Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001709.1

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Reverse (-)

61167 .. 64593

Gene Structure 3427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001709.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

atggtcaataatgaggggctacattacacaatcggagatgtccacatccgagtgcgaggttactcgaccaacactgggatttggttcgtggttttgttataccgcaagtactctgaaacttcaagaatcgcatccaaagaaaatgaaggagttgcagttcaaaatgaaaaaattgtcactaacgttggagcaatcattaatgctgattcccgtatcggcaaagaacagaaagctgccatggaaattgcagctgaaagcttcaacaacaagtccggcaacactcgtgaactaatccttcattttcaagactccgggggagatccctttcttgctgcttctgaggttgaagagttgataaaggaaaacaaagtagaagtgattgttggcatggagacttggcaggaagcagctctagtagctgatcatgtgggaaaccaatctaaaaaaattccggtaatttcatttgcagcaccagccataaccgtgcctctaatgcaacagcgttggccatttctgatacgaatggcaagcaatggatctgctcagatgaaatgcattgcagatatagtttctgcatacaagtggaaaagggttgttgtgatatacgaagacgacggttatggtggtcaagttgggttgctagctcttttatctgaggctcttcaagatgcaaatgcaaagattgagaatcatttggttcttccgagactaaataattcttcgatggctaagcctaattgggatgaagtagaagagctgttgaagcttcccacctttcagtctcgggtgtttgttgttcttcaatcatctttaccaacagtgactaatctgttcagcgtggctaggaagatgggacttgtagggagagagtcggcttggataatcacagaatgtatcaccagtttgcttgaccctcaaggtgacgactctatggaaggaactctgggaatcaagaccgattacgccactgagtctagttcttatgctgaattccagaaggaattccaagctaagtatgcagaagaaaataacttcaagccaggaatttatgctcttcgagcatacgacactattactgtcatttcaaaggccttagaaaggatgcctaataacaccactagtacaagccttcagaatatgataactacattgttgagcaattacaagggtttaagtgggaatatgcacttgaaagaaggtgcagcactgttggattctctgagattcaggatcataaatgttgtggatgggaagaggaacaaagagttaaacttttggtcaccagaggttgggttctccgaaggcctaggctgggcagcctcacacgagaacctcacacgtgcgcctcaaggctggggaatgcctcctgctgggaagccaatgaaatttggggttccagctggtaacaagcacttcgaagaaaaagtatataccaactttgctcgggtagtatttcttctgtggctatttattgtattgatcttgagctcaagctacactgctagtctttcttccatgcttaccacccaacgaccgaccttaaatgtaacagctgaaatgttaaacaagactggtgcaaaagttggttgggatggaggtccatttgtctcaaagtatctgtcagatacctataaattcgatgctaacaacagaatcaatgtaagcagcaaaaacagctacactgatgcattcaaaagcaaaaatataactgctatgtttcttgaactcccatatgctcaagtctacatgaacgagctctgtgagggatatacttcaaccacacaaccctacgaatttggaggatttagctttatattccagaaaggctctccaatagctagggatttctctaaggccattctagagctattggagaatggatatatcaagcaacttcaaaatgaattattgactcccgagaagcagtgtccaaacactaatagtagaccaaaaagcttgagccttaatagcttttcgggtctctatgtaatatgcggtgctacttccaccctgtgtcttctactatcttttaccccatgtgtgaggaagtctcagaagcaagaaaagcacgaaggcaatgcaggtgcaagtgatgaatgtctccttcgatcccaacactccaacagtccgcaggccttcacatccgtagaaatcgaatgcgtgccacagagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

724

Amino Acids

80.34

Weight (kDa)

6.43

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2072
Acc36I	ACCTGC	1 cut(s)	2072
AccB7I	CCANNNNNTGG	1 cut(s)	1289
AccI	GTMKAC	2 cut(s)	1743, 1945
AciI	CCGC	3 cut(s)	103, 1995, 2129
AclI	AACGTT	1 cut(s)	183
AclWI	GGATC	4 cut(s)	314, 544, 1238, 2103
AcoI	YGGCCR	1 cut(s)	506
AcsI	RAATTY	7 cut(s)	447, 989, 1001, 1044, 1385, 1634, 1793
AcuI	CTGAAG	1 cut(s)	1115
AcvI	CACGTG	1 cut(s)	1340
AdeI	CACNNNGTG	1 cut(s)	2013
AfaI	GTAC	2 cut(s)	110, 1123
AfiI	CCNNNNNNNGG	5 cut(s)	75, 1098, 1289, 1312, 1370
AflIII	ACRYGT	1 cut(s)	1337
AhlI	ACTAGT	1 cut(s)	1118
AjnI	CCWGG	1 cut(s)	1039
AjuI	GAANNNNNNNTTGG	2 cut(s)	366, 398
AloI	GAACNNNNNNTCC	2 cut(s)	141, 173
Alw21I	GWGCWC	2 cut(s)	1490, 1758
Alw26I	GTCTC	7 cut(s)	386, 700, 786, 1612, 1985, 2055, 2105
AlwI	GGATC	4 cut(s)	314, 544, 1238, 2103
Ama87I	CYCGRG	3 cut(s)	783, 1443, 1916
AoxI	GGCC	5 cut(s)	506, 1089, 1303, 1854, 2133
ApeKI	GCWGC	8 cut(s)	233, 248, 332, 407, 467, 1202, 1316, 1665
ApoI	RAATTY	7 cut(s)	447, 989, 1001, 1044, 1385, 1634, 1793
ArsI	GACNNNNNNTTYG	2 cut(s)	1604, 1636
AseI	ATTAAT	1 cut(s)	198
Asp700I	GAANNNNTTC	1 cut(s)	1001
AspA2I	CCTAGG	1 cut(s)	1306
AspLEI	GCGC	1 cut(s)	1345
AspS9I	GGNCC	1 cut(s)	1598
AsuC2I	CCSGG	1 cut(s)	313
AsuHPI	GGTGA	3 cut(s)	889, 932, 1272
AsuII	TTCGAA	1 cut(s)	1416
AsuNHI	GCTAGC	1 cut(s)	640
AvaI	CYCGRG	3 cut(s)	783, 1443, 1916
AvaII	GGWCC	1 cut(s)	1598
AvrII	CCTAGG	1 cut(s)	1306
BalI	TGGCCA	1 cut(s)	508
BanII	GRGCYC	2 cut(s)	1490, 1758
BarI	GAAGNNNNNNTAC	2 cut(s)	1440, 1472
BauI	CACGAG	2 cut(s)	282, 1325
BbrPI	CACGTG	1 cut(s)	1340
BbsI	GAAGAC	2 cut(s)	615, 2009
Bbv12I	GWGCWC	2 cut(s)	1490, 1758
BbvI	GCAGC	8 cut(s)	220, 260, 319, 419, 479, 1214, 1328, 1677
BccI	CCATC	4 cut(s)	718, 844, 1241, 1586
BcgI	CGANNNNNNTGC	2 cut(s)	2060, 2094
BciT130I	CCWGG	1 cut(s)	1041
BclI	TGATCA	1 cut(s)	421
BcnI	CCSGG	1 cut(s)	313
BcoDI	GTCTC	7 cut(s)	386, 700, 786, 1612, 1985, 2055, 2105
BcuI	ACTAGT	1 cut(s)	1118
BfaI	CTAG	9 cut(s)	413, 641, 843, 975, 1119, 1307, 1503, 1839, 1862
BfuAI	ACCTGC	1 cut(s)	2072
BisI	GCNGC	8 cut(s)	234, 249, 333, 408, 468, 1203, 1317, 1666
BlnI	CCTAGG	1 cut(s)	1306
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	8 cut(s)	235, 250, 334, 409, 469, 1204, 1318, 1667
BmcAI	AGTACT	1 cut(s)	110
Bme1390I	CCNGG	2 cut(s)	313, 1041
Bme18I	GGWCC	1 cut(s)	1598
BmeT110I	CYCGRG	3 cut(s)	783, 1443, 1916
BmgT120I	GGNCC	1 cut(s)	1598
BmiI	GGNNCC	1 cut(s)	1395
BmrFI	CCNGG	2 cut(s)	313, 1041
BmrI	ACTGGG	1 cut(s)	84
BmsI	GCATC	5 cut(s)	140, 658, 1092, 1630, 1675
BmtI	GCTAGC	1 cut(s)	644
BmuI	ACTGGG	1 cut(s)	84
BpiI	GAAGAC	2 cut(s)	615, 2009
BplI	GAGNNNNNCTC	2 cut(s)	2035, 2067
Bpu1102I	GCTNAGC	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	1416
BpuEI	CTTGAG	6 cut(s)	900, 1332, 1474, 1504, 1722, 1978
BpuMI	CCSGG	1 cut(s)	313
BsaAI	YACGTR	1 cut(s)	1340
BsaI	GGTCTC	1 cut(s)	1985
BsaJI	CCNNGG	3 cut(s)	237, 312, 1306
BsaWI	WCCGGW	1 cut(s)	451
BsaXI	ACNNNNNCTCC	2 cut(s)	141, 171
Bsc4I	CCNNNNNNNGG	5 cut(s)	75, 1098, 1289, 1312, 1370
Bse1I	ACTGG	3 cut(s)	79, 900, 1576
Bse3DI	GCAATG	3 cut(s)	538, 555, 2083
BseBI	CCWGG	1 cut(s)	1041
BseDI	CCNNGG	3 cut(s)	237, 312, 1306
BseGI	GGATG	7 cut(s)	45, 131, 748, 1107, 1252, 1597, 2141
BseLI	CCNNNNNNNGG	5 cut(s)	75, 1098, 1289, 1312, 1370
BseMI	GCAATG	3 cut(s)	538, 555, 2083
BseMII	CTCAG	6 cut(s)	330, 557, 645, 960, 1211, 2066
BseNI	ACTGG	3 cut(s)	79, 900, 1576
BseXI	GCAGC	8 cut(s)	220, 260, 319, 419, 479, 1214, 1328, 1677
BseYI	CCCAGC	3 cut(s)	1311, 1353, 1370
BsgI	GTGCAG	1 cut(s)	1221
Bsh1285I	CGRYCG	1 cut(s)	1535
BshFI	GGCC	5 cut(s)	508, 1091, 1305, 1856, 2135
BsiEI	CGRYCG	1 cut(s)	1535
BsiHKAI	GWGCWC	2 cut(s)	1490, 1758
BsiHKCI	CYCGRG	3 cut(s)	783, 1443, 1916
BsiSI	CCGG	3 cut(s)	273, 312, 452
BslFI	GGGAC	1 cut(s)	867
BslI	CCNNNNNNNGG	5 cut(s)	75, 1098, 1289, 1312, 1370
BsmAI	GTCTC	7 cut(s)	386, 700, 786, 1612, 1985, 2055, 2105
BsmFI	GGGAC	1 cut(s)	867
BsmI	GAATGC	3 cut(s)	1365, 1688, 2162
BsnI	GGCC	5 cut(s)	508, 1091, 1305, 1856, 2135
Bso31I	GGTCTC	1 cut(s)	1985
BsoBI	CYCGRG	3 cut(s)	783, 1443, 1916
Bsp119I	TTCGAA	1 cut(s)	1416
Bsp1286I	GDGCHC	2 cut(s)	1490, 1758
Bsp143I	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
Bsp1720I	GCTNAGC	1 cut(s)	729
Bsp19I	CCATGG	1 cut(s)	237
BspACI	CCGC	3 cut(s)	103, 1995, 2129
BspANI	GGCC	5 cut(s)	508, 1091, 1305, 1856, 2135
BspCNI	CTCAG	6 cut(s)	331, 556, 646, 961, 1212, 2065
BspLI	GGNNCC	1 cut(s)	1395
BspMI	ACCTGC	1 cut(s)	2072
BspOI	GCTAGC	1 cut(s)	644
BspPI	GGATC	4 cut(s)	314, 544, 1238, 2103
BspQI	GCTCTTC	3 cut(s)	666, 747, 1059
BspT104I	TTCGAA	1 cut(s)	1416
BspTNI	GGTCTC	1 cut(s)	1985
BsrDI	GCAATG	3 cut(s)	538, 555, 2083
BsrI	ACTGG	3 cut(s)	79, 900, 1576
BssECI	CCNNGG	3 cut(s)	237, 312, 1306
BssMI	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
BssSI	CACGAG	2 cut(s)	282, 1325
BssT1I	CCWWGG	2 cut(s)	237, 1306
Bst2BI	CACGAG	2 cut(s)	282, 1325
Bst2UI	CCWGG	1 cut(s)	1041
Bst4CI	ACNGT	6 cut(s)	484, 617, 820, 1078, 1209, 2126
Bst6I	CTCTTC	5 cut(s)	342, 666, 747, 1059, 1247
BstBAI	YACGTR	1 cut(s)	1340
BstBI	TTCGAA	1 cut(s)	1416
BstC8I	GCNNGC	4 cut(s)	529, 642, 2133, 2162
BstDSI	CCRYGG	1 cut(s)	237
BstEII	GGTNACC	1 cut(s)	1278
BstENI	CCTNNNNNAGG	1 cut(s)	1096
BstF5I	GGATG	7 cut(s)	45, 131, 748, 1107, 1252, 1597, 2141
BstHHI	GCGC	1 cut(s)	1345
BstKTI	GATC	6 cut(s)	322, 424, 539, 1233, 1482, 2111
BstMAI	GTCTC	7 cut(s)	386, 700, 786, 1612, 1985, 2055, 2105
BstMBI	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
BstMCI	CGRYCG	1 cut(s)	1535
BstMWI	GCNNNNNNNGC	9 cut(s)	416, 473, 493, 763, 1016, 1058, 1674, 1968, 2065
BstNI	CCWGG	1 cut(s)	1041
BstPI	GGTNACC	1 cut(s)	1278
BstSCI	CCNGG	2 cut(s)	311, 1039
BstV1I	GCAGC	8 cut(s)	220, 260, 319, 419, 479, 1214, 1328, 1677
BstV2I	GAAGAC	2 cut(s)	615, 2009
BstX2I	RGATCY	2 cut(s)	319, 536
BstYI	RGATCY	2 cut(s)	319, 536
BsuRI	GGCC	5 cut(s)	508, 1091, 1305, 1856, 2135
BtgI	CCRYGG	1 cut(s)	237
BtsCI	GGATG	7 cut(s)	45, 131, 748, 1107, 1252, 1597, 2141
BtsI	GCAGTG	2 cut(s)	1497, 1931
BtsIMutI	CAGTG	7 cut(s)	72, 825, 966, 1205, 1497, 1680, 1931
BveI	ACCTGC	1 cut(s)	2072
Cac8I	GCNNGC	4 cut(s)	529, 642, 2133, 2162
CfoI	GCGC	1 cut(s)	1345
Cfr13I	GGNCC	1 cut(s)	1598
Csp6I	GTAC	2 cut(s)	109, 1122
CviAII	CATG	6 cut(s)	238, 388, 425, 1516, 1747, 2037
CviQI	GTAC	2 cut(s)	109, 1122
DpnI	GATC	6 cut(s)	321, 423, 538, 1232, 1481, 2110
DpnII	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
DraIII	CACNNNGTG	1 cut(s)	2013
EaeI	YGGCCR	1 cut(s)	506
Eam1104I	CTCTTC	5 cut(s)	342, 666, 747, 1059, 1247
EarI	CTCTTC	5 cut(s)	342, 666, 747, 1059, 1247
Ecl136II	GAGCTC	2 cut(s)	1488, 1756
Eco130I	CCWWGG	2 cut(s)	237, 1306
Eco147I	AGGCCT	3 cut(s)	1091, 1305, 2135
Eco24I	GRGCYC	2 cut(s)	1490, 1758
Eco31I	GGTCTC	1 cut(s)	1985
Eco47I	GGWCC	1 cut(s)	1598
Eco53kI	GAGCTC	2 cut(s)	1488, 1756
Eco57I	CTGAAG	1 cut(s)	1115
Eco72I	CACGTG	1 cut(s)	1340
Eco88I	CYCGRG	3 cut(s)	783, 1443, 1916
Eco91I	GGTNACC	1 cut(s)	1278
EcoICRI	GAGCTC	2 cut(s)	1488, 1756
EcoNI	CCTNNNNNAGG	1 cut(s)	1096
EcoO65I	GGTNACC	1 cut(s)	1278
EcoRI	GAATTC	2 cut(s)	989, 1001
EcoRII	CCWGG	1 cut(s)	1039
EcoT14I	CCWWGG	2 cut(s)	237, 1306
EcoT22I	ATGCAT	2 cut(s)	557, 1690
EcoT38I	GRGCYC	2 cut(s)	1490, 1758
ErhI	CCWWGG	2 cut(s)	237, 1306
FaeI	CATG	6 cut(s)	241, 391, 428, 1519, 1750, 2040
FaqI	GGGAC	1 cut(s)	867
FatI	CATG	6 cut(s)	237, 387, 424, 1515, 1746, 2036
FauNDI	CATATG	1 cut(s)	1732
FbaI	TGATCA	1 cut(s)	421
FblI	GTMKAC	2 cut(s)	1743, 1945
Fnu4HI	GCNGC	8 cut(s)	234, 249, 333, 408, 468, 1203, 1317, 1666
FokI	GGATG	7 cut(s)	32, 118, 755, 1114, 1259, 1604, 2128
FriOI	GRGCYC	2 cut(s)	1490, 1758
Fsp4HI	GCNGC	8 cut(s)	234, 249, 333, 408, 468, 1203, 1317, 1666
FspBI	CTAG	9 cut(s)	413, 641, 843, 975, 1119, 1307, 1503, 1839, 1862
GlaI	GCGC	1 cut(s)	1344
GluI	GCNGC	8 cut(s)	234, 249, 333, 408, 468, 1203, 1317, 1666
GsaI	CCCAGC	3 cut(s)	1315, 1357, 1374
HaeIII	GGCC	5 cut(s)	508, 1091, 1305, 1856, 2135
HapII	CCGG	3 cut(s)	273, 312, 452
HhaI	GCGC	1 cut(s)	1345
Hin1II	CATG	6 cut(s)	241, 391, 428, 1519, 1750, 2040
Hin6I	GCGC	1 cut(s)	1343
HinP1I	GCGC	1 cut(s)	1343
HindIII	AAGCTT	3 cut(s)	256, 764, 1954
HpaII	CCGG	3 cut(s)	273, 312, 452
HphI	GGTGA	3 cut(s)	889, 932, 1272
Hpy166II	GTNNAC	4 cut(s)	43, 287, 1744, 1946
Hpy8I	GTNNAC	4 cut(s)	43, 287, 1744, 1946
Hpy99I	CGWCG	1 cut(s)	617
HpyCH4III	ACNGT	6 cut(s)	484, 617, 820, 1078, 1209, 2126
HpyCH4IV	ACGT	2 cut(s)	183, 1339
HpyF10VI	GCNNNNNNNGC	9 cut(s)	416, 473, 493, 763, 1016, 1058, 1674, 1968, 2065
HpySE526I	ACGT	2 cut(s)	183, 1339
Hsp92II	CATG	6 cut(s)	241, 391, 428, 1519, 1750, 2040
HspAI	GCGC	1 cut(s)	1343
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
LguI	GCTCTTC	3 cut(s)	666, 747, 1059
LmnI	GCTCC	1 cut(s)	188
Lsp1109I	GCAGC	8 cut(s)	220, 260, 319, 419, 479, 1214, 1328, 1677
LweI	GCATC	5 cut(s)	140, 658, 1092, 1630, 1675
MaeI	CTAG	9 cut(s)	413, 641, 843, 975, 1119, 1307, 1503, 1839, 1862
MaeII	ACGT	2 cut(s)	183, 1339
MaeIII	GTNAC	7 cut(s)	59, 175, 820, 920, 1278, 1403, 1546
MalI	GATC	6 cut(s)	321, 423, 538, 1232, 1481, 2110
MboI	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
MflI	RGATCY	2 cut(s)	319, 536
MhlI	GDGCHC	2 cut(s)	1490, 1758
MlsI	TGGCCA	1 cut(s)	508
MluNI	TGGCCA	1 cut(s)	508
MlyI	GAGTC	5 cut(s)	302, 878, 920, 980, 1906
MmeI	TCCRAC	3 cut(s)	166, 1191, 2145
Mox20I	TGGCCA	1 cut(s)	508
Mph1103I	ATGCAT	2 cut(s)	557, 1690
MroXI	GAANNNNTTC	1 cut(s)	1001
MscI	TGGCCA	1 cut(s)	508
MseI	TTAA	6 cut(s)	198, 1172, 1268, 1541, 1562, 1965
MslI	CAYNNNNRTG	4 cut(s)	50, 482, 580, 2170
Msp20I	TGGCCA	1 cut(s)	508
MspA1I	CMGCKG	3 cut(s)	251, 1400, 1553
MspI	CCGG	3 cut(s)	273, 312, 452
MspR9I	CCNGG	2 cut(s)	313, 1041
Mva1269I	GAATGC	3 cut(s)	1365, 1688, 2162
MvaI	CCWGG	1 cut(s)	1041
MwoI	GCNNNNNNNGC	9 cut(s)	416, 473, 493, 763, 1016, 1058, 1674, 1968, 2065
NciI	CCSGG	1 cut(s)	313
NcoI	CCATGG	1 cut(s)	237
NdeI	CATATG	1 cut(s)	1732
NdeII	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
NheI	GCTAGC	1 cut(s)	640
NlaIII	CATG	6 cut(s)	241, 391, 428, 1519, 1750, 2040
NlaIV	GGNNCC	1 cut(s)	1395
NmuCI	GTSAC	4 cut(s)	175, 820, 920, 1278
NsiI	ATGCAT	2 cut(s)	557, 1690
NspV	TTCGAA	1 cut(s)	1416
PaqCI	CACCTGC	1 cut(s)	2072
PceI	AGGCCT	3 cut(s)	1091, 1305, 2135
PciSI	GCTCTTC	3 cut(s)	666, 747, 1059
PctI	GAATGC	3 cut(s)	1365, 1688, 2162
PdmI	GAANNNNTTC	1 cut(s)	1001
PfeI	GAWTC	7 cut(s)	126, 206, 688, 948, 1214, 1224, 1653
PflMI	CCANNNNNTGG	1 cut(s)	1289
PkrI	GCNGC	8 cut(s)	235, 250, 334, 409, 469, 1204, 1318, 1667
PleI	GAGTC	5 cut(s)	302, 877, 920, 979, 1906
PmaCI	CACGTG	1 cut(s)	1340
PmlI	CACGTG	1 cut(s)	1340
PpsI	GAGTC	5 cut(s)	302, 877, 920, 979, 1906
Ppu21I	YACGTR	1 cut(s)	1340
PshBI	ATTAAT	1 cut(s)	198
Psp124BI	GAGCTC	2 cut(s)	1490, 1758
Psp1406I	AACGTT	1 cut(s)	183
Psp6I	CCWGG	1 cut(s)	1039
PspCI	CACGTG	1 cut(s)	1340
PspEI	GGTNACC	1 cut(s)	1278
PspFI	CCCAGC	3 cut(s)	1311, 1353, 1370
PspGI	CCWGG	1 cut(s)	1039
PspN4I	GGNNCC	1 cut(s)	1395
PspPI	GGNCC	1 cut(s)	1598
PsuI	RGATCY	2 cut(s)	319, 536
PvuII	CAGCTG	3 cut(s)	251, 1400, 1553
RsaI	GTAC	2 cut(s)	110, 1123
RsaNI	GTAC	2 cut(s)	109, 1122
RseI	CAYNNNNRTG	4 cut(s)	50, 482, 580, 2170
SacI	GAGCTC	2 cut(s)	1490, 1758
SapI	GCTCTTC	3 cut(s)	666, 747, 1059
SaqAI	TTAA	6 cut(s)	198, 1172, 1268, 1541, 1562, 1965
SatI	GCNGC	8 cut(s)	234, 249, 333, 408, 468, 1203, 1317, 1666
Sau3AI	GATC	6 cut(s)	319, 421, 536, 1230, 1479, 2108
Sau96I	GGNCC	1 cut(s)	1598
ScaI	AGTACT	1 cut(s)	110
SchI	GAGTC	5 cut(s)	302, 878, 920, 980, 1906
ScrFI	CCNGG	2 cut(s)	313, 1041
SduI	GDGCHC	2 cut(s)	1490, 1758
SfaNI	GCATC	5 cut(s)	140, 658, 1092, 1630, 1675
SfuI	TTCGAA	1 cut(s)	1416
SinI	GGWCC	1 cut(s)	1598
SmiMI	CAYNNNNRTG	4 cut(s)	50, 482, 580, 2170
SmlI	CTYRAG	6 cut(s)	915, 1347, 1483, 1489, 1737, 1957
SmoI	CTYRAG	6 cut(s)	915, 1347, 1483, 1489, 1737, 1957
SpeI	ACTAGT	1 cut(s)	1118
SseBI	AGGCCT	3 cut(s)	1091, 1305, 2135
SsiI	CCGC	3 cut(s)	103, 1995, 2129
SspMI	CTAG	9 cut(s)	413, 641, 843, 975, 1119, 1307, 1503, 1839, 1862
SstI	GAGCTC	2 cut(s)	1490, 1758
StuI	AGGCCT	3 cut(s)	1091, 1305, 2135
StyD4I	CCNGG	2 cut(s)	311, 1039
StyI	CCWWGG	2 cut(s)	237, 1306
TaaI	ACNGT	6 cut(s)	484, 617, 820, 1078, 1209, 2126
TaiI	ACGT	2 cut(s)	186, 1342
TaqI	TCGA	7 cut(s)	65, 722, 1057, 1416, 1638, 2107, 2154
TaqII	GACCGA	2 cut(s)	971, 1549
TatI	WGTACW	2 cut(s)	108, 1121
TfiI	GAWTC	7 cut(s)	126, 206, 688, 948, 1214, 1224, 1653
Tru1I	TTAA	6 cut(s)	198, 1172, 1268, 1541, 1562, 1965
Tru9I	TTAA	6 cut(s)	198, 1172, 1268, 1541, 1562, 1965
TscAI	CASTG	7 cut(s)	79, 825, 973, 1212, 1504, 1687, 1931
TseFI	GTSAC	4 cut(s)	175, 820, 920, 1278
TseI	GCWGC	8 cut(s)	233, 248, 332, 407, 467, 1202, 1316, 1665
Tsp45I	GTSAC	4 cut(s)	175, 820, 920, 1278
TspGWI	ACGGA	1 cut(s)	2134
TspRI	CASTG	7 cut(s)	79, 825, 973, 1212, 1504, 1687, 1931
Van91I	CCANNNNNTGG	1 cut(s)	1289
VpaK11BI	GGWCC	1 cut(s)	1598
VspI	ATTAAT	1 cut(s)	198
XagI	CCTNNNNNAGG	1 cut(s)	1096
XapI	RAATTY	7 cut(s)	447, 989, 1001, 1044, 1385, 1634, 1793
XbaI	TCTAGA	1 cut(s)	1861
XmaJI	CCTAGG	1 cut(s)	1306
XmiI	GTMKAC	2 cut(s)	1743, 1945
XmnI	GAANNNNTTC	1 cut(s)	1001
XspI	CTAG	9 cut(s)	413, 641, 843, 975, 1119, 1307, 1503, 1839, 1862
ZrmI	AGTACT	1 cut(s)	110
Zsp2I	ATGCAT	2 cut(s)	557, 1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.