Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Forward (+)

13103967 .. 13109145

Gene Structure 5179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2730 bp

ATGGCTTTTCCTTGTGCATATACCTTTAACAAAATCCAAAGACTTTGGATGCTGCTTCCTCTTCTCATCATCTTCACCATCATCACTCTCTATCATGTTGCTGAAGCTGAAAATGAGAAAACGTTCATCAATTTTGGAGGAATCGTTAATCTGAACACTCGTATAGGTAAAGAACAGAAAATTGCTATGGTTATTGCAACGGAAAAGTTCAACAGCCTCTCAAACACTCATAGCCTGATCCCTCATTTTCGACACTCTGACAGAGATCCCTTGGTTGCTGCACTTGCTGCTAAAGAGTTGATAAAGGACAAGAAGGTAAATCTGATAGTTGGAATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATGTGGGGAACCGAGCTCAAGTTCCGGTGATTTCATTTGCAGCACCTACTATAACCCCACCTCTAATACACCATGACTGGCCATTTCTGATACGAGTGGCAAGCGATCGCGCTGTTCAAATGAAATGCATTGCAGATATAGTGTCTTTGTACAGTTGGAAAAGAGTTATAGTTATATACCAGGATGATGGTTATGGTGGTGATTCTGGGATGCTAGCTCTTTTATCCGAGGCTCTTCAAGATGTTGGCTCAAAGATCGAGCATCATTTGGTTCTCCCAAGGGTTTCTTCTCTGTCTAATCCTAGTTGGGGTGAACTAGAAGAGATGTTGAAGCTTCCCACCTTTCAATCTCGGGTGTTCATTGTTCTTCAGTCATCTTTCTCAGCAGCCACCAATCTGTTCAGGGTGGCAAAAAAGATGGGCCTTGTAGAAAGAGACTCAGCTTGGATAATCACAGAGAGTATTACAAGTTTGCTCGAGTCTCAAGTCAATCATGATATGGAAGGTACTTTGGGAATCAAGACCTACTATGACTCTAACAGTAGTTCCTATGCCAAGTTTGAGAAGGAATTCCAAACAAGATTTCCAGAAGAAGATAACTCCAAGCCAGGAATTTATGCTCTTCGATCATACGATATTATGGAAATCATAGCACAGGCCATAAGGAAGACTACTAACAATACTACTGACCTTCAGGTGTTGTTAAATACAGTGAACAAACATATGGGATTAAGTGGCGAAATGCACTTGAAAAGAGGTGAAGTGTTGAACACTCCAACTTTCAGGATCATAAATATTGTGAAAGGGAACAAATACAAAGAACTGAACTTTAGGGGACCAGGGTTTGGATTCTCAAAGAGCCTTACAAAAGAAAAAAGCGAAAACAGAACTCATGATGTTGGTACAGTAGTTTGGCCCGGCAATCTGATTGAACGAGCCCCCAAAGGCTGGGCAATGCCTACTGTACGAAAGCCATTGAGAATTGTGGTTCCAGGTAGAACCTCCTTCAGCGCATTTGTAAAGGTTGATTCAAGGAAGAACACTCTCCCGTATGACGGTTTCTGCATTCAGATTTTCTACAAGGTGCTAGGTCTCTTGGACTATCCTCTGCTATATGAGTTCCATGCCGTTAATGGCTCATACGATGATCTGGTAGAACTAGTCCATAACAAGACTTTCGATGCTGGTGTTGGTGATTTCACCGTACTAGCAGGTCGATTGGACAAAGTGGAATTCACTCAGCCATATATGGAGTCTGGTTTGTCAATGATAGTTCAAGAAAAAAATGAGCAATTAACATGGATGTTTATAAAACCTCTTACCTGGCAAATGTGGGCGGCGAGTGGTGCTGTATTAGTCTACACAATCTTGATTATATGGTTTCTGGAGCGCCCGTCTAATCCAGAATTCAGTGGTCCATTGAAGAATCAGATTGGCACCGCAACTTGGTTCACCTTCACCTCTTTGTTCTTTTCTCAGAGAGAGAAAATCCATAACAACTTAACTCGAGTAGTTGTTATAATGTGGCTGTTTGTTGTATTAATCCTAACCTCAAGCTACACCGCTAATTTGTCGTCAATGCTCACCATCCAACGATTGAAACCAAATGTAACAGACATCGAAATGCTAAAGAGAACCGACACAAAAGTTGGCTTGGATGGGGATTCGTTTGTCGAAGATTACTTGAAGGATGTACTTCAATTCAACTCAAAGGACATCATCACAATAAGCGATGAATTCAAGTACACAGAGGCATTCAGAAACAAAAGTATATCTGCTGCCTTTCTTGAACTCCCATATGCAAAAGTATTCATGAACCACTACTGCAAGGGATATACTGCAACCGCACCCACCTATAGATTTGGAGGACTAGGCTTTATATTTCAGAAGGGCTCTCCAATTGCCCAGGATTTCACCAAGGCCATTCTACAATTACTGGAGGATGGAGAACTTAAGTCACTTGAAGATACTTGGTTGACACCGAATCGTGACTGTCCAAACAATGCAACTTCCGATGTTCCAGAAAGCTTGAGTGTCAAGAATTTTATGGGCCTTTATGTAATATCCGGTGCTACTTCCACCATTTGCCTCCTATTATCCTTCACCATCTTGCTGAAGAAGTATCAACAACACCAGGAAGCATACCTAGGAAATGCAAGTGATGAAAGTGTTTGGAACAGGACAGTTAGAATAGCGAGATTCTTGTATAATAGAGAGTTCAATGTTCCAATAAGCAGAGCTCCAAGTTTTGTTGATGTGCTGGAATTGACTTCTTCCCGAGAGGAGCATGTGATCATTTCCACCCCTCAGGAGGTTGAGGCCTCCAACCCTGCACAAACTGAAGGCAGTCCACCACATTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

910

Amino Acids

102.73

Weight (kDa)

6.7

Isoelectric Point (pI)

33.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	60 - 389	4.5e-39	Receptor family ligand binding region
Peripla_BP_6	PF13458	88 - 351	7.7e-15	Periplasmic binding protein
Lig_chan-Glu_bd	PF10613	468 - 550	1.7e-06	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	473 - 782	2.8e-11	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	563 - 813	4.3e-30	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1676, 1886
Acc36I	ACCTGC	1 cut(s)	1568
AccB1I	GGYRCC	1 cut(s)	1802
AccB7I	CCANNNNNTGG	2 cut(s)	1211, 1314
AccI	GTMKAC	1 cut(s)	1725
AccII	CGCG	1 cut(s)	477
AciI	CCGC	4 cut(s)	1703, 1806, 1929, 2211
AclI	AACGTT	1 cut(s)	122
AclWI	GGATC	3 cut(s)	232, 260, 1160
AcoI	YGGCCR	1 cut(s)	446
AcsI	RAATTY	6 cut(s)	935, 978, 1598, 1772, 2102, 2407
AcuI	CTGAAG	6 cut(s)	123, 719, 1043, 1357, 2501, 2727
AfaI	GTAC	7 cut(s)	518, 874, 1270, 1332, 1572, 2061, 2111
AfiI	CCNNNNNNNGG	6 cut(s)	674, 1211, 1314, 1421, 1812, 2677
AflII	CTTAAG	1 cut(s)	2318
AhlI	ACTAGT	1 cut(s)	1525
AjnI	CCWGG	7 cut(s)	546, 973, 1204, 1357, 1688, 2271, 2499
AjuI	GAANNNNNNNTTGG	6 cut(s)	325, 357, 637, 669, 933, 965
Alw21I	GWGCWC	2 cut(s)	385, 2608
Alw26I	GTCTC	4 cut(s)	332, 795, 852, 1463
AlwI	GGATC	3 cut(s)	232, 260, 1160
Ama87I	CYCGRG	4 cut(s)	717, 842, 1872, 2643
AoxI	GGCC	7 cut(s)	446, 787, 1023, 1280, 2286, 2416, 2685
ApeKI	GCWGC	7 cut(s)	52, 278, 287, 353, 407, 752, 2144
ApoI	RAATTY	6 cut(s)	935, 978, 1598, 1772, 2102, 2407
AseI	ATTAAT	1 cut(s)	1907
AsiSI	GCGATCGC	1 cut(s)	475
Asp700I	GAANNNNTTC	2 cut(s)	122, 935
AspA2I	CCTAGG	1 cut(s)	2512
AspLEI	GCGC	3 cut(s)	479, 1379, 1758
AspS9I	GGNCC	5 cut(s)	787, 1202, 1281, 1781, 2416
AsuC2I	CCSGG	1 cut(s)	1284
AsuNHI	GCTAGC	1 cut(s)	580
AvaI	CYCGRG	4 cut(s)	717, 842, 1872, 2643
AvaII	GGWCC	2 cut(s)	1202, 1781
AvrII	CCTAGG	1 cut(s)	2512
AxyI	CCTNAGG	1 cut(s)	2673
BaeI	ACNNNNGTAYC	2 cut(s)	1260, 1293
BalI	TGGCCA	1 cut(s)	448
BanI	GGYRCC	1 cut(s)	1802
BanII	GRGCYC	4 cut(s)	385, 1306, 2261, 2608
BbsI	GAAGAC	1 cut(s)	1040
Bbv12I	GWGCWC	2 cut(s)	385, 2608
BbvI	GCAGC	7 cut(s)	39, 265, 274, 365, 419, 764, 2131
BccI	CCATC	7 cut(s)	86, 548, 778, 1961, 2018, 2303, 2480
BceAI	ACGGC	1 cut(s)	1478
BciT130I	CCWGG	7 cut(s)	548, 975, 1206, 1359, 1690, 2273, 2501
BclI	TGATCA	1 cut(s)	2658
BcnI	CCSGG	1 cut(s)	1284
BcoDI	GTCTC	4 cut(s)	332, 795, 852, 1463
BcuI	ACTAGT	1 cut(s)	1525
BfaI	CTAG	9 cut(s)	359, 581, 669, 683, 1454, 1526, 1574, 2237, 2513
BfmI	CTRYAG	1 cut(s)	2221
BfoI	RGCGCY	1 cut(s)	1759
BfrI	CTTAAG	1 cut(s)	2318
BfuAI	ACCTGC	1 cut(s)	1568
BisI	GCNGC	8 cut(s)	53, 279, 288, 354, 408, 753, 1704, 2145
BlnI	CCTAGG	1 cut(s)	2512
BlsI	GCNGC	8 cut(s)	54, 280, 289, 355, 409, 754, 1705, 2146
Bme1390I	CCNGG	8 cut(s)	548, 975, 1206, 1284, 1359, 1690, 2273, 2501
Bme18I	GGWCC	2 cut(s)	1202, 1781
BmeT110I	CYCGRG	4 cut(s)	717, 842, 1872, 2643
BmgT120I	GGNCC	5 cut(s)	787, 1202, 1281, 1781, 2416
BmiI	GGNNCC	4 cut(s)	377, 1203, 1356, 1804
BmrFI	CCNGG	8 cut(s)	548, 975, 1206, 1284, 1359, 1690, 2273, 2501
BmsI	GCATC	4 cut(s)	39, 567, 637, 1537
BmtI	GCTAGC	1 cut(s)	584
BpiI	GAAGAC	1 cut(s)	1040
BpmI	CTGGAG	2 cut(s)	1772, 2324
BpuEI	CTTGAG	4 cut(s)	369, 834, 1903, 2416
BpuMI	CCSGG	1 cut(s)	1284
BsaI	GGTCTC	1 cut(s)	1463
BsaJI	CCNNGG	7 cut(s)	270, 594, 644, 1205, 2271, 2283, 2512
BsaWI	WCCGGW	2 cut(s)	391, 2432
BsaXI	ACNNNNNCTCC	4 cut(s)	129, 159, 1745, 1775
Bsc4I	CCNNNNNNNGG	6 cut(s)	674, 1211, 1314, 1421, 1812, 2677
Bse1I	ACTGG	2 cut(s)	449, 2307
Bse21I	CCTNAGG	1 cut(s)	2673
Bse3DI	GCAATG	2 cut(s)	495, 1326
BseBI	CCWGG	7 cut(s)	548, 975, 1206, 1359, 1690, 2273, 2501
BseDI	CCNNGG	7 cut(s)	270, 594, 644, 1205, 2271, 2283, 2512
BseGI	GGATG	8 cut(s)	54, 556, 582, 1674, 1953, 2029, 2062, 2314
BseLI	CCNNNNNNNGG	6 cut(s)	674, 1211, 1314, 1421, 1812, 2677
BseMI	GCAATG	2 cut(s)	495, 1326
BseMII	CTCAG	5 cut(s)	762, 819, 1619, 1856, 2687
BseNI	ACTGG	2 cut(s)	449, 2307
BseRI	GAGGAG	1 cut(s)	2663
BseXI	GCAGC	7 cut(s)	39, 265, 274, 365, 419, 764, 2131
BseYI	CCCAGC	1 cut(s)	1314
BsgI	GTGCAG	2 cut(s)	264, 2682
Bsh1236I	CGCG	1 cut(s)	477
Bsh1285I	CGRYCG	1 cut(s)	475
BshFI	GGCC	7 cut(s)	448, 789, 1025, 1282, 2288, 2418, 2687
BshNI	GGYRCC	1 cut(s)	1802
BsiEI	CGRYCG	1 cut(s)	475
BsiHKAI	GWGCWC	2 cut(s)	385, 2608
BsiHKCI	CYCGRG	4 cut(s)	717, 842, 1872, 2643
BsiSI	CCGG	3 cut(s)	392, 1284, 2433
BslFI	GGGAC	1 cut(s)	1215
BslI	CCNNNNNNNGG	6 cut(s)	674, 1211, 1314, 1421, 1812, 2677
BsmAI	GTCTC	4 cut(s)	332, 795, 852, 1463
BsmFI	GGGAC	1 cut(s)	1215
BsmI	GAATGC	2 cut(s)	1431, 2120
BsnI	GGCC	7 cut(s)	448, 789, 1025, 1282, 2288, 2418, 2687
Bso31I	GGTCTC	1 cut(s)	1463
BsoBI	CYCGRG	4 cut(s)	717, 842, 1872, 2643
Bsp1286I	GDGCHC	4 cut(s)	385, 1306, 2261, 2608
Bsp1407I	TGTACA	1 cut(s)	516
Bsp143I	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
BspACI	CCGC	4 cut(s)	1703, 1806, 1929, 2211
BspANI	GGCC	7 cut(s)	448, 789, 1025, 1282, 2288, 2418, 2687
BspCNI	CTCAG	5 cut(s)	761, 818, 1618, 1855, 2686
BspFNI	CGCG	1 cut(s)	477
BspHI	TCATGA	3 cut(s)	859, 1258, 2178
BspLI	GGNNCC	4 cut(s)	377, 1203, 1356, 1804
BspMI	ACCTGC	1 cut(s)	1568
BspOI	GCTAGC	1 cut(s)	584
BspPI	GGATC	3 cut(s)	232, 260, 1160
BspQI	GCTCTTC	2 cut(s)	606, 993
BspT107I	GGYRCC	1 cut(s)	1802
BspTI	CTTAAG	1 cut(s)	2318
BspTNI	GGTCTC	1 cut(s)	1463
BsrDI	GCAATG	2 cut(s)	495, 1326
BsrGI	TGTACA	1 cut(s)	516
BsrI	ACTGG	2 cut(s)	449, 2307
BssECI	CCNNGG	7 cut(s)	270, 594, 644, 1205, 2271, 2283, 2512
BssMI	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
BssT1I	CCWWGG	4 cut(s)	270, 644, 2283, 2512
Bst2UI	CCWGG	7 cut(s)	548, 975, 1206, 1359, 1690, 2273, 2501
Bst4CI	ACNGT	9 cut(s)	521, 908, 1078, 1273, 1330, 1424, 1570, 2360, 2551
Bst6I	CTCTTC	4 cut(s)	66, 606, 681, 993
BstAFI	CTTAAG	1 cut(s)	2318
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstAUI	TGTACA	1 cut(s)	516
BstC8I	GCNNGC	2 cut(s)	469, 582
BstDEI	CTNAG	5 cut(s)	748, 805, 1605, 1842, 2673
BstF5I	GGATG	8 cut(s)	54, 556, 582, 1674, 1953, 2029, 2062, 2314
BstFNI	CGCG	1 cut(s)	477
BstH2I	RGCGCY	1 cut(s)	1759
BstHHI	GCGC	3 cut(s)	479, 1379, 1758
BstKTI	GATC	8 cut(s)	240, 268, 475, 624, 995, 1155, 1516, 2661
BstMAI	GTCTC	4 cut(s)	332, 795, 852, 1463
BstMBI	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
BstMCI	CGRYCG	1 cut(s)	475
BstMWI	GCNNNNNNNGC	4 cut(s)	284, 287, 362, 1712
BstNI	CCWGG	7 cut(s)	548, 975, 1206, 1359, 1690, 2273, 2501
BstNSI	RCATGY	1 cut(s)	2657
BstSCI	CCNGG	8 cut(s)	546, 973, 1204, 1282, 1357, 1688, 2271, 2499
BstSFI	CTRYAG	1 cut(s)	2221
BstUI	CGCG	1 cut(s)	477
BstV1I	GCAGC	7 cut(s)	39, 265, 274, 365, 419, 764, 2131
BstV2I	GAAGAC	1 cut(s)	1040
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	1 cut(s)	554
BstYI	RGATCY	1 cut(s)	265
Bsu36I	CCTNAGG	1 cut(s)	2673
BsuRI	GGCC	7 cut(s)	448, 789, 1025, 1282, 2288, 2418, 2687
BtgZI	GCGATG	1 cut(s)	2112
BtsCI	GGATG	8 cut(s)	54, 556, 582, 1674, 1953, 2029, 2062, 2314
BtsIMutI	CAGTG	2 cut(s)	1083, 1783
BveI	ACCTGC	1 cut(s)	1568
Cac8I	GCNNGC	2 cut(s)	469, 582
CciI	TCATGA	3 cut(s)	859, 1258, 2178
CfoI	GCGC	3 cut(s)	479, 1379, 1758
Cfr13I	GGNCC	5 cut(s)	787, 1202, 1281, 1781, 2416
Csp6I	GTAC	7 cut(s)	517, 873, 1269, 1331, 1571, 2060, 2110
CviAII	CATG	8 cut(s)	95, 440, 860, 1259, 1490, 1665, 2179, 2654
CviQI	GTAC	7 cut(s)	517, 873, 1269, 1331, 1571, 2060, 2110
DdeI	CTNAG	5 cut(s)	748, 805, 1605, 1842, 2673
DpnI	GATC	8 cut(s)	239, 267, 474, 623, 994, 1154, 1515, 2660
DpnII	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
EaeI	YGGCCR	1 cut(s)	446
Eam1104I	CTCTTC	4 cut(s)	66, 606, 681, 993
EarI	CTCTTC	4 cut(s)	66, 606, 681, 993
Ecl136II	GAGCTC	2 cut(s)	383, 2606
Eco130I	CCWWGG	4 cut(s)	270, 644, 2283, 2512
Eco147I	AGGCCT	1 cut(s)	2687
Eco24I	GRGCYC	4 cut(s)	385, 1306, 2261, 2608
Eco31I	GGTCTC	1 cut(s)	1463
Eco47I	GGWCC	2 cut(s)	1202, 1781
Eco53kI	GAGCTC	2 cut(s)	383, 2606
Eco57I	CTGAAG	6 cut(s)	123, 719, 1043, 1357, 2501, 2727
Eco81I	CCTNAGG	1 cut(s)	2673
Eco88I	CYCGRG	4 cut(s)	717, 842, 1872, 2643
EcoICRI	GAGCTC	2 cut(s)	383, 2606
EcoRI	GAATTC	4 cut(s)	935, 1598, 1772, 2102
EcoRII	CCWGG	7 cut(s)	546, 973, 1204, 1357, 1688, 2271, 2499
EcoT14I	CCWWGG	4 cut(s)	270, 644, 2283, 2512
EcoT22I	ATGCAT	1 cut(s)	497
EcoT38I	GRGCYC	4 cut(s)	385, 1306, 2261, 2608
ErhI	CCWWGG	4 cut(s)	270, 644, 2283, 2512
FaeI	CATG	8 cut(s)	98, 443, 863, 1262, 1493, 1668, 2182, 2657
FalI	AAGNNNNNCTT	2 cut(s)	637, 669
FaqI	GGGAC	1 cut(s)	1215
FatI	CATG	8 cut(s)	94, 439, 859, 1258, 1489, 1664, 2178, 2653
FauNDI	CATATG	2 cut(s)	1089, 2164
FbaI	TGATCA	1 cut(s)	2658
FblI	GTMKAC	1 cut(s)	1725
Fnu4HI	GCNGC	8 cut(s)	53, 279, 288, 354, 408, 753, 1704, 2145
FokI	GGATG	8 cut(s)	61, 563, 589, 1681, 1940, 2036, 2069, 2321
FriOI	GRGCYC	4 cut(s)	385, 1306, 2261, 2608
Fsp4HI	GCNGC	8 cut(s)	53, 279, 288, 354, 408, 753, 1704, 2145
FspBI	CTAG	9 cut(s)	359, 581, 669, 683, 1454, 1526, 1574, 2237, 2513
GlaI	GCGC	3 cut(s)	478, 1378, 1757
GluI	GCNGC	8 cut(s)	53, 279, 288, 354, 408, 753, 1704, 2145
GsaI	CCCAGC	1 cut(s)	1318
GsuI	CTGGAG	2 cut(s)	1772, 2324
HaeII	RGCGCY	1 cut(s)	1759
HaeIII	GGCC	7 cut(s)	448, 789, 1025, 1282, 2288, 2418, 2687
HapII	CCGG	3 cut(s)	392, 1284, 2433
HhaI	GCGC	3 cut(s)	479, 1379, 1758
Hin1II	CATG	8 cut(s)	98, 443, 863, 1262, 1493, 1668, 2182, 2657
Hin6I	GCGC	3 cut(s)	477, 1377, 1756
HinP1I	GCGC	3 cut(s)	477, 1377, 1756
HincII	GTYRAC	1 cut(s)	2343
HindII	GTYRAC	1 cut(s)	2343
HindIII	AAGCTT	2 cut(s)	698, 2392
HpaII	CCGG	3 cut(s)	392, 1284, 2433
Hpy166II	GTNNAC	7 cut(s)	680, 1081, 1726, 1818, 2112, 2343, 2717
Hpy8I	GTNNAC	7 cut(s)	680, 1081, 1726, 1818, 2112, 2343, 2717
HpyCH4III	ACNGT	9 cut(s)	521, 908, 1078, 1273, 1330, 1424, 1570, 2360, 2551
HpyCH4IV	ACGT	1 cut(s)	122
HpyF10VI	GCNNNNNNNGC	4 cut(s)	284, 287, 362, 1712
HpyF3I	CTNAG	5 cut(s)	748, 805, 1605, 1842, 2673
HpySE526I	ACGT	1 cut(s)	122
Hsp92II	CATG	8 cut(s)	98, 443, 863, 1262, 1493, 1668, 2182, 2657
HspAI	GCGC	3 cut(s)	477, 1377, 1756
Ksp22I	TGATCA	1 cut(s)	2658
Kzo9I	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
LguI	GCTCTTC	2 cut(s)	606, 993
LmnI	GCTCC	3 cut(s)	1753, 2611, 2650
Lsp1109I	GCAGC	7 cut(s)	39, 265, 274, 365, 419, 764, 2131
LweI	GCATC	4 cut(s)	39, 567, 637, 1537
MaeI	CTAG	9 cut(s)	359, 581, 669, 683, 1454, 1526, 1574, 2237, 2513
MaeII	ACGT	1 cut(s)	122
MaeIII	GTNAC	3 cut(s)	1975, 2322, 2354
MalI	GATC	8 cut(s)	239, 267, 474, 623, 994, 1154, 1515, 2660
MboI	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
MfeI	CAATTG	1 cut(s)	2265
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	4 cut(s)	385, 1306, 2261, 2608
MlsI	TGGCCA	1 cut(s)	448
MluNI	TGGCCA	1 cut(s)	448
MlyI	GAGTC	4 cut(s)	797, 854, 893, 1628
MmeI	TCCRAC	5 cut(s)	310, 503, 1166, 1981, 2715
Mox20I	TGGCCA	1 cut(s)	448
Mph1103I	ATGCAT	1 cut(s)	497
MroXI	GAANNNNTTC	2 cut(s)	122, 935
MscI	TGGCCA	1 cut(s)	448
MseI	TTAA	9 cut(s)	27, 147, 1070, 1097, 1497, 1661, 1868, 1907, 2319
MslI	CAYNNNNRTG	1 cut(s)	1988
Msp20I	TGGCCA	1 cut(s)	448
MspCI	CTTAAG	1 cut(s)	2318
MspI	CCGG	3 cut(s)	392, 1284, 2433
MspR9I	CCNGG	8 cut(s)	548, 975, 1206, 1284, 1359, 1690, 2273, 2501
MunI	CAATTG	1 cut(s)	2265
Mva1269I	GAATGC	2 cut(s)	1431, 2120
MvaI	CCWGG	7 cut(s)	548, 975, 1206, 1359, 1690, 2273, 2501
MvnI	CGCG	1 cut(s)	477
MwoI	GCNNNNNNNGC	4 cut(s)	284, 287, 362, 1712
NciI	CCSGG	1 cut(s)	1284
NdeI	CATATG	2 cut(s)	1089, 2164
NdeII	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
NheI	GCTAGC	1 cut(s)	580
NlaIII	CATG	8 cut(s)	98, 443, 863, 1262, 1493, 1668, 2182, 2657
NlaIV	GGNNCC	4 cut(s)	377, 1203, 1356, 1804
NmuCI	GTSAC	2 cut(s)	2322, 2354
NsiI	ATGCAT	1 cut(s)	497
NspI	RCATGY	1 cut(s)	2657
PaeR7I	CTCGAG	2 cut(s)	842, 1872
PagI	TCATGA	3 cut(s)	859, 1258, 2178
PceI	AGGCCT	1 cut(s)	2687
PciSI	GCTCTTC	2 cut(s)	606, 993
PctI	GAATGC	2 cut(s)	1431, 2120
PdmI	GAANNNNTTC	2 cut(s)	122, 935
PfeI	GAWTC	9 cut(s)	141, 569, 882, 1215, 1394, 1792, 2030, 2350, 2565
PflMI	CCANNNNNTGG	2 cut(s)	1211, 1314
PkrI	GCNGC	8 cut(s)	54, 280, 289, 355, 409, 754, 1705, 2146
Ple19I	CGATCG	1 cut(s)	475
PleI	GAGTC	4 cut(s)	797, 853, 893, 1627
PpsI	GAGTC	4 cut(s)	797, 853, 893, 1627
PshBI	ATTAAT	1 cut(s)	1907
PsiI	TTATAA	2 cut(s)	1676, 1886
Psp124BI	GAGCTC	2 cut(s)	385, 2608
Psp1406I	AACGTT	1 cut(s)	122
Psp6I	CCWGG	7 cut(s)	546, 973, 1204, 1357, 1688, 2271, 2499
PspFI	CCCAGC	1 cut(s)	1314
PspGI	CCWGG	7 cut(s)	546, 973, 1204, 1357, 1688, 2271, 2499
PspN4I	GGNNCC	4 cut(s)	377, 1203, 1356, 1804
PspPI	GGNCC	5 cut(s)	787, 1202, 1281, 1781, 2416
PspXI	VCTCGAGB	2 cut(s)	842, 1872
PsuI	RGATCY	1 cut(s)	265
PvuI	CGATCG	1 cut(s)	475
RgaI	GCGATCGC	1 cut(s)	475
RsaI	GTAC	7 cut(s)	518, 874, 1270, 1332, 1572, 2061, 2111
RsaNI	GTAC	7 cut(s)	517, 873, 1269, 1331, 1571, 2060, 2110
RseI	CAYNNNNRTG	1 cut(s)	1988
SacI	GAGCTC	2 cut(s)	385, 2608
SapI	GCTCTTC	2 cut(s)	606, 993
SaqAI	TTAA	9 cut(s)	27, 147, 1070, 1097, 1497, 1661, 1868, 1907, 2319
SatI	GCNGC	8 cut(s)	53, 279, 288, 354, 408, 753, 1704, 2145
Sau3AI	GATC	8 cut(s)	237, 265, 472, 621, 992, 1152, 1513, 2658
Sau96I	GGNCC	5 cut(s)	787, 1202, 1281, 1781, 2416
SchI	GAGTC	4 cut(s)	797, 854, 893, 1628
ScrFI	CCNGG	8 cut(s)	548, 975, 1206, 1284, 1359, 1690, 2273, 2501
SduI	GDGCHC	4 cut(s)	385, 1306, 2261, 2608
SfaAI	GCGATCGC	1 cut(s)	475
SfaNI	GCATC	4 cut(s)	39, 567, 637, 1537
SfcI	CTRYAG	1 cut(s)	2221
Sfr274I	CTCGAG	2 cut(s)	842, 1872
SgfI	GCGATCGC	1 cut(s)	475
SinI	GGWCC	2 cut(s)	1202, 1781
SlaI	CTCGAG	2 cut(s)	842, 1872
SmiMI	CAYNNNNRTG	1 cut(s)	1988
SmlI	CTYRAG	7 cut(s)	384, 842, 849, 1872, 1918, 2318, 2395
SmoI	CTYRAG	7 cut(s)	384, 842, 849, 1872, 1918, 2318, 2395
SpeI	ACTAGT	1 cut(s)	1525
SseBI	AGGCCT	1 cut(s)	2687
SsiI	CCGC	4 cut(s)	1703, 1806, 1929, 2211
SspI	AATATT	1 cut(s)	1162
SspMI	CTAG	9 cut(s)	359, 581, 669, 683, 1454, 1526, 1574, 2237, 2513
SstI	GAGCTC	2 cut(s)	385, 2608
StuI	AGGCCT	1 cut(s)	2687
StyD4I	CCNGG	8 cut(s)	546, 973, 1204, 1282, 1357, 1688, 2271, 2499
StyI	CCWWGG	4 cut(s)	270, 644, 2283, 2512
TaaI	ACNGT	9 cut(s)	521, 908, 1078, 1273, 1330, 1424, 1570, 2360, 2551
TaiI	ACGT	1 cut(s)	125
TaqI	TCGA	9 cut(s)	250, 624, 843, 991, 1545, 1582, 1873, 1986, 2040
TatI	WGTACW	3 cut(s)	516, 2059, 2109
TauI	GCSGC	1 cut(s)	1706
TfiI	GAWTC	9 cut(s)	141, 569, 882, 1215, 1394, 1792, 2030, 2350, 2565
Tru1I	TTAA	9 cut(s)	27, 147, 1070, 1097, 1497, 1661, 1868, 1907, 2319
Tru9I	TTAA	9 cut(s)	27, 147, 1070, 1097, 1497, 1661, 1868, 1907, 2319
TscAI	CASTG	2 cut(s)	1083, 1783
TseFI	GTSAC	2 cut(s)	2322, 2354
TseI	GCWGC	7 cut(s)	52, 278, 287, 353, 407, 752, 2144
Tsp45I	GTSAC	2 cut(s)	2322, 2354
TspDTI	ATGAA	9 cut(s)	115, 390, 503, 715, 2115, 2167, 2195, 2544, 2715
TspGWI	ACGGA	1 cut(s)	215
TspRI	CASTG	2 cut(s)	1083, 1783
Van91I	CCANNNNNTGG	2 cut(s)	1211, 1314
Vha464I	CTTAAG	1 cut(s)	2318
VpaK11BI	GGWCC	2 cut(s)	1202, 1781
VspI	ATTAAT	1 cut(s)	1907
XapI	RAATTY	6 cut(s)	935, 978, 1598, 1772, 2102, 2407
XceI	RCATGY	1 cut(s)	2657
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1496
XhoI	CTCGAG	2 cut(s)	842, 1872
XmaJI	CCTAGG	1 cut(s)	2512
XmiI	GTMKAC	1 cut(s)	1725
XmnI	GAANNNNTTC	2 cut(s)	122, 935
XspI	CTAG	9 cut(s)	359, 581, 669, 683, 1454, 1526, 1574, 2237, 2513
Zsp2I	ATGCAT	1 cut(s)	497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.