pycom05g28310

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
29083672 .. 29086929
3258 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g28310.5

Sequence Viewer

Length: 2637 bp
ATGGAGATCGCAGCTGAGAGCTTCAACAACCGTTCGAAGACTCATAAGCTCATCCTTCATTTTCGTGACTCCCGCAGATACCCCTTTCTTGCTGCTTCTGCTGCTGAAGAATTGATAAAGGAGAAGAAAGTAGAAGTAATAGTTGGCACGGAGACATGGGAGGAAGCAGCTCAAGTAGCTGATCTTGTCGGAAACCAAACTCAAATTCCGGTGATTTCATTTGCATCGCCCTCTATAACCCCGCCACTAATGCAACGCCGATGGCCATTTTTGATACGAATAGCAACAGATGGTTATGCTCAGATGAAATGCATTGCGGATATAGTTTCAGCTTACCATTGGAAAACGGTGGTTGTAGTATACGAAGATGATGGCTATGGCGGCGATGTTGGGATGCTAGCTCTTTTGACCGAGGCGCTCCAAGATGTCGGTTCAAAGATTGAGCACCGTTTGGTTCTTCCGCAGATTTCTTCGCTGTCTAATCCAAACTGGGTTGAGCTGGAAGAGATGTTGAGGCTTCCCACCATGCAGTCTCGAGTGTTTATCATTCTCCAGTCATCGTTGCCTACGGTGACTAATCTATTTCGATTGGCTGGGAAGATGGGACTTGTTGGAAAAGAGTCAGCTTCGATCATCACCGAGAGTATTACAAGTTTGCTTGACCCTCAACACACCTCTGACATGAAAGGCACTCTGGGAATCAAGACCTACTATTCCAATAATACTAGTTCTTATACAAATTTTCGGAAGAAAGTCCAAACGAAGTATTCAGAAGGAAATAGCGCCCAGCCAGGAATTTACGCTCTTCGAGCATATGATGCTATTGGAATCATTTCACAGGCCATAGGAAGAATGACTGACAAGAAAACTAGCCTTGAGGTGTTGAAAACCGTATTGAGCAGTTATACAGGTTTGAGTGCGAACATGCGGTTAAACGGCGGTGAGGTACTGTACTCTCCAGTTTTCAGGATTGAAAATATTTTGGATGAGAATAGATTCCAAGAATTGAACTATTGGAAACCGGAAGTTGGGTTCTCATCGGATGAAGCAGGGAAATACAGATTCAGTGATGTTGGTGGAGTAATCTGGCCCGGGAACCTAACTAGTGCCCCGAAAGGCTGGGCAATGCCTACTGTTGAGAAGCCGATGAGAATTGGGGTGCCGGGTAAAACTTCCTTCAGCAAATTTGTGAAGGTTGATCGGTCCAGGCAAGACTCAGATAAGAAGAAGTATGTCGGTTTCTGCATTGCAATTTTTGATATGGTCATAAAACGTTTGAACTATTCTCTGCCGTATCAATTCGAAGTTTTTGATGGCTTGTACGATGATCTTGTGGAACAAGTCCATAAAAAGGTTTATGATGCTGTGGTTGGTGACATAACCGTGCTAGCTAATCGGCTGGACAAGGTGGAATTCACTCAGCCATATATGGAGTCTGGTTTGTCAATGATAGTTCCGGCAAAACCCGAAAAATCAACATGGATGTTTATGAAACCTTTCACATGGCAAATATGGGTGGTGACTGGTTCCATCTTCATCTACACAGTGTTCATCATATGGTTCCTGGAGCGCCCGTCGAATCCAGCATTCGGTGGCCCCTTGAAGAATCAGATTGGCACAGCAACTTGGTTCACCTTCTCCACTTTGTTCTTTGCTCACAGTAAGTACCAATTTTGTACATTTCACTACCAAAAAAAAGAGAAAATCTACAGCAACTTAACGCGAGTGGTGGTCGTAGTCTGGCTCTTTGTTGTATTGAGCCTGACTTCAAGCTACACCGCTAATCTCTCTTCAATGCTCACCGTCCAACGACTGAAACTGAATGCAACATACATCGACGCCGACTCGAAAGTTGGTTGCAACGGGAACTTATTTGTCATTGAGTACCTGCAGAATGTCCTTGGATTCAAAAACATCATCAAAGTGAAAAGCGAATACGACTACCCGAATGAATTCAAAAACAAAACTATAGAGGCCGCCTTTCTTGAACTCCCATATGCAGAAGTCTTCATGAATGAATACTGCGAAGGATATACTGCCACTGCAACCACCCATAGTTTTGGAGGCTTGAGCTTTATATTCCAGAGAGGTTCTCCGATAGTGCGTGATTTCTCGAAGGTGATTCTAGAGCTGTTGGAGAATGGGGAAGTGAAGAAGCTACAAAATGAATGGTTGACTCCCAACAAGGAGTGTCCAAGAAATGCAACTTCGAACGAACCAGAAAGCTTGACCCTCAACAGTTTTACAGGCCTCTATGTAATATCAGCTGCTACTTCCACCTTATGCTTTCTGCTCTCTTTTACCATCAGGCTGAGGAGGTTTCAGCATCAAGAGGCAGCACAACAAGGCAGTGCAAGTCCGATCCCAACCGGAGAAACGCTTTTGAACAAGGCAGTTAGAATGGCAAAAACAATTTGCACTAGAGAGATTGACGTTCCAACCAGATCTCCATTTTTTACTTTTTTCGCAGAAGAACGGAGTTCTCCAATGTGGGAGTACTCCACCACTTCCACTACTCCTCAGCTTCCTCATCACACCTACAATCCACCAGAAATTGAATGCAATCCAATGCAATCCAATCCAATCCAATCCAATCCGCCCAAACCGAAATCAACCCAACTGGTTCAATTCCTTTGA

Protein Analysis

879

Amino Acids

99.26

Weight (kDa)

8.41

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1896
AccB1I GGYRCC 1 cut(s) 1159
AccI GTMKAC 1 cut(s) 360
AccII CGCG 1 cut(s) 1723
AclI AACGTT 1 cut(s) 1273
AclWI GGATC 1 cut(s) 2356
AcoI YGGCCR 1 cut(s) 263
AcsI RAATTY 6 cut(s) 204, 739, 795, 1184, 1412, 1952
AcuI CTGAAG 2 cut(s) 126, 1162
AcyI GRCGYC 1 cut(s) 1839
AfaI GTAC 7 cut(s) 948, 953, 1322, 1667, 1678, 1886, 2498
AfiI CCNNNNNNNGG 3 cut(s) 1028, 1351, 1589
AhlI ACTAGT 2 cut(s) 725, 1103
AjnI CCWGG 3 cut(s) 790, 1205, 1563
AjuI GAANNNNNNNTTGG 4 cut(s) 126, 158, 189, 221
AloI GAACNNNNNNTCC 2 cut(s) 1016, 1048
Alw21I GWGCWC 1 cut(s) 447
Alw26I GTCTC 2 cut(s) 146, 537
AlwI GGATC 1 cut(s) 2356
Ama87I CYCGRG 2 cut(s) 534, 1091
AoxI GGCC 6 cut(s) 263, 840, 1088, 1594, 1974, 2248
ApeKI GCWGC 6 cut(s) 11, 92, 101, 167, 2267, 2336
ApoI RAATTY 6 cut(s) 204, 739, 795, 1184, 1412, 1952
Asp700I GAANNNNTTC 4 cut(s) 832, 995, 1496, 1952
AspLEI GCGC 3 cut(s) 418, 785, 1572
AspS9I GGNCC 3 cut(s) 1089, 1203, 1595
AsuC2I CCSGG 3 cut(s) 1092, 1093, 1164
AsuHPI GGTGA 9 cut(s) 223, 583, 628, 953, 1385, 1531, 1624, 1792, 2131
AsuII TTCGAA 3 cut(s) 35, 1302, 2210
AsuNHI GCTAGC 2 cut(s) 397, 1387
AvaI CYCGRG 2 cut(s) 534, 1091
AvaII GGWCC 1 cut(s) 1203
BaeGI GKGCMC 1 cut(s) 1111
BalI TGGCCA 1 cut(s) 265
BanI GGYRCC 1 cut(s) 1159
BbsI GAAGAC 2 cut(s) 44, 1999
Bbv12I GWGCWC 1 cut(s) 447
BbvCI CCTCAGC 2 cut(s) 2312, 2520
BbvI GCAGC 6 cut(s) 23, 79, 88, 179, 2254, 2348
BccI CCATC 7 cut(s) 255, 284, 365, 595, 1307, 1538, 2312
BceAI ACGGC 2 cut(s) 952, 1276
BciT130I CCWGG 3 cut(s) 792, 1207, 1565
BcnI CCSGG 3 cut(s) 1092, 1093, 1164
BcoDI GTCTC 2 cut(s) 146, 537
BcuI ACTAGT 2 cut(s) 725, 1103
BfaI CTAG 7 cut(s) 398, 726, 870, 1104, 1388, 2126, 2421
BfmI CTRYAG 3 cut(s) 1708, 1889, 1968
BfoI RGCGCY 3 cut(s) 419, 786, 1573
BfuAI ACCTGC 1 cut(s) 1896
BglII AGATCT 1 cut(s) 2444
BisI GCNGC 8 cut(s) 12, 93, 102, 168, 382, 1977, 2268, 2337
BlsI GCNGC 8 cut(s) 13, 94, 103, 169, 383, 1978, 2269, 2338
BmcAI AGTACT 1 cut(s) 2498
Bme1390I CCNGG 6 cut(s) 792, 1092, 1093, 1164, 1207, 1565
Bme18I GGWCC 1 cut(s) 1203
BmeT110I CYCGRG 2 cut(s) 534, 1091
BmgT120I GGNCC 3 cut(s) 1089, 1203, 1595
BmiI GGNNCC 5 cut(s) 1097, 1161, 1528, 1562, 1597
BmrFI CCNGG 6 cut(s) 792, 1092, 1093, 1164, 1207, 1565
BmrI ACTGGG 1 cut(s) 499
BmsI GCATC 5 cut(s) 233, 384, 808, 1351, 2335
BmtI GCTAGC 2 cut(s) 401, 1391
BmuI ACTGGG 1 cut(s) 499
BpiI GAAGAC 2 cut(s) 44, 1999
BplI GAGNNNNNCTC 2 cut(s) 2077, 2109
BpmI CTGGAG 3 cut(s) 536, 942, 1586
Bpu10I CCTNAGC 2 cut(s) 2312, 2520
Bpu14I TTCGAA 3 cut(s) 35, 1302, 2210
BpuEI CTTGAG 3 cut(s) 156, 896, 2089
BpuMI CCSGG 3 cut(s) 1092, 1093, 1164
BsaHI GRCGYC 1 cut(s) 1839
BsaJI CCNNGG 3 cut(s) 411, 1091, 1900
BsaWI WCCGGW 3 cut(s) 208, 1021, 2369
BsaXI ACNNNNNCTCC 4 cut(s) 1559, 1589, 2431, 2461
Bsc4I CCNNNNNNNGG 3 cut(s) 1028, 1351, 1589
Bse1I ACTGG 5 cut(s) 494, 553, 959, 1528, 2625
Bse3DI GCAATG 3 cut(s) 312, 1131, 1245
BseBI CCWGG 3 cut(s) 792, 1207, 1565
BseDI CCNNGG 3 cut(s) 411, 1091, 1900
BseGI GGATG 5 cut(s) 51, 399, 991, 1048, 1488
BseLI CCNNNNNNNGG 3 cut(s) 1028, 1351, 1589
BseMI GCAATG 3 cut(s) 312, 1131, 1245
BseMII CTCAG 6 cut(s) 6, 314, 1230, 1433, 2303, 2534
BseNI ACTGG 5 cut(s) 494, 553, 959, 1528, 2625
BseRI GAGGAG 2 cut(s) 2329, 2508
BseSI GKGCMC 1 cut(s) 1111
BseXI GCAGC 6 cut(s) 23, 79, 88, 179, 2254, 2348
BseYI CCCAGC 3 cut(s) 593, 786, 1119
Bsh1236I CGCG 1 cut(s) 1723
BshFI GGCC 6 cut(s) 265, 842, 1090, 1596, 1976, 2250
BshNI GGYRCC 1 cut(s) 1159
BsiHKAI GWGCWC 1 cut(s) 447
BsiHKCI CYCGRG 2 cut(s) 534, 1091
BsiSI CCGG 6 cut(s) 209, 1022, 1092, 1163, 1457, 2370
BslFI GGGAC 1 cut(s) 618
BslI CCNNNNNNNGG 3 cut(s) 1028, 1351, 1589
BsmAI GTCTC 2 cut(s) 146, 537
BsmFI GGGAC 1 cut(s) 618
BsmI GAATGC 3 cut(s) 1586, 1828, 2564
BsnI GGCC 6 cut(s) 265, 842, 1090, 1596, 1976, 2250
BsoBI CYCGRG 2 cut(s) 534, 1091
Bsp119I TTCGAA 3 cut(s) 35, 1302, 2210
Bsp1286I GDGCHC 2 cut(s) 447, 1111
Bsp1407I TGTACA 1 cut(s) 1676
Bsp143I GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
BspANI GGCC 6 cut(s) 265, 842, 1090, 1596, 1976, 2250
BspCNI CTCAG 6 cut(s) 7, 313, 1229, 1432, 2304, 2533
BspFNI CGCG 1 cut(s) 1723
BspHI TCATGA 1 cut(s) 2010
BspLI GGNNCC 5 cut(s) 1097, 1161, 1528, 1562, 1597
BspMAI CTGCAG 1 cut(s) 1893
BspMI ACCTGC 1 cut(s) 1896
BspOI GCTAGC 2 cut(s) 401, 1391
BspPI GGATC 1 cut(s) 2356
BspQI GCTCTTC 1 cut(s) 810
BspT104I TTCGAA 3 cut(s) 35, 1302, 2210
BspT107I GGYRCC 1 cut(s) 1159
BsrDI GCAATG 3 cut(s) 312, 1131, 1245
BsrGI TGTACA 1 cut(s) 1676
BsrI ACTGG 5 cut(s) 494, 553, 959, 1528, 2625
BssECI CCNNGG 3 cut(s) 411, 1091, 1900
BssMI GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
BssNAI GTATAC 1 cut(s) 361
BssNI GRCGYC 1 cut(s) 1839
BssT1I CCWWGG 1 cut(s) 1900
Bst1107I GTATAC 1 cut(s) 361
Bst2UI CCWGG 3 cut(s) 792, 1207, 1565
Bst6I CTCTTC 3 cut(s) 498, 810, 1795
BstACI GRCGYC 1 cut(s) 1839
BstAPI GCANNNNNTGC 1 cut(s) 818
BstAUI TGTACA 1 cut(s) 1676
BstBI TTCGAA 3 cut(s) 35, 1302, 2210
BstC8I GCNNGC 2 cut(s) 399, 1389
BstDEI CTNAG 6 cut(s) 15, 300, 1216, 1419, 2312, 2520
BstF5I GGATG 5 cut(s) 51, 399, 991, 1048, 1488
BstFNI CGCG 1 cut(s) 1723
BstH2I RGCGCY 3 cut(s) 419, 786, 1573
BstHHI GCGC 3 cut(s) 418, 785, 1572
BstKTI GATC 7 cut(s) 9, 184, 633, 1201, 1330, 2364, 2447
BstMAI GTCTC 2 cut(s) 146, 537
BstMBI GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
BstMWI GCNNNNNNNGC 7 cut(s) 98, 101, 176, 250, 381, 809, 818
BstNI CCWGG 3 cut(s) 792, 1207, 1565
BstNSI RCATGY 1 cut(s) 928
BstSCI CCNGG 6 cut(s) 790, 1090, 1091, 1162, 1205, 1563
BstSFI CTRYAG 3 cut(s) 1708, 1889, 1968
BstSLI GKGCMC 1 cut(s) 1111
BstUI CGCG 1 cut(s) 1723
BstV1I GCAGC 6 cut(s) 23, 79, 88, 179, 2254, 2348
BstV2I GAAGAC 2 cut(s) 44, 1999
BstX2I RGATCY 1 cut(s) 2444
BstXI CCANNNNNNTGG 1 cut(s) 2060
BstYI RGATCY 1 cut(s) 2444
BstZ17I GTATAC 1 cut(s) 361
BsuRI GGCC 6 cut(s) 265, 842, 1090, 1596, 1976, 2250
BtgZI GCGATG 2 cut(s) 210, 399
BtsCI GGATG 5 cut(s) 51, 399, 991, 1048, 1488
BtsI GCAGTG 2 cut(s) 2040, 2356
BtsIMutI CAGTG 4 cut(s) 1072, 1551, 2040, 2356
BveI ACCTGC 1 cut(s) 1896
Cac8I GCNNGC 2 cut(s) 399, 1389
CciI TCATGA 1 cut(s) 2010
CfoI GCGC 3 cut(s) 418, 785, 1572
Cfr13I GGNCC 3 cut(s) 1089, 1203, 1595
Cfr9I CCCGGG 1 cut(s) 1091
CseI GACGC 1 cut(s) 1847
Csp6I GTAC 7 cut(s) 947, 952, 1321, 1666, 1677, 1885, 2497
CviAII CATG 7 cut(s) 156, 526, 682, 925, 1479, 1503, 2011
CviQI GTAC 7 cut(s) 947, 952, 1321, 1666, 1677, 1885, 2497
DdeI CTNAG 6 cut(s) 15, 300, 1216, 1419, 2312, 2520
DpnI GATC 7 cut(s) 8, 183, 632, 1200, 1329, 2363, 2446
DpnII GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
EaeI YGGCCR 1 cut(s) 263
Eam1104I CTCTTC 3 cut(s) 498, 810, 1795
EarI CTCTTC 3 cut(s) 498, 810, 1795
EciI GGCGGA 1 cut(s) 2586
Eco130I CCWWGG 1 cut(s) 1900
Eco147I AGGCCT 1 cut(s) 2250
Eco47I GGWCC 1 cut(s) 1203
Eco57I CTGAAG 2 cut(s) 126, 1162
Eco88I CYCGRG 2 cut(s) 534, 1091
EcoRI GAATTC 2 cut(s) 1412, 1952
EcoRII CCWGG 3 cut(s) 790, 1205, 1563
EcoT14I CCWWGG 1 cut(s) 1900
EcoT22I ATGCAT 1 cut(s) 314
ErhI CCWWGG 1 cut(s) 1900
FaeI CATG 7 cut(s) 159, 529, 685, 928, 1482, 1506, 2014
FaqI GGGAC 1 cut(s) 618
FatI CATG 7 cut(s) 155, 525, 681, 924, 1478, 1502, 2010
FauI CCCGC 2 cut(s) 80, 249
FauNDI CATATG 3 cut(s) 814, 1556, 1996
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 8 cut(s) 12, 93, 102, 168, 382, 1977, 2268, 2337
FokI GGATG 5 cut(s) 38, 406, 998, 1055, 1495
Fsp4HI GCNGC 8 cut(s) 12, 93, 102, 168, 382, 1977, 2268, 2337
FspBI CTAG 7 cut(s) 398, 726, 870, 1104, 1388, 2126, 2421
GlaI GCGC 3 cut(s) 417, 784, 1571
GluI GCNGC 8 cut(s) 12, 93, 102, 168, 382, 1977, 2268, 2337
GsaI CCCAGC 3 cut(s) 597, 790, 1123
GsuI CTGGAG 3 cut(s) 536, 942, 1586
HaeII RGCGCY 3 cut(s) 419, 786, 1573
HaeIII GGCC 6 cut(s) 265, 842, 1090, 1596, 1976, 2250
HapII CCGG 6 cut(s) 209, 1022, 1092, 1163, 1457, 2370
HgaI GACGC 1 cut(s) 1847
HhaI GCGC 3 cut(s) 418, 785, 1572
Hin1I GRCGYC 1 cut(s) 1839
Hin1II CATG 7 cut(s) 159, 529, 685, 928, 1482, 1506, 2014
Hin6I GCGC 3 cut(s) 416, 783, 1570
HinP1I GCGC 3 cut(s) 416, 783, 1570
HincII GTYRAC 1 cut(s) 2175
HindII GTYRAC 1 cut(s) 2175
HindIII AAGCTT 1 cut(s) 2224
HpaII CCGG 6 cut(s) 209, 1022, 1092, 1163, 1457, 2370
HphI GGTGA 9 cut(s) 223, 583, 628, 953, 1385, 1531, 1624, 1792, 2131
Hpy166II GTNNAC 3 cut(s) 361, 1632, 2175
Hpy8I GTNNAC 3 cut(s) 361, 1632, 2175
Hpy99I CGWCG 2 cut(s) 1579, 1841
HpyAV CCTTC 7 cut(s) 65, 767, 1186, 1186, 1645, 2021, 2110
HpyCH4IV ACGT 2 cut(s) 1273, 2433
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 101, 176, 250, 381, 809, 818
HpyF3I CTNAG 6 cut(s) 15, 300, 1216, 1419, 2312, 2520
HpySE526I ACGT 2 cut(s) 1273, 2433
Hsp92I GRCGYC 1 cut(s) 1839
Hsp92II CATG 7 cut(s) 159, 529, 685, 928, 1482, 1506, 2014
HspAI GCGC 3 cut(s) 416, 783, 1570
Kzo9I GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 2 cut(s) 423, 1567
Lsp1109I GCAGC 6 cut(s) 23, 79, 88, 179, 2254, 2348
LweI GCATC 5 cut(s) 233, 384, 808, 1351, 2335
MaeI CTAG 7 cut(s) 398, 726, 870, 1104, 1388, 2126, 2421
MaeII ACGT 2 cut(s) 1273, 2433
MaeIII GTNAC 4 cut(s) 65, 571, 1373, 1519
MalI GATC 7 cut(s) 8, 183, 632, 1200, 1329, 2363, 2446
MboI GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
MflI RGATCY 1 cut(s) 2444
MhlI GDGCHC 2 cut(s) 447, 1111
MlsI TGGCCA 1 cut(s) 265
MluNI TGGCCA 1 cut(s) 265
MlyI GAGTC 7 cut(s) 34, 62, 629, 1208, 1442, 1838, 2170
MmeI TCCRAC 5 cut(s) 169, 592, 1831, 2115, 2462
Mox20I TGGCCA 1 cut(s) 265
Mph1103I ATGCAT 1 cut(s) 314
MroXI GAANNNNTTC 4 cut(s) 832, 995, 1496, 1952
MscI TGGCCA 1 cut(s) 265
MseI TTAA 2 cut(s) 932, 1718
MslI CAYNNNNRTG 3 cut(s) 63, 1382, 1922
Msp20I TGGCCA 1 cut(s) 265
MspA1I CMGCKG 2 cut(s) 14, 2267
MspI CCGG 6 cut(s) 209, 1022, 1092, 1163, 1457, 2370
MspR9I CCNGG 6 cut(s) 792, 1092, 1093, 1164, 1207, 1565
Mva1269I GAATGC 3 cut(s) 1586, 1828, 2564
MvaI CCWGG 3 cut(s) 792, 1207, 1565
MvnI CGCG 1 cut(s) 1723
MwoI GCNNNNNNNGC 7 cut(s) 98, 101, 176, 250, 381, 809, 818
NciI CCSGG 3 cut(s) 1092, 1093, 1164
NdeI CATATG 3 cut(s) 814, 1556, 1996
NdeII GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
NheI GCTAGC 2 cut(s) 397, 1387
NlaIII CATG 7 cut(s) 159, 529, 685, 928, 1482, 1506, 2014
NlaIV GGNNCC 5 cut(s) 1097, 1161, 1528, 1562, 1597
NmuCI GTSAC 4 cut(s) 65, 571, 1373, 1519
NsiI ATGCAT 1 cut(s) 314
NspI RCATGY 1 cut(s) 928
NspV TTCGAA 3 cut(s) 35, 1302, 2210
PaeR7I CTCGAG 1 cut(s) 534
PagI TCATGA 1 cut(s) 2010
PceI AGGCCT 1 cut(s) 2250
PciSI GCTCTTC 1 cut(s) 810
PctI GAATGC 3 cut(s) 1586, 1828, 2564
PdmI GAANNNNTTC 4 cut(s) 832, 995, 1496, 1952
PfeI GAWTC 8 cut(s) 699, 828, 996, 1062, 1579, 1606, 1905, 2122
PfoI TCCNGGA 1 cut(s) 1563
PkrI GCNGC 8 cut(s) 13, 94, 103, 169, 383, 1978, 2269, 2338
PleI GAGTC 7 cut(s) 34, 62, 628, 1208, 1441, 1838, 2170
PpsI GAGTC 7 cut(s) 34, 62, 628, 1208, 1441, 1838, 2170
Psp1406I AACGTT 1 cut(s) 1273
Psp6I CCWGG 3 cut(s) 790, 1205, 1563
PspFI CCCAGC 3 cut(s) 593, 786, 1119
PspGI CCWGG 3 cut(s) 790, 1205, 1563
PspN4I GGNNCC 5 cut(s) 1097, 1161, 1528, 1562, 1597
PspPI GGNCC 3 cut(s) 1089, 1203, 1595
PstI CTGCAG 1 cut(s) 1893
PsuI RGATCY 1 cut(s) 2444
PvuII CAGCTG 2 cut(s) 14, 2267
RsaI GTAC 7 cut(s) 948, 953, 1322, 1667, 1678, 1886, 2498
RsaNI GTAC 7 cut(s) 947, 952, 1321, 1666, 1677, 1885, 2497
RseI CAYNNNNRTG 3 cut(s) 63, 1382, 1922
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 2 cut(s) 932, 1718
SatI GCNGC 8 cut(s) 12, 93, 102, 168, 382, 1977, 2268, 2337
Sau3AI GATC 7 cut(s) 6, 181, 630, 1198, 1327, 2361, 2444
Sau96I GGNCC 3 cut(s) 1089, 1203, 1595
ScaI AGTACT 1 cut(s) 2498
SchI GAGTC 7 cut(s) 34, 62, 629, 1208, 1442, 1838, 2170
ScrFI CCNGG 6 cut(s) 792, 1092, 1093, 1164, 1207, 1565
SduI GDGCHC 2 cut(s) 447, 1111
SfaNI GCATC 5 cut(s) 233, 384, 808, 1351, 2335
SfcI CTRYAG 3 cut(s) 1708, 1889, 1968
Sfr274I CTCGAG 1 cut(s) 534
SfuI TTCGAA 3 cut(s) 35, 1302, 2210
SinI GGWCC 1 cut(s) 1203
SlaI CTCGAG 1 cut(s) 534
SmaI CCCGGG 1 cut(s) 1093
SmiMI CAYNNNNRTG 3 cut(s) 63, 1382, 1922
SmlI CTYRAG 4 cut(s) 171, 534, 875, 2068
SmoI CTYRAG 4 cut(s) 171, 534, 875, 2068
SpeI ACTAGT 2 cut(s) 725, 1103
SseBI AGGCCT 1 cut(s) 2250
SspI AATATT 1 cut(s) 979
SspMI CTAG 7 cut(s) 398, 726, 870, 1104, 1388, 2126, 2421
StuI AGGCCT 1 cut(s) 2250
StyD4I CCNGG 6 cut(s) 790, 1090, 1091, 1162, 1205, 1563
StyI CCWWGG 1 cut(s) 1900
TaiI ACGT 2 cut(s) 1276, 2436
TaqII GACCGA 2 cut(s) 425, 1191
TatI WGTACW 3 cut(s) 951, 1676, 2496
TauI GCSGC 2 cut(s) 384, 1979
TfiI GAWTC 8 cut(s) 699, 828, 996, 1062, 1579, 1606, 1905, 2122
Tru1I TTAA 2 cut(s) 932, 1718
Tru9I TTAA 2 cut(s) 932, 1718
TscAI CASTG 4 cut(s) 1072, 1551, 2047, 2356
TseFI GTSAC 4 cut(s) 65, 571, 1373, 1519
TseI GCWGC 6 cut(s) 11, 92, 101, 167, 2267, 2336
Tsp45I GTSAC 4 cut(s) 65, 571, 1373, 1519
TspGWI ACGGA 2 cut(s) 164, 2491
TspMI CCCGGG 1 cut(s) 1091
TspRI CASTG 4 cut(s) 1072, 1551, 2047, 2356
VpaK11BI GGWCC 1 cut(s) 1203
XapI RAATTY 6 cut(s) 204, 739, 795, 1184, 1412, 1952
XbaI TCTAGA 1 cut(s) 2125
XceI RCATGY 1 cut(s) 928
XhoI CTCGAG 1 cut(s) 534
XmaI CCCGGG 1 cut(s) 1091
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 4 cut(s) 832, 995, 1496, 1952
XspI CTAG 7 cut(s) 398, 726, 870, 1104, 1388, 2126, 2421
ZrmI AGTACT 1 cut(s) 2498
Zsp2I ATGCAT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.