGGCCGCGACCCTTTTCTTGCTGCTTTTGCTGCTAAACATTTGATAAAGGAACAAAAGGTACAAGTGATAATTGGCATGGAGACTTGGCAGGAGGCTATTACAGTAGCTGATGTAGTCCATAACCAACCTGAAAAAATTCCGGTCATTTCCTTTGCAGCACCAACCATAACCCCGCCGCTAATACAACGCCGTTGGCCTTTCTTGATAAGAATGGCAAGCGATGGTGCTGCTCAGATGGAATGCATTGGAGATACAGTTAGTGCATACAACTGGAAAAGGGTTGTTGTAATATATGAAGATAATGGTTATGGTGGTGGTATGGGGAGGCTAGCTCTTTTATCTGAGGCTCTAAGAAATGTTGGTTCTAAGATTGAGCATCGTATAGTTCTCCCACAACTTTCTGAGTCTGATACAAATTGGGATGAACTAAAGAAGCAGCTGTCGGAGATTCCCAAAGTAAATTCTCGGGCATTTATAGTTCTTCAGTCATCCTTACCAACTGTAACTGCTCTGTTCAAAGTGGCTAGGAAGATGGGATTTGTAGGAGCAGATTCAGCTTGGATAATCACAGAGAGTATTGCTAGTTTGCTTGACCCTCAGGGCAACTATGATATGGAAGGTACTCTGGGAATCAAGACCTACTATGACAGGGACACTAGTAGTTATGCCAGGTTTCAGAAAGAATTCCAAACAAGGTATTCAGAAGAAGATAACTCTAAGCCAGGAATTTATGCTCTTCGAGCATACGATATTATTTCAGTCATCACACAGGCCATAGGTGAAATACCTAGTAAGACTACTAATACTAGCCTTCAAGAGTCATTAGCTACACTATTGGGCAATTACAGCGGTTTGAGTGGGAAACTGGAATACGAAGGAGGTGAGGTACTGTTGGATTCTTCGACATTCAGGATTATAAATATTGTGGATGGGAAGACGGATAAAGAATTAAACTTTTGGACACCAGGGTTTGGATTTTCAGAAAGCCTTGAAGAAGTGTCAAACAGAAGTAGTGATGGTGTTGGACCTGTTGACAAAGTCATTTGGCCCGGTAACCTAACACTACGTCCCTCCAAAGGCTGGGCAATGCCCACTGCTGAGAAGAAATTGAAAATTGTGATTCCAATTCAAAACCGCCCATTTATAACTGTGAATGACTCAGCAGGGGAGAAGAAATATGATGGTTTCTGCATTCAACTTTTCAATATGGTGGTAGGAAATTTGAGTCATTTATATTCCTTGCCATATGAATTTCATGAGTTCAGTGGCAGTTTCAATGAGGCGATAGAATCAGTCTATGACAAGACTTACGATGCTATTGTTGGTGATATAACTGTACTTGTTGAACGAATCGACAAAGTGGAATTCACTCAACCATATCTGGAGTCTGGTTTGTCAATGATAGTTCCAGATATACCTGATGAGGAGGAAGCATGGATGTTTTTGAAACCTTTCTCATGGAATACGTGGGCGGTGACTGGTGGCATCTTAATCTACACGACCTTAGTAGTATGGTTCCTTGAGGTGCCATCAAATCCAGACTTCAATGGCTCATTTAAGAGTCAGATTGCCTTGGCAACTTGGTTCACCTTCTCATCTTTGTTCTTTGCTCACAGTAAAGTCCACAACAACTTGACTCGAGTAGTTTTTGTAGTGTGGCTATTTGTTGTATTGATCTTAAGCTCAAGCTACACTGCTAATCTGTCTTCAATGCTTACAATCCAACGACTGAGCCCGAATGTAACAGATATTGAAATGTTGAGGAGTACCAACTCATTAGTTGGTTGCGATAACGATTCATTTGTCAGGAATTACCTAGAGAATGTTCTTGGTTTCAATCAAGAGACTGTCAAGGTAATCAATAGCAGCTACAACCCGGAAGAAATCAGAAGTAAAAATTTATCTGCTGTATTTCTTGAATTGCCATATGCGCAAGTATTTATGGACAACCATACGGGCTTTACTCTCACCAAAGCCACCCACAGTTTTGGAGGCTTTAGCTTTGTATTTCAGAAAGGCTCTCCAATAGCTAGGGATTTCTCTAAGGTCATTCTAGATCTACTGGAGAATGGAGAAATGAGAAAACTTGAAGATCACTGGTTGACCCCAAACAAACGTCCAACCAATACAACTTCCGATACAACCAATACAACTTCCGCTATGCCAGAAAGCTTGCGCCTCGAGAGCTTTTGGGGTCTCTTTGTAATATCCGGGGCTACTTCCACCTTCTGTATTCTAATATCTCTTACTATCTGGCTAAAGAAGTTATATCGAGGCAATGTTTAA

Protein Analysis

846

Amino Acids

95.16

Weight (kDa)

5.29

Isoelectric Point (pI)

34.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 53 - 374 2.1e-19 Periplasmic binding protein
ANF_receptor PF01094 59 - 381 1.6e-36 Receptor family ligand binding region
SBP_bac_3 PF00497 455 - 787 1.7e-12 Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd PF10613 457 - 554 5.3e-11 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 571 - 824 7.8e-28 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1172, 1400
Acc16I TGCGCA 1 cut(s) 2187
AccB1I GGYRCC 1 cut(s) 1780
AccB7I CCANNNNNTGG 2 cut(s) 1226, 1335
AccII CGCG 1 cut(s) 261
AciI CCGC 7 cut(s) 259, 428, 431, 1104, 1390, 1727, 2412
AcoI YGGCCR 1 cut(s) 256
AcsI RAATTY 8 cut(s) 390, 715, 938, 981, 1474, 1505, 1619, 2152
AcuI CTGAAG 2 cut(s) 126, 722
AfaI GTAC 6 cut(s) 5, 315, 877, 1143, 1593, 2023
AfiI CCNNNNNNNGG 3 cut(s) 1226, 1331, 1335
AflII CTTAAG 1 cut(s) 1933
AhlI ACTAGT 1 cut(s) 911
AjnI CCWGG 3 cut(s) 923, 976, 1219
Alw26I GTCTC 4 cut(s) 24, 329, 2093, 2456
AlwNI CAGNNNCTG 1 cut(s) 362
Ama87I CYCGRG 3 cut(s) 720, 1893, 2435
AoxI GGCC 4 cut(s) 256, 449, 1026, 1301
ApeKI GCWGC 8 cut(s) 179, 194, 275, 284, 410, 482, 691, 2121
ApoI RAATTY 8 cut(s) 390, 715, 938, 981, 1474, 1505, 1619, 2152
Asp700I GAANNNNTTC 3 cut(s) 390, 938, 1706
AspLEI GCGC 2 cut(s) 2188, 2433
AspS9I GGNCC 2 cut(s) 1280, 1302
AsuC2I CCSGG 3 cut(s) 1305, 2132, 2467
AsuHPI GGTGA 7 cut(s) 115, 1046, 1148, 1592, 1741, 1834, 2215
AsuNHI GCTAGC 1 cut(s) 583
AvaI CYCGRG 3 cut(s) 720, 1893, 2435
AvaII GGWCC 1 cut(s) 1280
AxyI CCTNAGG 1 cut(s) 852
BanI GGYRCC 1 cut(s) 1780
BanII GRGCYC 1 cut(s) 1991
BbsI GAAGAC 2 cut(s) 1196, 1953
BbvI GCAGC 8 cut(s) 166, 206, 262, 271, 422, 469, 703, 2133
BccI CCATC 7 cut(s) 470, 484, 781, 1178, 1265, 1430, 1792
BceAI ACGGC 1 cut(s) 429
BcgI CGANNNNNNTGC 2 cut(s) 464, 498
BciT130I CCWGG 3 cut(s) 925, 978, 1221
BcnI CCSGG 3 cut(s) 1305, 2132, 2467
BcoDI GTCTC 4 cut(s) 24, 329, 2093, 2456
BcuI ACTAGT 1 cut(s) 911
BfaI CTAG 9 cut(s) 584, 780, 837, 912, 1044, 1062, 2072, 2286, 2309
BfmI CTRYAG 1 cut(s) 18
BfrI CTTAAG 1 cut(s) 1933
BglII AGATCT 1 cut(s) 2311
Bme1390I CCNGG 6 cut(s) 925, 978, 1221, 1305, 2132, 2467
Bme18I GGWCC 1 cut(s) 1280
BmeT110I CYCGRG 3 cut(s) 720, 1893, 2435
BmgT120I GGNCC 2 cut(s) 1280, 1302
BmiI GGNNCC 2 cut(s) 1772, 1782
BmrFI CCNGG 6 cut(s) 925, 978, 1221, 1305, 2132, 2467
BmsI GCATC 3 cut(s) 640, 1558, 1749
BmtI GCTAGC 1 cut(s) 587
BpiI GAAGAC 2 cut(s) 1196, 1953
BplI GAGNNNNNCTC 2 cut(s) 571, 603
BpmI CTGGAG 2 cut(s) 1658, 2339
BpuEI CTTGAG 2 cut(s) 1796, 1924
BpuMI CCSGG 3 cut(s) 1305, 2132, 2467
BsaAI YACGTR 1 cut(s) 1722
BsaI GGTCTC 2 cut(s) 24, 2456
BsaJI CCNNGG 3 cut(s) 1220, 1827, 2466
BsaWI WCCGGW 1 cut(s) 394
BsaXI ACNNNNNCTCC 4 cut(s) 495, 525, 1125, 1155
Bsc4I CCNNNNNNNGG 3 cut(s) 1226, 1331, 1335
Bse1I ACTGG 5 cut(s) 530, 1125, 1738, 2322, 2357
Bse21I CCTNAGG 1 cut(s) 852
Bse3DI GCAATG 2 cut(s) 1347, 2539
BseBI CCWGG 3 cut(s) 925, 978, 1221
BseDI CCNNGG 3 cut(s) 1220, 1827, 2466
BseGI GGATG 4 cut(s) 682, 743, 1189, 1698
BseLI CCNNNNNNNGG 3 cut(s) 1226, 1331, 1335
BseMI GCAATG 2 cut(s) 1347, 2539
BseMII CTCAG 7 cut(s) 500, 588, 648, 866, 1344, 1428, 1976
BseNI ACTGG 5 cut(s) 530, 1125, 1738, 2322, 2357
BseRI GAGGAG 2 cut(s) 1694, 2032
BseXI GCAGC 8 cut(s) 166, 206, 262, 271, 422, 469, 703, 2133
BseYI CCCAGC 1 cut(s) 1335
Bsh1236I CGCG 1 cut(s) 261
BshFI GGCC 4 cut(s) 258, 451, 1028, 1303
BshNI GGYRCC 1 cut(s) 1780
BsiHKCI CYCGRG 3 cut(s) 720, 1893, 2435
BsiSI CCGG 4 cut(s) 395, 1305, 2132, 2466
BslFI GGGAC 2 cut(s) 920, 1308
BslI CCNNNNNNNGG 3 cut(s) 1226, 1331, 1335
BsmAI GTCTC 4 cut(s) 24, 329, 2093, 2456
BsmFI GGGAC 2 cut(s) 920, 1308
BsmI GAATGC 2 cut(s) 500, 1446
BsnI GGCC 4 cut(s) 258, 451, 1028, 1303
Bso31I GGTCTC 2 cut(s) 24, 2456
BsoBI CYCGRG 3 cut(s) 720, 1893, 2435
Bsp1286I GDGCHC 1 cut(s) 1991
Bsp143I GATC 3 cut(s) 1929, 2311, 2347
BspACI CCGC 7 cut(s) 259, 428, 431, 1104, 1390, 1727, 2412
BspANI GGCC 4 cut(s) 258, 451, 1028, 1303
BspCNI CTCAG 7 cut(s) 499, 589, 649, 865, 1345, 1427, 1977
BspFNI CGCG 1 cut(s) 261
BspHI TCATGA 2 cut(s) 226, 1510
BspLI GGNNCC 2 cut(s) 1772, 1782
BspOI GCTAGC 1 cut(s) 587
BspQI GCTCTTC 1 cut(s) 996
BspT107I GGYRCC 1 cut(s) 1780
BspTI CTTAAG 1 cut(s) 1933
BspTNI GGTCTC 2 cut(s) 24, 2456
BsrDI GCAATG 2 cut(s) 1347, 2539
BsrI ACTGG 5 cut(s) 530, 1125, 1738, 2322, 2357
BssECI CCNNGG 3 cut(s) 1220, 1827, 2466
BssMI GATC 3 cut(s) 1929, 2311, 2347
BssT1I CCWWGG 1 cut(s) 1827
Bst2UI CCWGG 3 cut(s) 925, 978, 1221
Bst6I CTCTTC 2 cut(s) 13, 996
BstAFI CTTAAG 1 cut(s) 1933
BstBAI YACGTR 1 cut(s) 1722
BstC8I GCNNGC 3 cut(s) 472, 585, 2429
BstEII GGTNACC 1 cut(s) 1307
BstF5I GGATG 4 cut(s) 682, 743, 1189, 1698
BstFNI CGCG 1 cut(s) 261
BstHHI GCGC 2 cut(s) 2188, 2433
BstKTI GATC 3 cut(s) 1932, 2314, 2350
BstMAI GTCTC 4 cut(s) 24, 329, 2093, 2456
BstMBI GATC 3 cut(s) 1929, 2311, 2347
BstMWI GCNNNNNNNGC 8 cut(s) 101, 281, 284, 809, 995, 1101, 2185, 2439
BstNI CCWGG 3 cut(s) 925, 978, 1221
BstPI GGTNACC 1 cut(s) 1307
BstSCI CCNGG 6 cut(s) 923, 976, 1219, 1303, 2130, 2465
BstSFI CTRYAG 1 cut(s) 18
BstUI CGCG 1 cut(s) 261
BstV1I GCAGC 8 cut(s) 166, 206, 262, 271, 422, 469, 703, 2133
BstV2I GAAGAC 2 cut(s) 1196, 1953
BstX2I RGATCY 1 cut(s) 2311
BstXI CCANNNNNNTGG 1 cut(s) 2243
BstYI RGATCY 1 cut(s) 2311
Bsu36I CCTNAGG 1 cut(s) 852
BsuRI GGCC 4 cut(s) 258, 451, 1028, 1303
BtgZI GCGATG 1 cut(s) 489
BtsCI GGATG 4 cut(s) 682, 743, 1189, 1698
BtsI GCAGTG 2 cut(s) 1347, 1947
BtsIMutI CAGTG 4 cut(s) 1347, 1525, 1947, 2350
Cac8I GCNNGC 3 cut(s) 472, 585, 2429
CaiI CAGNNNCTG 1 cut(s) 362
CciI TCATGA 2 cut(s) 226, 1510
CfoI GCGC 2 cut(s) 2188, 2433
Cfr13I GGNCC 2 cut(s) 1280, 1302
Csp6I GTAC 6 cut(s) 4, 314, 876, 1142, 1592, 2022
CviAII CATG 5 cut(s) 227, 331, 1511, 1689, 1713
CviQI GTAC 6 cut(s) 4, 314, 876, 1142, 1592, 2022
DpnI GATC 3 cut(s) 1931, 2313, 2349
DpnII GATC 3 cut(s) 1929, 2311, 2347
EaeI YGGCCR 1 cut(s) 256
Eam1104I CTCTTC 2 cut(s) 13, 996
EarI CTCTTC 2 cut(s) 13, 996
Eco130I CCWWGG 1 cut(s) 1827
Eco24I GRGCYC 1 cut(s) 1991
Eco31I GGTCTC 2 cut(s) 24, 2456
Eco47I GGWCC 1 cut(s) 1280
Eco57I CTGAAG 2 cut(s) 126, 722
Eco81I CCTNAGG 1 cut(s) 852
Eco88I CYCGRG 3 cut(s) 720, 1893, 2435
Eco91I GGTNACC 1 cut(s) 1307
EcoO65I GGTNACC 1 cut(s) 1307
EcoRI GAATTC 2 cut(s) 938, 1619
EcoRII CCWGG 3 cut(s) 923, 976, 1219
EcoT14I CCWWGG 1 cut(s) 1827
EcoT22I ATGCAT 1 cut(s) 500
EcoT38I GRGCYC 1 cut(s) 1991
ErhI CCWWGG 1 cut(s) 1827
FaeI CATG 5 cut(s) 230, 334, 1514, 1692, 1716
FaqI GGGAC 2 cut(s) 920, 1308
FatI CATG 5 cut(s) 226, 330, 1510, 1688, 1712
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 2 cut(s) 1501, 2182
FokI GGATG 4 cut(s) 689, 730, 1196, 1705
FriOI GRGCYC 1 cut(s) 1991
FspBI CTAG 9 cut(s) 584, 780, 837, 912, 1044, 1062, 2072, 2286, 2309
FspI TGCGCA 1 cut(s) 2187
GlaI GCGC 2 cut(s) 2187, 2432
GsaI CCCAGC 1 cut(s) 1339
GsuI CTGGAG 2 cut(s) 1658, 2339
HaeIII GGCC 4 cut(s) 258, 451, 1028, 1303
HapII CCGG 4 cut(s) 395, 1305, 2132, 2466
HhaI GCGC 2 cut(s) 2188, 2433
Hin1II CATG 5 cut(s) 230, 334, 1514, 1692, 1716
Hin6I GCGC 2 cut(s) 2186, 2431
HinP1I GCGC 2 cut(s) 2186, 2431
HincII GTYRAC 2 cut(s) 1288, 2358
HindII GTYRAC 2 cut(s) 1288, 2358
HindIII AAGCTT 1 cut(s) 2425
HpaII CCGG 4 cut(s) 395, 1305, 2132, 2466
HphI GGTGA 7 cut(s) 115, 1046, 1148, 1592, 1741, 1834, 2215
Hpy166II GTNNAC 4 cut(s) 1288, 1842, 1879, 2358
Hpy8I GTNNAC 4 cut(s) 1288, 1842, 1879, 2358
HpyAV CCTTC 6 cut(s) 248, 866, 1076, 1124, 1855, 2491
HpyCH4IV ACGT 3 cut(s) 1321, 1721, 2371
HpyCH4V TGCA 6 cut(s) 95, 194, 410, 498, 518, 1446
HpyF10VI GCNNNNNNNGC 8 cut(s) 101, 281, 284, 809, 995, 1101, 2185, 2439
HpySE526I ACGT 3 cut(s) 1321, 1721, 2371
Hsp92II CATG 5 cut(s) 230, 334, 1514, 1692, 1716
HspAI GCGC 2 cut(s) 2186, 2431
Kzo9I GATC 3 cut(s) 1929, 2311, 2347
LguI GCTCTTC 1 cut(s) 996
LmnI GCTCC 2 cut(s) 134, 800
Lsp1109I GCAGC 8 cut(s) 166, 206, 262, 271, 422, 469, 703, 2133
LweI GCATC 3 cut(s) 640, 1558, 1749
MaeI CTAG 9 cut(s) 584, 780, 837, 912, 1044, 1062, 2072, 2286, 2309
MaeII ACGT 3 cut(s) 1321, 1721, 2371
MaeIII GTNAC 5 cut(s) 121, 757, 1307, 1729, 1996
MalI GATC 3 cut(s) 1931, 2313, 2349
MboI GATC 3 cut(s) 1929, 2311, 2347
MflI RGATCY 1 cut(s) 2311
MhlI GDGCHC 1 cut(s) 1991
MlyI GAGTC 7 cut(s) 668, 1082, 1406, 1489, 1649, 1825, 1885
MmeI TCCRAC 5 cut(s) 678, 1128, 1258, 2002, 2399
Mph1103I ATGCAT 1 cut(s) 500
MroXI GAANNNNTTC 3 cut(s) 390, 938, 1706
MseI TTAA 6 cut(s) 150, 1205, 1745, 1812, 1934, 2539
MspA1I CMGCKG 3 cut(s) 197, 694, 1104
MspCI CTTAAG 1 cut(s) 1933
MspI CCGG 4 cut(s) 395, 1305, 2132, 2466
MspR9I CCNGG 6 cut(s) 925, 978, 1221, 1305, 2132, 2467
Mva1269I GAATGC 2 cut(s) 500, 1446
MvaI CCWGG 3 cut(s) 925, 978, 1221
MvnI CGCG 1 cut(s) 261
MwoI GCNNNNNNNGC 8 cut(s) 101, 281, 284, 809, 995, 1101, 2185, 2439
NciI CCSGG 3 cut(s) 1305, 2132, 2467
NdeI CATATG 2 cut(s) 1501, 2182
NdeII GATC 3 cut(s) 1929, 2311, 2347
NheI GCTAGC 1 cut(s) 583
NlaIII CATG 5 cut(s) 230, 334, 1514, 1692, 1716
NlaIV GGNNCC 2 cut(s) 1772, 1782
NmuCI GTSAC 2 cut(s) 121, 1729
NsbI TGCGCA 1 cut(s) 2187
NsiI ATGCAT 1 cut(s) 500
PaeR7I CTCGAG 2 cut(s) 1893, 2435
PagI TCATGA 2 cut(s) 226, 1510
PciSI GCTCTTC 1 cut(s) 996
PctI GAATGC 2 cut(s) 500, 1446
PdmI GAANNNNTTC 3 cut(s) 390, 938, 1706
PfeI GAWTC 9 cut(s) 251, 703, 806, 885, 1151, 1375, 1544, 1605, 2051
PflFI GACNNNGTC 1 cut(s) 1292
PflMI CCANNNNNTGG 2 cut(s) 1226, 1335
PleI GAGTC 7 cut(s) 667, 1081, 1406, 1488, 1648, 1824, 1885
PpsI GAGTC 7 cut(s) 667, 1081, 1406, 1488, 1648, 1824, 1885
Ppu21I YACGTR 1 cut(s) 1722
PsiI TTATAA 2 cut(s) 1172, 1400
Psp6I CCWGG 3 cut(s) 923, 976, 1219
PspEI GGTNACC 1 cut(s) 1307
PspFI CCCAGC 1 cut(s) 1335
PspGI CCWGG 3 cut(s) 923, 976, 1219
PspN4I GGNNCC 2 cut(s) 1772, 1782
PspPI GGNCC 2 cut(s) 1280, 1302
PspXI VCTCGAGB 1 cut(s) 1893
PsrI GAACNNNNNNTAC 2 cut(s) 297, 329
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 1 cut(s) 2311
PsyI GACNNNGTC 1 cut(s) 1292
PvuII CAGCTG 2 cut(s) 197, 694
RsaI GTAC 6 cut(s) 5, 315, 877, 1143, 1593, 2023
RsaNI GTAC 6 cut(s) 4, 314, 876, 1142, 1592, 2022
SapI GCTCTTC 1 cut(s) 996
SaqAI TTAA 6 cut(s) 150, 1205, 1745, 1812, 1934, 2539
Sau3AI GATC 3 cut(s) 1929, 2311, 2347
Sau96I GGNCC 2 cut(s) 1280, 1302
SchI GAGTC 7 cut(s) 668, 1082, 1406, 1489, 1649, 1825, 1885
ScrFI CCNGG 6 cut(s) 925, 978, 1221, 1305, 2132, 2467
SduI GDGCHC 1 cut(s) 1991
SfaNI GCATC 3 cut(s) 640, 1558, 1749
SfcI CTRYAG 1 cut(s) 18
Sfr274I CTCGAG 2 cut(s) 1893, 2435
SinI GGWCC 1 cut(s) 1280
SlaI CTCGAG 2 cut(s) 1893, 2435
SmlI CTYRAG 5 cut(s) 1775, 1893, 1933, 1939, 2435
SmoI CTYRAG 5 cut(s) 1775, 1893, 1933, 1939, 2435
SpeI ACTAGT 1 cut(s) 911
SsiI CCGC 7 cut(s) 259, 428, 431, 1104, 1390, 1727, 2412
SspI AATATT 1 cut(s) 1177
SspMI CTAG 9 cut(s) 584, 780, 837, 912, 1044, 1062, 2072, 2286, 2309
StyD4I CCNGG 6 cut(s) 923, 976, 1219, 1303, 2130, 2465
StyI CCWWGG 1 cut(s) 1827
TaiI ACGT 3 cut(s) 1324, 1724, 2374
TaqI TCGA 7 cut(s) 247, 994, 1157, 1608, 1894, 2436, 2527
TatI WGTACW 2 cut(s) 3, 1591
TauI GCSGC 2 cut(s) 261, 433
TfiI GAWTC 9 cut(s) 251, 703, 806, 885, 1151, 1375, 1544, 1605, 2051
Tru1I TTAA 6 cut(s) 150, 1205, 1745, 1812, 1934, 2539
Tru9I TTAA 6 cut(s) 150, 1205, 1745, 1812, 1934, 2539
TscAI CASTG 4 cut(s) 1354, 1525, 1954, 2357
TseFI GTSAC 2 cut(s) 121, 1729
TseI GCWGC 8 cut(s) 179, 194, 275, 284, 410, 482, 691, 2121
Tsp45I GTSAC 2 cut(s) 121, 1729
TspDTI ATGAA 7 cut(s) 126, 230, 564, 693, 1499, 1518, 2043
TspGWI ACGGA 1 cut(s) 1208
TspRI CASTG 4 cut(s) 1354, 1525, 1954, 2357
Tth111I GACNNNGTC 1 cut(s) 1292
Van91I CCANNNNNTGG 2 cut(s) 1226, 1335
Vha464I CTTAAG 1 cut(s) 1933
VpaK11BI GGWCC 1 cut(s) 1280
XapI RAATTY 8 cut(s) 390, 715, 938, 981, 1474, 1505, 1619, 2152
XbaI TCTAGA 1 cut(s) 2308
XhoI CTCGAG 2 cut(s) 1893, 2435
XmnI GAANNNNTTC 3 cut(s) 390, 938, 1706
XspI CTAG 9 cut(s) 584, 780, 837, 912, 1044, 1062, 2072, 2286, 2309
Zsp2I ATGCAT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.